|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10656#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2243 fasta sequence
[TCGCATTTGGCTTCCCCCTTCCTTCCTCACCCCAATGCCTCCTCTCCCCTTCTTCCCTCTCCTCTGCCCCCCACGCTCCCACGTCACTGCCAGGTAGGCCCCACCATGCACCAGCTTCCTTCCCCCGCCCCCTCCTCCGCCTCCTCCTCGCCGTCGACGACGACGGCGACGACCACGTCGCTCGTGTCGCGCGCCCGCACCGCGATCCACTCCGCCGCCGCCCGCGTCCTCACCGACATCAAGGCCGACCTCCGAGATGCGGACGGATCCGGGGCGCTCAGGGCGCCGTCCCCGCGGCCATCGGCGGATCGGCACCCCGACTCCATCGCCGCCGTCGTGGGTTCGCCGCGAGACGAGGCCCCAGATATAATCTCCTCCCCAGATGGGGATACCTCAAATATTGAACCTGACTCAACTTCTTCAACAAAGATGGCCTTTCCTTCAGTTTCAGTGGTTAAGCAGCTGGTTGCTGCCATTGACAACGGTAAAAATTTCAAGTCAATGAATGATATGAGGTCTAATGGAGACCAATTACTGAAAGAGAAGGGGGGCTTGAGCTTATCTGTTGTCAAATCACTTGTTCGGCGTGAAAAGGATGAAAGATCGAGTTCTGAATTTGTTGGCGATGATGAAACACAATCTTTGATGTACACATTGTTCAAATTAGAGGAGCATTTTCCCCATGACAAAAGTCAATGCAACTCAGAGTTGCATCACTCAATATCTTTGCCCAAGGATCTACACGGTGCACCACCTGGAAGTTTCACTCATCAAATAGCAGAGACTATTGGCAAAATAAGTTCTGTATACAAAATGGCGTTCTTTTGGCAATCCCTAGTTCTCGAGTTGAAGAAACTATGGTCCGATGGGCAACCGGTGCCTCGAATGCCACTGGATGCTGCTCCAGACTTGAATTGTTGTTTACTGCATCAAGAGATACAAGTTATAAATTGCTGCATTGCCAGGAAAAAACGGAGAAAAGCCGCCAAGGAATCACTGGATTCATTGTTAAAACGTGCAAGTATTGATAACTCCAATCACTTGTATTCAAATGGGGACTCTCCTGACAGCGAGATGTATATAAAAGGTAGTGCTGGTGACAATGTTCTTCGGCTTGGTGCTGATCATCCATCAGAGAACTTAACGTTGTTGGAAACTGGTGAGCTCGTATATTCTCCAACTCTGCAGGAAGGTCCCATTATGACAGCAGAGCTTATAAAAGAAACAGAAGAACTTGTCTTAAGGACTGGAAGTGTTGGTGCTGGGTGTTCTCAACTTCTATCAGATATGCAAGCCTTCAAGGCCGCAAATCCAGGGTGTGTCCTGGAAGACTTCATTAGATGGCACTCTCCACCTGATTGGTCTGAAGATTGTGCAGCAAGCAGCGCAGAAGTTGGGGAGGGCTCATCTAGACGAGGTCGATTAAGTGAGAGAATGCAAACAAAAGAAGGGAACTTGTGGAAGGAATTATGGGGGGCTGCAAAACCAATACCTGCTGTTGAACAGGCGCCTATATATGATGAAGATTTAGCTGTGGAGAGCATTTTTGATGCCTTGGAAGTTATTGAACCGTCAAAACTTTTTGAGCAGCTACTAGCTGTCATTCTTTCTGTATGCTTTGTAGCAGCAGAATTGGTGCTACCAGCAGGTAGCAACTTGTCGAAATTATTCTACGACTGTAAAGATTACATACTCAGCATTTACCAAGATGACATATCAAAAGAGAAGCTAGATGAGATATGCAAGGTCTACGAGACGATGGAAGCCATAGTAACTCACCCTGAAGAAACTCTTCAGATAATGGAGGCACCTGATGAAAAGTCCCCCCTTGAGAGTAAAAACCGGTTCAAGATCAAGCTCAACTTTATCGGCAAAGATCGCCATCCACTGTGGAAGCGTGCACCAAAGGAGGAGAAAAAATCATCACCGAAAGACGAGAAAAGATCGTCAGAGGAAAGGAGCACGAAAATTTTCTCAAACCTTCTTGACAAGAAGGTTTCCATATTCTCCAAGAAGAATGCAAAACCAACAACAGAGGTACCGCCACCACCTCCCCCTTCATCTGCCCCTGGACCATTCGATGATAGTGAGTGGACGATTTTGTAGATGCAAATCGTGGATGTTTCCTTTGTACAATTTGTAGAGTGGTGCCACAAGATGTCGGGAATAAGCTCAAGCTGTAAATACTCCATCCAATTCATTAACCAATCTGAAATAAAATGAAAAAAAAAGAGATGAAGATT]
[+] EMBL AK070461 [TCGCATTTGGCTTCCCCCTTCCTTCCTCACCCCAATGCCTCCTCTCCCCTTCTTCCCTCTCCTCTGCCCCCCACGCTCCCACGTCACTGCCAGGTAGGCCCCACCATGCACCAGCTTCCTTCCCCCGCCCCCTCCTCCGCCTCCTCCTCGCCGTCGACGACGACGGCGACGACCACGTCGCTCGTGTCGCGCGCCCGCACCGCGATCCACTCCGCCGCCGCCCGCGTCCTCACCGACATCAAGGCCGACCTCCGAGATGCGGACGGATCCGGGGCGCTCAGGGCGCCGTCCCCGCGGCCATCGGCGGATCGGCACCCCGACTCCATCGCCGCCGTCGTGGGTTCGCCGCGAGACGAGGCCCCAGATATAATCTCCTCCCCAGATGGGGATACCTCAAATATTGAACCTGACTCAACTTCTTCAACAAAGATGGCCTTTCCTTCAGTTTCAGTGGTTAAGCAGCTGGTTGCTGCCATTGACAACGGTAAAAATTTCAAGTCAATGAATGATATGAGGTCTAATGGAGACCAATTACTGAAAGAGAAGGGGGGCTTGAGCTTATCTGTTGTCAAATCACTTGTTCGGCGTGAAAAGGATGAAAGATCGAGTTCTGAATTTGTTGGCGATGATGAAACACAATCTTTGATGTACACATTGTTCAAATTAGAGGAGCATTTTCCCCATGACAAAAGTCAATGCAACTCAGAGTTGCATCACTCAATATCTTTGCCCAAGGATCTACACGGTGCACCACCTGGAAGTTTCACTCATCAAATAGCAGAGACTATTGGCAAAATAAGTTCTGTATACAAAATGGCGTTCTTTTGGCAATCCCTAGTTCTCGAGTTGAAGAAACTATGGTCCGATGGGCAACCGGTGCCTCGAATGCCACTGGATGCTGCTCCAGACTTGAATTGTTGTTTACTGCATCAAGAGATACAAGTTATAAATTGCTGCATTGCCAGGAAAAAACGGAGAAAAGCCGCCAAGGAATCACTGGATTCATTGTTAAAACGTGCAAGTATTGATAACTCCAATCACTTGTATTCAAATGGGGACTCTCCTGACAGCGAGATGTATATAAAAGGTAGTGCTGGTGACAATGTTCTTCGGCTTGGTGCTGATCATCCATCAGAGAACTTAACGTTGTTGGAAACTGGTGAGCTCGTATATTCTCCAACTCTGCAGGAAGGTCCCATTATGACAGCAGAGCTTATAAAAGAAACAGAAGAACTTGTCTTAAGGACTGGAAGTGTTGGTGCTGGGTGTTCTCAACTTCTATCAGATATGCAAGCCTTCAAGGCCGCAAATCCAGGGTGTGTCCTGGAAGACTTCATTAGATGGCACTCTCCACCTGATTGGTCTGAAGATTGTGCAGCAAGCAGCGCAGAAGTTGGGGAGGGCTCATCTAGACGAGGTCGATTAAGTGAGAGAATGCAAACAAAAGAAGGGAACTTGTGGAAGGAATTATGGGGGGCTGCAAAACCAATACCTGCTGTTGAACAGGCGCCTATATATGATGAAGATTTAGCTGTGGAGAGCATTTTTGATGCCTTGGAAGTTATTGAACCGTCAAAACTTTTTGAGCAGCTACTAGCTGTCATTCTTTCTGTATGCTTTGTAGCAGCAGAATTGGTGCTACCAGCAGGTAGCAACTTGTCGAAATTATTCTACGACTGTAAAGATTACATACTCAGCATTTACCAAGATGACATATCAAAAGAGAAGCTAGATGAGATATGCAAGGTCTACGAGACGATGGAAGCCATAGTAACTCACCCTGAAGAAACTCTTCAGATAATGGAGGCACCTGATGAAAAGTCCCCCCTTGAGAGTAAAAACCGGTTCAAGATCAAGCTCAACTTTATCGGCAAAGATCGCCATCCACTGTGGAAGCGTGCACCAAAGGAGGAGAAAAAATCATCACCGAAAGACGAGAAAAGATCGTCAGAGGAAAGGAGCACGAAAATTTTCTCAAACCTTCTTGACAAGAAGGTTTCCATATTCTCCAAGAAGAATGCAAAACCAACAACAGAGGTACCGCCACCACCTCCCCCTTCATCTGCCCCTGGACCATTCGATGATAGTGAGTGGACGATTTTGTAGATGCAAATCGTGGATGTTTCCTTTGTACAATTTGTAGAGTGGTGCCACAAGATGTCGGGAATAAGCTCAAGCTGTAAATACTCCATCCAATTCATTAACCAATCTGAAATAAAATGAAAAAAAAAGAGATGAAGATT]
[+] EMBL AU181924 [ TTGGCTTCCCCCTTCCTTCCTCACCCCAATGCCTCCTCTCCCCTTCTTCCCTCTCCTCTGCCCCCCACGCTCCCACGTCACTGCCAGGTAGGCCCCACCATGCACCAGCTTCCTTCCCCCGCCCCCTCCTCCGCCTCCTCCTCGCCGTCGACGACGACGGCGACGACCACGTCGCTCGTGTCGCGCGCCCGCACCGCGATCCACTCCGCCGCCGCCCGCGTCCTCACCGACATCAAGGCCGACCTCCGAGATGCGGACGGATCCGGGGCGCTCAGGGCGCCGTCCCCGCGGCCATCGGCGGATCGGCACCCCGACTCCATCGCCGCCGTCGTGGGTTCGCCGCGAGACGAGGCCCCAGATATAATCTCCTCCCCAGATGGGGATACCTCAAATATTGAACCTGACTCAACTTCTTCAACAAAGATGGCCTTTCCTTCAGTTTCAGTG ]
[+] EMBL AI978475 [ GATGAAAAGTCCCCCCTTGAGAGTAAAAACCGGTTCAAGATCAAGCTCAACTTTATCGGCAAAGATCGCCATCCACTGTGGAAGCGTGCACCAAAGGAGGAGAAAAAATCATCACCGAAAGACGAGAAAAGATCGTCAGAGGAAAGGAGCACGAAAATTTTCTCAAACCTTCTTGACAAGAAGGTTTCCATATTCTCCAAGAAGAATGCAAAACCAACAACAGAGGTACCGCCACCACCTCCCCCTTCANNNNNCCCTGGACCATTCGATGATAGTGAGTGGACGATTTTGTAGATGCAAATCNNGGATGTTTCCTTTGTACAATTTGTAGAGTGGNNCCACAAGATNNNNNGAATAAGCTCAAGCTGTAAATAC ]
[+] EMBL AI978476 [ GAGGAGAAAAAATCATNNNCGAANGACGAGAAAAGATCGTCNGAGGAAAGGAGNACGAAAATTTTCTCAAACCTTCTTGACAAGAAGGTTTCCATATTCTCCAAGAAGAATGCAAAACCAACAACAGAGGTACCGCCACCACCTCCCCCTTCATCTGCCCCTGGACCATTCGATGATAGTGAGTGGACGATTTTGTAGATGCAAATCGTGGATGTTTCCTTTGTACAATTTGTAGAGTGGTGCCACAAGATGTCGGGAATAAGCTCAAGCTGTAAATACTCCATCCAATTCATTAACCAATC ]
consensusID : consensus_10656#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 681 fasta sequence
[TTTTTTTTTTTTTGTTGATAAAATGCCCTTGTTAAGAAATTGTTCCTTGGAAGTGATGTATACTTGCAATACAAAGGTGTTAAGACGCATGAGGTCATTACAGGAAGACCTGAAGTGAACTTGATCTGAGTGACTAGATATGAACAATCATAGCTAATATGAAGCACCATATTTATTTATTTTAATTAATGCAGTTGAAGAAACTATGGTCCGATGGGCAACCGGTGCCTCGAATGCCACTGGATGCTGCTCCAGACTTGAATTGTTGTTTACTGCATCAAGAGATACAAGTTATAAATTGCTGCATTGCCAGAAAAAAACGGAGAAAAGCCGCCAAGGAATCACTGGATTCATTGTTAAAACGTGCAAGTATTGATAACTCCAATCACTTGTATTCAAATGGGGACTCTCCTGACAGCGAGATGTATATAAAAGGTAGTGCTGGTGACAATGTTCTTCGGCTTGGTGCTGATCATCCATCAGAGAACTTAACGTTGTTGGAAACTGGTGAGCTCGGATGTTTTCCAACTCTGCAGGTAAGCTGCTGGTTTCTCTGTTTCTTTTTTCAGGGAAGCGTTCTTTTACCATCGAATGTGAGTACCTGCGGAAATAGCATGCTATCTGGGGGTACCCAGCTTTCGTTATGCTTTGGACGCAGCAGAATTGGGNGTACCGATGGTG]
[+] EMBL CA762447 [TTTTTTTTTTTTTGTTGATAAAATGCCCTTGTTAAGAAATTGTTCCTTGGAAGTGATGTATACTTGCAATACAAAGGTGTTAAGACGCATGAGGTCATTACAGGAAGACCTGAAGTGAACTTGATCTGAGTGACTAGATATGAACAATCATAGCTAATATGAAGCACCATATTTATTTATTTTAATTAATGCAGTTGAAGAAACTATGGTCCGATGGGCAACCGGTGCCTCGAATGCCACTGGATGCTGCTCCAGACTTGAATTGTTGTTTACTGCATCAAGAGATACAAGTTATAAATTGCTGCATTGCCAGAAAAAAACGGAGAAAAGCCGCCAAGGAATCACTGGATTCATTGTTAAAACGTGCAAGTATTGATAACTCCAATCACTTGTATTCAAATGGGGACTCTCCTGACAGCGAGATGTATATAAAAGGTAGTGCTGGTGACAATGTTCTTCGGCTTGGTGCTGATCATCCATCAGAGAACTTAACGTTGTTGGAAACTGGTGAGCTCGGATGTTTTCCAACTCTGCAGGTAAGCTGCTGGTTTCTCTGTTTCTTTTTTCAGGGAAGCGTTCTTTTACCATCGAATGTGAGTACCTGCGGAAATAGCATGCTATCTGGGGGTACCCAGCTTTCGTTATGCTTTGGACGCAGCAGAATTGGGNGTACCGATGGTG]
consensusID : consensus_10656#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 408 fasta sequence
[AAAAGTCCCCCCTTGAGAGTAAAAACCGGTTCAAGATCAAGCTCAACTTTATCGGCAAAGATCGCCATCCNCTGTGGAAGCGTGCNCCAAAGGAGGAGAAAAAATCATCNCCGAAAATTTTCTCAAACCTTCTTGACAAGAAGGTTTCCATATTCTCCAAGAAGAATGCAAAACCAACAACAGAGGTACCGCCACCACCTCCCCCTTCATCTGCCCCTGGACCATTCGATGATAGTGAGTGGACGATTTTGTAGATGCAAATCGTGGATGTTTCCTTTGTACAATTTGTAGAGTGGTGCCACAAGATGTCGGGAATAAGCTCAAGCTGTAAATACTCCATCCAATTCATTAACCAATCTGAAATAAAATGAAAAAAAAAGAGATGAAGATTTTNCCTAAAAAAAAAAA]
[+] EMBL AU181923 [AAAAGTCCCCCCTTGAGAGTAAAAACCGGTTCAAGATCAAGCTCAACTTTATCGGCAAAGATCGCCATCCNCTGTGGAAGCGTGCNCCAAAGGAGGAGAAAAAATCATCNCCGAAAATTTTCTCAAACCTTCTTGACAAGAAGGTTTCCATATTCTCCAAGAAGAATGCAAAACCAACAACAGAGGTACCGCCACCACCTCCCCCTTCATCTGCCCCTGGACCATTCGATGATAGTGAGTGGACGATTTTGTAGATGCAAATCGTGGATGTTTCCTTTGTACAATTTGTAGAGTGGTGCCACAAGATGTCGGGAATAAGCTCAAGCTGTAAATACTCCATCCAATTCATTAACCAATCTGAAATAAAATGAAAAAAAAAGAGATGAAGATTTTNCCTAAAAAAAAAAA]
consensusID : consensus_10656#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 278 fasta sequence
[GCGTCTTCCCACTATTTTCCNGTCCAAGTAATGAATGCACAAACCAACCAACCAGAGGTACCGCCACCACCTCCCCCTTCATCTGCCCCCTGGACCACTTCGACTGATAGTGAGTGGACCGATTTTGTAGATGCAAATCGTGGATGTTTCCTTTGTACAATTTGTAGACGTGGTGCCACCAGATGTCGGGAATAAGCTCAGCTGTAAATACTCCATCCAATTCATTAACCAATCTGAAATAAAATGACCCAAAAGAGATGAAGATTTTACCTAAAAAA]
[+] EMBL BQ906189 [GCGTCTTCCCACTATTTTCCNGTCCAAGTAATGAATGCACAAACCAACCAACCAGAGGTACCGCCACCACCTCCCCCTTCATCTGCCCCCTGGACCACTTCGACTGATAGTGAGTGGACCGATTTTGTAGATGCAAATCGTGGATGTTTCCTTTGTACAATTTGTAGACGTGGTGCCACCAGATGTCGGGAATAAGCTCAGCTGTAAATACTCCATCCAATTCATTAACCAATCTGAAATAAAATGACCCAAAAGAGATGAAGATTTTACCTAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 TCGCATTTGGCTTCCCCCTTCCTTCCTCACCCCAATGCCTCCTCTCCCCTTCTTCCCTCT 60
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 CCTCTGCCCCCCACGCTCCCACGTCACTGCCAGGTAGGCCCCACCATGCACCAGCTTCCT 120
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 TCCCCCGCCCCCTCCTCCGCCTCCTCCTCGCCGTCGACGACGACGGCGACGACCACGTCG 180
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 CTCGTGTCGCGCGCCCGCACCGCGATCCACTCCGCCGCCGCCCGCGTCCTCACCGACATC 240
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 AAGGCCGACCTCCGAGATGCGGACGGATCCGGGGCGCTCAGGGCGCCGTCCCCGCGGCCA 300
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 TCGGCGGATCGGCACCCCGACTCCATCGCCGCCGTCGTGGGTTCGCCGCGAGACGAGGCC 360
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 CCAGATATAATCTCCTCCCCAGATGGGGATACCTCAAATATTGAACCTGACTCAACTTCT 420
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 TCAACAAAGATGGCCTTTCCTTCAGTTTCAGTGGTTAAGCAGCTGGTTGCTGCCATTGAC 480
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 AACGGTAAAAATTTCAAGTCAATGAATGATATGAGGTCTAATGGAGACCAATTACTGAAA 540
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 GAGAAGGGGGGCTTGAGCTTATCTGTTGTCAAATCACTTGTTCGGCGTGAAAAGGATGAA 600
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 AGATCGAGTTCTGAATTTGTTGGCGATGATGAAACACAATCTTTGATGTACACATTGTTC 660
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 AAATTAGAGGAGCATTTTCCCCATGACAAAAGTCAATGCAACTCAGAGTTGCATCACTCA 720
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 ATATCTTTGCCCAAGGATCTACACGGTGCACCACCTGGAAGTTTCACTCATCAAATAGCA 780
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 GAGACTATTGGCAAAATAAGTTCTGTATACAAAATGGCGTTCTTTTGGCAATCCCTAGTT 840
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 CTCGAGTTGAAGAAACTATGGTCCGATGGGCAACCGGTGCCTCGAATGCCACTGGATGCT 900
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 GCTCCAGACTTGAATTGTTGTTTACTGCATCAAGAGATACAAGTTATAAATTGCTGCATT 960
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 GCCAGGAAAAAACGGAGAAAAGCCGCCAAGGAATCACTGGATTCATTGTTAAAACGTGCA 1020
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 AGTATTGATAACTCCAATCACTTGTATTCAAATGGGGACTCTCCTGACAGCGAGATGTAT 1080
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 ATAAAAGGTAGTGCTGGTGACAATGTTCTTCGGCTTGGTGCTGATCATCCATCAGAGAAC 1140
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 TTAACGTTGTTGGAAACTGGTGAGCTCGTATATTCTCCAACTCTGCAGGAAGGTCCCATT 1200
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 ATGACAGCAGAGCTTATAAAAGAAACAGAAGAACTTGTCTTAAGGACTGGAAGTGTTGGT 1260
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 GCTGGGTGTTCTCAACTTCTATCAGATATGCAAGCCTTCAAGGCCGCAAATCCAGGGTGT 1320
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 GTCCTGGAAGACTTCATTAGATGGCACTCTCCACCTGATTGGTCTGAAGATTGTGCAGCA 1380
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 AGCAGCGCAGAAGTTGGGGAGGGCTCATCTAGACGAGGTCGATTAAGTGAGAGAATGCAA 1440
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 ACAAAAGAAGGGAACTTGTGGAAGGAATTATGGGGGGCTGCAAAACCAATACCTGCTGTT 1500
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 GAACAGGCGCCTATATATGATGAAGATTTAGCTGTGGAGAGCATTTTTGATGCCTTGGAA 1560
consensus_10656#1 ------------------------------------------------------------
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 GTTATTGAACCGTCAAAACTTTTTGAGCAGCTACTAGCTGTCATTCTTTCTGTATGCTTT 1620
consensus_10656#1 -----------------------------------TTTTTTTTTTTTTGTTGATAAAATG 25
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 GTAGCAGCAGAATTGGTGCTACCAGCAGGTAGCAACTTGTCGAAATTATTCTACGACTGT 1680
consensus_10656#1 CCCTTGTTAAGAAATTGTTCCTTGGAAGTGATGTATACTTGCAATACAAAGGTGTTAAGA 85
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 AAAGATTACATACTCAGCATTTACCAAGATGACATATCAAAAGAGAAGCTAGATGAGATA 1740
consensus_10656#1 CGCATGAGGTCATTACAGGAAGACCTGAAGTGAACTTGATCTGAGTGACTAGATATGAAC 145
consensus_10656#2 ------------------------------------------------------------
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 TGCAAGGTCTACGAGACGATGGAAGCCATAGTAACTCACCCTGAAGAAACTCTTCAGATA 1800
consensus_10656#1 AATCATAGCTAATATGAAGCACCATATTTATTTATTTTAATTAATGCAGTTGAAGAAACT 205
consensus_10656#2 ----------------AAAAGTCCCCCCTTGAGAGTAAAAACCGGTTCAAGATCAAGCTC 44
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 ATGGAGGCACCTGATGAAAAGTCCCCCCTTGAGAGTAAAAACCGGTTCAAGATCAAGCTC 1860
consensus_10656#1 ATGGTCCGATGGGCAACCGGTGCCTCGAATGCCACTGGATGCTGCTCCAGACTTGAATTG 265
consensus_10656#2 AACTTTATCG-GCAAAGATCGCCATCCNCTGTGGAAGCGTGCNCCAAAGGAGGAGAAAAA 103
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 AACTTTATCG-GCAAAGATCGCCATCCACTGTGGAAGCGTGCACCAAAGGAGGAGAAAAA 1919
consensus_10656#1 TTGTTTACTGCATCAAGAGATACAAGTTATAAATTGCTGCATTGCCAGAAAAAAACGGAG 325
consensus_10656#2 ATCATCNCCGAAA------------------------------------ATTTTCTCAAA 127
consensus_10656#3 ------------------------------------------------------------
consensus_10656#0 ATCATCACCGAAAGACGAGAAAAGATCGTCAGAGGAAAGGAGCACGAAAATTTTCTCAAA 1979
consensus_10656#1 AAAAGCCGCCAAGGAATCACTGGATTCATTGTTAAAACGTGCAAGTATTGATAACTCCAA 385
consensus_10656#2 CCTTCT---TGACAAGAAGGTTTCCATATTCTCCAAGAAGAATGCA-AAACCAAC--AAC 181
consensus_10656#3 GCGTCT---TCCCACTA----TTTTCCNGTCCAAGTAATGAATGCACAAACCAACCAACC 53
consensus_10656#0 CCTTCT---TGACAAGAAGGTTTCCATATTCTCCAAGAAGAATGCA-AAACCAAC--AAC 2033
consensus_10656#1 TCACTTGTATTCAAATGGGGACTCTCCTGACAGCGAGATGTATATAAAAGGTAGT--GCT 443
* * * * * * * * ** * ** *
consensus_10656#2 AGAGGTACCG--CCACCACCTCCCCCT--TCATCTGCCCC-TGGACCA-TTCGA-TGATA 234
consensus_10656#3 AGAGGTACCG--CCACCACCTCCCCCT--TCATCTGCCCCCTGGACCACTTCGACTGATA 109
consensus_10656#0 AGAGGTACCG--CCACCACCTCCCCCT--TCATCTGCCCC-TGGACCA-TTCGA-TGATA 2086
consensus_10656#1 GGTGACAATGTTCTTCGGCTTGGTGCTGATCATCCATCAGAGAACTTAACGTTGTTGGAA 503
* * * * * * * * ** ***** * * ** *
consensus_10656#2 GTGAGTGGAC---GATTTTGTAGA----TGCAAATC-GTGGATGTTTCCTTTGTACAATT 286
consensus_10656#3 GTGAGTGGACC--GATTTTGTAGA----TGCAAATC-GTGGATGTTTCCTTTGTACAATT 162
consensus_10656#0 GTGAGTGGAC---GATTTTGTAGA----TGCAAATC-GTGGATGTTTCCTTTGTACAATT 2138
consensus_10656#1 ACTGGTGAGCTCGGATGTTTTCCAACTCTGCAGGTAAGCTGCTGGTTTCTCTGTTTCTTT 563
*** * *** ** * * **** * * * ** ** ** *** **
consensus_10656#2 TGTAGA-GTGGTGCCACAAGAT-GTCGGGAATAAGCTCAAGCTGTAA--ATACTCCATCC 342
consensus_10656#3 TGTAGACGTGGTGCCACCAGAT-GTCGGGAATAAGCTCA-GCTGTAA--ATACTCCATCC 218
consensus_10656#0 TGTAGA-GTGGTGCCACAAGAT-GTCGGGAATAAGCTCAAGCTGTAA--ATACTCCATCC 2194
consensus_10656#1 TTTCAGGGAAGCGTTCTTTTACCATCGAATGTGAGTACCTGCGGAAATAGCATGCTATCT 623
* * * * * * *** * ** * ** * ** * * ***
consensus_10656#2 AATTCATTAACCAATCT--GAAATAAAATGAAAAAAAAAGAGATGAAGATTTTNCCTAAA 400
consensus_10656#3 AATTCATTAACCAATCT--GAAATAAAATGACCCAAAA-GAGATGAAGATTTTACCTAAA 275
consensus_10656#0 AATTCATTAACCAATCT--GAAATAAAATGAAAAAAAAAGAGATGAAGATT--------- 2243
consensus_10656#1 GGG--GGTACCCAGCTTTCGTTATGCTTTGGACGCAGCAGAATTGGGNGTACCGATGGTG 681
** *** * * ** ** * ** ** *
consensus_10656#2 AAAAAAAA 408
consensus_10656#3 AAA----- 278
consensus_10656#0 --------
consensus_10656#1 --------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||