These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10568#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3639 fasta sequence [GCCATTTAGCGGAATGGCGTTGTGGCGAACCCACTCTCGGCAGTAGCAGAATTTCCAATTTNTCGGCAAAANACGCAG-CCATGGCCAACGCCCACGCNAGCACCAGGGCTCCCGCGCCGCCGCCTCATCCACCGATGCTTCTTCGGCCGCCGCCGCAGCCCAGGGCGGCGCCGTTGCG-CCCCGCNGCCTCCNTCGTCCGCCGATAGGC-ANCCCCGCAGCCCGGAGACGGAGGCCGCACCGACGGNTCGAGCTCCGNCGCTGCGGCGCCTGATCGGANGGGAAAGAAGCCGATGTCGGCGTCTNATGATCGGAAACAGGCGCGAAGGAAGGAGAAGAGGAAATCTGGTTACCCGAAAGAGAAGTTTCTCGA-AATAGAATGCGTTCGTATCAAGGCCCCGCCAAGGAGGAGGTAAGGAGAAGTTTTACTTTTCATTCTTGACTGGCCTGGGGCTGAGCGTTCTTGTGCCATCTTCCGTGTTGGGATCTTTGGACTTGGATCCTGTAGTTCGTGTGAAATCTTGGGATTATCTTGCATCGATGCATAGGCGCAATCTTGTTGCTTAGGCACGGTTCTTGTGTCAGTTTGTATGTTGGAATGGTGGAGCTAGGAGCTTGGCATTCTTGATTTCTATTTAACCATGGTTGATTTTACTGTGCTTCAGCGAAGAAATCTTGGATGGAATTTTATGGTATCCTAGAACAGAGTTGAAATCAACTAGGCCTTATGACAGATAAAAAAAAAAAAAACCAGGCACATGTTAGGGTGCCAATTCAGCTTTCTGTATGTATAGCGAGTAAACTGGTTCTTTCTTGATATCTTCTTATGGCACTTGGATAAAAGAACGGCCTCCTTTCCTGTCGAAATTGTTGAGACTTAGTTGCTCCTGCTTGCGTTAATGGATTTGCTTTTTAATGCGATGCATTTTTATCGCACTGTAACAATGGGTGTGTGTGTGTGTGTAACAATGTGGTGTTAGTAGGTGATGTCATGCCTGCCGTGATATTTTGGTAAGAAATCCTCAAGCCAAATTTATGAGCTTTCATTGTCATTGAATGGTTCATCCATATGTGCATTTGGGAATTGGGATTGCATCACTAGGATCGTTTTTCTAAATTATTGACCCCTTACTTGGAAAATCACTTGGCACACTCTACTGTTCGGTCTAAAATATTCAACATTTGGTTGGTTACTAGCCAAAATTGGCTTGATAGCTCGACGCATAATTGGCAAGAGTAGACAAACTGCAGACACCAGTTTTGTGATTTTGCTAATCAGTTCTTAAAAATCTTCATTCATCCCCTATTTCTTTGTTTCCTACTGTGAAATGTTTGATATTGATATTACTTCCCTGTAATTGGGTTTAAGTCTGGTAATATGTACGGATTGTAACTTGTATTGTTGTGGAATAGCCTTTGGATAAAAAAGGAAGGTGGACGTGGTGACACGCTATCCAATTGAAATTCCACAAAAAGAATATACTCACAATTGTCACTTCACGAGGATCACCAGATTTGACTCCTTTTAACCTTTGATAATGTTGAAAATGGGCATATAAATTATGACTAATGTGATATCATAGTAAGAAATCCTAAAGCCAGACGTATGAGATTTCTGTGTTATCAGACAGTGTTATAAGGAAAATTTTGTCGGTATGTGTATTTGGGATTTTGCATCACTGGACATGATTTCTCTAAATCATAGGCTTCCAAACTCACCCTAGTGTTCGGTCTAAAATATTCAGGCTTCTGCTGGGTTGCTGCCTAGAATTGTATCAGAAGACCCATAGTTCAATTAGTAAAGAGTTGACAAATTGTCAAAGCACCAGTTCTGCTAGCCTGTTATTTAACCTTGTTTTTAGAATACCATGTATCCCTATTCAACCTTGTTTCCTCGTCTGAAATTTTTAGCCCTTATATTAATTCTCTGCGTTGCCCTCTTGTAAATAGCATTCAGACAGAGAAGGAGAACAACCGAACTCTCCCAGTCAAAATTCCAGATCTAGCATGTCAAAATCTTTTCCTCAGGTGTTTCACAAGAAACTTCCTATGGGAGACGCCGTGTATTATTATTTCAAGGACATCTATGATGCTCTTCGGATAGCACAAGTTGGTGTACGTTTGATATTTCTTGATCATGATTATTCAGAATTTAGGCCGGTTGTTCCAGATGAGGAGTGCTTCTATAGGAGTTTCATATTTTCCTATCTGGAGCAAGTTGTTGATAGGATAGACACACTTTGGGAAGACCGCCTTCTTGCTGCTCTTAGAGAATTGGATAGACGAGCTGAACGTTTTCAGCGGGCCTCTGAATTTTCCCGGAGACGAGATGCACACCGTTGTTACACAATAGTGGCATGACATCGCAGTGTTAATTCTAACAAATTTGTGTAGTTAATTACCTGATTGAACAAATATTCAACCTTGCAAAAAAATTTTGCAGTTGCACAGTACTAGTAAAGAATACAATGGAGACAAACAAAGTTATATGTGTCTTACGTTGATGACTGAAATGCTGTACACATGCTCCTTCATGGTGTGGCCATCTGATCCTAAGTCTTCCTTCTTACTACTATCTCATCAAATATTATTTCGAATGATTATCTTCATACTTGTACTTTAACTATGGAAGCTTCTCAGGCGAGTTATGCTAGTCATGTTTGTTCATATCCAATTATTGATGATCAGCATTCTGTAAGCGCCATTGTAAGATGCTGGTAACTCTTTGGTTGATAGATGCCAGCTGTATGCAATGATTTATTGTATCATTGATTCTTGCAGGTATTTGTGAAGCTGATTGCGAAAATAAAGGGATGGAAGCGCATGCGGGATTACCCACCGTCAAGAGTCAGCTACAGCAGCGTGGAATTTCTCCTCGAGTTCTTCAGCAGTTATGATTCAACGAATGACATTTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATTTGCACGCACAAAGGGAGATATGGACAGCATGTAAGAGAAGGTCAAAGTCCGGAAGATTGGTGCTCGATGCTGGTTATTCCTCCCCATGCGCCGGAAGACCGGATCATACCAATAGCCTTAGCGGAAGCACTACAATGATGGAACTAGTCTAGATACGCACTACAATGTTGCCCGTGGCACACCCCGAGTGAGCTTGCTGCTCATAGAGTCTAGATATGGCATCATCTACGCACTCCCTCCTAGTGCTGCTACTCCTACTAGCCGTCCAAATCAGCCAAGGCCTGATCCTGTGGCGAGACCGGGATTCTGGTGGTTCGATTGCTGCATTGTTGTTCCCAAGGAGAGCCTCTTGCAAGGCAGCACGGCCTAGCCGGTCACCAGCTACAGAGCAGGCCAAGCAAATCCTGCACTGACTCTTCGAGAGTTCAAGGCAAGGGGCAGTCTTCAACTGATGAAGCTCTAGTTAGCACCTGGGTTGATGATGAATGTATACAGGCCATCATAATCTGTTGTCCTGTGAGGAGTAGGAACGTAAACATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTCGATCGATCTTTGACATGGCTTTGTTGCCCCCCACAGGATTTTGATGTGTAGATAAATGTGATCAGATGAATCCAAGGTATTGCGGTTTTCGTTTCTGGTCGATTTCCATGTGTGGAGTTG] [+] EMBL AU068800 [GCCATTTAGCGGAATGGCGTTGTGGCGAACCCACTCTCGGCAGTAGCAGAATTTCCAATTTNTCGGCAAAANACGCAG CCATGGCCAACGCCCACGCNAGCACCAGGGCTCCCGCGCCGCCGCCTCATCCACCGATGCTTCTTCGGCCGCCGCCGCAGCCCAGGGCGGCGCCGTTGCG CCCCGCNGCCTCCNTCGTCCGCCGATAGGC ANCCCCGCAGCCCGGAGACGGAGGCCGCACCGACGGNTCGAGCTCCGNCGCTGCGGCGCCTGATCGGANGGGAAAGAAGCCGATGTCGGCGTCTNATGATCGGAAACAGGCGCGAAGGAAGGAGAAGAGGAAATCTGGTTACCCGAAAGAGAAGTTTCTCGA AATAGA ] [+] EMBL AK069352 [ TTTCTCGGCAAAAGACGCAGTCCATGGCCAACGCCCACGCGAGCACCAGGGCTCCCGCGCCGCCGCCTCATCCACCGATGCTTCTTCGGCCGCCGCCGCAGCCCAGGGCGGCGCCGTTGCGCCCCCGCCGCCTCCCTCGTCCGCCGATAGGCGCACCCCGCAGCCCGGAGACGGAGGCCGCACCGACGGATCGAGCTCCGCCGCTGCGGCGGCCGATCGGAAGGGAAAGAAGCCGATGTCGGCGTCTGATGATCGGAAACAGGCGCGAAGGAAGGAGAAGAGGAAATCTGGTTACCCGAAAGAGAAGTTGCTCGAGAGTAGCATGCGTTCGTATCAAGGCCCCGCCAAGGAGGAGGTAAGGAGAAGTTTTACTTTTCATTCTTGACTGGCCTGGGGCTGAGCGTTCTTGTGCCATCTTCCGTGTTGGGATCTTTGGACTTGGATCCTGTAGTTCGTGTGAAATCTTGGGATTATCTTGCATCGATGCATAGGCGCAATCTTGTTGCTTAGGCACGGTTCTTGTGTCAGTTTGTATGTTGGAATGGTGGAGCTAGGAGCTTGGCATTCTTGATTTCTATTTAACCATGGTTGATTTTACTGTGCTTCAGCGAAGAAATCTTGGATGGAATTTTATGGTATCCTAGAACAGAGTTGAAATCAACTAGGCCTTATGACAGATAAAAAAAAAAAAAACCAGGCACATGTTAGGGTGCCAATTCAGCTTTCTGTATGTATAGCGAGTAAACTGGTTCTTTCTTGATATCTTCTTATGGCACTTGGATAAAAGAACGGCCTCCTTTCCTGTCGAAATTGTTGAGACTTAGTTGCTCCTGCTTGCGTTAATGGATTTGCTTTTTAATGCGATGCATTTTTATCGCACTGTAACAATGGGTGTGTGTGTGTGTGTAACAATGTGGTGTTAGTAGGTGATGTCATGCCTGCCGTGATATTTTGGTAAGAAATCCTCAAGCCAAATTTATGAGCTTTCATTGTCATTGAATGGTTCATCCATATGTGCATTTGGGAATTGGGATTGCATCACTAGGATCGTTTTTCTAAATTATTGACCCCTTACTTGGAAAATCACTTGGCACACTCTACTGTTCGGTCTAAAATATTCAACATTTGGTTGGTTACTAGCCAAAATTGGCTTGATAGCTCGACGCATAATTGGCAAGAGTAGACAAACTGCAGACACCAGTTTTGTGATTTTGCTAATCAGTTCTTAAAAATCTTCATTCATCCCCTATTTCTTTGTTTCCTACTGTGAAATGTTTGATATTGATATTACTTCCCTGTAATTGGGTTTAAGTCTGGTAATATGTACGGATTGTAACTTGTATTGTTGTGGAATAGCCTTTGGATAAAAAAGGAAGGTGGACGTGGTGACACGCTATCCAATTGAAATTCCACAAAAAGAATATACTCACAATTGTCACTTCACGAGGATCACCAGATTTGACTCCTTTTAACCTTTGATAATGTTGAAAATGGGCATATAAATTATGACTAATGTGATATCATAGTAAGAAATCCTAAAGCCAGACGTATGAGATTTCTGTGTTATCAGACAGTGTTATAAGGAAAATTTTGTCGGTATGTGTATTTGGGATTTTGCATCACTGGACATGATTTCTCTAAATCATAGGCTTCCAAACTCACCCTAGTGTTCGGTCTAAAATATTCAGGCTTCTGCTGGGTTGCTGCCTAGAATTGTATCAGAAGACCCATAGTTCAATTAGTAAAGAGTTGACAAATTGTCAAAGCACCAGTTCTGCTAGCCTGTTATTTAACCTTGTTTTTAGAATACCATGTATCCCTATTCAACCTTGTTTCCTCGTCTGAAATTTTTAGCCCTTATATTAATTCTCTGCGTTGCCCTCTTGTAAATAGCATTCAGACAGAGAAGGAGAACAACCGAACTCTCCCAGTCAAAATTCCAGATCTAGCATGTCAAAATCTTTTCCTCAGGTGTTTCACAAGAAACTTCCTATGGGAGACGCCGTGTATTATTATTTCAAGGACATCTATGATGCTCTTCGGATAGCACAAGTTGGTGTACGTTTGATATTTCTTGATCATGATTATTCAGAATTTAGGCCGGTTGTTCCAGATGAGGAGTGCTTCTATAGGAGTTTCATATTTTCCTATCTGGAGCAAGTTGTTGATAGGATAGACACACTTTGGGAAGACCGCCTTCTTGCTGCTCTTAGAGAATTGGATAGACGAGCTGAACGTTTTCAGCGGGCCTCTGAATTTTCCCGGAGACGAGATGCACACCGTTGTTACACAATAGTGGCATGACATCGCAGTGTTAATTCTAACAAATTTGTGTAGTTAATTACCTGATTGAACAAATATTCAACCTTGCAAAAAAATTTTGCAGTTGCACAGTACTAGTAAAGAATACAATGGAGACAAACAAAGTTATATGTGTCTTACGTTGATGACTGAAATGCTGTACACATGCTCCTTCATGGTGTGGCCATCTGATCCTAAGTCTTCCTTCTTACTACTATCTCATCAAATATTATTTCGAATGATTATCTTCATACTTGTACTTTAACTATGGAAGCTTCTCAGGCGAGTTATGCTAGTCATGTTTGTTCATATCCAATTATTGATGATCAGCATTCTGTAAGCGCCATTGTAAGATGCTGGTAACTCTTTGGTTGATAGATGCCAGCTGTATGCAATGATTTATTGTATCATTGATTCTTGCAGGTATTTGTGAAGCTGATTGCGAAAATAAAGGGATGGAAGCGCATGCGGGATTACCCACCGTCAAGAGTCAGCTACAGCAGCGTGGAATTTCTCCTCGAGTTCTTCAGCAGTTATGATTCAACGAATGACATTTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATTTGCACGCACAAAGGGAGATATGGACAGCATGTAAGAGAAGGTCAAAGTCCGGAAGATTGGTGCTCGATGCTGGTTATTCCTCCCCATGCGCCGGAAGACCGGATCATACCAATAGCCTTAGCGGAAGCACTACAATGATGGAACTAGTCTAGATACGCACTACAATGTTGCCCGTGGCACACCCCGAGTGAGCTTGCTGCTCATAGAGTCTAGATATGGCATCATCTACGCACTCCCTCCTAGTGCTGCTACTCCTACTAGCCGTCCAAATCAGCCAAGGCCTGATCCTGTGGCGAGACCGGGATTCTGGTGGTTCGATTGCTGCATTGTTGTTCCCAAGGAGAGCCTCTTGCAAGGCAGCACGGCCTAGCCGGTCACCAGCTACAGAGCAGGCCAAGCAAATCCTGCACTGACTCTTCGAGAGTTCAAGGCAAGGGGCAGTCTTCAACTGATGAAGCTCTAGTTAGCACCTGGGTTGATGATGAATGTATACAGGCCATCATAATCTGTTGTCCTGTGAGGAGTAGGAACGTAAACATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTCGATCGATCTTTGACATGGCTTTGTTGCCCCCCACAGGATTTTGATGTGTAGATAAATGTGATCAGATGAATCCAAGGTATTGCGGTTTTCGTTTCTGGTCGATTTCCATGTGTGGAGTTG] consensusID : consensus_10568#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1290 fasta sequence [GCGGGCGACGCGAGTCCCACTCCCAGGAGTCCAGCTCCCGCGCCACCGCAGCCCAGGGCGGCGCCGTTGTCTCTGGGCCGGCGCGGCCGCCGCGCTCGCCTCCTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGCCCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCAAAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCACGAAGGAAGGAGGAGAGGACATCTGATTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCATTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGAACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACAAGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCCAGCAACCGGAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTTAGGCCAGTACATAGAGATGAGGAATGTTTCTATAGGAGTTTCATATTTTCCTACCTGGAGCAAGTTGTTGATAGTATAGGCACACGTGAGGAAGACCGCCTTCTTGCTGCTGTTAGAGCATTGGCTACCAAAGCTGAAAATCTTCAATGGGCCTCTGAATTTTCCCAGAAACAC-AAAGCATTTGAGAGGCTGATAGAGAAAATAAAGGGATGGAAGCGCATGCAGGAGCACCCAATATCAATAATCAGGGGGAAGATTCTTGAGTTCTTCAGCAGTTATGATACAACGGATGACATTTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATGTGCACGCGCATATGGAATTATGAATGGTGTGCAACTAATTGTGGAGAAAATCAGAATCTGGAAGATTGGTGCTCGAAGCACGTAATTGCTCCTCGTGTGTACGCAACCTCTGCTGCAGTAAAAGCTTGTGCAGAAGCTCTCAGGGTGACCGTCCAAGTGGAGAACGTTCATGATGGAACTTGCGAAAGTACGCACTACATTGTCCGCGGCGCTCCTTGCGTGACCTTGCTGCGCATAGAGTCTCACTATGACATCATCTACCCACTCCCTCCTAGTTCTATTAATAGTTCAAATCCACATGAGGAGAAGTTACTCCCAATCCCAAGTAGCATTCTTGCGTATGACAGGAGAAAGATTTTCGATAGAAAACAAAAGCATCTGGACCGCTCCAATC] [+] EMBL AK120082 [GCGGGCGACGCGAGTCCCACTCCCAGGAGTCCAGCTCCCGCGCCACCGCAGCCCAGGGCGGCGCCGTTGTCTCTGGGCCGGCGCGGCCGCCGCGCTCGCCTCCTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGCCCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCAAAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCACGAAGGAAGGAGGAGAGGACATCTGATTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCATTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGAACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACAAGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCCAGCAACCGAAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTTAGGCCAGTACATAGAGATGAGGAATGTTTCTATAGGAGTTTCATATTTTCCTACCTGGAGCAAGTTGTTGATAGTATAGGCACACGTGAGGAAGACCGCCTTCTTGCTGCTGTTAGAGCATTGGCTACCAAAGCTGAAAATCTTCAATGGGCCTCTGAATTTTCCCAGAAACAC AAAGCATTTGAGAGGCTGATAGAGAAAATAAAGGGATGGAAGCGCATGCAGGAGCACCCAATATCAATAATCAGGGGGAAGATTCTTGAGTTCTTCAGCAGTTATGATACAACGGATGACATTTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATGTGCACGCGCATATGGAATTATGAATGGTGTGCAACTAATTGTGGAGAAAATCAGAATCTGGAAGATTGGTGCTCGAAGCACGTAATTGCTCCTCGTGTGTACGCAACCTCTGCTGCAGTAAAAGCTTGTGCAGAAGCTCTCAGGGTGACCGTCCAAGTGGAGAACGTTCATGATGGAACTTGCGAAAGTACGCACTACATTGTCCGCGGCGCTCCTTGCGTGACCTTGCTGCGCATAGAGTCTCACTATGACATCATCTACCCACTCCCTCCTAGTTCTATTAATAGTTCAAATCCACATGAGGAGAAGTTACTCCCAATCCCAAGTAGCATTCTTGCGTATGACAGGAGAAAGATTTTCGATAGAAAACAAAAGCATCTGGACCGCTCCAATC] [+] EMBL AU070532 [ CTCCTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGCCCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCAAAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCACGAAGGAAGGAGGAGAGGACATCTGATTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCATTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGAACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACAAGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCCAGCAACCGGAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTTAGGCCAGTACATAGAGATGAGGAATGTTTCTATAGGAGTTTCATATTTTCCTACCTGGAGCAAGTTGTTGATAGTATAGGCACACGTGAGGAAGACCGCCTTCTTGCTGCTGTTAGAGCATTGGCTACCAAAGCTGAAAATCTTCAATGGGCCTCTGAATTTTCCCAGAAACACAAAAGCATTTGAGAa ] [+] EMBL AU097065 [ CTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGCCCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCAAAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCACGAAGGAAGGAGGAGAGGACATCTGATTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCATTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGAACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACAAGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCCAGCAACCGGAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTT ] consensusID : consensus_10568#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 199 fasta sequence [CATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTC-GATCGATCTTTGACATGGCTTTGTTGCCCCCCACAGGATTTTGATATGTAGATAAATGTGATCAGATGAATCCAAGGTATTGCGGTTTTCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF327395 [CATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTC GATCGATCTTTGACATGGCTTTGTTGCCCCCCACAGGATTTTGATATGTAGATAAATGTGATCAGATGAATCCAAGGTATTGCGGTTTTCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF327489 [CATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTCTCATCGATCTTTGACATGGCTTTGTTGCCCCCCACAGGATTTTGATATGTAAATAAATGTGATCAGATGAATCCAAGGTATTG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10568#0 GCCATTTAGCGGAATGGCGTTGTGGCGAACCCACTCTCGGCAGTAGCAGAATTTCCAATT 60 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TNTCGGCAAAANACGCAGCCATGGCCAACGCCCACGCNAGCACCAGGGCTCCCGCGCCGC 120 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CGCCTCATCCACCGATGCTTCTTCGGCCGCCGCCGCAGCCCAGGGCGGCGCCGTTGCGCC 180 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CCGCNGCCTCCNTCGTCCGCCGATAGGCANCCCCGCAGCCCGGAGACGGAGGCCGCACCG 240 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 ACGGNTCGAGCTCCGNCGCTGCGGCGCCTGATCGGANGGGAAAGAAGCCGATGTCGGCGT 300 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CTNATGATCGGAAACAGGCGCGAAGGAAGGAGAAGAGGAAATCTGGTTACCCGAAAGAGA 360 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 AGTTTCTCGAAATAGAATGCGTTCGTATCAAGGCCCCGCCAAGGAGGAGGTAAGGAGAAG 420 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TTTTACTTTTCATTCTTGACTGGCCTGGGGCTGAGCGTTCTTGTGCCATCTTCCGTGTTG 480 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 GGATCTTTGGACTTGGATCCTGTAGTTCGTGTGAAATCTTGGGATTATCTTGCATCGATG 540 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CATAGGCGCAATCTTGTTGCTTAGGCACGGTTCTTGTGTCAGTTTGTATGTTGGAATGGT 600 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 GGAGCTAGGAGCTTGGCATTCTTGATTTCTATTTAACCATGGTTGATTTTACTGTGCTTC 660 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 AGCGAAGAAATCTTGGATGGAATTTTATGGTATCCTAGAACAGAGTTGAAATCAACTAGG 720 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CCTTATGACAGATAAAAAAAAAAAAAACCAGGCACATGTTAGGGTGCCAATTCAGCTTTC 780 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TGTATGTATAGCGAGTAAACTGGTTCTTTCTTGATATCTTCTTATGGCACTTGGATAAAA 840 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 GAACGGCCTCCTTTCCTGTCGAAATTGTTGAGACTTAGTTGCTCCTGCTTGCGTTAATGG 900 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 ATTTGCTTTTTAATGCGATGCATTTTTATCGCACTGTAACAATGGGTGTGTGTGTGTGTG 960 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TAACAATGTGGTGTTAGTAGGTGATGTCATGCCTGCCGTGATATTTTGGTAAGAAATCCT 1020 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CAAGCCAAATTTATGAGCTTTCATTGTCATTGAATGGTTCATCCATATGTGCATTTGGGA 1080 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 ATTGGGATTGCATCACTAGGATCGTTTTTCTAAATTATTGACCCCTTACTTGGAAAATCA 1140 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CTTGGCACACTCTACTGTTCGGTCTAAAATATTCAACATTTGGTTGGTTACTAGCCAAAA 1200 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TTGGCTTGATAGCTCGACGCATAATTGGCAAGAGTAGACAAACTGCAGACACCAGTTTTG 1260 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TGATTTTGCTAATCAGTTCTTAAAAATCTTCATTCATCCCCTATTTCTTTGTTTCCTACT 1320 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 GTGAAATGTTTGATATTGATATTACTTCCCTGTAATTGGGTTTAAGTCTGGTAATATGTA 1380 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CGGATTGTAACTTGTATTGTTGTGGAATAGCCTTTGGATAAAAAAGGAAGGTGGACGTGG 1440 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TGACACGCTATCCAATTGAAATTCCACAAAAAGAATATACTCACAATTGTCACTTCACGA 1500 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 GGATCACCAGATTTGACTCCTTTTAACCTTTGATAATGTTGAAAATGGGCATATAAATTA 1560 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TGACTAATGTGATATCATAGTAAGAAATCCTAAAGCCAGACGTATGAGATTTCTGTGTTA 1620 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------GCGGGCGACGCGAGTCCCACTCCCAGGAGT 30 consensus_10568#0 TCAGACAGTGTTATAAGGAAAATTTTGTCGGTATGTGTATTTGGGATTTTGCATCACTGG 1680 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 CCAGCTCCCGCGCCACCGCAGCCCAGGGCGGCGCCGTTGTCTCTGGGCCGGCGCGGCCGC 90 consensus_10568#0 -ACATGATTTCTCTAAATCATAGGCTTCCAAACTCACCCTAGTGTTCGGTCTAAAATATT 1739 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 CGCGCTCGCCTCCTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGC 150 consensus_10568#0 CAGGCTTCTGCTGGGTTGCTGCCTAGAATTGTATCA--GAAGACCCATAGTTCAATTAGT 1797 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 CCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCA 210 consensus_10568#0 AAAGAGTT-GACAAATTGTCAAAGCACCAGTTCTGCTAGCCTGTTATTTAACCTTGTTTT 1856 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 AAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCAC 270 consensus_10568#0 TAGAATACCATGTATCCCTATTCAACCTTGTTTCCTCGTCTGAAATTTTTAGCCCTTATA 1916 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 GAAGGAAGGAGGAGAGGACATCTGA---TTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCA 327 consensus_10568#0 TTAATTCTCTGCGTTGCC-CTCTTGTAAATAGCATTCAGACAGAGAAGGAGAACAACCGA 1975 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 TTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGA 387 consensus_10568#0 ACTCTCCCAGTCAAAATTCCAGATCTAGCATGTCAAAATCTTTTCCTCAGGTGTTTCACA 2035 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACA 447 consensus_10568#0 AGAAACTTCCTATGGGAGACGCCGTGTATTATTATTTCAAGGACATCTATGATGCTCTTC 2095 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 AGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCC 507 consensus_10568#0 GGATAGCACAAGTTGGTGTACGTTTGATATTTCTTGATCATGATTATTCAGAATTTAGGC 2155 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 AGCAACCGGAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTTAGGC 567 consensus_10568#0 CGGTTGTTCCAGATGAGGAGTGCTTCTATAGGAGTTTCATATTTTCCTATCTGGAGCAAG 2215 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 CAGTACATAGAGATGAGGAATGTTTCTATAGGAGTTTCATATTTTCCTACCTGGAGCAAG 627 consensus_10568#0 TTGTTGATAGGATAGACACACTTTGGGAAGACCGCCTTCTTGCTGCTCTTAGAGAATTGG 2275 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 TTGTTGATAGTATAGGCACACGTGAGGAAGACCGCCTTCTTGCTGCTGTTAGAGCATTGG 687 consensus_10568#0 ATAGACGAGCTGAACGTTTTCAGCGGGCCTCTGAATTTTCCCGGAGACGAGATGCACACC 2335 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 CTACCAAAGCTGAAAATCTTCAATGGGCCTCTGAATTTTCCCAGAAACACAAAGCATTTG 747 consensus_10568#0 GTTGTTACACAATAGTGGCATGACATCGCAGTGTTAATTCTAACAAATTTGTGTAGTTAA 2395 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 AGAGGCTGATAGAGAAAATAAAGGGATGGAAGCGCATGCAGGAGCACCCAATATCAATAA 807 consensus_10568#0 TTACCTGATTGAACAAATATTCAACCTTGCAAAAAAATTTTGCAGTTGCACAGTACTAGT 2455 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 TCA----GGGGGAAGATTCTTGAGTTCTTCAGCAG----TTATGATACAACGGATGACAT 859 consensus_10568#0 AAAGAATACAATGGAGACAAACAAAGTTATATGTGTCTTACGTTGATGACTGAAATGCTG 2515 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 TTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATGTGCACGCGCATATGGAATTATGA 919 consensus_10568#0 TACACATGCTCCTTCATGGTGTGGCCATCTGATCCTAAGTCTTCCTTCTTACTACTATCT 2575 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ATGGTGTGCAACTAATTGTGGAGAAAATCAGAATCTGGAAGATTGGTGCTCGAAGCACGT 979 consensus_10568#0 CATCAAATATTATTTCGAATGATTATCTTCATACTTGTACTTTAACTATGGAAGCTTCTC 2635 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 AATTGCTCCTCGTGTGTACGCAACCTCTGCTGCAGTAAAAGCTTG-TGCAGAAGCT-CTC 1037 consensus_10568#0 AGGCGAGTTATGCTAGTCATGTTTGTTCAT-ATCCAATTATTGATGATCAGCATTCTGTA 2694 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 AGGGTGACCGTCCAAGTGGAGAACGTTCATGATGGAACTTGCGAAAGTACGCACTACATT 1097 consensus_10568#0 AGCGCCATTGTAAGATGCTGGTAACTCTTTGGTTGATAGATGCCAGCTGTATGCAATGAT 2754 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 GTCCGCGGCGCTCCTTGC--GTGACCTTGCTGCGCATAGAGTCTCAC--TATGACATCAT 1153 consensus_10568#0 TTATTGTATCATTGATTCTTGCAGGTATTTGTGAAGCTGATTGCGAAAATAAAGGGATGG 2814 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 CTACCCACTCCCTCCTAGTTCTATTAATAGTTCAAATCCACATGAGGAGAAGTTACTCCC 1213 consensus_10568#0 AAGCGCATGCGGGATTACCCACCGTCA----AGAGTCAGCTACAGCAGCGTGGAATTTCT 2870 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 AATCCCAAGTAGCATTCTTGCGTATGACAGGAGAAAGATTTTCGATAGAAAACAAAAGCA 1273 consensus_10568#0 CCTCGAGTTCTTCAGCAGTTATGATTCAACGAATGACATTTTTGCTTTCCTCAGATTAGT 2930 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 TCTGGACCGCTCCAATC------------------------------------------- 1290 consensus_10568#0 AGCAGCTACCTGGATTTGCACGCACAAAGGGAGATATGGACAGCATGTAAGAGAAGGTCA 2990 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 AAGTCCGGAAGATTGGTGCTCGATGCTGGTTATTCCTCCCCATGCGCCGGAAGACCGGAT 3050 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CATACCAATAGCCTTAGCGGAAGCACTACAATGATGGAACTAGTCTAGATACGCACTACA 3110 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 ATGTTGCCCGTGGCACACCCCGAGTGAGCTTGCTGCTCATAGAGTCTAGATATGGCATCA 3170 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TCTACGCACTCCCTCCTAGTGCTGCTACTCCTACTAGCCGTCCAAATCAGCCAAGGCCTG 3230 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 ATCCTGTGGCGAGACCGGGATTCTGGTGGTTCGATTGCTGCATTGTTGTTCCCAAGGAGA 3290 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 GCCTCTTGCAAGGCAGCACGGCCTAGCCGGTCACCAGCTACAGAGCAGGCCAAGCAAATC 3350 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CTGCACTGACTCTTCGAGAGTTCAAGGCAAGGGGCAGTCTTCAACTGATGAAGCTCTAGT 3410 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TAGCACCTGGGTTGATGATGAATGTATACAGGCCATCATAATCTGTTGTCCTGTGAGGAG 3470 consensus_10568#2 ------------------------------------------------------------ consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 TAGGAACGTAAACATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTCGATCGATCTTT 3530 consensus_10568#2 ------------CATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTCGATCGATCTTT 48 consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 GACATGGCTTTGTTGCCCCCCACAGGATTTTGATGTGTAGATAAATGTGATCAGATGAAT 3590 consensus_10568#2 GACATGGCTTTGTTGCCCCCCACAGGATTTTGATATGTAGATAAATGTGATCAGATGAAT 108 consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 CCAAGGTATTGCGGTTTTCGTTTCTGGTCGATTTCCATGTGTGGAGTTG----------- 3639 consensus_10568#2 CCAAGGTATTGCGGTTTTCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 168 consensus_10568#1 ------------------------------------------------------------ consensus_10568#0 ------------------------------- consensus_10568#2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 199 consensus_10568#1 ------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||