cluster # 10527

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10527 cluster # 10527 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10527#0 length = 676 sequences # 7
consensusID : consensus_10527#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 676
fasta sequence
                              [CGAGCTCCGTGTTCTTCCCTACTGTGGCCACGGCTTTCACGTGGCCTGCATAGATATTTGGGTAGGGCACCATTCAACATGCCCAGTTTGGTAGAATTTCGTTGTGCGACTACCCTGATAGCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTCCTGAAGCATCAAGATCAGATCAATGCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAAGGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCACCGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGACCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCA-GGTGA-AACTACCTGTAATATTAGAAACATC-GACACA-GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA-AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AA752457             [CGAGCTCCGTGTTCTTCCCTACTGTGGCCACGGCTTTCACGTGGCCTGCATAGATATTTGGGTAGGGCACCATTCAACATGCCCAGTTTGGTAGAATTTCGTTGTGCGACTACCCTGATAGCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTCCTGAAGCATCAAGATCAGATCAATGCAATTGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSAA31819            [                                                                                                        TGCGACTACCCTGATAGCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTCCTGAAGCATCAAGATCAGATCAATGCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAAGGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCACCGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGA                                                                                                                                                                                                                                                                     ]
[+] EMBL AK062909             [                                                                                                                                                                                                            GCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAAGGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCACCGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGACCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCA GGTGA AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTT                                                                          ]
[+] EMBL AU197487             [                                                                                                                                                                                                                                                                                                                         GAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGACCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCA GGTGA AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA              ]
[+] EMBL BI795976             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATTTCTGCTGTTCTGTCTGCTCTCTGCCACGGTGAGAACTACCTGGAATATTAGAAACATCTGACACACGGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGTTTTTGATGTATAATATGAGAAACCGTTCAGGTTTCTTGTTAAGAAAACCACCTTTGTTTGTCATCATATTCAAGATCCCCTTGTATTCCAAAAAAAAA                               ]
[+] EMBL CF327565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGTCTGCTCTCTGCCA GGTGA AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL OSAA31820            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGTTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTTAAGAAAACCACATTTGTTTGTCATCATATT                                                           ]




>consensus_10527#0
CGAGCTCCGTGTTCTTCCCTACTGTGGCCACGGCTTTCACGTGGCCTGCATAGATATTTG
GGTAGGGCACCATTCAACATGCCCAGTTTGGTAGAATTTCGTTGTGCGACTACCCTGATA
GCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTC
CTGAAGCATCAAGATCAGATCAATGCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAA
GGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCAC
CGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAAC
AACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGA
CCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCAGGTGAAACTA
CCTGTAATATTAGAAACATCGACACAGGGGGATCCGTGGATTGCTGTCATAGGTTAGTTT
TGGAGCGGTTTTGATGTAAATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACAT
TTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case