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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10582#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2635 fasta sequence
[GCCCGCCAGCGCCCGCGAGCCGCGAGTCCACGACCCAACCGAAATTCTGCGCGCTTGCCATCGTCTTCCTCCCTCTTCCTCGCGTCGCAAACCCTAGCTCGCGCGCTCCCCCGCCCGCTGCCTCCGCCTCTCCCTACCTACCGCCCCCCGCCCGCCCGGCCATGTCGAAGCGGCCCAAGCTCGGGGGATTCAGCATCCCTCGCCCCACTTCCTACAGCTTCGAGCGCTCCCAGACTCCCCAGCGCCTCTACGTCCCCGCCGACGACCCCGACCTCGACGACATCGCCTTCTCCGACGACGCGGCGGCCCCGTCGGACGCGCCCCCCGCGGGGGGAGGCGGGGCGGCGGGGGATGAGGAGGAGATCGACCCGCTCGACGCCTTCATGGCCGAGATCCAGGAGGAGATTCGCGCGCCGCCGCCGGCGCCCAAGCCCGAGGCGCTCCGGCGCGCGGACTCCGACGACGAGGACGACCCCGTGGAGAGCTTCCTCCGGGCCAAGAAGGATTCCGGGCTCGCGCTCGCCGCCGACGCCATGCACGCCGGGTACGACTCCGACGAGGAGGTCTACGCTGCGGCCAAGGCCGTGGACGCCGGCATGATGGAGTACGACTCCGACGACAACCCCATAGTGGTGGACAAGAAGAAGATCGAGCCTATTCCGCCGCTCGACCATTCCACCATCGAGTATGAACCCTTCAACAAGGATTTCTACGAGGAGAAGCCCTCGGTTTCAGGGATGAGTGAGCAAGAGGTGGCTGATTATATGAAAAGTTTGGCAATTCGAGTTTCAGGTTTTGATGTGCCAAGACCAATCAAAAGCTTTGCAGATTGTGGGTTTCCTGTACAACTAATGAATGCCATTGCCAAGCAGGGTTATGAAAAACCAACTACAATCCAGTGCCAGGCTTTACCAATTGTACTTTCAGGCAGAGATATCATTGGTATTGCTAAAACTGGTTCTGGCAAAACTGCAGCTTTTGTACTCCCCATGATTGTTCACATTATGGATCAGCCTGAGCTTGAGAAAGAAGAAGGGCCAATAGGTGTGGTATGTGCTCCAACAAGAGAATTGGCACATCAGATATACCTTGAAGCTAAGAAGTTTGCCAAACCTTACAATCTTCGAGTTGCTGCTGTATATGGTGGGGTTTCCAAATTTGATCAATTCAAAGAACTGAAGGCAGGCTGTGAAATAGTCATTGCTACCCCAGGGAGATTAATAGACTTGCTTAAGATGAAGGCATTGAAGATGTTTAGGGCAACTTATTTGGTTCTTGATGAAGCTGATCGCATGTTCGATCTTGGATTTGAGCCTCAGATAAGATCCATCGTTGGTCAAATTAGACCAGACCGACAAACCTTGCTTTTCTCAGCAACAATGCCATACAAAGTGGAACGTTTGGCTAGAGAAATTTTGACTGACCCTATTAGAGTTACAGTAGGTCAGGTTGGCAGTGCTAATGAAGACATTAAGCAAGTTGTAAATGTACTCCCTTCTGATGCTGAGAAGATGCCTTGGCTTCTGGAAAAACTTCCTGGGATGATTGATGATGGAGACGTTCTTGTATTTGCAGCTAAGAAGGCCAGAGTTGATGAGATTGAGAGCCAGTTAAATCAGAGAGGTTTCAGAATTGCAGCACTTCATGGTGACAAGGATCAAGCTTCTCGCATGGAGACATTGCAGAAGTTCAAATCCGGGGTTTATCACGTCCTAGTAGCAACTGATGTTGCTGCACGTGGTCTGGACATTAAGTCGATTAAAACAGTTGTTAATTTCGATATTGCAAAAGAAATGGATATGCATATTCACCGGATAGGAAGAACTGGCCGTGCTGGTGATAAAGATGGAACTGCATATACTCTGATTACACAGAAGGAGGTGCGCTTTGCAGGTGAATTGGTTCATTGTTTGATTGCTGCAGGACAGGATGTGCCAAATGAACTAATGGATCTGGCAATGAAGGATGGAAGATTCAGAGCAAACCGGGATTCAAGAAAAGGTGGGAAGAAAAGTGGCAAAGGAAAAGGTGGAGGAGGCGGGGGTGGCGGCGGTAGCGGTGCCCGTGGTCGTGGGCGTGGTGTACGTGGGGTTGACTTTGGCCTTGGCATAGGGTACAATGCTGAATCAGGATCGGTGCCTGCTCCAAGATCTGCTGCATTAAATTCATTGAAGACAGGGATGATGCAAAATTTTAAGAGCAGCTTTGTCTCTGCCTCTTCATCAAATACACCAAGCAACAGCGCACCTTCAAGAGGTGCTCCTTCCTCCTTTGTGAGACCGGCACTCCGTGGTTTTGTTTCTGGTGGCACCATAGGAGGAGACGCAAACCAAGCACGGGCAGTACTGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAAACACTGTTGAAAATGCGAACCCAAACCCTGAAAGCTCGAGGGATCGCACGAGGGAGAGAAAGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTCCATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGATGTGAATGATACAATTT-CCTGGTGAGCTTGCACGCTTGTTGTATATCTATGCGACCATGCCCCATTTG]
[+] EMBL CB629790 [GCCCGCCAGCGCCCGCGAGCCGCGAGTCCACGACCCAACCGAAATTCTGCGCGCTTGCCATCGTCTTCCTCCCTCTTCCTCGCGTCGCAAACCCTAGCTCGCGCGCTCCCCCGCCCGCTGCCTCCGCCTCTCCCTACCTACCGCCCCCCGCCCGCCCGGCCATGTCGAAGCGGCCCAAGCTCGGGGGATTCAGCATCCCTCGCCCCACTTCCTACAGCTTCGAGCGCTCCCAGACTCCCCAGCGCCTCTACGTCCCCGCCGACGACCCCGACCTCGACGACATCGCCTTCTCCGACGACGCGGCGGCCCCGTCGGACGCGCCCCCCGCGGGGGGAGGCGGGGCGGCGGGGGATGAGGAGGAGATCGACCCGCTCGACGCCTTCATGGCCGAGATCCAGGAGGAGATTCGCGCGCCGCCGCCGGCGCCCAAGCCCGAGGCGCTCCGGCGCGCGGACTCCGACGACGAGGACGACCCCGTGGAGAGCTTCCTCCGGGCCAAGAAGGATTCCGGGCTCGCGCTCGCCGCCGACGCCATGCACGCCGGGTACGACTCCGACGAGGAGGTCTACGCTGCGGCCAAGGCCGTGGACGCCGGCATGATGGAGTACGACTCCGACGACAACCCCATAGTGGTGGACAAGAAGAAGATCGAGCCTATTCCGCCGCTCGACCATTCCACCATCGAGTATGAACCCTTCAACAAGGATTTCTACGAGGAGAAGCCCTCGGTTTCAGGGATGAGTGAGCAAGAGGTGGCTGATTATA ]
[+] EMBL AK103891 [ CCTCCCTCTTCCTCGCGTCGCAAACCCTAGCTCGCGCGCTCCCCCGCCCGCTGCCTCCGCCTCTCCCTACCTACCGCCCCCCGCCCGCCCGGCCATGTCGAAGCGGCCCAAGCTCGGGGGATTCAGCATCCCTCGCCCCACTTCCTACAGCTTCGAGCGCTCCCAGCCTCCCCAGCGCCTCTACGTCCCCGCCGACGACCCCGACCTCGACGACATCGCCTTCTCCGACGACGCGGCGGCCCCGTCGGACGCGCCCCCCGCGGGGGGAGGCGGGGCGGCGGGGGATGAGGAGGAGATCGACCCGCTCGACGCCTTCATGGCCGAGATCCAGGAGGAGATTCGCGCGCCGCCGCCGGCGCCCAAGCCCGAGGCGCTCCGGCGCGCGGACTCCGACGACGAGGACGACCCCGTGGAGAGCTTCCTCCGGGCCAAGAAGGATTCCGGGCTCGCGCTCGCCGCCGACGCCATGCACGCCGGGTACGACTCCGACGAGGAGGTCTACGCTGCGGCCAAGGCCGTGGACGCCGGCATGATGGAGTACGACTCCGACGACAACCCCATAGTGGTGGACAAGAAGAAGATCGAGCCTATTCCGCCGCTCGACCATTCCACCATCGAGTATGAACCCTTCAACAAGGATTTCTACGAGGAGAAGCCCTCGGTTTCAGGGATGAGTGAGCAAGAGGTGGCTGATTATATGAAAAGTTTGGCAATTCGAGTTTCAGGTTTTGATGTGCCAAGACCAATCAAAAGCTTTGCAGATTGTGGGTTTCCTGTACAACTAATGAATGCCATTGCCAAGCAGGGTTATGAAAAACCAACTACAATCCAGTGCCAGGCTTTACCAATTGTACTTTCAGGCAGAGATATCATTGGTATTGCTAAAACTGGTTCTGGCAAAACTGCAGCTTTTGTACTCCCCATGATTGTTCACATTATGGATCAGCCTGAGCTTGAGAAAGAAGAAGGGCCAATAGGTGTGGTATGTGCTCCAACAAGAGAATTGGCACATCAGATATACCTTGAAGCTAAGAAGTTTGCCAAACCTTACAATCTTCGAGTTGCTGCTGTATATGGTGGGGTTTCCAAATTTGATCAATTCAAAGAACTGAAGGCAGGCTGTGAAATAGTCATTGCTACCCCAGGGAGATTAATAGACTTGCTTAAGATGAAGGCATTGAAGATGTTTAGGGCAACTTATTTGGTTCTTGATGAAGCTGATCGCATGTTCGATCTTGGATTTGAGCCTCAGATAAGATCCATCGTTGGTCAAATTAGACCAGACCGACAAACCTTGCTTTTCTCAGCAACAATGCCATACAAAGTGGAACGTTTGGCTAGAGAAATTTTGACTGACCCTATTAGAGTTACAGTAGGTCAGGTTGGCAGTGCTAATGAAGACATTAAGCAAGTTGTAAATGTACTCCCTTCTGATGCTGAGAAGATGCCTTGGCTTCTGGAAAAACTTCCTGGGATGATTGATGATGGAGACGTTCTTGTATTTGCAGCTAAGAAGGCCAGAGTTGATGAGATTGAGAGCCAGTTAAATCAGAGAGGTTTCAGAATTGCAGCACTTCATGGTGACAAGGATCAAGCTTCTCGCATGGAGACATTGCAGAAGTTCAAATCCGGGGTTTATCACGTCCTAGTAGCAACTGATGTTGCTGCACGTGGTCTGGACATTAAGTCGATTAAAACAGTTGTTAATTTCGATATTGCAAAAGAAATGGATATGCATATTCACCGGATAGGAAGAACTGGCCGTGCTGGTGATAAAGATGGAACTGCATATACTCTGATTACACAGAAGGAGGTGCGCTTTGCAGGTGAATTGGTTCATTGTTTGATTGCTGCAGGACAGGATGTGCCAAATGAACTAATGGATCTGGCAATGAAGGATGGAAGATTCAGAGCAAACCGGGATTCAAGAAAAGGTGGGAAGAAAAGTGGCAAAGGAAAAGGTGGAGGAGGCGGGGGTGGCGGCGGTAGCGGTGCCCGTGGTCGTGGGCGTGGTGTACGTGGGGTTGACTTTGGCCTTGGCATAGGGTACAATGCTGAATCAGGATCGGTGCCTGCTCCAAGATCTGCTGCATTAAATTCATTGAAGACAGGGATGATGCAAAATTTTAAGAGCAGCTTTGTCTCTGCCTCTTCATCAAATACACCAAGCAACAGCGCACCTTCAAGAGGTGCTCCTTCCTCCTTTGTGAGACCGGCACTCCGTGGTTTTGTTTCTGGTGGCACCATAGGAGGAGACGCAAACCAAGCACGGGCAGTACTGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAAACACTGTTGAAAATGCGAACCCAAACCCTGAAAGCTCGAGGGATCGCACGAGGGAGAGAAAGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTCCATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGATGTGAATGATACAATTT CCTGGTGAGCTTGCACGCTTGTTGTATATCTATGCGACCATGCCCCATTTG]
[+] EMBL CB639252 [ CTTCCTCCGGGCCAAGAAGGATTCCGGGCTCGCGCTCGCCGCCGACGCCATGCACGCCGGGTACGACTCCGACGAGGAGGTCTACGCTGCGGCCAAGGCCGTGGACGCCGGCATGATGGAGTACGACTCCGACGACAACCCCATAGTGGTGGACAAGAAGAAGATCGAGCCTATTCCGCCGCTCGACCATTCCACCATCGAGTATGAACCCTTCAACAAGGATTTCTACGAGGAGAAGCCCTCGGTTTCAGGGATGAGTGAGCAAGAGGTGGCTGATTATATGAAAAGTTTGGCAATTCGAGTTTCAGGTTTTGATGTGCCAAGACCAATCAAAAGCTTTGCAGATTGTGGGTTTCCTGTACAACTAATGAATGCCATTGCCAAGCAGGGTTATGAAAAACCAACTACAATCCAGTGCCAGGCTTTACCAATTGTACTATTAGGCAGAGATATCATTGGTATTGCTAAAACTGGTTCTG ]
[-] EMBL CB639253 [ TCTGGTGGCACCATAGGAGGAGACGCAAACCAAGCACGGGCAGTACTGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAAACACTGTTGAAAATGCGAACCCAAACCCTGAAAGCTTGAGGGATCGCACGAGGGAGAGAAAGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTCCATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGATGTGAATGATACAATTTACCTGGTGAGCTTGCACGCTTG ]
consensusID : consensus_10582#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 891 fasta sequence
[ATGTTGCTGCACGTGGTCTGGACATTAAGTCGATTAAAACAGTTGTTAATTTTGATATTGCAAAAGAAATGGATATGCATATTCACCGGATAGGAAGAACTGGCCGTGCTGGTGATAAAGATGGAACTGCATATACTCTGATTACACAGAAGGAGGTGCGCTTTGCAGGTGAATTGGTTCATTGTTTGATTGCTGCAGGACAGGATGTGCCAAATGAACTAATGGATCTGGCAATGAAGGATGGAAGATTCAGAGCAAACCGGGATTCAAGAAAAGGTGGGAAGAAAAGTGGCAAAGGAAAAGGTGGAGGAGGAGGCGGGGGTGGCGGGGGTGGCGGCGGTAGCGGCGCCTGTGGTCGTGGGCGTGGTGTACGTGGGGTTGACTTTGGCCTTGGCATAGGGTACAATGCTGAATCAGGATCGGTACCTGCTCCAAGATCTGCTGCAGTAAATTCATTGAAGACAGGGATGATGCAAAATTTTAAGAGCAGCTTTGTCTCTGCCTCTTCATCAAATACACCAAGCAACAGCGCACCTTCAAGAGGTGCTCCTTCCTCCTTTGTGAGACCGGCACTCCGTGGTTTTGTTTCTGGTGGCACCATAGGAGGAGACGCAAACCAAGCACGGGCAGTACAGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAAACACTGTTGAAAATGCGAAACCAAACCCTGAAAGCTCGAGGGATCGCACGAGGGAGAGAAAGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTCCATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGATGTGAATGATACAATTTCCTGGTGAGCTTGCACGCTT]
[-] EMBL CB629791 [ATGTTGCTGCACGTGGTCTGGACATTAAGTCGATTAAAACAGTTGTTAATTTTGATATTGCAAAAGAAATGGATATGCATATTCACCGGATAGGAAGAACTGGCCGTGCTGGTGATAAAGATGGAACTGCATATACTCTGATTACACAGAAGGAGGTGCGCTTTGCAGGTGAATTGGTTCATTGTTTGATTGCTGCAGGACAGGATGTGCCAAATGAACTAATGGATCTGGCAATGAAGGATGGAAGATTCAGAGCAAACCGGGATTCAAGAAAAGGTGGGAAGAAAAGTGGCAAAGGAAAAGGTGGAGGAGGAGGCGGGGGTGGCGGGGGTGGCGGCGGTAGCGGCGCCTGTGGTCGTGGGCGTGGTGTACGTGGGGTTGACTTTGGCCTTGGCATAGGGTACAATGCTGAATCAGGATCGGTACCTGCTCCAAGATCTGCTGCAGTAAATTCATTGAAGACAGGGATGATGCAAAATTTTAAGAGCAGCTTTGTCTCTGCCTCTTCATCAAATACACCAAGCAACAGCGCACCTTCAAGAGGTGCTCCTTCCTCCTTTGTGAGACCGGCACTCCGTGGTTTTGTTTCTGGTGGCACCATAGGAGGAGACGCAAACCAAGCACGGGCAGTACAGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAAACACTGTTGAAAATGCGAAACCAAACCCTGAAAGCTCGAGGGATCGCACGAGGGAGAGAAAGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTCCATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGATGTGAATGATACAATTTCCTGGTGAGCTTGCACGCTT]
consensusID : consensus_10582#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 864 fasta sequence
[GAATTGCAGCACTTCATGGTGACAAGGATCAAGCTTCTCGCATGGAGACATGCAGAAAGTTCAAATCCGGGGTTTATCACGTCCTAGTAGCAACTGATGTTGCTGCACGTGGTCTGGACATTAAGTCGATTAAAACAGTTGTTAATTTCGATATTGCAAAAGAAATGGATATGCATATTCACCGGATAGGAAGAACTGGCCGTGCTGGTGATAAAGATGGAACTGCATATACTCTGATTACACAGAAGGAGGTGCGCTTTGCAGGTGAATTGGTTCATTGTTTGATTGCTGCAGGACAGGATGTGCCAAATGAACTAATGGATCTGGCAATGAAGGATGGAAGATTCAGAGCAAACCGGGATTCAAGAAAAGGTGGGAAGAAAAGTGGCCTTGGCATAGGGTACAATGCTGAATCAGGATCGGTGCCTGCTCCAAGATCTGCTGCATTAAATTCATTGAAGACAGGGATGATGCAAAATTTTAAGAGCAGCTTTGTCTCTGCCTCTTCATCAAATACACCAAGCAACAGCGCACCTTCAAGAGGTGCTCCTTCCTCCTTTGTGAGACCGGCACTCCGTGGTTTTGTTTCTGGTGGCACCATAGGAGGAGACGCAAACCAAGCACGGGCAGTACTGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAAACACTGTTGAAAATGCGAACCCAAACCCTGAAAGCTCGAGGGATCGCACGAGGGAGAGAAAGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTCCATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGATGTGAATGAT]
[-] EMBL CB662610 [GAATTGCAGCACTTCATGGTGACAAGGATCAAGCTTCTCGCATGGAGACATGCAGAAAGTTCAAATCCGGGGTTTATCACGTCCTAGTAGCAACTGATGTTGCTGCACGTGGTCTGGACATTAAGTCGATTAAAACAGTTGTTAATTTCGATATTGCAAAAGAAATGGATATGCATATTCACCGGATAGGAAGAACTGGCCGTGCTGGTGATAAAGATGGAACTGCATATACTCTGATTACACAGAAGGAGGTGCGCTTTGCAGGTGAATTGGTTCATTGTTTGATTGCTGCAGGACAGGATGTGCCAAATGAACTAATGGATCTGGCAATGAAGGATGGAAGATTCAGAGCAAACCGGGATTCAAGAAAAGGTGGGAAGAAAAGTGGCCTTGGCATAGGGTACAATGCTGAATCAGGATCGGTGCCTGCTCCAAGATCTGCTGCATTAAATTCATTGAAGACAGGGATGATGCAAAATTTTAAGAGCAGCTTTGTCTCTGCCTCTTCATCAAATACACCAAGCAACAGCGCACCTTCAAGAGGTGCTCCTTCCTCCTTTGTGAGACCGGCACTCCGTGGTTTTGTTTCTGGTGGCACCATAGGAGGAGACGCAAACCAAGCACGGGCAGTACTGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAAACACTGTTGAAAATGCGAACCCAAACCCTGAAAGCTCGAGGGATCGCACGAGGGAGAGAAAGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTCCATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGATGT ]
[-] EMBL CB662609 [ gAAGTTCAAATCCGGGGTTTATCACGTCCTAGTAGCAACTGATGTTGCTGCACGTGGTCTGGACATTAAGTCGATTAAAACAGTTGTTAATTTCGATATTGCAAAAGAAATGGATATGCATATTCACCGGATAGGAAGAACTGGCCGTGCTGGTGATAAAGATGGAACTGCATATACTCTGATTACACAGAAGGAGGTGCGCTTTGCAGGTGAATTGGTTCATTGTTTGATTGCTGCAGGACAGGATGTGCCAAATGAACTAATGGATCTGGCAATGAAGGATGGAAGATTCAGAGCAAACCGGGATTCAAGAAAAGGTGGGAAGAAAAGTGGCCTTGGCATAGGGTACAATGCTGAATCAGGATCGGTGCCTGCTCCAAGATCTGCTGCATTAAATTCATTGAAGACAGGGATGATGCAAAATTTTAAGAGCAGCTTTGTCTCTGCCTCTTCATCAAATACACCAAGCAACAGCGCACCTTCAAGAGGTGCTCCTTCCTCCTTTGTGAGACCGGCACTCCGTGGTTTTGTTTCTGGTGGCACCATAGGAGGAGACGCAAACCAAGCACGGGCAGTACTGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAAACACTGTTGAAAATGCGAACCCAAACCCTGAAAGCTCGAGGGATCGCACGAGGGAGAGAAAGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTCCATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGATGTGAATGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10582#0 GCCCGCCAGCGCCCGCGAGCCGCGAGTCCACGACCCAACCGAAATTCTGCGCGCTTGCCA 60
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TCGTCTTCCTCCCTCTTCCTCGCGTCGCAAACCCTAGCTCGCGCGCTCCCCCGCCCGCTG 120
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 CCTCCGCCTCTCCCTACCTACCGCCCCCCGCCCGCCCGGCCATGTCGAAGCGGCCCAAGC 180
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TCGGGGGATTCAGCATCCCTCGCCCCACTTCCTACAGCTTCGAGCGCTCCCAGACTCCCC 240
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 AGCGCCTCTACGTCCCCGCCGACGACCCCGACCTCGACGACATCGCCTTCTCCGACGACG 300
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 CGGCGGCCCCGTCGGACGCGCCCCCCGCGGGGGGAGGCGGGGCGGCGGGGGATGAGGAGG 360
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 AGATCGACCCGCTCGACGCCTTCATGGCCGAGATCCAGGAGGAGATTCGCGCGCCGCCGC 420
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 CGGCGCCCAAGCCCGAGGCGCTCCGGCGCGCGGACTCCGACGACGAGGACGACCCCGTGG 480
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 AGAGCTTCCTCCGGGCCAAGAAGGATTCCGGGCTCGCGCTCGCCGCCGACGCCATGCACG 540
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 CCGGGTACGACTCCGACGAGGAGGTCTACGCTGCGGCCAAGGCCGTGGACGCCGGCATGA 600
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TGGAGTACGACTCCGACGACAACCCCATAGTGGTGGACAAGAAGAAGATCGAGCCTATTC 660
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 CGCCGCTCGACCATTCCACCATCGAGTATGAACCCTTCAACAAGGATTTCTACGAGGAGA 720
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 AGCCCTCGGTTTCAGGGATGAGTGAGCAAGAGGTGGCTGATTATATGAAAAGTTTGGCAA 780
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TTCGAGTTTCAGGTTTTGATGTGCCAAGACCAATCAAAAGCTTTGCAGATTGTGGGTTTC 840
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 CTGTACAACTAATGAATGCCATTGCCAAGCAGGGTTATGAAAAACCAACTACAATCCAGT 900
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 GCCAGGCTTTACCAATTGTACTTTCAGGCAGAGATATCATTGGTATTGCTAAAACTGGTT 960
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 CTGGCAAAACTGCAGCTTTTGTACTCCCCATGATTGTTCACATTATGGATCAGCCTGAGC 1020
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TTGAGAAAGAAGAAGGGCCAATAGGTGTGGTATGTGCTCCAACAAGAGAATTGGCACATC 1080
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 AGATATACCTTGAAGCTAAGAAGTTTGCCAAACCTTACAATCTTCGAGTTGCTGCTGTAT 1140
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 ATGGTGGGGTTTCCAAATTTGATCAATTCAAAGAACTGAAGGCAGGCTGTGAAATAGTCA 1200
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TTGCTACCCCAGGGAGATTAATAGACTTGCTTAAGATGAAGGCATTGAAGATGTTTAGGG 1260
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 CAACTTATTTGGTTCTTGATGAAGCTGATCGCATGTTCGATCTTGGATTTGAGCCTCAGA 1320
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TAAGATCCATCGTTGGTCAAATTAGACCAGACCGACAAACCTTGCTTTTCTCAGCAACAA 1380
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TGCCATACAAAGTGGAACGTTTGGCTAGAGAAATTTTGACTGACCCTATTAGAGTTACAG 1440
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TAGGTCAGGTTGGCAGTGCTAATGAAGACATTAAGCAAGTTGTAAATGTACTCCCTTCTG 1500
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 ATGCTGAGAAGATGCCTTGGCTTCTGGAAAAACTTCCTGGGATGATTGATGATGGAGACG 1560
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TTCTTGTATTTGCAGCTAAGAAGGCCAGAGTTGATGAGATTGAGAGCCAGTTAAATCAGA 1620
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 GAGGTTTCAGAATTGCAGCACTTCATGGTGACAAGGATCAAGCTTCTCGCATGGAGACAT 1680
consensus_10582#2 ---------GAATTGCAGCACTTCATGGTGACAAGGATCAAGCTTCTCGCATGGAGACAT 51
consensus_10582#1 ------------------------------------------------------------
consensus_10582#0 TGCAGAAGTTCAAATCCGGGGTTTATCACGTCCTAGTAGCAACTGATGTTGCTGCACGTG 1740
consensus_10582#2 GCAGAAAGTTCAAATCCGGGGTTTATCACGTCCTAGTAGCAACTGATGTTGCTGCACGTG 111
consensus_10582#1 ---------------------------------------------ATGTTGCTGCACGTG 15
***************
consensus_10582#0 GTCTGGACATTAAGTCGATTAAAACAGTTGTTAATTTCGATATTGCAAAAGAAATGGATA 1800
consensus_10582#2 GTCTGGACATTAAGTCGATTAAAACAGTTGTTAATTTCGATATTGCAAAAGAAATGGATA 171
consensus_10582#1 GTCTGGACATTAAGTCGATTAAAACAGTTGTTAATTTTGATATTGCAAAAGAAATGGATA 75
************************************* **********************
consensus_10582#0 TGCATATTCACCGGATAGGAAGAACTGGCCGTGCTGGTGATAAAGATGGAACTGCATATA 1860
consensus_10582#2 TGCATATTCACCGGATAGGAAGAACTGGCCGTGCTGGTGATAAAGATGGAACTGCATATA 231
consensus_10582#1 TGCATATTCACCGGATAGGAAGAACTGGCCGTGCTGGTGATAAAGATGGAACTGCATATA 135
************************************************************
consensus_10582#0 CTCTGATTACACAGAAGGAGGTGCGCTTTGCAGGTGAATTGGTTCATTGTTTGATTGCTG 1920
consensus_10582#2 CTCTGATTACACAGAAGGAGGTGCGCTTTGCAGGTGAATTGGTTCATTGTTTGATTGCTG 291
consensus_10582#1 CTCTGATTACACAGAAGGAGGTGCGCTTTGCAGGTGAATTGGTTCATTGTTTGATTGCTG 195
************************************************************
consensus_10582#0 CAGGACAGGATGTGCCAAATGAACTAATGGATCTGGCAATGAAGGATGGAAGATTCAGAG 1980
consensus_10582#2 CAGGACAGGATGTGCCAAATGAACTAATGGATCTGGCAATGAAGGATGGAAGATTCAGAG 351
consensus_10582#1 CAGGACAGGATGTGCCAAATGAACTAATGGATCTGGCAATGAAGGATGGAAGATTCAGAG 255
************************************************************
consensus_10582#0 CAAACCGGGATTCAAGAAAAGGTGGGAAGAAAAGTGGCAAAGGAAAAGGTGGAGGAGGCG 2040
consensus_10582#2 CAAACCGGGATTCAAGAAAAGGTGGGAAGAAAAGTGGC---------------------- 389
consensus_10582#1 CAAACCGGGATTCAAGAAAAGGTGGGAAGAAAAGTGGCAAAGGAAAAGGTGGAGGAGGAG 315
**************************************
consensus_10582#0 GGGGTGGCGGCGGTAGCGGTGCCCGTGGTCGTGGGCGTGGTGTACGTGGGGTTGACTTTG 2100
consensus_10582#2 ------------------------------------------------------------
consensus_10582#1 GCGGGGGTGGCGGGGGTGGCGGCGGTAGCGGCGCCTGTGGTCGTGGGCGTGGTGTACGTG 375
consensus_10582#0 GC------------CTTGGCATAGGGTACAATGCTGAATCAGGATCGGTGCCTGCTCCAA 2148
consensus_10582#2 --------------CTTGGCATAGGGTACAATGCTGAATCAGGATCGGTGCCTGCTCCAA 435
consensus_10582#1 GGGTTGACTTTGGCCTTGGCATAGGGTACAATGCTGAATCAGGATCGGTACCTGCTCCAA 435
*********************************** **********
consensus_10582#0 GATCTGCTGCATTAAATTCATTGAAGACAGGGATGATGCAAAATTTTAAGAGCAGCTTTG 2208
consensus_10582#2 GATCTGCTGCATTAAATTCATTGAAGACAGGGATGATGCAAAATTTTAAGAGCAGCTTTG 495
consensus_10582#1 GATCTGCTGCAGTAAATTCATTGAAGACAGGGATGATGCAAAATTTTAAGAGCAGCTTTG 495
*********** ************************************************
consensus_10582#0 TCTCTGCCTCTTCATCAAATACACCAAGCAACAGCGCACCTTCAAGAGGTGCTCCTTCCT 2268
consensus_10582#2 TCTCTGCCTCTTCATCAAATACACCAAGCAACAGCGCACCTTCAAGAGGTGCTCCTTCCT 555
consensus_10582#1 TCTCTGCCTCTTCATCAAATACACCAAGCAACAGCGCACCTTCAAGAGGTGCTCCTTCCT 555
************************************************************
consensus_10582#0 CCTTTGTGAGACCGGCACTCCGTGGTTTTGTTTCTGGTGGCACCATAGGAGGAGACGCAA 2328
consensus_10582#2 CCTTTGTGAGACCGGCACTCCGTGGTTTTGTTTCTGGTGGCACCATAGGAGGAGACGCAA 615
consensus_10582#1 CCTTTGTGAGACCGGCACTCCGTGGTTTTGTTTCTGGTGGCACCATAGGAGGAGACGCAA 615
************************************************************
consensus_10582#0 ACCAAGCACGGGCAGTACTGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAA 2388
consensus_10582#2 ACCAAGCACGGGCAGTACTGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAA 675
consensus_10582#1 ACCAAGCACGGGCAGTACAGCCTGCGCCCTCCTTTGTCCCTGCTTCCAGACCTGCAGAAA 675
****************** *****************************************
consensus_10582#0 ACACTGTTGAAAATGCGAACCCAAACCCTGAAAGCTCGAGGGATCGCACGAGGGAGAGAA 2448
consensus_10582#2 ACACTGTTGAAAATGCGAACCCAAACCCTGAAAGCTCGAGGGATCGCACGAGGGAGAGAA 735
consensus_10582#1 ACACTGTTGAAAATGCGAAACCAAACCCTGAAAGCTCGAGGGATCGCACGAGGGAGAGAA 735
******************* ****************************************
consensus_10582#0 AGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTC 2508
consensus_10582#2 AGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTC 795
consensus_10582#1 AGCGGCCGTCGGGGTGGGATCGCTAGGCCTTGGGGGAACCCAATGTACCAAAATTCTCTC 795
************************************************************
consensus_10582#0 CATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGAT 2568
consensus_10582#2 CATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGAT 855
consensus_10582#1 CATTTTTGTTCTTCTGCCCTGATGAAACATATATTGACTGTAACATGTAGATTACATGAT 855
************************************************************
consensus_10582#0 GTGAATGATACAATTTCCTGGTGAGCTTGCACGCTTGTTGTATATCTATGCGACCATGCC 2628
consensus_10582#2 GTGAATGAT--------------------------------------------------- 864
consensus_10582#1 GTGAATGATACAATTTCCTGGTGAGCTTGCACGCTT------------------------ 891
*********
consensus_10582#0 CCATTTG 2635
consensus_10582#2 -------
consensus_10582#1 -------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||