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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10625#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2666 fasta sequence
[GACGCGTCCAAGCAGAATCCCAAATCCCAAGCCCTCTCTCTCTCTCGCTCGCTCACGCAGGAGCGAGAGATCCCACTCTCTCCCCACCATTTCCCCCCCCCCCCTCTGTGTCCCCTCCTCCTCCTCTACACCTGGTTGGGCATGGCGCTGCGGCGCGGGTGGAGACGAGCGGCGGCGGCGGTTGTTCTTCCTGCCGCCTCCGTGGAGTGAACCACCGACGACGACGACGAACAAGATGACATTTTGAGCACCGCGTGCTAACTTCACAGAGGGTGAGAGAACCCCCCTCTGTGTTGATTCTTTTTCTTGGGCTAGAAGTATTTCGGTTAGATATGCCAAGTTCCGAATCAGACAGGGATGATATCTTCTTTGATGCATTTGATGATGTTACTTCAACAAGGGAGCCTTCATTGTCAGATGATTGCAGCACAAGTGACGAAGGATTAGCATCAAGGAGATTTGAGTATGATATTTGGGGAAACGAGCCAATGAGTGTTGAAGAAAGGCGGCAAAGGTTCCTGAAGGGAATGGGGTTTGATGAATTTCTTGCTACCAGAGTGGATTTTTCTCAACCACAGGGAGAAATCACAACTGTTGGTCCTTTCGCTGACTTGGGGTTGGAGGAGAGTACTACCAGTGACATTTCTTCCGTGAATTCATCTGTTCCTGAGAATGAATCAGTTTCTGATGCCTCCTGTTGCATAGGAGATATTGACAGTGGCGAGAGATACACAGTTCAGAATGATGGATACGGCGAATTGACTAGCATGCTTAAGGATGTGGCATCACATAAGGTGGTGTCTCTTCTGGAGTTTGATGGCGTACCAGGCCTTTCTCAATCTGTTCAAAAGTTGTTGCGCAAGGTGTATAGCAGTTCTATGGAAGAGAAAAAGAATGTGTTTAATAAGAAAAAGGGTGTCAAGAGCTTGTGGAAGAGCTTCATGAAAAACAGGAGTTTTGGTGGAATTTGCAAGCACGACGTCAATGTAAAAAACTGCACAATAGGCATACCATCCAGAACAAAAGTTCAACATCGAAAGAAAAAAACTATGGAATTTTCTGCTGTCCATCTGGGTCAAGAAATCCAAGCTCACAAGGGTTTAATTAAAGTCATGAAATTCAGCCCGTCAGGCTGGTATTTGGCAACTGGTGGTGAGGACTGCATTGTACGGATATGGCAGATTATGGAAGTGGAAGCATCTTCGAAGTTGCATGGGGGAGACAACCCTCAGAACTATGATGATAAAATT-ACAATCATCAAAACGGAACTAGGAAGAGGGAAGAATCATGCCCTTGCAGTAGTGCCAAAGAAGGGTTTCCGCATTTCAGAGACTCCATTACATGAATTCCAAGGCCATACAGATGATATCCTGGATATGGCATGGTCAGAGTCAGATTATCTCTTGACCTCATCAAAAGATAAGATGGTGCGTTTGTGGAAAGTTGGCTGTGATGGTTGTCTTGGACTGTTTAAACACAAAGACTACGTGACATGTGTTCAATTCAATCCTATCGATGAAAGATACTTCATCAGTGGTTCAATAGATGGAAAAGTTCGTGTTTGGGATGCTTTGGATAAGAGAGTAGTTGACTGGACTGATACACGGAAGATCATAACTGCTCTTAGTTACCAACCGGATGGAAAGGGCTTTATTGTTGGCACTACTTCTGGAGAATGCCGCTTTTACGATCAATCAGGTGAAAACATCCAACTAGACAAAGAATTGTTTATGCAAGGGAAGAAGTCTGCTGTCCATCGGGTCAACAGTCTGCAGTCACGTTCAAGTGATTCCTCTAGGATTACAATAACATCAACGGGTTCCAAAATTCGAGTTGCCGATGGTGTTGATATCATTCAAAAGTTTGAAGGGCCTTGGAATTTGAAGGCTCTTTCTTCACCATCTTTAACATCAGATGGAAGATATCTCATATCTGCCGGATTGGATTCCAATGTCTACATCTGGAACTTTGACATTCCAAGTGTCGCCGATCATAAAGGCGAAGCTAAATCGGTTCGCTCCTGTGAGAAATTCTTCTCCAAGGACGTGACAACCGCGGTACCATGGCCCGGGCTGCATCAAGAAAGACAGCAGGTGAAGAATTCTTCCAGCCTGACTGAAGAATCCGTCAGTTCACCCATTTTGCACCGCCACGGGGAACGCCGTTCCCCCGCAGCGCGGTGT-TTCGCTGACGGCATGAAGGGTACTCCGACATGGCCGGAGGAGAAGCTTCCACCTGCAAAAGCCGCTGATGCCCCACGACTGTCTGACTGTCTCTCCACGATCTCGCCTGCTTGGAACACGGTGATCGTGACTGCAAGTCGAGACGGTGTGATCA-GGTCTTTCCACAACTACGGCTTGCCTGTGAGATTGTGATGATCTGCAAATGCAAGGCAATCAGCTTTGGTATAGTCTGACTCTGATTTGCGTGCGTGCGTGAGTGTGTTCGCTGAAGAAGAAGCTACAGAAAACTGTAGCTTTGGTGATAGCCTTTACTAACACAGTAAAGTTTTTTTGTTGGTAGTAGATGGTAGGAAGGTGAGGAGAGGATCTTATTTTTTTTGTACTGCGAATTCAGAATCTGAACTTGTGGTGCTTGTCGAAATGAGGTGGTCAATCCAGAAGCGTTTTTTCCCTCTTGTCCNAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK067483 [GACGCGTCCAAGCAGAATCCCAAATCCCAAGCCCTCTCTCTCTCTCGCTCGCTCACGCAGGAGCGAGAGATCCCACTCTCTCCCCACCATTTCCCCCCCCCCCCTCTGTGTCCCCTCCTCCTCCTCTACACCTGGTTGGGCATGGCGCTGCGGCGCGGGTGGAGACGAGCGGCGGCGGCGGTTGTTCTTCCTGCCGCCTCCGTGGAGTGAACCACCGACGACGACGACGAACAAGATGACATTTTGAGCACCGCGTGCTAACTTCACAGAGGGTGAGAGAACCCCCCTCTGTGTTGATTCTTTTTCTTGGGCTAGAAGTATTTCGGTTAGATATGCCAAGTTCCGAATCAGACAGGGATGATATCTTCTTTGATGCATTTGATGATGTTACTTCAACAAGGGAGCCTTCATTGTCAGATGATTGCAGCACAAGTGACGAAGGATTAGCATCAAGGAGATTTGAGTATGATATTTGGGGAAACGAGCCAATGAGTGTTGAAGAAAGGCGGCAAAGGTTCCTGAAGGGAATGGGGTTTGATGAATTTCTTGCTACCAGAGTGGATTTTTCTCAACCACAGGGAGAAATCACAACTGTTGGTCCTTTCGCTGACTTGGGGTTGGAGGAGAGTACTACCAGTGACATTTCTTCCGTGAATTCATCTGTTCCTGAGAATGAATCAGTTTCTGATGCCTCCTGTTGCATAGGAGATATTGACAGTGGCGAGAGATACACAGTTCAGAATGATGGATACGGCGAATTGACTAGCATGCTTAAGGATGTGGCATCACATAAGGTGGTGTCTCTTCTGGAGTTTGATGGCGTACCAGGCCTTTCTCAATCTGTTCAAAAGTTGTTGCGCAAGGTGTATAGCAGTTCTATGGAAGAGAAAAAGAATGTGTTTAATAAGAAAAAGGGTGTCAAGAGCTTGTGGAAGAGCTTCATGAAAAACAGGAGTTTTGGTGGAATTTGCAAGCACGACGTCAATGTAAAAAACTGCACAATAGGCATACCATCCAGAACAAAAGTTCAACATCGAAAGAAAAAAACTATGGAATTTTCTGCTGTCCATCTGGGTCAAGAAATCCAAGCTCACAAGGGTTTAATTAAAGTCATGAAATTCAGCCCGTCAGGCTGGTATTTGGCAACTGGTGGTGAGGACTGCATTGTACGGATATGGCAGATTATGGAAGTGGAAGCATCTTCGAAGTTGCATGGGGGAGACAACCCTCAGAACTATGATGATAAAATT ACAATCATCAAAACGGAACTAGGAAGAGGGAAGAATCATGCCCTTGCAGTAGTGCCAAAGAAGGGTTTCCGCATTTCAGAGACTCCATTACATGAATTCCAAGGCCATACAGATGATATCCTGGATATGGCATGGTCAGAGTCAGATTATCTCTTGACCTCATCAAAAGATAAGATGGTGCGTTTGTGGAAAGTTGGCTGTGATGGTTGTCTTGGACTGTTTAAACACAAAGACTACGTGACATGTGTTCAATTCAATCCTATCGATGAAAGATACTTCATCAGTGGTTCAATAGATGGAAAAGTTCGTGTTTGGGATGCTTTGGATAAGAGAGTAGTTGACTGGACTGATACACGGAAGATCATAACTGCTCTTAGTTACCAACCGGATGGAAAGGGCTTTATTGTTGGCACTACTTCTGGAGAATGCCGCTTTTACGATCAATCAGGTGAAAACATCCAACTAGACAAAGAATTGTTTATGCAAGGGAAGAAGTCTGCTGTCCATCGGGTCAACAGTCTGCAGTCACGTTCAAGTGATTCCTCTAGGATTACAATAACATCAACGGGTTCCAAAATTCGAGTTGCCGATGGTGTTGATATCATTCAAAAGTTTGAAGGGCCTTGGAATTTGAAGGCTCTTTCTTCACCATCTTTAACATCAGATGGAAGATATCTCATATCTGCCGGATTGGATTCCAATGTCTACATCTGGAACTTTGACATTCCAAGTGTCGCCGATCATAAAGGCGAAGCTAAATCGGTTCGCTCCTGTGAGAAATTCTTCTCCAAGGACGTGACAACCGCGGTACCATGGCCCGGGCTGCATCAAGAAAGACAGCAGGTGAAGAATTCTTCCAGCCTGACTGAAGAATCCGTCAGTTCACCCATTTTGCACCGCCACGGGGAACGCCGTTCCCCCGCAGCGCGGTGT TTCGCTGACGGCATGAAGGGTACTCCGACATGGCCGGAGGAGAAGCTTCCACCTGCAAAAGCCGCTGATGCCCCACGACTGTCTGACTGTCTCTCCACGATCTCGCCTGCTTGGAACACGGTGATCGTGACTGCAAGTCGAGACGGTGTGATCA GGTCTTTCCACAACTACGGCTTGCCTGTGAGATTGTGATGATCTGCAAATGCAAGGCAATCAGCTTTGGTATAGTCTGACTCTGATTTGCGTGCGTGCGTGAGTGTGTTCGCTGAAGAAGAAGCTACAGAAAACTGTAGCTTTGGTGATAGCCTTTACTAACACAGTAAAGTTTTTTTGTTGGTAGTAGATGGTAGGAAGGTGAGGAGAGGATCTTATTTTTTTTGTACTGCGAATTCAGAATCTGAACTTGTGGTGCTTGTCGAAATGAGGTGGTCAATCCAGAAGCGTTTTTTC ]
[+] EMBL AU166637 [ ACGACGAACAAGATGACATTTTGAGCACCGCGTGCTAACTTCACAGAGGGTGAGAGAACCCCCCTCTGTGTTGATTCTTTTTCTTGGGCTAGAAGTATTTCGGTTAGATATGCCAAGTTCCGAATCAGACAGGGATGATATCTTCTTTGATGCATTTGATGATGTTACTTCAACAAGGGAGCCTTCATTGTCAGATGATTGCAGCACAAGTGACGAAGGATTAGCATCAAGGAGATTTGAGTATGATATTTGGGGAAACGAGCCAATGAGTGTTGAAGAAAGGCGGCAAAGGTTCCTGAAGGGAATGGGGTTTGATGAATTTCTTGCTACCAGAGTGGATTTTTCTCAACCACAGGGAGAAATCACAACTGTTGGTCCTTTCGCTGACTTGGGGTTGGAGGAG ]
[+] EMBL CB632095 [ CATCAAGGAGATTTGAGTATGATATTTGGGGAAACGAGCCAATGAGTGTTGAAGAAAGGCGGCAAAGGTTCCTGAAGGGAATGGGGTTTGATGAATTTCTTGCTACCAGAGTGGATTTTTCTCAACCACAGGGAGAAATCACAACTGTTGGTCCTTTCGCTGACTTGGGGTTGGAGGAGAGTACTACCAGTGACATTTCTTCCGTGAATTCATCTGTTCCTGAGAATGAATCAGTTTCTGATGCCTCCTGTTGCATAGGAGATATTGACAGTGGCGAGAGATACACAGTTCAGAATGATGGATACGGCGAATTGACTAGCATGCTTAAGGATGTGGCATCACATAAGGTGGTGTCTCTTCTGGAGTTTGATGGCGTACCAGGCCTTTCTCAATCTGTTCAAAAGTTGTTGCGCAAGGTGTATAGCAGTTCTATGGAAGAGAAAAAGAATGTGTTTAATAAGAAAAAGGGTGTCAAGAGCTTGTGGAAGAGCTTCATGAAAAACAGGAGTTTTGGTGGAATTTGCAAGCACGACATCAATGTAAAAAACTGCACAATAGGCATACCATCCAGAACAAAAGTTCAACATCGAAAGAAAAAAACTATGGAATTTTCTGCTGTCCATCTGGGTCAAGAAATCCAAGCTCACAAGGGTTTAATTAAAGTCATGAAATTCAGCCCGTCAGGCTGGTATTTGGCAACTGGTGGTGAGGACTGCATTGTACGGATATGGCAGATTATGGAAGTGGAAGCATCTTCGAAGTTGCATGGGGGAGACAACCCTCAGAATTATGATGATAAAATTCACA ]
[-] EMBL CB632096 [ TCGAGTTGCCGATGGTGTTGATATCATTCAAAAGTTTGAAGGGCCTTGGAATTTGAAGGCTCTTTCTTCACCATCTTTAACATCAGATGGAAGATATCTCATATCTGCCGGATTGGATTCCAATGTCTACATCTGGAACTTTGACATTCCAAGTGTCGCCGATCATAAAGGCGAAGCTAAATCGGTTCGCTCCTGTGAGAAATTCTTCTCCAAGGACGTGACAACCGCGGTACCATGGCCCGGGCTGCATCAAGAAAGACAGCAGGTGAAGAATTCTTCCAGCCTGACTGAAGAATCCGTCAGTTCACCTATTTTGCACCGCCACGGGGAACGCCGTTCCCCCGCAGCGCGGTGT TTCGCTGACGGCATGAAGGGTACTCCGACATGGCCGGAGGAGAAGCTTCCACCTGCAAAAGCCGCTGATGCCCCACGACTGTCTGACTGTCTCTCCACGATCTCGCCTGCTTGGAACACGGTGATCGTGACTGCAAGTCGAGACGGTGTGATCA GGTCTTTCCACAACTACGGCTTGCCTGTGAGATTGTGATGATCTGCAAATGCAAGGCAATCAGCTTTGGTATAGTCTGACTGTGATTTGCGTGCGTGCGTGAGTGTGTTCGCTGAAGAAGAAGCTACAGAAAACTGTAGCTTTGGTGATAGCCTTTACTAACACAGTAAAGTTTTTTTGTTGGTAGTAGATGGTAGGAAGGGGGGGAGAGGATCTTATTTTTTTTGTACTGCGAATTCAGAATCTGAACTTGTGGTGC ]
[+] EMBL OSC543 [ TCCTGTGAGAAATTCTTCTCCAAGGACGTGACAACCGCGGTACCATGGCCCGGGCTGCATCAAGAAAGACAGCAGGTGAAGAATTCTTCCAGCCTGACTGAAGAATCCGTCAGTTCACCCATTTTGCACCGCCACGGGGAACGCCGTT CCCCGCAGCG GTNGTNTTCGCTGACGGCATGAAGGGTACTCCGACATGGCCGGA GAGAAGCTTCCACCTGCAAAAGCCGCTGATGCCCCACGACTGTCTGACTGTCTCTCCACGATCTCGCCTGCTTGGAACACGGTGATCGTGACTGCAAGTCGAGACGGTGTGATCAGGGTCTTTNCACAACTACG ]
[+] EMBL AU166636 [ CTCCACGATNTCGCCTGCTTGGAACNCGGTGATCGTGACTGCAAGTCGANACGGTGTGATCA GGTCTTTCCNCAACTACGGCTTGCCTGTGAGATTGTGATGATCTGCAAATGCAAGGCAATCAGCTTTGGTATAGTCTGACTCTGATTTGCGNGCGTGCGTNAGTGTGTTCGCTGAANAANAAGCTACAGAAAACTGTAGCTTTGGTGANAGCCTTTACTAACCCAGTAAAGTTTTTTTGTTGGTAGTANATGGTAGGAAGGTNAGGAAAGGATCTTATTTTTTTTGTACTGCGAATTCAGAATNTGAACTTGTGGTGCTTGTCGAAATGAGGTGGTCAATCCAGAAGCGTTTTTTCCCTCTTGTCCNAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF333653 [ ACTGCGAATTCAGAATCTGAACTTGTGGTGCTTGTCGAAACGAGGTGGTCAATCCAGAAGCGT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||