|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10628#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2639 fasta sequence
[CAACCCCTCCAGTTGCCCACCAGAAGGAGCAAACAGAGAGAGGCAGAAGGCAAGCTGCAGTGTTGGGGGAGAAGAAAGGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGAGGCAGTGGCAGAGGCAGAGGAAGGGAAAGAAAGCTCCAATCTCGCCTCTGCTCCTGTCTCCAGGAAATCTTGATGCTTGCACATAAATAGGTGATTCCAAGATTGGACATTTGGTACGCGAGCTCTGAGCTATCCAAGAACTTGGTGGTGAAGATGTCAGTGATCCATGCGGAGGACATCGAGATATCGCTGTGCGACGGCAACTCGGAGGACGAGCGGCGGCGGCGGAGGATCGGGTCCAACCTTCGCCGGAAGGCCATCCACGCGATCAAGAAGCGCGGCCGGCGGCGCGTCGACTGCCGCTTCCCGCCGGCCATCTCCATCGAGGACGTCCGCGACGCCGAGGAGGAGCGCGCTGTCGCCGCCTTCCACGACCGCCTCGCCGCCCACGGCCTCCTCCCCGACAAGCATGACGACTACCACATGATGCTGAGGTTCTTGAAGGCCAGGAAGTTTGATATCGACAGGGCAATGCAGATGTGGGCAGACATGCTGAAATGGAGGGAAGAGTTCGGAGCTGACACAATCCTTCAGGATTTTGATTTTCATGAACTGGATGAAGTGCTGCGCTACTACCCTCAGGGCTACCACGGTGTCGACCGGGAGGGCCGCCCAGTGTACATCGAGAGGCTCGGCAAGGTCGACCCGAACAAGCTCATGCAGATCACCTCGGTGGACCGCTACATCAAGTACCATGTTCAGGAGTTTGAGAGGGCCTTCAGGGAGAGGTTTCCTGCCTGCACATTGGCGGCAAAGAGGCACATTGATTCCACCACCACCATCTTGGATGTTCAGGGAGTGGGATTTAAGAATTTCTCAAAGACTGCGAGGGAGCTTATCAACCGAATGCAGAAGATAGACAGTGACTATTACCCTGAGACATTACATCAAATGTTTGTCGTGAACGCCGGCAGCGGGTTCAAGTTGATCTGGAATAGCGTGAAGGGCTTTCTGGACCCAAAAACTTCATCCAAGATTCATGTTCTTGGTTCGAATTACCAGAGTAGACTTCTTGAAGTAATTGATTCCAGTGAGTTACCGGACTTCCTCGGTGGGTCATGCTCATGCAGTGACAAGGGTGGTTGTCTTGGGTCGAATAAAGGCCCATGGAATGATCCTTTCATTTTGAAGCTGATACACAATTTGGAGGCTGGTTGCGTCAGAGAGATCAAGCCAGTGTCTGACGGTGAAGAAAGAAGCAGCTCATCCCTTCGGTT-GGAGCAGCCGAAGTGGCAGGGCATGATTAGCGACATATCAAATGCTGAGTCAGGGTCAGACGTTGATGATTTT--GGTTCTTTCTTTCAGAAAGGTGTTGACTATGGTTACCTCACTCCAGTCCATGAGGAAGTAAGGGGAACAGATTCTTTGACTTACTATAGCTGTGATGACCAGACTCGTCGAGATATAGCTCCTGAATCTTGTAAGGGAGTGCAAGCTACTGGAATGGTGCAGAATCAGCTACCTGATAACAGGCAACCCTCCACAAATCGGAACCCACATGACTCAGGAAACAATGGTCACTTGGATGGTGCATTTGCTCGAAGGAGTTTGCAAAATTATATTCAAGTTGTTGTCACAACCTTTATCAAGCTACTCTCCTTCCTCCGTCTCTTCATCTCCAGACCAGTGAGGAGGCTCGAGAATGTCCATTCTTGTACCGTACCTGTCCCATCTGAAGAAAAGCCAGAGCCTCGATCTATACGTGATGATGATATGACCATGTGCTTACAACGTCTTGACAGTCTCGAATCTTTGTGTAACCATCTAGCCAGCAGGCCACCAGAGATACCCAGAGAGAAAGAGCATATGCTACTGAACTCTTTTGAGCGGATCAAATGCATTGAGGCTGACCTGGAGAGGACCAAAAGAGTGCTGCACGCAACGGTGGTGAAGCAGAAAGCGCTTGTGGAGACTCTGGAAGCTGTACAGGAGTCATCAAGAGCTAGGAAGAGATTGTTTTGTTCATAGAATATACCGCACCAAGTCAAGAACCATGTCGACATTTAACCGCGACGCATGAAGCTCTGCCAGTGCCATTTTTGACCTTCCCCAACTTCATCCCGGGCCAGGGAAAAAACCTGAAAGAGAAGAGAAGATAGCATTTGGTGATATAGCCTGCTAAGCTGCTTCCTTTCAGCATCTCACCATC-TTTTTTTTTTGTAGTTGTCTGTACTAGTAAAGCCCTTCTCTTGTGCCTGGTGAATGTTGTGCCGTGCTTAGTGCAGCTATGTTTTTTCTTTTTTGGCCAGCAAGTGATCTCGTCACGGTCTTTTGCATTCAGGGGGCAAGAAGAAAAGATGGCCGAACTGCATGTTGATGAGTCTGAAAGTTTTTTTACAGCTGACCTCCATTTAGTTGACAAAAGGGCACAATTGGTGATAGCTTACTGGTGAAAATGTCCCATGTAAATGCTGCTTTTAGTACTAGTTTATTACAGTGCTACCTCCTATGAATGATTATCGGATAATACAGTTCTAGTTAGATTATAATCACAATGGGATAGTAGTACAATTGTGTGCTT]
[+] EMBL AK070235 [CAACCCCTCCAGTTGCCCACCAGAAGGAGCAAACAGAGAGAGGCAGAAGGCAAGCTGCAGTGTTGGGGGAGAAGAAAGGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGAGGCAGTGGCAGAGGCAGAGGAAGGGAAAGAAAGCTCCAATCTCGCCTCTGCTCCTGTCTCCAGGAAATCTTGATGCTTGCACATAAATAGGTGATTCCAAGATTGGACATTTGGTACGCGAGCTCTGAGCTATCCAAGAACTTGGTGGTGAAGATGTCAGTGATCCATGCGGAGGACATCGAGATATCGCTGTGCGACGGCAACTCGGAGGACGAGCGGCGGCGGCGGAGGATCGGGTCCAACCTTCGCCGGAAGGCCATCCACGCGATCAAGAAGCGCGGCCGGCGGCGCGTCGACTGCCGCTTCCCGCCGGCCATCTCCATCGAGGACGTCCGCGACGCCGAGGAGGAGCGCGCTGTCGCCGCCTTCCACGACCGCCTCGCCGCCCACGGCCTCCTCCCCGACAAGCATGACGACTACCACATGATGCTGAGGTTCTTGAAGGCCAGGAAGTTTGATATCGACAGGGCAATGCAGATGTGGGCAGACATGCTGAAATGGAGGGAAGAGTTCGGAGCTGACACAATCCTTCAGGATTTTGATTTTCATGAACTGGATGAAGTGCTGCGCTACTACCCTCAGGGCTACCACGGTGTCGACCGGGAGGGCCGCCCAGTGTACATCGAGAGGCTCGGCAAGGTCGACCCGAACAAGCTCATGCAGATCACCTCGGTGGACCGCTACATCAAGTACCATGTTCAGGAGTTTGAGAGGGCCTTCAGGGAGAGGTTTCCTGCCTGCACATTGGCGGCAAAGAGGCACATTGATTCCACCACCACCATCTTGGATGTTCAGGGAGTGGGATTTAAGAATTTCTCAAAGACTGCGAGGGAGCTTATCAACCGAATGCAGAAGATAGACAGTGACTATTACCCTGAGACATTACATCAAATGTTTGTCGTGAACGCCGGCAGCGGGTTCAAGTTGATCTGGAATAGCGTGAAGGGCTTTCTGGACCCAAAAACTTCATCCAAGATTCATGTTCTTGGTTCGAATTACCAGAGTAGACTTCTTGAAGTAATTGATTCCAGTGAGTTACCGGACTTCCTCGGTGGGTCATGCTCATGCAGTGACAAGGGTGGTTGTCTTGGGTCGAATAAAGGCCCATGGAATGATCCTTTCATTTTGAAGCTGATACACAATTTGGAGGCTGGTTGCGTCAGAGAGATCAAGCCAGTGTCTGACGGTGAAGAAAGAAGCAGCTCATCCCTTCGGTT GGAGCAGCCGAAGTGGCAGGGCATGATTAGCGACATATCAAATGCTGAGTCAGGGTCAGACGTTGATGATTTT GGTTCTTTCTTTCAGAAAGGTGTTGACTATGGTTACCTCACTCCAGTCCATGAGGAAGTAAGGGGAACAGATTCTTTGACTTACTATAGCTGTGATGACCAGACTCGTCGAGATATAGCTCCTGAATCTTGTAAGGGAGTGCAAGCTACTGGAATGGTGCAGAATCAGCTACCTGATAACAGGCAACCCTCCACAAATCGGAACCCACATGACTCAGGAAACAATGGTCACTTGGATGGTGCATTTGCTCGAAGGAGTTTGCAAAATTATATTCAAGTTGTTGTCACAACCTTTATCAAGCTACTCTCCTTCCTCCGTCTCTTCATCTCCAGACCAGTGAGGAGGCTCGAGAATGTCCATTCTTGTACCGTACCTGTCCCATCTGAAGAAAAGCCAGAGCCTCGATCTATACGTGATGATGATATGACCATGTGCTTACAACGTCTTGACAGTCTCGAATCTTTGTGTAACCATCTAGCCAGCAGGCCACCAGAGATACCCAGAGAGAAAGAGCATATGCTACTGAACTCTTTTGAGCGGATCAAATGCATTGAGGCTGACCTGGAGAGGACCAAAAGAGTGCTGCACGCAACGGTGGTGAAGCAGAAAGCGCTTGTGGAGACTCTGGAAGCTGTACAGGAGTCATCAAGAGCTAGGAAGAGATTGTTTTGTTCATAGAATATACCGCACCAAGTCAAGAACCATGTCGACATTTAACCGCGACGCATGAAGCTCTGCCAGTGCCATTTTTGACCTTCCCCAACTTCATCCCGGGCCAGGGAAAAAACCTGAAAGAGAAGAGAAGATAGCATTTGGTGATATAGCCTGCTAAGCTGCTTCCTTTCAGCATCTCACCATC TTTTTTTTTTGTAGTTGTCTGTACTAGTAAAGCCCTTCTCTTGTGCCTGGTGAATGTTGTGCCG ]
[+] EMBL AK068384 [ AGAGGCAGAAGGCAAGCTGCAGTGTTGGGGGAGAAGAAAGGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGAGGCAGTGGCAGAGGCAGAGGAAGGGAAAGAAAGCTCCAATCTCGCCTCTGCTCCTGTCTCCAGGAAATCTTGATGCTTGCACATAAATAGGTGATTCCAAGATTGGACATTTGGTACGCGAGCTCTGAGCTATCCAAGAACTTGGTGGTGAAGATGTCAGTGATCCATGCGGAGGACATCGAGATATCGCTGTGCGACGGCAACTCGGAGGACGAGCGGCGGCGGCGGAGGATCGGGTCCAACCTTCGCCGGAAGGCCATCCACGCGATCAAGAAGCGCGGCCGGCGGCGCGTCGACTGCCGCTTCCCGCCGGCCATCTCCATCGAGGACGTCCGCGACGCCGAGGAGGAGCGCGCTGTCGCCGCCTTCCACGACCGCCTCGCCGCCCACGGCCTCCTCCCCGACAAGCATGACGACTACCACATGATGCTGAGGTTCTTGAAGGCCAGGAAGTTTGATATCGACAGGGCAATGCAGATGTGGGCAGACATGCTGAAATGGAGGGAAGAGTTCGGAGCTGACACAATCCTTCAGGATTTTGATTTTCATGAACTGGATGAAGTGCTGCGCTACTACCCTCAGGGCTACCACGGTGTCGACCGGGAGGGCCGCCCAGTGTACATCGAGAGGCTCGGCAAGGTCGACCCGAACAAGCTCATGCAGATCACCTCGGTGGACCGCTACATCAAGTACCATGTTCAGGAGTTTGAGAGGGCCTTCAGGGAGAGGTTTCCTGCCTGCACATTGGCGGCAAAGAGGCACATTGATTCCACCACCACCATCTTGGATGTTCAGGGAGTGGGATTTAAGAATTTCTCAAAGACTGCGAGGGAGCTTATCAACCGAATGCAGAAGATAGACAGTGACTATTACCCTGAGACATTACATCAAATGTTTGTCGTGAACGCCGGCAGCGGGTTCAAGTTGATCTGGAATAGCGTGAAGGGCTTTCTGGACCCAAAAACTTCATCCAAGATTCATGTTCTTGGTTCGAATTACCAGAGTAGACTTCTTGAAGTAATTGATTCCAGTGAGTTACCGGACTTCCTCGGTGGGTCATGCTCATGCAGTGACAAGGGTGGTTGTCTTGGGTCGAATAAAGGCCCATGGAATGATCCTTTCATTTTGAAGCTGATACACAATTTGGAGGCTGGTTGCGTCAGAGAGATCAAGCCAGTGTCTGACGGTGAAGAAAGAAGCAGCTCATCCCTTCGGTT GGAGCAGCCGAAGTGGCAGGGCATGATTAGCGACATATCAAATGCTGAGTCAGGGTCAGACGTTGATGATTTT GGTTCTTTCTTTCAG ]
[+] EMBL CB655202 [ GGAACCAAAGCTCCAATCTCGCCTCTGCTCCTGTCTCCAGGAAATCTTGATGCTTGCACATAAATAGGTGATTCCAAGATTGGACATTTGGTACGCGAGCTCTGAGCTATCCAAGAACTTGGTGGTGAAGATGTCAGTGATCCATGCGGAGGACATCGAGATATCGCTGTGCGACGGCAACTCGGAGGACGAGCGGCGGCGGCGGAGGATCGGGTCCAACCTTCGCCGGAAGGCCATCCACGCGATCAAGAAGCGCGGCCGGCGGCGCGTCGACTGCCGCTTCCCGCCGGCCATCTCCATCGAGGACGTCCGCGACGCCGAGGAGGAGCGCGCTGTCGCCGCCTTCCACGACCGCCTCGCCGCCCACGGCCTCCTCCCCGACAAGCATGACGACTACCACATGATGCTGAGGTTCTTGAAGGCCAGGAAGTTTGATATCGACAGGGCAATGCAGATGTGGGCAGACATGCTGAAATGGAGGGAAGAGTTCGGAGCTGACACAATCCTTCAGGATTTTGATTTTCATGAACTGGATGAAGTGCTGCGCTACTACCCTCAGGGCTACCACGGTGTCGACCGGGAGGGCCGCCCAGTGTACATCGAGAGGCTCGGCAAGGTCGACCCGAACAAGCTCATGCAGATCACCTCGGTGGACCGCTACATCAAGT ]
[+] EMBL AK059604 [ TCATGAACTGGATGAAGTGCTGCGCTACTACCCTCAGGGCTACCACGGTGTCGACCGGGAGGGCCGCCCAGTGTACATCGAGAGGCTCGGCAAGGTCGACCCGAACAAGCTCATGCAGATCACCTCGGTGGACCGCTACATCAAGTACCATGTTCAGGAGTTTGAGAGGGCCTTCAGGGAGAGGTTTCCTGCCTGCACATTGGCGGCAAAGAGGCACATTGATTCCACCACCACCATCTTGGATGTTCAGGGAGTGGGATTTAAGAATTTCTCAAAGACTGCGAGGGAGCTTATCAACCGAATGCAGAAGATAGACAGTGACTATTACCCTGAGACATTACATCAAATGTTTGTCGTGAACGCCGGCAGCGGGTTCAAGTTGATCTGGAATAGCGTGAAGGGCTTTCTGGACCCAAAAACTTCATCCAAGATTCATGTTCTTGGTTCGAATTACCAGAGTAGACTTCTTGAAGTAATTGATTCCAGTGAGTTACCGGACTTCCTCGGTGGGTCATGCTCATGCAGTGACAAGGGTGGTTGTCTTGGGTCGAATAAAGGCCCATGGAATGATCCTTTCATTTTGAAGCTGATACACAATTTGGAGGCTGGTTGCGTCAGAGAGATCAAGCCAGTGTCTGACGGTGAAGAAAGAAGCAGCTCATCCCTTCGGTT GGAGCAGCCGAAGTGGCAGGGCATGATTAGCGACATATCAAATGCTGAGTCAGGGTCAGACGTTGATGATTTT GGTTCTTTCTTTCAGAAAGGTGTTGACTATGGTTACCTCACTCCAGTCCATGAGGAAGTAAGGGGAACAGATTCTTTGACTTACTATAGCTGTGATGACCAGACTCGTCGAGATATAGCTCCTGAATCTTGTAAGGGAGTGCAAGCTACTGGAATGGTGCAGAATCAGCTACCTGATAACAGGCAACCCTCCACAAATCGGAACCCACATGACTCAGGAAACAATGGTCACTTGGATGGTGCATTTGCTCGAAGGAGTTTGCAAAATTATATTCAAGTTGTTGTCACAACCTTTATCAAGCTACTCTCCTTCCTCCGTCTCTTCATCTCCAGACCAGTGAGGAGGCTCGAGAATGTCCATTCTTGTACCGTACCTGTCCCATCTGAAGAAAAGCCAGAGCCTCGATCTATACGTGATGATGATATGACCATGTGCTTACAACGTCTTGACAGTCTCGAATCTTTGTGTAACCATCTAGCCAGCAGGCCACCAGAGATACCCAGAGAGAAAGAGCATATGCTACTGAACTCTTTTGAGCGGATCAAATGCATTGAGGCTGACCTGGAGAGGACCAAAAGAGTGCTGCACGCAACGGTGGTGAAGCAGAAAGCGCTTGTGGAGACTCTGGAAGCTGTACAGGAGTCATCAAGAGCTAGGAAGAGATTGTTTTGTTCATAGAATATACCGCACCAAGTCAAGAACCATGTCGACATTTAACCGCGACGCATGAAGCTCTGCCAGTGCCATTTTTGACCTTCCCCAACTTCATCCCGGGCCAGGGAAAAAACCTGAAAGAGAAGAGAAGATAGCATTTGGTGATATAGCCTGCTAAGCTGCTTCCTTTCAGCATCTCACCATCTTTTTTTTTTTGTAGTTGTCTGTACTAGTAAAGCCCTTCTCTTGTGCCTGGTGAATGTTGTGCCGTGCTTAGTGCAGCTATGTTTTTTCTTTTTTGGCCAGCAAGTGATCTCGTCACGGTCTTTTGCATTCAGGGGGCAAGAAGAAAAGATGGCCGAACTGCATGTTGATGAGTCTGAAAGTTTTTTTACAGCTGACCTCCATTTAGTTGACAAAAGGGCACAATTGGTGATAGCTTACTGGTGAAAATGTCCCATGTAAATGCTGCTTTTAGTACTAGTTTATTACAGTGCTACCTCCTATGAATGATTATCGGATAATACAGTTCTAGTTAGATTATAATCACAATGGGATAGTAGTACAA ]
[+] EMBL OSS12501A [ CGTGAAGGGCTTTCTGGACCCAAAAACTTCATCCAAGATTCATGTTCTTGGTTCGAATTACCAGAGTAGACTTCTTGAAGTAATTGATTCCAGTGAGTTACCGGACTTCCTCGGTGGGTCATGCTCATGCAGTGACAAGGGTGGTTGTCTTGGGTCGAATAAAGGCCCATGGAATGATCCTTTCATTTTGAAGCTGATACACAATTTGGAGGCTGGTTGCGTCAGAGAGATCAAGCCAGTGTCTGACGGTGAAGAAAGAAGCAGCTCATCCCTTCGGTTGGGAGCAGCCGAAGTTGCAGGGCATGATTAGCGACATATCAAATGCTGAGTCAGGGTCAAACGTTGATGATTTTGGGGTCCTTTCTTTCAANAAGG ]
[-] EMBL CB655203 [ ACCATGTGCTTACAACGTCTTGACAGTCTCGAATCTTTGTGTAACCATCTAGCCAGCAGGCCACCAGAGATACCCAGAGAGAAAGAGCATATGCTACTGAACTCTTTTGAGCGGATCAAATGCATTGAGGCTGACCTGGAGAGGACCAAAAGAGTGCTGCACGCAACGGTGGTGAAGCAGAAAGCGCTTGTGGAGACTCTGGAAGCTGTACAGGAGTCATCAAGAGCTAGGAAGAGATTGTTTTGTTCATAGAATATACCGCACCAAGTCAAGAACCATGTCGACATTTAACCGCGACGCATGAAGCTCTGCCAGTGCCATTTTTGACCTTCCCCAACTTCATCCCGGGCCAGGGAAAAAACCTGAAAGAGAAGAGAAGATAGCATTTGGTGATATAGCCTGCTAAGCTGCTTCCTTTCAGCATCTCACCATC TTTTTTTTTTGTAGTTGTCTGTACTAGTAAAGCCCTTCTCTTGTGCCTGGTGAATGTTGTGCCGTGCTTAGTGCAGCTATGTTTTTTCTTTTTTGGCCAGCAAGTGATCTCGTCACGGTCTTTTGCATTCAGGGGGCAAGAAGAAAAGATGGCCGAACTGCATGTTGATGAGTCTGAAAGTTTTTTTACAGCTGACCTCCATTTAGTTGACAAAAGGGCACAATTGGTGATAGCTTACTGGTGAAAATGTCCCATGTAAATGGTGCTTTTAGTACTAGTTTATTACAGTGCTACCTCCTATGAATGATTATCGGATAATACAGTTCTAGTTAGATTAGAATCACAATGGGATAGTAGTACAATTGTGTGCTT]
consensusID : consensus_10628#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1889 fasta sequence
[CAGTTATTTAGTTGATCACCGGCCACTCTTCTTCCTGATCTGCAGAGCTGCAGTCTCAGTCTGTCCTGCCGTCCATACAGCAACAGCAACGCAGGACTACAGGAGAGGTCGTAGCACTCTCGGTTTGTGCCGATTGGATCCAGAAAATTCAAGATCCAAATTTAATCCGGAAGCGAGACAATGTCAGTGAGCCATGGCGAGGAGCTCGAGATATCGCCGTGCGACCCGAACTCCGAGGATGACCGGCGGCGGCGCGGGATGGGGTCGTCGCTGCGGCGGAAGGCCATCCGCGCGCTCCGGAAGCGCGGCGGGCGGCGGCGGCGCCGCCGCGTCGACTTCCGGTACCCGGCCGCCATGTCCATCGAGGACGTCCGCGACGCCGAGGAGGAGCTCGCCGTCGCCGCGTTCCGCGACCGCCTCGCCGTGCACGCCCTCCTCCCCGACAAGCACGACGACTACCACATGATGCTCAGGTTTCTGAAGGCAAGAAAGTTTGATTCGGAGAAGGCGATGCAAATGTGGGCGGAGATGCTGCGATGGAGGAAGGAGTTCGGAGCCGACACGATCTTGGAGGAGTTCGAGTTCGATGAGCTCGACGACGTGCTCCGGTACTACCCTCAGGGCTACCATGGCGTCGATCGGGAAGGCCGGCCGGTGTACATCGAGAGGCTCGGCAAGGTGTATCCCAACAAGCTGATGCAGATCACCTCGGTGGACAGGTACATCAAGTACCATGTGCAGGAGTTCGAGAGGGCTTTCAGGGAGAGGTTCCCTGCCTGCACATTGGCGGCCAAGAGGCACATTGATTCCACAACCACCATACTGGATGTCCATGGCGTGGGGCTGAAGAATTTCTCAAAGACTGCAAGGGAGCTTGTTCACCGGATGCAGAAGATAGATAGTGATTACTATCCTGAGACATTACATCAGATGTATGTAGTGAATGCTGGCAGTGGCTTCAAGCTGATATGGAACAGTGTGAAAGGGTTTCTTGACCCAAAAACTTCTTCAAAGATTCATGTTCTTGGTACAAACTACCAGAGTAGACTTCTTGAAGTAATTGACAAAAGTGAATTGCCAGAGTTTCTTGGCGGTTCATGTACATGCAGTGAAGGTGGTTGCCTTGGTTCTAACAAAGGGCCGTGGAATGATCATGTCATTTTGAAGCTGATACACAGTATGAGGAGCAATAGTAGTATGAGGGAAATCAAGCAAGTTTCTGATAGCGAAGACAGGAGCGGATCTTCCCTAAGGGCAGAAAAATTGAAGGGGATGATGAGTGATATATCAAATGCTGAATCAGAGTCAGATGTTGATGAGTTCAGTTTATCAGCTGTCCTGAGGAGTACTGACTACAGTTTCCTTACTCCAGTTAGCGAAGAAGTTAAGGGATCAGATTCTTCAACTTTCTGTAGTTGTGAGTCTTGTGACAGGAAGGGTCTCCCAGATGTAACTCCTGAATCTTCTCAGTCTGTACAACAATCTTCTGAAATGGTGCCAAACCAACTGGTCTCTCATGAACATTCATCCACAACCAGATGGATGAATAATTTAGGGAACATGGCAATTAGTTTTCATGGCACTCTGACTGGAAGGACTTTGAGCAATTTCGTTAGAGTAGTAGGCACACTCATGATCAAGATACTAGCCGTTTTCAGCCTTTTTGTCAGTAGAAGAGGAAACATGCTAGAGAATGTTCATCCTTCTAATGTAGAAGATGAACCTCAGCCTCGAAGTGCAACGGAAGATAACATGAGTGCTTGTTTACAACGTCTTGAAAAACTTGAATCATTATGCAATCATCTCATGAGCAAACCTCCAGATATGCCAAAGGAGAAAGAGTGTCTACTGCTACAATCGTTTGATCGGATAAAAACCATCGAATCGGA]
[+] EMBL AK063554 [CAGTTATTTAGTTGATCACCGGCCACTCTTCTTCCTGATCTGCAGAGCTGCAGTCTCAGTCTGTCCTGCCGTCCATACAGCAACAGCAACGCAGGACTACAGGAGAGGTCGTAGCACTCTCGGTTTGTGCCGATTGGATCCAGAAAATTCAAGATCCAAATTTAATCCGGAAGCGAGACAATGTCAGTGAGCCATGGCGAGGAGCTCGAGATATCGCCGTGCGACCCGAACTCCGAGGATGACCGGCGGCGGCGCGGGATGGGGTCGTCGCTGCGGCGGAAGGCCATCCGCGCGCTCCGGAAGCGCGGCGGGCGGCGGCGGCGCCGCCGCGTCGACTTCCGGTACCCGGCCGCCATGTCCATCGAGGACGTCCGCGACGCCGAGGAGGAGCTCGCCGTCGCCGCGTTCCGCGACCGCCTCGCCGTGCACGCCCTCCTCCCCGACAAGCACGACGACTACCACATGATGCTCAGGTTTCTGAAGGCAAGAAAGTTTGATTCGGAGAAGGCGATGCAAATGTGGGCGGAGATGCTGCGATGGAGGAAGGAGTTCGGAGCCGACACGATCTTGGAGGAGTTCGAGTTCGATGAGCTCGACGACGTGCTCCGGTACTACCCTCAGGGCTACCATGGCGTCGATCGGGAAGGCCGGCCGGTGTACATCGAGAGGCTCGGCAAGGTGTATCCCAACAAGCTGATGCAGATCACCTCGGTGGACAGGTACATCAAGTACCATGTGCAGGAGTTCGAGAGGGCTTTCAGGGAGAGGTTCCCTGCCTGCACATTGGCGGCCAAGAGGCACATTGATTCCACAACCACCATACTGGATGTCCATGGCGTGGGGCTGAAGAATTTCTCAAAGACTGCAAGGGAGCTTGTTCACCGGATGCAGAAGATAGATAGTGATTACTATCCTGAGACATTACATCAGATGTATGTAGTGAATGCTGGCAGTGGCTTCAAGCTGATATGGAACAGTGTGAAAGGGTTTCTTGACCCAAAAACTTCTTCAAAGATTCATGTTCTTGGTACAAACTACCAGAGTAGACTTCTTGAAGTAATTGACAAAAGTGAATTGCCAGAGTTTCTTGGCGGTTCATGTACATGCAGTGAAGGTGGTTGCCTTGGTTCTAACAAAGGGCCGTGGAATGATCATGTCATTTTGAAGCTGATACACAGTATGAGGAGCAATAGTAGTATGAGGGAAATCAAGCAAGTTTCTGATAGCGAAGACAGGAGCGGATCTTCCCTAAGGGCAGAAAAATTGAAGGGGATGATGAGTGATATATCAAATGCTGAATCAGAGTCAGATGTTGATGAGTTCAGTTTATCAGCTGTCCTGAGGAGTACTGACTACAGTTTCCTTACTCCAGTTAGCGAAGAAGTTAAGGGATCAGATTCTTCAACTTTCTGTAGTTGTGAGTCTTGTGACAGGAAGGGTCTCCCAGATGTAACTCCTGAATCTTCTCAGTCTGTACAACAATCTTCTGAAATGGTGCCAAACCAACTGGTCTCTCATGAACATTCATCCACAACCAGATGGATGAATAATTTAGGGAACATGGCAATTAGTTTTCATGGCACTCTGACTGGAAGGACTTTGAGCAATTTCGTTAGAGTAGTAGGCACACTCATGATCAAGATACTAGCCGTTTTCAGCCTTTTTGTCAGTAGAAGAGGAAACATGCTAGAGAATGTTCATCCTTCTAATGTAGAAGATGAACCTCAGCCTCGAAGTGCAACGGAAGATAACATGAGTGCTTGTTTACAACGTCTTGAAAAACTTGAATCATTATGCAATCATCTCATGAGCAAACCTCCAGATATGCCAAAGGAGAAAGAGTGTCTACTGCTACAATCGTTTGATCGGATAAAAACCATCGAATCGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10628#0 CAACCCCTCCAGTTGCCCACCAGAAGGAGCAAACAGAGAGAGGCAGAAGGCAAGCTGCAG 60
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 TGTTGGGGGAGAAGAAAGGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGAGG 120
consensus_10628#1 --------------------------------------CAGTTATTTAGTTGATCACCGG 22
** ** ** * **
consensus_10628#0 CAGTGGCAGAGGCAGAGGAAGGGAAAGAAAGCTCCAATCTCGCCT-CTGCTCCTGTCTCC 179
consensus_10628#1 CCACTCTTCTTCCTGATCTGCAGAGCTGCAGTCTCAGTCTGTCCTGCCGTCCATACAGCA 82
* * ** ** ** ** *** *** * * * * *
consensus_10628#0 AGGAAATCTTGATGCTTGCACATAAATAGGTG-ATTCCAAGATTGGAC--ATTTGGTACG 236
consensus_10628#1 ACAGCAACGCAGGACTACAGGAGAGGTCGTAGCACTCTCGGTTTGTGCCGATTGGATCCA 142
* * * ** * * * * * * ** * *** * *** * * *
consensus_10628#0 CGAGCTCTGAGCTATCCAAG---AACTTGGTGGTGAAG--ATGTCAGTGATCCATGCGGA 291
consensus_10628#1 GAAAATTCAAG--ATCCAAATTTAATCCGGAAGCGAGACAATGTCAGTGAGCCATGGCGA 200
* * ** ****** ** ** * ** ********** ***** **
consensus_10628#0 GGACATCGAGATATCGCTGTGCGACGGCAACTCGGAGGACGAGCGGCGGCGGCGGAGGAT 351
consensus_10628#1 GGAGCTCGAGATATCGCCGTGCGACCCGAACTCCGAGGATGACCGGCGGCGGCGCGGGAT 260
*** ************ ******* ***** ***** ** *********** ****
consensus_10628#0 CGGGTCCAACCTTCGCCGGAAGGCCATCCACGCGATCAAGAAGCGCGGCCGGCGGCG--- 408
consensus_10628#1 GGGGTCGTCGCTGCGGCGGAAGGCCATCCGCGCGCTCCGGAAGCGCGGCGGGCGGCGGCG 320
***** ** ** ************* **** ** ********** *******
consensus_10628#0 ---------CGTCGACTGCCGCTTCCCGCCGGCCATCTCCATCGAGGACGTCCGCGACGC 459
consensus_10628#1 GCGCCGCCGCGTCGACTTCCGGTACCCGGCCGCCATGTCCATCGAGGACGTCCGCGACGC 380
******** *** * **** * ***** ***********************
consensus_10628#0 CGAGGAGGAGCGCGCTGTCGCCGCCTTCCACGACCGCCTCGCCGCCCACGGCCTCCTCCC 519
consensus_10628#1 CGAGGAGGAGCTCGCCGTCGCCGCGTTCCGCGACCGCCTCGCCGTGCACGCCCTCCTCCC 440
*********** *** ******** **** ************** **** *********
consensus_10628#0 CGACAAGCATGACGACTACCACATGATGCTGAGGTTCTTGAAGGCCAGGAAGTTTGATAT 579
consensus_10628#1 CGACAAGCACGACGACTACCACATGATGCTCAGGTTTCTGAAGGCAAGAAAGTTTGATTC 500
********* ******************** ***** ******* ** *********
consensus_10628#0 CGACAGGGCAATGCAGATGTGGGCAGACATGCTGAAATGGAGGGAAGAGTTCGGAGCTGA 639
consensus_10628#1 GGAGAAGGCGATGCAAATGTGGGCGGAGATGCTGCGATGGAGGAAGGAGTTCGGAGCCGA 560
** * *** ***** ******** ** ****** ******* * *********** **
consensus_10628#0 CACAATCCTTCAGGATTTTGATTTTCATGAACTGGATGAAGTGCTGCGCTACTACCCTCA 699
consensus_10628#1 CACGATCTTGGAGGAGTTCGAGTTCGATGAGCTCGACGACGTGCTCCGGTACTACCCTCA 620
*** *** * **** ** ** ** **** ** ** ** ***** ** ***********
consensus_10628#0 GGGCTACCACGGTGTCGACCGGGAGGGCCGCCCAGTGTACATCGAGAGGCTCGGCAAGGT 759
consensus_10628#1 GGGCTACCATGGCGTCGATCGGGAAGGCCGGCCGGTGTACATCGAGAGGCTCGGCAAGGT 680
********* ** ***** ***** ***** ** **************************
consensus_10628#0 CGACCCGAACAAGCTCATGCAGATCACCTCGGTGGACCGCTACATCAAGTACCATGTTCA 819
consensus_10628#1 GTATCCCAACAAGCTGATGCAGATCACCTCGGTGGACAGGTACATCAAGTACCATGTGCA 740
* ** ******** ********************* * ***************** **
consensus_10628#0 GGAGTTTGAGAGGGCCTTCAGGGAGAGGTTTCCTGCCTGCACATTGGCGGCAAAGAGGCA 879
consensus_10628#1 GGAGTTCGAGAGGGCTTTCAGGGAGAGGTTCCCTGCCTGCACATTGGCGGCCAAGAGGCA 800
****** ******** ************** ******************** ********
consensus_10628#0 CATTGATTCCACCACCACCATCTTGGATGTTCAGGGAGTGGGATTTAAGAATTTCTCAAA 939
consensus_10628#1 CATTGATTCCACAACCACCATACTGGATGTCCATGGCGTGGGGCTGAAGAATTTCTCAAA 860
************ ******** ******* ** ** ***** * **************
consensus_10628#0 GACTGCGAGGGAGCTTATCAACCGAATGCAGAAGATAGACAGTGACTATTACCCTGAGAC 999
consensus_10628#1 GACTGCAAGGGAGCTTGTTCACCGGATGCAGAAGATAGATAGTGATTACTATCCTGAGAC 920
****** ********* * **** ************** ***** ** ** ********
consensus_10628#0 ATTACATCAAATGTTTGTCGTGAACGCCGGCAGCGGGTTCAAGTTGATCTGGAATAGCGT 1059
consensus_10628#1 ATTACATCAGATGTATGTAGTGAATGCTGGCAGTGGCTTCAAGCTGATATGGAACAGTGT 980
********* **** *** ***** ** ***** ** ****** **** ***** ** **
consensus_10628#0 GAAGGGCTTTCTGGACCCAAAAACTTCATCCAAGATTCATGTTCTTGGTTCGAATTACCA 1119
consensus_10628#1 GAAAGGGTTTCTTGACCCAAAAACTTCTTCAAAGATTCATGTTCTTGGTACAAACTACCA 1040
*** ** ***** ************** ** ****************** * ** *****
consensus_10628#0 GAGTAGACTTCTTGAAGTAATTGATTCCAGTGAGTTACCGGACTTCCTCGGTGGGTCATG 1179
consensus_10628#1 GAGTAGACTTCTTGAAGTAATTGACAAAAGTGAATTGCCAGAGTTTCTTGGCGGTTCATG 1100
************************ ***** ** ** ** ** ** ** ** *****
consensus_10628#0 CTCATGCAGTGACAAGGGTGGTTGTCTTGGGTCGAATAAAGGCCCATGGAATGATCCTTT 1239
consensus_10628#1 TACATGCAGTGA---AGGTGGTTGCCTTGGTTCTAACAAAGGGCCGTGGAATGATCATGT 1157
********** ******** ***** ** ** ***** ** ********** * *
consensus_10628#0 CATTTTGAAGCTGATACACAATTTGGAGGC---TGGTTGCGTCAGAGAGATCAAGCCAGT 1296
consensus_10628#1 CATTTTGAAGCTGATACACAGTATGAGGAGCAATAGTAGTATGAGGGAAATCAAGCAAGT 1217
******************** * ** * * ** * * ** ** ******* ***
consensus_10628#0 GTCTGACGGTGAAGAAAGAAGCAGCTCATCCCTTCGGTTGGAGCAGCCGAAGTGGCAGGG 1356
consensus_10628#1 TTCTGATAGCGAAGACAGGAGCGGATCTTCCCTAAGGGCAGAA------AAATTGAAGGG 1271
***** * ***** ** *** * ** ***** ** ** ** * * ****
consensus_10628#0 CATGATTAGCGACATATCAAATGCTGAGTCAGGGTCAGACGTTGATGATTTTGGTTCTTT 1416
consensus_10628#1 GATGATGAGTGATATATCAAATGCTGAATCAGAGTCAGATGTTGATGAGTTCAGTTTATC 1331
***** ** ** ************** **** ****** ******** ** *** *
consensus_10628#0 ---CTTTCAGAAAGGTGTTGACTATGGTTACCTCACTCCAGTCCATGAGGAAGTAAGGGG 1473
consensus_10628#1 AGCTGTCCTGAGGAGTACTGACTACAGTTTCCTTACTCCAGTTAGCGAAGAAGTTAAGGG 1391
* * ** ** ****** *** *** ******** ** ***** * ***
consensus_10628#0 AACAGATTCTTTGACTTACTATAGCTGTGA------TGACCAGAC---TCGTCGAGATAT 1524
consensus_10628#1 ATCAGATTCTTCAACTTTCTGTAGTTGTGAGTCTTGTGACAGGAAGGGTCTCCCAGATGT 1451
* ********* **** ** *** ***** **** ** ** * **** *
consensus_10628#0 AGCTCCTGAATCTTGTAAGGGAGTGCAAG---CTACTGGAATGGTGCAGAATCAGCTACC 1581
consensus_10628#1 AACTCCTGAATCTTCTCAGTCTGTACAACAATCTTCTGAAATGGTGCCAAACCAACTGGT 1511
* ************ * ** ** *** ** *** ******** ** ** **
consensus_10628#0 TGATAACAGGCAACCCTCCACAAATCGGAACCCACATGACTCAGGAAACA--ATGGTCA- 1638
consensus_10628#1 CTCTCATGAACATTCATCCACAACCAGATGGATGAATAATTTAGGGAACATGGCAATTAG 1571
* * ** * ******* * ** * * *** **** * *
consensus_10628#0 CTTGGATGGTGCATTTGCTCGAAGGAGTTTGCAAAATTATATTCAAGTTGTTGTCACAAC 1698
consensus_10628#1 TTTTCATGGCACTCTGACTGGAAGGACTTTGAGCAATTTCGTTAGAGTAGTAGGCACACT 1631
** **** * * ** ****** **** **** ** *** ** * ****
consensus_10628#0 CTTTATCAAGCTACTCTCCTTCCTCCGTCTCTTCATCTCCAGACCAGTGAGGAGGCTCGA 1758
consensus_10628#1 CATGATCAAGATACTAGCCGTTTTCAGCCTTTTTGTCAGTAGAAGAGGAAACATGCTAGA 1691
* * ****** **** ** * ** * ** ** ** *** ** * * *** **
consensus_10628#0 GAATGTCCATTCTTGTACCGTACCTGTCCCATCTGAAGAAAAGCCAGAGCCTCGATCTAT 1818
consensus_10628#1 GAATGTTCATCCTTCTAATGTA------------GAAGATGAACCTCAGCCTCGAAGTGC 1739
****** *** *** ** *** ***** * ** ******** *
consensus_10628#0 ACGTGATGATGATATGACCATGTGCTTACAACGTCTTGACAGTCTCGAATCTTTGTGTAA 1878
consensus_10628#1 AACGGAAGATAACATGAGTGCTTGTTTACAACGTCTTGAAAAACTTGAATCATTATGCAA 1799
* ** *** * **** ** ************** * ** ***** ** ** **
consensus_10628#0 CCATCTAGCCAGCAGGCCACCAGAGATACCCAGAGAGAAAGAGCATATGCTACTGAACTC 1938
consensus_10628#1 TCATCTCATGAGCAAACCTCCAGATATGCCAAAGGAGAAAGAGTGTCTACTGCTACAATC 1859
***** **** ** ***** ** ** * ********* * * ** ** * **
consensus_10628#0 TTTTGAGCGGATCAAATGCATTGAGGCTGACCTGGAGAGGACCAAAAGAGTGCTGCACGC 1998
consensus_10628#1 GTTTGATCGGATAAAAACCATCGAATCGGA------------------------------ 1889
***** ***** *** *** ** * **
consensus_10628#0 AACGGTGGTGAAGCAGAAAGCGCTTGTGGAGACTCTGGAAGCTGTACAGGAGTCATCAAG 2058
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 AGCTAGGAAGAGATTGTTTTGTTCATAGAATATACCGCACCAAGTCAAGAACCATGTCGA 2118
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 CATTTAACCGCGACGCATGAAGCTCTGCCAGTGCCATTTTTGACCTTCCCCAACTTCATC 2178
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 CCGGGCCAGGGAAAAAACCTGAAAGAGAAGAGAAGATAGCATTTGGTGATATAGCCTGCT 2238
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 AAGCTGCTTCCTTTCAGCATCTCACCATCTTTTTTTTTTGTAGTTGTCTGTACTAGTAAA 2298
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 GCCCTTCTCTTGTGCCTGGTGAATGTTGTGCCGTGCTTAGTGCAGCTATGTTTTTTCTTT 2358
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 TTTGGCCAGCAAGTGATCTCGTCACGGTCTTTTGCATTCAGGGGGCAAGAAGAAAAGATG 2418
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 GCCGAACTGCATGTTGATGAGTCTGAAAGTTTTTTTACAGCTGACCTCCATTTAGTTGAC 2478
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 AAAAGGGCACAATTGGTGATAGCTTACTGGTGAAAATGTCCCATGTAAATGCTGCTTTTA 2538
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 GTACTAGTTTATTACAGTGCTACCTCCTATGAATGATTATCGGATAATACAGTTCTAGTT 2598
consensus_10628#1 ------------------------------------------------------------
consensus_10628#0 AGATTATAATCACAATGGGATAGTAGTACAATTGTGTGCTT 2639
consensus_10628#1 -----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||