These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10522#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1423 fasta sequence [ACCTTCTTTAATTCTTTCCCTCGTTTCTGTACTCTCCTGATGAAATCCTCTCTGAAAACCGTTGCAGGAGAGGAGTCTTCTTCTTCACTGAGGCAAGTTCTTGGCCGGAGACAAGAATGCCACCAGTGAATAGCGACGGAGCAGGACCAAGCTCCGGCGAGGATGGCTCTGCAGCCGCCGTGAAGAAGCGCAACAGGCCTAAGTACCATCGGTTTACGCAGCAAGAACTTCAAGCATGCAAGCCTATACTGATACCCCAGACTGTTATTCTTGTACTAGTGTTTGTGGGCCTAATTTTCATTCCAATTGGTCTTGCTTGCATTGCAGCCTCAAATAAGGTCGTTGAATTGGTTGATCGTTACGATACAAAATGCGTGCCACGGAACATGCTTCGCAACAAAGTTGCTTTTATCCAAAACTCATCAATAGATAAGACTTGCACAAGAGTCTTCAAGGTCCCTAAAGATATGAAGAAGCCGATTTACATATATTATCAACTTGACAAGTTCTACCAGAACCACAGAAGGTATGTGAAGAGCCTCAACGATATGCAGCTGAGAAATCCGAAGAAGGTGGCCGACACGCAATACTGCAGCCCTGAAGCTACTGCGAATGGCAGACCTATTGTT-CCTTGTGGTCTCATAGCTTGGAGCCTGTTCAACGACACATACAGCTTCACTCGTGGTCATGGCAACGAGACATTGAGAGTGAACAAGGATGGCATTTCGTGGAAGAGTGAAAGGAATCGCAGATTTGGCAAGAACGTGTATCCTAAAAACTTTCAGAATGGGACTTTGATTGGTGGAGGGCAGTTAAATCCAAGCAAACCTCTGAGTGAGCAGGAAGATCTGATCGTCTGGATGAGAATAGCAGCACTGCCAACATTCAGAAAGCTGTACGGGAGAATCGACATGGATCTGCAGGCCGGTGACCGTGTAGAGGTGACGATGCAGAACAACTACAACTCGTACAGCTTCAACGGCAAGAAGTCGCTGGTGCTGTCCACCGCCGGGTGGCTCGGAGGGAAGAACGCCTTCCTCGGCCGCGCCTACGCCATCGTCGGCTTGGCCTGCTTCCTGCTGGCACTGCTGCTCGCATTGCTCTACTTCGTCTTCCCCATGAGAGAGGAGCATCTGTCGCTGCACTACACTCCTGCTCGACTTGTACGATGATTGAGCAGTTGGGCATGGAATGTTATGGATCTTTTTGGACCATGGATTTTGGGAATCATTTCTTAGTTGTTCTGTATATATACGATAAATGTTAGACAGGCTATACTACTACTATGTGTACATATGTGTTATCTGTAAGGCTGTAATTGAACTTGCTTGTGATGTACTAGTTCAAACTTCAAACATGTTCTTTTAGGAATAC-ATGATTCAGACATGGTTGCTGAAAGAATTTTTTAATACAGTGAGTGCTG] [+] EMBL AK070937 [ACCTTCTTTAATTCTTTCCCTCGTTTCTGTACTCTCCTGATGAAATCCTCTCTGAAAACCGTTGCAGGAGAGGAGTCTTCTTCTTCACTGAGGCAAGTTCTTGGCCGGAGACAAGAATGCCACCAGTGAATAGCGACGGAGCAGGACCAAGCTCCGGCGAGGATGGCTCTGCAGCCGCCGTGAAGAAGCGCAACAGGCCTAAGTACCATCGGTTTACGCAGCAAGAACTTCAAGCATGCAAGCCTATACTGATACCCCAGACTGTTATTCTTGTACTAGTGTTTGTGGGCCTAATTTTCATTCCAATTGGTCTTGCTTGCATTGCAGCCTCAAATAAGGTCGTTGAATTGGTTGATCGTTACGATACAAAATGCGTGCCACGGAACATGCTTCGCAACAAAGTTGCTTTTATCCAAAACTCATCAATAGATAAGACTTGCACAAGAGTCTTCAAGGTCCCTAAAGATATGAAGAAGCCGATTTACATATATTATCAACTTGACAAGTTCTACCAGAACCACAGAAGGTATGTGAAGAGCCTCAACGATATGCAGCTGAGAAATCCGAAGAAGGTGGCCGACACGCAATACTGCAGCCCTGAAGCTACTGCGAATGGCAGACCTATTGTT CCTTGTGGTCTCATAGCTTGGAGCCTGTTCAACGACACATACAGCTTCACTCGTGGTCATGGCAACGAGACATTGAGAGTGAACAAGGATGGCATTTCGTGGAAGAGTGAAAGGAATCGCAGATTTGGCAAGAACGTGTATCCTAAAAACTTTCAGAATGGGACTTTGATTGGTGGAGGGCAGTTAAATCCAAGCAAACCTCTGAGTGAGCAGGAAGATCTGATCGTCTGGATGAGAATAGCAGCACTGCCAACATTCAGAAAGCTGTACGGGAGAATCGACATGGATCTGCAGGCCGGTGACCGTGTAGAGGTGACGATGCAGAACAACTACAACTCGTACAGCTTCAACGGCAAGAAGTCGCTGGTGCTGTCCACCGCCGGGTGGCTCGGAGGGAAGAACGCCTTCCTCGGCCGCGCCTACGCCATCGTCGGCTTGGCCTGCTTCCTGCTGGCACTGCTGCTCGCATTGCTCTACTTCGTCTTCCCCATGAGAGAGGAGCATCTGTCGCTGCACTACACTCCTGCTCGACTTGTACGATGATTGAGCAGTTGGGCATGGAATGTTATGGATCTTTTTGGACCATGGATTTTGGGAATCATTTCTTAGTTGTTCTGTATATATACGATAAATGTTAGACAGGCTATACTACTACTATGTGTACATATGTGTTATCTGTAAGGCTGTAATTGAACTTGCTTGTGATGTACTAGTTCAAACTTCAAACATGTTCTTTTAGGAATAC ATGATTCAGACATGGTTGCTGAAAGAATTTTTTAATACAGTGAGTGCTG] [+] EMBL CB655865 [ GTTTCTGTACTCTCCTGATGAAATCCTCTCTGAAAACCGTTGCAGGAGAGGAGTCTTCTTCTTCACTGAGGCAAGTTCTTGGCCGGAGACAAGAATGCCACCAGTGAATAGCGACGGAGCAGGACCAAGCTCCGGCGAGGATGGCTCTGCAGCCGCCGTGAAGAAGCGCAACAGGCCTAAGTACCATCGGTTTACGCAGCAAGAACTTCAAGCATGCAAGCCTATACTGATACCCCAGACTGTTATTCTTGTACTAGTGTTTGTGGGCCTAATTTTCATTCCAATTGGTCTTGCTTGCATTGCAGCCTCAAATAAGGTCGTTGAATTGGTTGATCGTTACGATACAAAATGCGTGCCACGGAACATGCTTCGCAACAAAGTTGCTTTTATCCAAAACTCATCAATAGATAAGACTTGCACAAGAGTCTTCAAGGTCCCTAAAGATATGAAGAAGCCGATTTACATATATTATCAACTTGACAAGTTCTACCAGAACCACAGAAGGTATGTGAAGAGCCTCAACGATATGCAGCTGAGAAATCCGAAGAAGGTGGCCGACACGCAATACTGCAGCCCTGAAGCTACTGCGAATGGCAGACCTATTGTT CCTTGTGGTCTCATAGCTTGGAGCCTGTTCAACGACACATACAGCTTCACTCGTGGTCATGGCAACGAGACATTGAGAGTGAACAAGGATGGCATTTCGTGGAAGAGTGAAAGGAATCGCAGATTTGGCAAGAACGTGTATCCTAAAAACTTTCAGAATGGGACTTTGATTGGTGGAGGGCAGTTAAATCCAAGCAAACCTTTGAGTGAGCAGGAAGAT ] [+] EMBL CB657460 [ TCTTCTTCTTCACTGAGGCAAGTTCTTGGCCGGAGACAAGAATGCCACCAGTGAATAGCGACGGAGCAGGACCAAGCTCCGGCGAGGATGGCTCTGCAGCCGCCGTGAAGAAGCGCAACAGGCCTAAGTACCATCGGTTTACGCAGCAAGAACTTCAAGCATGCAAGCCTATACTGATACCCCAGACTGTTATTCTTGTACTAGTGTTTGTGGGCCTAATTTTCATTCCAATTGGTCTTGCTTGCATTGCAGCCTCAAATAAGGTCGTTGAATTGGTTGATCGTTACGATACAAAATGCGTGCCACGGAACATGCTTCGCAACAAAGTTGCTTTTATCCAAAACTCATCAATAGATAAGACTTGCACAAGAGTCTTCAAGGTCCCTAAAGATATGAAGAAGCCGATTTACATATATTATCAACTTGACAAGTTCTACCAGAACCACAGAAGGTATGTGAAGAGCCTCAACGATATGCAGCTGAGAAATCCGAAGAAGGTGGCCGACACGCAATACTGCAGCCCTGAAGCTACTGCGAATGGCAGACCTATTGTT CCTTGTGGTCTCATAGCTTGGAGCCTGTTCAACGACACATACAGCTTCACTCGTGGTCATGGCAACGAGACATTGAGAGTGAACAAGGATGGCATTTCGTGGAAGAGTGAAAGGAATCGCAGATTTGGCAAGAACGTGTATCCTAAAAACTTTCAGAATGGGACTTTGATTGGTGGAGGGCAGTTAAATCCAAGCAAACCTCTGAGTGAGCANGAAGATCTGAT ] [-] EMBL CB655866 [ AGCTACTGCGAATGGCAGACCTA TGTTCCCTTGTGGTCTCATAGCTTGGAGCCTGTTCAACGACACATACAGCTTCACTCGTGGTCATGGCAACGAGACATTGAGAGTGAACAAGGATGGCATTTCGTGGAAGAGTGAAAGGAATCGCAGATTTGGCAAGAACGTGTATCCTAAAAACTTTCAGAATGGGACTTTGATTGGTGGAGGGCAGTTAAATCCAAGCAAACCTTTGAGTGAGCAGGAAGATCTGATCGTCTGGATGAGAATAGCAGCACTGCCAACATTCAGAAAGCTGTACGGGAGAATCGACATGGATCTGCAGGCCGGTGACCGTGTAGAGGTGACGATGCAGAACAACTACAACTCGTACAGCTTCAACGGCAAGAAGTCGCTGGTGCTGTCCACCGCCGGGTGGCTCGGAGGGAAGAACGCCTTCCTCGGCCGCGCCTACGCCATCGTCGGCTTGGCCTGCTTCCTGCTGGCACTGCTGCTCGCATTGCTCTACTTCGTCTTCCCCATGAGAGAGGAGCATCTGTCGCTGCACTACACTCCTGCTCGACTTGTACGATGATTGAGCAGTTGGGCATGGAATGTTATGGATCTTTTTGGACCATGGATTTTGGGAATCATTTCTTAGTTGTTCTGTATATATACGATAAATGTTAGACAGGCTATACTACTACTATGTGTACATATGTGTTATCTGTAAGGCTGTAATTGAACTTGCTTGTGATGTACTAGTTCAAACTTCAAACATGTTCTTTTAGGAATACGAGGATTCAGACATGGTTGCTGAAAGAATTTT ] [-] EMBL CB657461 [ AGCCTGTTCAACGACACATACAGCTTCACTCGTGGTCATGGCAACGAGACATTGAGAGTGAACAAGGATGGCATTTCGTGGAAGAGTGAAAGGAATCGCAGATTTGGCAAGAACGTGTATCCTAAAAACTTTCAGAATGGGACTTTGATTGGTGGAGGGCAGTTAAATCCAAGCAAACCTCTGAGTGAGCAGGAAGATCTGATCGTCTGGATGAGAATAGCAGCACTGCCAACATTCAGAAAGCTGTACGGGAGAATCGACATGGATCTGCAGGCCGGTGACCGTGTAGAGGTGACGATGCAGAACAACTACAACTCGTACAGCTTCAACGGCAAGAAGTCGCTGGTGCTGTCCACCGCCGGGTGGCTCGGAGGGAAGAACGCCTTCCTCGGCCGCGCCTACGCCATCGTCGGCTTGGCCTGCTTCCTGCTGGCACTGCTGCTCGCATTGCTCTACTTCGTCTTCCCCATGAGAGAGGAGCATCTGTCGCTGCACTACACTCCTGCTCGACTTGTACGATGATTGAGCAGTTGGGCATGGAATGTTATGGATCTTTTTGGACCATGGATTTTGGGAATCATTTCTTAGTTGTTCTGTATATATACGATAAATGTTAGACAGGCTATACTACTACTATGTGTACATATGTGTTATCTGTAAGGCTGTAATTGAACTTGCTTGTGATGTACTAGTTCAAACTTCAAACATGTTCTTTTAGGAATAC ATGATTCAGACATGGTTGCTGAA ] [-] EMBL CA763759 [ ATCGCAGATTGGGCAAGAACGTGTATCCCAAAAACTTTCAGAATGGGACTCTGATTGGTGGAGGGCAGTTAAATCCAAGCAAACCTCTGAGTGAGCAGGAAGATCTGATTGTCTGGATGAGAATAGCAGCCCTGCCAACATTCAGAAAACTGTACGGGAGAATCGACATGGATTTGCAGGCCGGCGACCGTGTAGAGGTGACGATGCAGAACAACTACAACTTGTACAGCTTTAACGGCAAGAAGTCGCTGGTGCTGTCCACCGCCGGGTGGCTTGGAGGGAAGAACGCCTTCCTCGGCCGCGCCTACGCCATTGTCGGCTTGGCCTGCTTCCTGCTGGCACTGCTGCTCGCATTGCTTTACTTTGTCTTCCCCATGAGAGAGGAGCATCTGTCGCTGCACTACACTCCTGCTCGACTTGTACGATGATTGAGCAGTTGGGCATGGAATGTTATGGATCTTTTTGGACCATGGATTTTGGGAATCATTTTTTAGTTGTTCTGTATATATACGATAAATGGTAGACAGGCTATACTAATACTATGTGTACATATGTGTTATCTGTAAGGCTGTAACTGAACTTGCTTGTGATGTACTAGTTCAAACTTCAAACATGTTCTTTTAGGAATAC ATGATTCAGACATGGTTGCTGAAAAAAaaaaaaa ] [+] EMBL CA765858 [ TAGACAGGCTATACTACTACTATGTGTACATATGTGTTATCTGTAAGGCTGTAACTGAACTTGCTTGTGATGTACTAGTTCAAACTTCAAACAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||