These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10630#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1587 fasta sequence [GTCCACCTGACCACCTCCCCACTTCCCTTTCCCCGATTCTTCTCACTACTGCCGACCAGTGTGGGCTACTACACTGAACTGAACACCAACCGAAGCAGCGACCTCAACAACCATCGAGCAAACTAGCAATGGCCTCCCCAATCCACTCGCCGCCGCCGGAGCCGGCCACCGATGGCGATGATGCCCAATCCCACCCTCCCCCTCCCACCCCGCACCCGGCAACCGATCCCCCTCCCATCTCACCCCAAAATCCAACCCCTCCTCCTCCTCCCCTTCCTGCCTCCGCCGCCGCCCCTACTACTCCGTCACCAAATCACTCCGGCGATCCCTCTCGCCCCATTCCTTCGCAGGCCCCGGCACCGCCCCCTCCTCCCACCGCCGATCCGTCTCCTCCCCTCCCCCACGACAACCGAACTCCACAGCCGCGGGCGGCGCCCCCTCCCGCTCCCGCTCCCGATCAACCAGCACCGCCTTCTCCACCACCATCACTGCCGCCTTCTCCCCCAGCACCGGGGTCCCCGGAATCCATGCTGGAGCGGGAGGCGTCGGAAGCGGATGGAGAACCGGAGAACATGACGCTTGCCCTTGCGCTGGCGGAGACGGAGACGGAGAAGGCGATGCCGCCGACGCCGCCGAAGGCCGCGGAAGCGGCGGAGTCCCCAACCGGATCGCCGCAGAAGGAGTCTGCCCTGACCATTGCCAAGCTCCTCTCCGGCGAGGACCACGCGGGGACGGAGACGAAGCCGGTGCCCGAGAAGGCCGCACCAGCAGCAACCACCACCACCGCCGCCGTCGCATCAGTCGGCGGCGGCGGCGGTGGTGGAGGAGGAGGCGTGGGGTCTAAGAGATGGCTTCTTGGCGGCGTCCCAGAGAAGGTGCGGCGGTCGGAGCTCAGGAGGGCCGAGCTAGGGTTCAGGGTTTTGGCCGCCGTCTTCTGCTTGGTCTCGCTCTCCGTCATGGCCGCCGATACCACGCCGGGCTGGTCCGGTGACTCCTTCCGCCGCTACAACGAGTACAGGTATACACTTTCTGCGAGTGTGTTGGCTTTTACTTACTCGGGGTTCCAGTTGGTCGTGGAAGTGCACTACTTTGTCACGGGGAGACGTATAATTCGAGACCCATCAGGGAAGTACTTCAATCTCGCAATGGATCAGATATTGGCTTACCTCCTGTTGTCAGCATCTTCAGCAGCACTTTCTCGCAATGATGTTTGGGTGTCTCGGTTTGGAGTGGATCAATTTGCCAAACTTATCAATGCTTCAGCCTCCATGGCATTCTTAGCTTTCGTTGCTCTTGGTTTTAGCTCCATAATCTCAGCGTATCATGTCTTCAGCTCGGTTTTTTAAACCCATTGTACATTACTTGTTGTAAGTA-C-TATGTGCTAGTCTG-CTAGATGTATC-TTGGTCAAGCCAACCTTGATTGTTGCTTCTTGTTTGTAGAATTGTGGCAACGATATTGGACTCCGAAATGGGAATACACGGTGATCTTTTTAAGA-GCGTGTAATGGCAGTTGGGCCTTGGGGACCAATCGGTTCTGTAATAAAAATTCTGTAGAGCAAATCATTCAAGGATGCGACTTTTACTGGTA] [+] EMBL AK105412 [GTCCACCTGACCACCTCCCCACTTCCCTTTCCCCGATTCTTCTCACTACTGCCGACCAGTGTGGGCTACTACACTGAACTGAACACCAACCGAAGCAGCGACCTCAACAACCATCGAGCAAACTAGCAATGGCCTCCCCAATCCACTCGCCGCCGCCGGAGCCGGCCACCGATGGCGATGATGCCCAATCCCACCCTCCCCCTCCCACCCCGCACCCGGCAACCGATCCCCCTCCCATCTCACCCCAAAATCCAACCCCTCCTCCTCCTCCCCTTCCTGCCTCCGCCGCCGCCCCTACTACTCCGTCACCAAATCACTCCGGCGATCCCTCTCGCCCCATTCCTTCGCAGGCCCCGGCACCGCCCCCTCCTCCCACCGCCGATCCGTCTCCTCCCCTCCCCCACGACAACCGAACTCCACAGCCGCGGGCGGCGCCCCCTCCCGCTCCCGCTCCCGATCAACCAGCACCGCCTTCTCCACCACCATCACTGCCGCCTTCTCCCCCAGCACCGGGGTCCCCGGAATCCATGCTGGAGCGGGAGGCGTCGGAAGCGGATGGAGAACCGGAGAACATGACGCTTGCCCTTGCGCTGGCGGAGACGGAGACGGAGAAGGCGATGCCGCCGACGCCGCCGAAGGCCGCGGAAGCGGCGGAGTCCCCAACCGGATCGCCGCAGAAGGAGTCTGCCCTGACCATTGCCAAGCTCCTCTCCGGCGAGGACCACGCGGGGACGGAGACGAAGCCGGTGCCCGAGAAGGCCGCACCAGCAGCAACCACCACCACCGCCGCCGTCGCATCAGTCGGCGGCGGCGGCGGTGGTGGAGGAGGAGGCGTGGGGTCTAAGAGATGGCTTCTTGGCGGCGTCCCAGAGAAGGTGCGGCGGTCGGAGCTCAGGAGGGCCGAGCTAGGGTTCAGGGTTTTGGCCGCCGTCTTCTGCTTGGTCTCGCTCTCCGTCATGGCCGCCGATACCACGCCGGGCTGGTCCGGTGACTCCTTCCGCCGCTACAACGAGTACAGGTATACACTTTCTGCGAGTGTGTTGGCTTTTACTTACTCGGGGTTCCAGTTGGTCGTGGAAGTGCACTACTTTGTCACGGGGAGACGTATAATTCGAGACCCATCAGGGAAGTACTTCAATCTCGCAATGGATCAGATATTGGCTTACCTCCTGTTGTCAGCATCTTCAGCAGCACTTTCTCGCAATGATGTTTGGGTGTCTCGGTTTGGAGTGGATCAATTTGCCAAACTTATCAATGCTTCAGCCTCCATGGCATTCTTAGCTTTCGTTGCTCTTGGTTTTAGCTCCATAATCTCAGCGTATCATGTCTTCAGCTCGGTTTTTTAAACCCATTGTACATTACTTGTTGTAAGTA C TATGTGCTAGTCTG CTAGATGTATC TTGGTCAAGCCAACCTTGATTGTTGCTTCTTGTTTGTAGAATTGTGGCAACGATATTGGACTCCGAAATGGGAATACACGGTGATCTTTTTAAGA GCGTGTAATGGCAGTTGGGCCTTGGGGACCAATCGGTTCTGTAATAAAAATTCTGTAGAGCAAATCATTCAAGGATGCGACTTTTACTGGTA] [+] EMBL AK101958 [ CCAGTGTGGGCTACTACACTGAACTGAACACCAACCGAAGCAGCGACCTCAACAACCATCGAGCAAACTAGCAATGGCCTCCCCAATCCACTCGCCGCCGCCGGAGCCGGCCACCGATGGCGATGATGCCCAATCCCACCCTCCCCCTCCCACCCCGCACCCGGCAACCGATCCCCCTCCCATCTCACCCCAAAATCCAACCCCTCCTCCTCCTCCCCTTCCTGCCTCCGCCGCCGCCCCTACTACTCCGTCACCAAATCACTCCGGCGATCCCTCTCGCCCCATTCCTTCGCAGGCCCCGGCACCGCCCCCTCCTCCCACCGCCGATCCGTCTCCTCCCCTCCCCCACGACAACCGAACTCCACAGCCGCGGGCGGCGCCCCCTCCCGCTCCCGCTCCCGATCAACCAGCACCGCCTTCTCCACCACCATCACTGCCGCCTTCTCCCCCAGCACCGGGGTCCCCGGAATCCATGCTGGAGCGGGAGGCGTCGGAAGCGGATGGAGAACCGGAGAACATGACGCTTGCCCTTGCGCTGGCGGAGACGGAGACGGAGAAGGCGATGCCGCCGACGCCGCCGAAGGCCGCGGAAGCGGCGGAGTCCCCAACCGGATCGCCGCAGAAGGAGTCTGCCCTGACCATTGCCAAGCTCCTCTCCGGCGAGGACCACGCGGGGACGGAGACGAAGCCGGTGCCCGAGAAGGCCGCACCAGCAGCAACCACCACCACCGCCGCCGTCGCATCAGTCGGCGGCGGCGGCGGTGGTGGAGGAGGAGGCGTGGGGTCTAAGAGATGGCTTCTTGGCGGCGTCCCAGAGAAGGTGCGGCGGTCGGAGCTCAGGAGGGCCGAGCTAGGGTTCAGGGTTTTGGCCGCCGTCTTCTGCTTGGTCTCGCTCTCCGTCATGGCCGCCGATACCACGCCGGGCTGGTCCGGTGACTCCTTCCGCCGCTACAACGAGTACAGGTATACACTTTCTGCGAGTGTGTTGGCTTTTACTTACTCGGGGTTCCAGTTGGTCGTGGAGGTGCACTACTTTGTCACGGGGAGACGTATAATTCGAGACCCATCAGGGAAGTACTTCAATCTCGCAATGGATCAGATATTGGCTTACCTCCTGTTGTCAGCATCTTCAGCAGCACTTTCTCGCAATGATGTTTGGGTGTCTCGGTTTGGAGTGGATCAATTTGCCAAACTTATCAATGCTTCAGCCTCCATGGCATTCTTAGCTTTCGTTGCTCTTGGTTTTAGCTCCATAATCTCAGCGTATCATGTCTTCAGCTCGGTTTTTTAAACCCATTGTACATTACTTGTTGTAAGTA C TATGTGCTAGTCTG CTAGATGTATC T ] [+] EMBL CB668223 [ ACTCCCCGCCGCCGGAGCCGGCCACCGATGGCGATGATGCCCAATCCCACCCTCCCCCTCCCACCCCGCACCCGGCAACCGATCCCCCTCCCATCTCACCCCAAAATCCAACCCCTCCTCCTCCTCCCCTTCCTGCCTCCGCCGCCGCCCCTACTACTCCGTCACCAAATCACTCCGGCGATCCCTCTCGCCCCATTCCTTCGCAGGCCCCGGCACCGCCCCCTCCTCCCACCGCCGATCCGTCTCCTCCCCTCCCCCACGACAACCGAACTCCACAGCCGCGGGCGGCGCCCCCTCCCGCTCCCGCTCCCGATCAACCAGCACCGCCTTCTCCACCACCATCACTGCCGCCTTCTCCCCCAGCACCGGGGTCCCCGGAATCCATGCTGGAGCGGGAGGCGTCGGAAGCGGATGGAGAACCGGAGAACATGACGCTTGCCCTTGCGCTGGCGGAGACGGATACGGAGAAGGCGATGCCGCCGACGCCGCCGAACGCCGCGGAAGCGGCGGAGTCCCCAACCGGATCGCCGCAGAAGGAGTCTGCCCTGACCATTGCCAAGCTCCTCTCCGGCGAGGACCACGCGGGGACGGACACGAAGCCGGTGCCCGACAAGGCCGCACCAGCAGCAACCACCACCACCGCCGCCGTCGCATCAGTCAGCGGCGGCGGCGGTGGTGGAAGACGAc ] [-] EMBL CB668224 [ CGGTGGTGGAGGAGGAGGCGTGGGGTCTAAGAGATGGCTTCTTGGCGGCGTCCCAGAGAAGGTGCGGCGGTCGGAGCTCAGGAGGGCCGAGCTAGGGTTCAGGGTTTTGGCCGCCGTCTTCTGCTTGGTCTCGCTCTCCGTCATGGCCGCCGATACCACGCCGGGCTGGTCCGGTGACTCCTTCCGCCGCTACAACGAGTACAGGTATACACTTTCTGCGAGTGTGTTGGCTTTTACTTACTCGGGGTTCCAGTTGGTCGTGGAAGTGCACTACTTTGTCACGGGGAGACGTATAATTCGAGACCCATCAGGGAAGTACTTCAATCTCGCAATGGATCAGATATTGGCTTACCTCCTGTTGTCAGCATCTTCAGCAGCACTTTCTCGCAATGATGTTTGGGTGTCTCGGTTTGGAGTGGATCAATTTGCCAAACTTATCAATGCTTCAGCCTCCATGGCATTCTTAGCTTTCGTTGCTCTTGGTTTTAGCTCCATAATCTCAGCGTATCATGTCTTCAGCTCGGTTTTTTAAACCCATTGTACATTACTTGTTGTAAGTA C TATGTGCTAGTCTG CTAGATGTATC TTGGTCAAGCCAACCTTGATTGTTGCTTCTTGTTTGTAGAATTGTGGCAACGATATTGGACTCCGAAATGGGAATACACGGTGATCTTTTTAAGAGGCGTGTAATGGCAGTTGGGCCTTGGGGACCAATCGGTTCTGTAATAAAAATTCTGTAGAGCAAATCATGCAAGGATGCGACT ] [-] EMBL CB965139 [ CGAGTACAGGTATACACTTTCTGCGAGTGTGTTGGCTTTTACTTACTCGGGGTTCCAGTTGGTCGTGGAAGTGCACTACTTTGTCACGGGGAGACGTATAATTCGAGACCCATCAGGGAAGTACTTCAATCTCGCAATGGATCAGATATTGGCTTACCTCCTGTTGTCAGCATCTTCAGCAGCACTTTCTCGCAATGATGTTTGGGTGTCTCGGTTTGGAGTGGATCAATTTGCCAAACTTATCAATGCTTCAGTCTCCATGGCATTCTTAGCTTTCGTTGCTCTTGGTTTTAGCTCCATAATCTCAGCGTATCATGTCTTCAGCTCGGTTTTTTAAACCCATTGTACATTACTTGTTGTAAGTA C TATGTGCTAGTCTG CTAGATGTATC TTGGTCAAGCCAACCTTGATTGTTGCTTCTTGTTTGTAGAATTGTGGCAACGATATTGGACTCCGAAATGGGAATACATGGTGATCTTTTTA ] [-] EMBL CB655162 [ CTTTTTGCGAGTGTGTTGGCTTTTACTTACTCGGGGTTCCAGTTGGTCGTGGAAGTGCACTACTTTGTCACGGGGAGACGTATAATTCGAGCCCCATCAGGGAAGTACTTCAATCTCGCAATGGATCAGATATTGGCTTACCTCCTGTTGTCAGCATCTTCAGCAGCACTTTTTCGCAATGATGTTTGGGTGTCTCGGTTTGGAGTGGATCAATTTGCCAAACTTATCAATGCTTCAACCTCCATGGCATTTTTAGCTTTCGTTGCTCTTGGTTTTAGCTCCATAATTTCAGGGTATCATGTCTTCAGCTCGGTTTTTTAAACCCATTGTACATTACTTGTGGTAAGTA C TATGTGCTAGTCTG CTAGATGTATT TTGGTCAAGCCACCCTTGATTGTTGCTTCTTGTTTGTAGAATTGTGGCAACGATATTGGACTCCGAAATGGGAATACCCGGGGATCTTTTTAAGA GCGTGTAATGGCAGTTGGCCCTTGGGGACCAATCGGTTCTTTAATAAAATTTt ] [-] EMBL CB967256 [ tgTGTACATTACTTGTTGTAAGTATCNTATGTGCTAGTCTGTCTAGATGTATCNTTGGTCAAGCCAACCTTGATTGTTGCTTCTTGTTTGTAGAATTGTGGCAACGATATTGGACTCCGAAATGGGAATACATGGTGATCTTTTTA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||