cluster # 10612

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Oryza sativa
cluster # 10612 cluster # 10612 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10612#0 length = 674 sequences # 7
consensusID : consensus_10612#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 674
fasta sequence
                              [AGCTACCCTAGCCTTACTAAAGGGAATAGCTTGCGGCGCGTCTACAGCCAGCCCCACCGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTTTTCGCCCGCGCCGACGCGCGGCGGCG---CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA-CGCGTCGGCGGA-GCATTGCAGGGAGCAGGAGACGACGAGCCGGA-ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCT-----AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA-GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCC---AAAAAAAAAATGCAGGA-GGACAAGA-CAGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT-CTGTTAAAACT-AATGTATCTGATTTTTAATCTGCTGTTTTTTGTTTTGTGTTTTATTTCACAGTGCCACACGCACC--C--GGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAATTCGCATTAAATTGGATTAG-TTTTTTT-TTTTTTTTACAAAATTCAGTTTGACTTAAGTTGGTCCCAAGCAAATGTGTAAATTGTGATTTGTGGGAGATTCAGTTTGACACGTCCCTAGGTTTTTTAATTCTAAG]

[+] EMBL BU673466             [AGCTACCCTAGCCTTACTAAAGGGAATAGCTTGCGGCGCGTCTACAGCCAGCCCCACCGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTCTTCGCGCGCGCCGACGCGCGGCGGCGCCCCCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGACCGCGTCGGCGGACGCATTGCCGGGAGCAGGAGACGACGCGCCGGACACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCTAGGCAAGGCAAGGCAAGCCTTGCAAGTTTGTAGCAAGACAGACGGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCCCCAAAAAAAAAAATGCAGGACGGACAAGACCAGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT CTGTTAAAACT AATGTATCTGATTTTTAATCTGCTGTTTTTGGTTTTAGGTTTTATGTCACAGTGCCACACGCACC  C  GGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAATTCGCATTAAATTGGATTAG TTTTTTTATTAATATTACAAAATTCAGTTTGACTTAAGTNGGTCCCAAGCAAATGTGTAAATTGTGATTTGTGGGAGATTCAGTTTGACACGTC                     ]
[+] EMBL BU673239             [                                              GCCAGCCCCACCGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTCTTCGCGCGCGCCGACGCGCGGCGGCGCCCCCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA CGCGTCGGCGGA GCATTGCAGGGAGCAGGAGACGACGAGCCGGA ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCTAGGCAAGGCAAGGCAAGCCTTGCAAGTTTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCCCCAAAAAAAAAAATGCAGGA GGACAAGA CAGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT CTGTTAAAACT AATGTATCTGATTTTTAATCTGCTGTTTTTTGTTTTTTGTTTTATGTCACAGTGCCACACGCACC  C  GGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAATTCGCATTAAATTGGATTAGTTTTTTTT TTTTTTTTACAAAATTCAGTTTGACTTAAGTTGGTCCCAAGCAAATGTGTAAATTGTGATTTGTGGGAGATTCAGTTTGACACGTC                     ]
[-] EMBL CB664907             [                                                     CCACCGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTTTTCGCCCGCGCCGACGCGCGGCGGCG   CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA TGCGTCGGCGGA GCATTGCAGGGAGCAGGAGACGACGAGCCGGA ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCT     AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTTTTCGTAAGTTTGCTCAATGAAATCGCCCCC   AAAAAAAAAATGCAGGA GGCCAAGC CCGAGAGTAGCTCAAGAGTCTTCAGTGTAGCTCAAGTTCCTGTTAAAGCTCAATGTATCTGATTTTTAATCTGCTGTTTTTGGTCTTGTGTTTTATTTCACAGTTCCACGAGCTCC  CGGGGTGCTGGTCCCAAATTCGGTGAGCTCAATGGCAAATTTGCATTAAATCGG    G TTCGTTT TTTTTTTTCCAAAACTCAGTTTGcgtt                                                                                ]
[+] EMBL CB633610             [                                                        CCGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTCTTCGCCCGCGCCGACGCGCGGCGGCG   CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA CGCGTCGGCGGA GCATTGCAGGGAGCAGGAGACGACGAGCCGGA ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCT     AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCC    AAAAAAAAATGCAGGA GGACAAGA CAGACAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT CTGTTAAAACT AATGTATCTGATTTTTAATCTGCTGTTTTTTGTTTTGTGTTTTATTTCACAGTGCCACACGCACCCGC  GGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAATTCGCATTAAATTGGATTAG TTT                                                                                                                ]
[-] EMBL CB633611             [                                                         CGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTTTTCGCCCGCGCCGACGCGCGGCGGCG   CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA CGCGTCGGCGGA GCATTGCAGGGAGCAGGAGACGACGAGCCGGA ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCT     AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCC    AAAAAAAAATGCAGGA GGACAAGA CAGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT CTGTTAAAACT AATGTATCTGATTTTTAATCTGCTGTTTTTTGTTTTGTGTTTTATTTCACAGTGCCACACGCACCCGC  GGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAATTCGCATTAAATTGGATTAG TTTTTTT TTTTTTTTACAAAATTCAGTTTGACTTAAGTTGGTCCCAAGCAAATGTGTAAATTGTGATTTGTGGGAGATTCAGTTTGACAAAGGCCTAGGTTTTTTAATTCTAAG]
[-] EMBL CB673581             [                                                         CGCCGACGCGGACGACGAGGACGCCACCACGGAGCGCGCCGATGACGCCGCGGCGGGCGTCCGGTTCATAGACTTTTTCGCCCGCGCCGACGCGCGGCGGCG   CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA TGCGTCGGCGGA GCATTGCAGGGAGCAGGAGAGGACGAGCCGGA ACGGCGGCGCCGCCGCCGGGGACGCCTCCGATTAAGAT     AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAAGGAAATCGCCCCC   AAAAAAAAAATGCAGGA GGACAAGA CAGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT AGGGTAAAATT AATGTATCTGATTTTTAATCaaaa                                                                                                                                                                                                                          ]
[-] EMBL CB660102             [                                                         CGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTTTTCGCCCGCGCCGACGCGCGGCGGCG   CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA TGCGTCGGCGGA GCATTGCAGGGAGCAGGAGACGACGAGCCGGA ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCT     AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCC   AAAAAAAAAATGCAGGA GGACAAGA GGGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCATTAA C GGTAAAACT AATGTA                                                                                                                                                                                                                                            ]




>consensus_10612#0
AGCTACCCTAGCCTTACTAAAGGGAATAGCTTGCGGCGCGTCTACAGCCAGCCCCACCGC
CGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCG
GTTCATCGACTTTTTCGCCCGCGCCGACGCGCGGCGGCGCCGCGCGGCGTCGCCGGTGTC
GTCGAGCTGCGTGACGGACGCGTCGGCGGAGCATTGCAGGGAGCAGGAGACGACGAGCCG
GAACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCTAGGCAAGGCAAGCCTTGCAA
GATTGTAGCAAGAAAGAGGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGC
CCCCAAAAAAAAAATGCAGGAGGACAAGACAGAGAGTAGCTCAAGAGTGTTCAGTGTAGC
TCAAGATCTGTTAAAACTAATGTATCTGATTTTTAATCTGCTGTTTTTTGTTTTGTGTTT
TATTTCACAGTGCCACACGCACCCGGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAA
TTCGCATTAAATTGGATTAGTTTTTTTTTTTTTTTACAAAATTCAGTTTGACTTAAGTTG
GTCCCAAGCAAATGTGTAAATTGTGATTTGTGGGAGATTCAGTTTGACACGTCCCTAGGT
TTTTTAATTCTAAG
clustalw multiple alignements is not computed in this case