cluster # 10648

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Oryza sativa
cluster # 10648 cluster # 10648 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10648#0 length = 1262 sequences # 7
consensusID : consensus_10648#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1262
fasta sequence
                              [CAAAATAATTAAGAAAAAGAAGAAATTAATCCTCCCCTCCTCGATCCCGAGCTCGCGCGACAAGTCCGACCACCGCGGCGATGGATTTCTCCGGCGGCGGAGGCGGCGGCGGCGGCGCGACGCTGTCGGAGATGTACCAGAGCGCGCGGCGGCTGCTGCTCTCGGCCCGGGACGGCGTGGCCCGCGTCGAGCGCCTCGCGT-CGGCGCCCACCTCGTCTTCCTACTCCTCGGCGCCGCTCGTCGGGGGCGGCGGCGGTGCCGGGGATTCGGCAGCCGCCGAGGAGGTGCGGCGGGAGGTGGCCCAGATCCAGGGGCTGTGCGCGCAGATGGACCGGCTCTGGCGATCCATCCCCGCCAAGGGCCAGCGTGATCTCTGGAAGAGAAAAGTGGAGCAGTTGTCTGAAGAGGTTGATTCGCTAAAGGAAACCCTTGACAGACATTCTCTGCGGCAAAAAAAGAGGGTTCTAGAAGCAAAAGAAAGGGCAGAGCTATTTGAGAGAGCTAATGGTGAGTCTTCACATGTCCTTCGGATATTTGATGATGAAGCCCAGGCAATGCAATCAGCTCGTAGCTCCTCTCGTATGCTTGATGAAGCATATGAAACAGGAGTAGCTATCCTTCACAAGTATGCTGACCAGAGGGATCGTCTAAAGAGTGCTCAAAGGAAAGCGTTGGATATTCTGAACACCGTTGGTCTATCAAATTCTGTTTTGAAGCTTATTGAGAGGCGGCACCGTGTGGACAAGTGGATTGCATATGCTGGTATGATGATCACAGTGGTGGTGAT-GTTTGTGTTTTGGCGGTGGACGCATTAGTGCTGCAGTGTGTCGGAAACAGCATATTTGTGTTTGGAAGTTGACAGTTGAGACAAGTGGTAGTTCTGAGGATATATCAACAACTGAATGGCAAGAGATTGGATCCCCTTTTTGTTCATGCTCAACTCTGATTGGTAACTAGCGTTACAAGGGCTTTCTCTGGGGGGGCATAAAAGCTGCTTTTCTTTTTCAACGCGGGTTTCCGGCATGCCAGTATATATGCCACTATGTCTATGTGGATCAAATTCTTTTCTGTATGCACATCACAGTAAGTCTATCACTATAATTCTGATTCAAGTGTATCCTATGGTCGGTGCAGATATATATACTGCACATGTACAGAAAAACTGATAGGGTTACTGTCTGCGGATTCTAGTTCATTCTGTACAAACATAGTATGCTTAATGATCTTCCTTTCCTTTTCCTCTTTTATATAACTGGAGTACG]

[+] EMBL AK111247             [CAAAATAATTAAGAAAAAGAAGAAATTAATCCTCCCCTCCTCGATCCCGAGCTCGCGCGACAAGTCCGACCACCGCGGCGATGGATTTCTCCGGCGGCGGAGGCGGCGGCGGCGGCGCGACGCTGTCGGAGATGTACCAGAGCGCGCGGCGGCTGCTGCTCTCGGCCCGGGACGGCGTGGCCCGCGTCGAGCGCCTCGCGT CGGCGCCCACCTCGTCTTCCTACTCCTCGGCGCCGCTCGTCGGGGGCGGCGGCGGTGCCGGGGATTCGGCAGCCGCCGAGGAGGTGCGGCGGGAGGTGGCCCAGATCCAGGGGCTGTGCGCGCAGATGGACCGGCTCTGGCGATCCATCCCCGCCAAGGGCCAGCGTGATCTCTGGAAGAGAAAAGTGGAGCAGTTGTCTGAAGAGGTTGATTCGCTAAAGGAAACCCTTGACAGACATTCTCTGCGGCAAAAAAAGAGGGTTCTAGAAGCAAAAGAAAGGGCAGAGCTATTTGAGAGAGCTAATGGTGAGTCTTCACATGTCCTTCGGATATTTGATGATGAAGCCCAGGCAATGCAATCAGCTCGTAGCTCCTCTCGTATGCTTGATGAAGCATATGAAACAGGAGTAGCTATCCTTCACAAGTATGCTGACCAGAGGGATCGTCTAAAGAGTGCTCAAAGGAAAGCGTTGGATATTCTGAACACCGTTGGTCTATCAAATTCTGTTTTGGAGCTTATTGAGAGGCGGCACCGTGTGGACAAGTGGATTGCATATGCTGGTATGATGATCACAGTGGTGGTGAT GTTTGTGTTTTGGCGGTGGACGCATTAGTGCTGCAGTGTGTCGGAAACAGCATATTTGTGTTTGGAAGTTGACAGTTGAGACAAGTGGTAGTTCTGAGGATATATCAACAACTGAATGGCAAGAGATTGGATCCCCTTTTTGTTCATGCTCAACTCTGATTGGTAACTAGCGTTACAAGGGCTTTCTCTGGGGGGGCATAAAAGCTGCTTTTCTTTTTCAACGCGGGTTTCCGGCATGCCAGTATATATGCCACTATGTCTATGTGGATCAAATTCTTTTCTGTATGCACATCACAGTAAGTCTATCACTATAATTCTGATTCAAGTGTATCCTATGGTCGGTGCAGATATATATACTGCACATGTACAGAAAAACTGATAGGGTTACTGTCTGCGGATTCTAGTTCATTCTGTACAAACATAGTATGCTTAATGATCTTCCTTTCCTTTTCCTCTTTTATATAACTGGAGTACG]
[+] EMBL OSC104601            [                AAGAAGAAATTAATCCTCCCCTCCTCGATCCCGAGCTCGCGCGACAAGTCCGACCACCGCGGCGATGGATTTCTCCGGCGGCGGAGGCGGCGGCGGCGGCGCGACGCTGTCGGAGATGTACCAGAGCGCGCGGCGGCTGCTGCTCTCGGCCCGGGACGGCGTGGCCCGCGTCGAGCGCCTCGCGTACGGCGCCCACCTCGTCTTCCTACTCCTCGGCGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU162302             [                     GAAATTAATCCTCCCCTCCTCGATCCCGAGCTCGCGTGACAAGTCCGACCACCGCGGCGATGGATTTCNCCGGCGGCGGAGGCGGCGGCGGCGGCGCGACNCTGTCGGAGATGTACCAGAGCGCGCGGCGGCTGCTGCTCTCGGCCCGGGACNGCGTGGCCCGCGTCGAGCGCCTCGCGT CGGCGCCCACNTCGTCTTCCTACNCCTCGGCGCCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU184864             [                                  CCCTCCTCGATCCCGAGCTCGCGCGACAAGTCCGACCACCGCGGCGATGGATTTNTCCGGCGGCGGAGGCGGCGGCGGCGGCGCGACGCTGTCGGAGATGTACCAGAGCGCGCGGCGGCTGCTGCTNTCGGCCCGGGACGGCGTGGCCCGCGTCGAGCGCCTCGCGT CGGCGCCCNCCTCGTCTTCCTACTCCTCGGCGCCGCTCGTCGGGGGCGGCGGCGGTGCCGGGGATTCGGCAGCCNCCGAGGAGGTGCGGCGGGAGGTGGCCCAGATCCAGGGGCTGTGCGCGCAGATGGACCGGCTCTGGCGATCCATCCCCGCCAAGGGCCAGCGTGATTTTTGGAAGAGAAAAGTGGAGCAGTTGTTTGAAGAGGTTGATTCGCTAAAGGAAACCCTTGACAGACATTTTTTGCGGCAAAAAAAGAGGGTTTTAGAAaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF309464             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATATTTGATGATGAAGCCCAGGCAATGCAATCAGCTCGTAGCTCCTCTCGTATGCTTGATGAAGCATATGAAACAGGAGTAGCTATCCCTCACAAGTATGCTGACCAGAGGGATCGTCTAAAGAGTGCTCAAAGGAAAGCGTTGGATATTCTGAACACCGTTGGTCTATCAAATTCTGTTTTGAAGCTTATTGAGAGGCGGCACCGTGTGGACAAGTGGATTGCATATGCTGGTATGATGATCACAGTGGGGGTGATGGTTTGTGTTTTGGCGGTGGACGCATTAGTGCTGCAGTGTGTCGGAAACAGCATATTTGTGTTTGGAAGTTGACAGTTGAGACAAGTGGTAGTTCTGAGGATATATCAACAACTGAATGGCAAGAGATTGGATCCCCTTTTTGTTCATGCTCAACTCTGATTGGTAACTAGCGTTACAAGGGCTTTCTCTGGGGGGGCATAAAAGCTGCTTTTCTTTTT AACGCGGGTTTCCGGCATGCCAGTATATATGCCACTATGTCTATGTGGATCAAATTCTTTTCTGTATGCACAT ACAGT AGTC AT ACTATAATTCTGATTCAAGTGTATCC ATGGTCGGTGCAGATATATATACTGCACATGTACAGAAAAACTGATAGGGTTACTGTCTGCGGATTCTAGTTCATTCTGTACAAACATAGTATGCTTAATGATCTTCC                                 ]
[-] EMBL CF309465             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAAAGCGTTGGATATTCTGAACACCGTTGGTCTATCAAATTCTGTTTTGAAGCTTATTGAGAGGCGGCACCGTGTGGACAAGTGGATTGCATATGCTGGTATGATGATCACAGTGGTGGTGAT GTTTGTGTTTTGGCGGTGGACGCATTAGTGCTGCAGTGTGTCGGAAACAGCATATTTGTGTTTGGAAGTTGACAGTTGAGACAAGTGGTAGTTCTGAGGATATATCAACAACTGAATGGCAAGAGATTGGATCCCCTTTTTGTTCATGCTCAACTCTGATTGGTAACTAGCGTTACAAGGGCTTTCTCTGGGGGGGCATAAAAGCTGCTTTTCTTTTTCAACGCGGGTTTCCGGCATGCCAGTATATATGCCACTATGTCTATGTGGATCAAATTCTTTTCTGTATGCACATCACAGTAAGTCTATCACTATAATTCTGATTCAAGTGTATCCTATGGTCGGTGCAGATATATATACTGCACATGTACAGAAAAACTGATAGGGTTACTGTCTGCGGATTCTAGTTCATTCTGTACAAACATAGTATGCTTAATGATCTTCCTTTCCTTTTCCTCTTTTAaaaa           ]
[+] EMBL AU058436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGCTTTCTCTGGGGGGGCATAAAAGCTGCTTTTCTTTTTCAACGCGGGTTTCCGGCATGCCAGTATATATGCCACTATGTCTATGTGGATCAAATTCTTTTCTGTATGCACATCACAGTAAGTCTATCACTATAATTCTGATTCAAGTGTATCCTATGGTCGGTGCAGATATATATACTGCACATGTACAGAAAAACTGATAGGGTTACTGTCTGCGGATTCTAGTTCATTCTGTACAAACATAGTATGCTTAATGATCTTCCTTTCCTTTTCaaaaa                  ]




>consensus_10648#0
CAAAATAATTAAGAAAAAGAAGAAATTAATCCTCCCCTCCTCGATCCCGAGCTCGCGCGA
CAAGTCCGACCACCGCGGCGATGGATTTCTCCGGCGGCGGAGGCGGCGGCGGCGGCGCGA
CGCTGTCGGAGATGTACCAGAGCGCGCGGCGGCTGCTGCTCTCGGCCCGGGACGGCGTGG
CCCGCGTCGAGCGCCTCGCGTCGGCGCCCACCTCGTCTTCCTACTCCTCGGCGCCGCTCG
TCGGGGGCGGCGGCGGTGCCGGGGATTCGGCAGCCGCCGAGGAGGTGCGGCGGGAGGTGG
CCCAGATCCAGGGGCTGTGCGCGCAGATGGACCGGCTCTGGCGATCCATCCCCGCCAAGG
GCCAGCGTGATCTCTGGAAGAGAAAAGTGGAGCAGTTGTCTGAAGAGGTTGATTCGCTAA
AGGAAACCCTTGACAGACATTCTCTGCGGCAAAAAAAGAGGGTTCTAGAAGCAAAAGAAA
GGGCAGAGCTATTTGAGAGAGCTAATGGTGAGTCTTCACATGTCCTTCGGATATTTGATG
ATGAAGCCCAGGCAATGCAATCAGCTCGTAGCTCCTCTCGTATGCTTGATGAAGCATATG
AAACAGGAGTAGCTATCCTTCACAAGTATGCTGACCAGAGGGATCGTCTAAAGAGTGCTC
AAAGGAAAGCGTTGGATATTCTGAACACCGTTGGTCTATCAAATTCTGTTTTGAAGCTTA
TTGAGAGGCGGCACCGTGTGGACAAGTGGATTGCATATGCTGGTATGATGATCACAGTGG
TGGTGATGTTTGTGTTTTGGCGGTGGACGCATTAGTGCTGCAGTGTGTCGGAAACAGCAT
ATTTGTGTTTGGAAGTTGACAGTTGAGACAAGTGGTAGTTCTGAGGATATATCAACAACT
GAATGGCAAGAGATTGGATCCCCTTTTTGTTCATGCTCAACTCTGATTGGTAACTAGCGT
TACAAGGGCTTTCTCTGGGGGGGCATAAAAGCTGCTTTTCTTTTTCAACGCGGGTTTCCG
GCATGCCAGTATATATGCCACTATGTCTATGTGGATCAAATTCTTTTCTGTATGCACATC
ACAGTAAGTCTATCACTATAATTCTGATTCAAGTGTATCCTATGGTCGGTGCAGATATAT
ATACTGCACATGTACAGAAAAACTGATAGGGTTACTGTCTGCGGATTCTAGTTCATTCTG
TACAAACATAGTATGCTTAATGATCTTCCTTTCCTTTTCCTCTTTTATATAACTGGAGTA
CG
clustalw multiple alignements is not computed in this case