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Oryza sativa
cluster # 10603 cluster # 10603       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10603#0 length = 820 sequences # 7  

consensusID : consensus_10603#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 820
fasta sequence
                              [GAACCCACGTCTGCAGAAATTAGCACCACATACAATCCTTACATTTATT-CG-A-A-TGCAGAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTATTCTGCTCCTTGGTAGGCCCTCAGATTCTGCAGGAGTTTCCCTACTCCTATCCTGTGATCTGCAGACTCATCAGAGA]

[-] EMBL CB627985             [GAACCCACGTCTGCAGAAATTAGCACCACATACAATCCTTACATTTATT CGAA A TGCAGAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATC                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB633837             [           tcctttttTTAGCACCACATACAATCCTTACATTTATT CG A ACTCCAGAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCCTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTA                                                                             ]
[+] EMBL CB628262             [                       CACCACATACAATCCTTACATTTATT CGAA A TGCCTAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTATTCTGCTCCTTGGTAGGCCCTCAGATTCTGCAGGAGTTTCCCTA                                 ]
[+] EMBL CB630394             [                              TACAATCCTTACATTTATTCCA A A TGCAGAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAAAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTAT                                                                            ]
[+] EMBL CB631112             [                                 AATCCTTACATTTATT CC ATA TGCAGAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAAAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTAT                                                                            ]
[+] EMBL CB634686             [                                   TCCTTACATTTATT CG C A TGAAAAATAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACACCCTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAATGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGAGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTATTCTGCTCCTTGGTAGGCCCTCAGATTCTGCAGGAGTTTCCCTACTCCTATCCTGTGATCTGCAGACTCATCAGAGA]
[+] EMBL CB628210             [                                                                                                                                                 AACTTACTTCCCCTAGGCTGATGCCCCAAACTATTGGCTCCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGACTCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTTGCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACATACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCTGGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAACTCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTGGTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCAGAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTTCCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCAATTATCTTGAACAACTCAGTGTATTCT                                                                         ]


>consensus_10603#0 GAACCCACGTCTGCAGAAATTAGCACCACATACAATCCTTACATTTATTCGAATGCAGAA TAACATAACATACAATACCCTAAATTTGTTCCAATCACATGGATAACTCATCCGCACACA CCGTCACACACACACATCACAAACTTACTTTAATTAGGCTGATGCCCCAAACTATTGGCT CCTTAAGCAAAACTACCTGTAATCAGTCCCAGTGACTTGCTCACAATACTAGAAATGGAC TCTTCATGCTCAAAAGCACCAACACCGGAATGGAACAACAAAAAGTTTTCAATCTTTGTT GCCGTCTCTGCTGTTTCTTTAAGTATGATGTCCATTTCGTGTTTCTTAAACACCACAACA TACGCCGGGTTCTTTTCCATCATCCAATTCATTTGCTGAATTACAACCCTTCTTACCCCT GGAAAATCAGCAGTTGGAGACTTGTACACAGTTAATATCATCTTAAGCTTCAGCACGAAC TCATCAATTGTTATATTGGCACTCCTGAGTGCATCGGTGAAAACCATTTCATCCCCGTTG GTGCAAATTTGCACGGTGAGCCCAATAAAGGACTCCAGTAGTTTGCCTTTGCCCTCTGCA GAATCTATTAGCTCTTGCGCATGTGAAGAATGATCATCAGAAGAATCTGACTCAATTTTT CCCACTGCTAGGTTGATTGTCAGGTCGATCATCTCCAGTACCTTTGGCAGTGCTTTATCA ATTATCTTGAACAACTCAGTGTATTCTGCTCCTTGGTAGGCCCTCAGATTCTGCAGGAGT TTCCCTACTCCTATCCTGTGATCTGCAGACTCATCAGAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)