These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10645#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2615 fasta sequence [TGTCGTCAGAGTATCGGTAACCAACCGAAAATGTTTCGTTGATGTCCGGATGAGCTCAAAATATCGGACGCTTGTTCTTATCCAAATCTCTCAGCCACCTCCTCCACCACACATTCCCTTTCATGCCTTCTTCTCTCTCCTCAAAGTCTCTCTCTTCTCAACGCCTCTACACAGTGGAGTTGCAAGCCATGGCGAGGCATCGTTGTCGGCAGTCACACGGCGGCGTCGACATCGGAGCAAGGTGGCGCGCGATAGGGAGGAGGTGCTTGACCTCGCCGGCGGCCACATGGCGGCGCGTGGTTGGGAGGAGGCAATGGACCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGG-TAGGGAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTGAGGAGGAGGTGCTGGACCTTGCTGGCGGCCACACGACGGCGGGGTGTAGACAACGCAAGATT-GGGGAGGAGGCACTGGACCTTGCTGGCGGCTACACAGCAGCGGCGGCGACGTGGCAGAGGTGCTAGATTTGGCTGTCGGTGAGGACTCAACCGGTCTTGGGCGAGGTTAT-CCACATCGTGCCGCTATTCTTCTCCCGCAAACATCAGTTACTTGGTTCTAGCAGCTAGGGGTAGAAGAAGATGACGAAGGTGGGTTTATTTCATTGGAGTTTTAGTGATGTTGCAACATATTATTTTATTTGGTTGCACTTTATTGTATTAAGGTGTTTTATTTTGTTTTGATTCAGTGTTGCATTTTACTGATTCTTAGTGTTGCAACCAGACTATTTCAGATGTTGCATTTGATTGAAACAATTTTGTTCAAGCAATGAAATATTTTTCCTCGATCGATGAAACATCTGAAACATTTTTCATCGAGTGGTGCAACATGTGAAACACTCTGTGATAGGCAACACCGTCCGATCTTTTGCAATAGATCGGACGTCCGATTTGTAGTAGCATCCCTAACCATCATGTATCTTTCAGATTTCATACATTTTGATTAATATATTTTTTGCTTCCATATTTACTTTCTCTCCGTGTACTTTCCACACCTTCTTTCCTGTAATTACTCTATTGTGGAGAGTTCTCCTGATCCAATCAACCGATTAGTTGATCAGCGGGTTTCATAGATTATAAACATTATTATTTTGTTTCTGCGTTTCTTGTTTTAGAATTAATTCACCTAGCTTTGTCTGGGATTTCTGACTGATTAGAGGAGTATTTTGGTATAAGTTGTAGTATATTCCCTAGAAATGTTAGCTAGAGAGAGGAACTAACATAGTCACTAGATTGGTGATAACCCGTTTGTCCTTTACGCGCACATTAATTCTAGTGCATTGGTGTTAAAAATCAGGGTAGCCGCTCACCCACAATGGAAACGTTTCCATGTGCCGAAAGTAAGCAATCTTTTAAAGTGGTTCTGGTCGTGCCAAAATACCTTTTGACTCCGATAGTCTTCTCCAGATCTCTTCAATTAGATAGATGCTTTTACCTAGTGCCATTCGTGTTGTGAATTGTCTATTATTACCTGACTTAATAAGGTAGGAGGAATGAATGTTTTAGGCCATTCGTGCATCCTTTGGGATATCAATATATATGATACCACGGAATACTCCTTGAAGTACTACATCGGTAATTTCACGTGCTTAGGAAACTTTTTTGTAGGAGCATTAGAAATACCAATACCTACAAAGTTGTTTATATTAAAGGGTTAATTGATATTCATATATCAGTTACTATTACTAAAAAAGAACTTACTAATGTACAATATATGTAAATAAGTTACTCCCAATTTGATGCAAGACCTAGATTCATCAAACATATCACCATCCCTACTAAATGCATTATGTAACATACACATGTCGTTTACTTTGACGAGTTTTTTTTTCCACATACCTATTAATTTTCACAGACCTCGCCGACGGGGCCGCTGCCCCCTCCCCCACCGCAGCTGGCGCCGCGTCTCCCCCTCCTGGTCACGCCGTCGCCGACAGAGAGGGGAGGGGAGGGGGAGGAGGAGGAGGAAGGGTAGGGGAGGACGCATCTGGAGGGAGAGGAGGAGACGCAAATGACTTAAAAAGGCGTGGAGATATCGAGGAGATAAGGGCGGGGAGGCGCACACGTGCGACCCGGCGTGTTTTTTCGGATTTGTAGTCCCAGTTGGTGCTACCAATCGGGACTAAAGTGATGATATTTAATTCCGGTTTATAATACCAATCGGGACTAAAGATCCTTGGGGCCTGACACGGCCTATCAACTTTTTGAAGCGGGACAAAAAAAATGATCTTACCAACCAGGACTAAATGATTGTATTTACGGTTAATGATGGTCGTGGTGGTGCGTATGTGATAGAAAAAAAATCGAAGTACATGGAGCAGAGCCAACTAAGATTTTATTCGCAAGGGGATGGATATAAGAAGGAAACACCAGCTTTGCTGAGTGGGACATCATTTATCTTCCCAGAGACCAAGGGAGGCGAGGAATTCACGATCTTGGGATTAAGGTTATTGCTTTGCTTAGCAAGTGGTTACTTACCAGTTACCACCGATGAAATGTGGCAATAGTTGCTACGCAATAAATATTTGGGA] [+] EMBL AK065349 [TGTCGTCAGAGTATCGGTAACCAACCGAAAATGTTTCGTTGATGTCCGGATGAGCTCAAAATATCGGACGCTTGTTCTTATCCAAATCTCTCAGCCACCTCCTCCACCACACATTCCCTTTCATGCCTTCTTCTCTCTCCTCAAAGTCTCTCTCTTCTCAACGCCTCTACACAGTGGAGTTGCAAGCCATGGCGAGGCATCGTTGTCGGCAGTCACACGGCGGCGTCGACATCGGAGCAAGGTGGCGCGCGATAGGGAGGAGGTGCTTGACCTCGCCGGCGGCCACATGGCGGCGCGTGGTTGGGAGGAGGCAATGGACCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGG TAGGGAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTGAGGAGGAGGTGCTGGACCTTGCTGGCGGCCACACGACGGCGGGGTGTAGACAACGCAAGATT GGGGAGGAGGCACTGGACCTTGCTGGCGGCTACACAGCAGCGGCGGCGACGTGGCAGAGGTGCTAGATTTGGCTGTCGGTGAGGACTCAACCGGTCTTGGGCGAGGTTAT CCACATCGTGCCGCTATTCTTCTCCCGCAAACATCAGTTACTTGGTTCTAGCAGCTAGGGGTAGAAGAAGATGACGAAGGTGGGTTTATTTCATTGGAGTTTTAGTGATGTTGCAACATATTATTTTATTTGGTTGCACTTTATTGTATTAAGGTGTTTTATTTTGTTTTGATTCAGTGTTGCATTTTACTGATTCTTAGTGTTGCAACCAGACTATTTCAGATGTTGCATTTGATTGAAACAATTTTGTTCAAGCAATGAAATATTTTTCCTCGATCGATGAAACATCTGAAACATTTTTCATCGAGTGGTGCAACATGTGAAACACTCTGTGATAGGCAACACCGTCCGATCTTTTGCAATAGATCGGACGTCCGATTTGTAGTAGCATCCCTAACCATCATGTATCTTTCAGATTTCATACATTTTGATTAATATATTTTTTGCTTCCATATTTACTTTCTCTCCGTGTACTTTCCACACCTTCTTTCCTGTAATTACTCTATTGTGGAGAGTTCTCCTGATCCAATCAACCGATTAGTTGATCAGCGGGTTTCATAGATTATAAACATTATTATTTTGTTTCTGCGTTTCTTGTTTTAGAATTAATTCACCTAGCTTTGTCTGGGATTTCTGACTGATTAGAGGAGTATTTTGGTATAAGTTGTAGTATATTCCCTAGAAATGTTAGCTAGAGAGAGGAACTAACATAGTCACTAGATTGGTGATAACCCGTTTGTCCTTTACGCGCACATTAATTCTAGTGCATTGGTGTTAAAAATCAGGGTAGCCGCTCACCCACAATGGAAACGTTTCCATGTGCCGAAAGTAAGCAATCTTTTAAAGTGGTTCTGGTCGTGCCAAAATACCTTTTGACTCCGATAGTCTTCTCCAGATCTCTTCAATTAGATAGATGCTTTTACCTAGTGCCATTCGTGTTGTGAATTGTCTATTATTACCTGACTTAATAAGGTAGGAGGAATGAATGTTTTAGGCCATTCGTGCATCCTTTGGGATATCAATATATATGATACCACGGAATACTCCTTGAAGTACTACATCGGTAATTTCACGTGCTTAGGAAACTTTTTTGTAGGAGCATTAGAAATACCAATACCTACAAAGTTGTTTATATTAAAGGGTTAATTGATATTCATATATCAGTTACTATTACTAAAAAAGAACTTACTAATGTACAATATATGTAAATAAGTTACTCCCAATTTGATGCAAGACCTAGATTCATCAAACATATCACCATCCCTACTAAATGCATTATGTAACATACACATGTCGTTTACTTTGACGAGTTTTTTTTTCCACATACCTATTAATTTTCACAGACCTCGCCGACGGGGCCGCTGCCCCCTCCCCCACCGCAGCTGGCGCCGCGTCTCCCCCTCCTGGTCACGCCGTCGCCGACAGAGAGGGGAGGGGAGGGGGAGGAGGAGGAGGAAGGGTAGGGGAGGACGCATCTGGAGGGAGAGGAGGAGACGCAAATGACTTAAAAAGGCGTGGAGATATCGAGGAGATAAGGGCGGGGAGGCGCACACGTGCGACCCGGCGTGTTTTTTCGGATTTGTAGTCCCAGTTGGTGCTACCAATCGGGACTAAAGTGATGATATTTAATTCCGGTTTATAATACCAATCGGGACTAAAGATCCTTGGGGCCTGACACGGCCTATCAACTTTTTGAAGCGGGACAAAAAAAATGATCTTACCAACCAGGACTAAATGATTGTATTTACGGTTAATGATGGTCGTGGTGGTGCGTATGTGATAGAAAAAAAATCGAAGTACATGGAGCAGAGCCAACTAAGATTTTATTCGCAAGGGGATGGATATAAGAAGGAAACACCAGCTTTGCTGAGTGGGACATCATTTATCTTCCCAGAGACCAAGGGAGGCGAGGAATTCACGATCTTGGGATTAAGGTTATTGCTTTGCTTAGCAAGTGGTTACTTACCAGTTACCACCGATGAAATGTGGCAATAGTTGCTACGCAATAAATATTTGGGA] [+] EMBL CF334329 [TGTCGTCAGAGTATCGGTAACCAACCGAAAATGTTTCGTTGATGTCCGGATGAGCTCAAAATATCGGACGCTTGTTCTTATCCAAATCTCTCAGCCACCTCCTCCACCACACATTCCCTTTCATGCCTTCTTCTCTCTCCTCAAAGTCTCTCTCTTCTCAACGCCTCTACACAGTGGAGTTGCAAGCCATGGCGAGGCATCGTTGTCGGCAGTCACACGGCGGCGTCGACATCGGAGCAAGGTGGCGCGCGATAGGGAGGAGGTGCTTGACCTCGCCGGCGGCCACATGGCGGCGCGTGGTTGGGAGGAGGCAATGGACCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGGANNGGAAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTGAGGAGGAGGTGCTGGACCTTGCTGGCGGCCACACGACGGCGGGGTGTAGACAACGCAAGATTGGGGGAGGAGGCACTGGACCTTGCTGGCGGCTACACAGCAGCGGCG ] [+] EMBL C74049 [ GACGCTTGTTCTTATCCAAATCTCTCAGCCACCTCCTCCACCACACATTCCCTTTCATGCCTTCTTCTCTCTCCTCAAAGTCTCTCTCTTCTCAACGCCTCTACACAGTGGAGTTGCAAGCCATGGCGAGGCATCGTTGTCGGCAGTCACACGGCGGCGTCGACATCGGAGCAAGGTGGCGCGCGATAGGGAGGAGGTGCTTGACCTCGCCGGCGGCCACATGGCGGCGCGTGGTTGGGAGGAGGCAATGGACCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGG TAGGGAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTTAGGAGGAGGT ] [+] EMBL CB665128 [ CGGCGTCTACATCGGAGCAAGGTGGCGCGCGATAGGGAGGAGGTGCTTGACCTCGCCGGCGGCCACATGGCGGCGCGTGGTTGGGAGGAGGCAATGGACCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGG TAGGGAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTGAGGAGGAGGTGCTGGACCTTGCTGGCGGCCACACGACGGCGGGGTGTAGACAACGCAAGATT GGGGAGGAGGCACTGGACCTTGCTGGCGGCTACACAGCAGCGGCGGCGACGTGGCAGAGGTGCTAGATTTGGCTGTCGGTGAGGACTCAACCGGTCTTGGGCGAGGTTAT CCACATCGTGCCGCTATTCTTCTCCCGCAAACATCAGTTACTTGGTTCTAGCAGCTAGGGGTAGAAGAAGATGACGAAGGTGGGTTTATTTCATTGGAGTTTTAGTGATGTTGCAACATATTATTTTATTTGGTTGCACTTTATTGTATTAAGGTGTTTTATTTTGTTTTGATTCAGTGTTGCATTTTACTGATTCTTAGTGTTGCAACCAGACTATTTCAGATGTTGCATTTGATTGAAACAATTTTGTTCAAGCAATGAAATATTTTTCCTCGATCGATGAAACATCTGAAACATTTTTCATCGAGTGGTGCAACATGTGAAACACTCTGTGATAGGCAACACCGTCCGATCTTTTGCAATAGATCGGACGTCCGATTTGTAGTAGCATCCCTAACCATCATGTATCTTTCAGATTTCATACATTTTGATTAATATATTTTTTGCTTCCATATTTACTTTCTCTCCGTGTACTTTCCAC ] [+] EMBL CB683941 [ GAGGAGGCAATGGATCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGG TAGGGAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTGAGGAGGAGGTGCTGGACCTTGCTGGCGGCCACACGACGGCGGGGTGTAGACAACGCAAGATT GGGGAGGAGGTTCTGGACCTTGC ] [+] EMBL AU029376 [ CAAGATT GGGGAGGAGGCACTGGACCTTGCTGGCGGCTACACAGCAGCGGCGGCGACNTGGCAGAGGTGCTAGATTTGGCTGTCGGTGAGGACTCAACCGGTCTTGGGCGAGGTTATNCCACATCGTGCCGCTATTCTTCTCCCGCAAACATCAGTTACTTGGTTCTAGCAGCTAGGGGTAGAAGAAGATGACGAAGGTGGGTTTATTTCATTGGAGTTTTAGTGATGTTGCAACATATTATTTTATTTGGTTGCACTTTATTGTATTAAGGTGTTTTATTTTGTTTTGATTCAGTGTTGCATTTTACTGATTCTTAGTGTTGCAACCAGACTATTTCAGATGTTGCATTTGATTGAAACAATTTTGTTCAAGCAATGAAATATTTTTCCTCGATCGATGAAACATCTGAAACATTTTTCATCGAGTGGTGCAAaaaaaaaa ] [-] EMBL CB665129 [ GGAATGAATGTTTTAGGCCATTCGTGCATCCTTTGGGATATCAATATATATGATACCACGGAATACTCCTTGAAGTACTACATCGGTAATTTCACGTGCTTAGGAAACTTTTTTGTAGGAGCATTAGAAATACCAATACCTACAAAGTTGTTTATATTAAAGGGTTAATTGATATTCATATATCAGTTACTATTACTAAAAAAGAACTTACTAATGTACAATATATGTAAATAAGTTACTCCCAATTTGATGCAAGACCTAGATTCATCAAACATATCACCATCCCTACTAAATGCATTATGTAACATACACATGTCGTTTACTTTGACGAGTTTTTTTTTCCACATACCTATTAATTTTCACAGACCTCGCCGACGGGGCCGNTGCCCCCTCCCCCACCGCAGCTGGCGCCGCGTCTCCCCCTCCTGGTCACGCCGTCGCCGACAGAGAGGGGAGGGGAGGGGGAGGAGGAGGAGGAAGGGTAGGGGAGGACGCATCTGGAGGGAGAGGAGGAGACGCAAATGACTTAAAAAGGCGTGGAGATATCGAGGAGATAAGGGCGGGGAGGCGCACACGTGCGACCCGGCGTGTTTTTTCGGATTTGTAGTCCCAGTTGGTGCTACCAATCGGGACTAAAGTGATGATATTTAATTCCGGTTTATAATACCAATCGGGACTAAAGATCCTTGGGGCCTGACACGGCCTATCAACTTTTTGAAGCGGGCCAAAAAAAAaaaaaaaga ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||