These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10603#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 820 fasta sequence [GAACCCACGTCTGCAGAAATTAGCACCACATACAATCCTTACATTTATT-CG-A-A-TGCAGAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTATTCTGCTCCTTGGTAGGCCCTCAGATTCTGCAGGAGTTTCCCTACTCCTATCCTGTGATCTGCAGACTCATCAGAGA] [-] EMBL CB627985 [GAACCCACGTCTGCAGAAATTAGCACCACATACAATCCTTACATTTATT CGAA A TGCAGAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATC ] [+] EMBL CB633837 [ tcctttttTTAGCACCACATACAATCCTTACATTTATT CG A ACTCCAGAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCCTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTA ] [+] EMBL CB628262 [ CACCACATACAATCCTTACATTTATT CGAA A TGCCTAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTATTCTGCTCCTTGGTAGGCCCTCAGATTCTGCAGGAGTTTCCCTA ] [+] EMBL CB630394 [ TACAATCCTTACATTTATTCCA A A TGCAGAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAAAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTAT ] [+] EMBL CB631112 [ AATCCTTACATTTATT CC ATA TGCAGAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAAAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTAT ] [+] EMBL CB634686 [ TCCTTACATTTATT CG C A TGAAAAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCCTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAATGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGAGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTATTCTGCTCCTTGGTAGGCCCTCAGATTCTGCAGGAGTTTCCCTACTCCTATCCTGTGATCTGCAGACTCATCAGAGA] [+] EMBL CB628210 [ AACTTACTTCCCCTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTATTCT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||