cluster # 10673

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Oryza sativa
cluster # 10673 cluster # 10673 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10673#0 length = 1201 sequences # 6

consensus_10673#1 length = 856 sequences # 1
consensus_10673#2 length = 370 sequences # 1

consensusID : consensus_10673#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1201
fasta sequence

                              [TTCCCTTTCCTCTCCTCCGCCGCCGCTCCCCCGACTCCGGCGAGCCCCCTTCCCCCCACCCATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGATCTCCCGGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCTCAGGAGTACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCAAACGCCATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCCTGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTCCAATATGTTGGGAATCC-TTCAACCTTGTTGA-GAATGTTCCCTATGTCTTGTGGTG-CGGTCATACAATGTGCAAGAATTGCATC-TTGGGTCTTCAATGGGCTGTCGTCAAGTTCCCAACCCTTCCTATACAACTGCCTCTCTTCATCTCATGTCCATGGTGTAACCT-GTTATCTTTCCGGCTAGTTTA-CAAGGGAAACCTCAAGTTCCCACGCAAGAACTATTTT-CTGCTATGGATGGTTGAGAGCATGAATGGCGAGAGAGCAAAGTTCCATTCCCCTAGTCATGAAGAGCGCCATTCTTTATGCCCTTCTGGTGGTGGCCCAAGTTCCAGTCAACACCATCGAAGACCTGCTCCACGAACAGAAAGCGCCAGTGGCAGAGAAAGGAGTGTTGCTGGCAACGTTTTCAATACTTACAGCATCAGTGCATCTCTCCAAAAGATAATGTTGTCTTTTGTTCAGATGACAGCCAAGTTTCCACTCGTGATAATTTTCCTTCTGATAGTTCTATATGCTGTCCCTGCAAGCGTAGCAGTTCTAGTATTGTATGTCCTTGTTACAGTTTTGTTTGCACTGCCGTCCTTTTTGATCCTCTACTTTGCTTATCCCAGTTTGGATTGGCTCGTTAGAGAGATCTTCAATTGAGTTATATTGTACTCCATGTCATTACAGTTTATAACTCAGCAGCAGAAAATTTAGCATTTGCAATCTCATGTGCTCTGGGGGAGGATGTCAAGTGTGATTTCTTATCCATTCGATTGAGGCCTTCAGGGACAGTAGTTGTAAGATGGAACTCTAATTATTGCATTGATATACATGAATCACTCAGGTTTTACTGTAAAAAAAA]

[+] EMBL AU069485             [TTCCCTTTCCTCTCCTCCGCCGCCGCTCCCCCGACTCCGGCGAGCCCCCTTCCCCCCACCCATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGATCTCCCGGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCTCAGGAGTACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCAAACGCCATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCCTGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTNCAATATGTTGGGAATCCTTTCAACCTTGTTGA GAATGTT CCTATGTCTTGTGGTGCCGGTCATtcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK111910             [    CTTTCCTCTCCTCCGCCGCCGCTCCCCCGACTCCGGCGAGCCCCCTTCCCCCCACCCATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGATCTCCCGGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCTCAGGAGTACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCAAACGCCATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCCTGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTCCAATATGTTGGGAATCC TTCAACCTTGTTGA GAATGTTCCCTATGTCTTGTGGTG CGGTCATACAATGTGCAAGAATTGCATC TTGGGTCTTCAATGGGCTGTCGTCAAGTTCCCAACCCTTCCTATACAACTGCCTCTCTTCATCTCATGTCCATGGTGTAACCT GTTATCTTTCCGGCTAGTTTA CAAGGGAAACCTCAAGTTCCCACGCAAGAACTATTTT CTGCTATGGATGGTTGAGAGCATGAATGGCGAGAGAGCAAAGTTCCATTCCCCTAGTCATGAAGAGCGCCATTCTTTATGCCCTTCTGGTGGTGGCCCAAGTTCCAGTCAACACCATCGAAGACCTGCTCCACGAACAGAAAGCGCCAGTGGCAGAGAAAGGAGTGTTGCTGGCAACGTTTTCAATACTTACAGCATCAGTGCATCTCTCCAAAAGATAATGTTGTCTTTTGTTCAGATGACAGCCAAGTTTCCACTCGTGATAATTTTCCTTCTGATAGTTCTATATGCTGTCCCTGCAAGCGTAGCAGTTCTAGTATTGTATGTCCTTGTTACAGTTTTGTTTGCACTGCCGTCCTTTTTGATCCTCTACTTTGCTTATCCCAGTTTGGATTGGCTCGTTAGAGAGATCTTCAATTGAGTTATATTGTACTCCATGTCATTACAGTTTATAACTCAGCAGCAGAAAATTTAGCATTTGCAATCTCATGTGCTCTGGGGGAGGATGTCAAGTGTGATTTCTTATCCATTCGATTGAGGCCTTCAGGGACAGTAGTTGTAAGATGGAACTCTAATTATTGCATTGATATACATGAATCACTCAG                  ]
[+] EMBL C72277               [        CCTCTCCTCCGCCGCCGCTCCCCCGACTCCGGCGAGCCCCCTTCCCCCCACCCATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGATCTCCCGGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCTCAGGAGTACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCAAACGCCATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCCTGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTCCAATATGTTGGGAATCC TTCAANCTTGTTGAGGAATGTTCCCTATGTCTTGTGGTG CGGTCATACAATGTGCAAGAATTGCATCTTTGGGTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK111964             [                  GCCGCCGCTCCCCCGACTCCGGCGAGCCCCCTTCCCCCCACCCATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGATCTCCCGGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCTCAGGAGTACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCAAACGCCATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCCTGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTCCAATATGTTGGGAATCC TTCAACCTTGTTGA GAATGTTCCCTATGTCTTGTGGTG CGGTCATACAATGTGCAAGAATTGCATC TTGGGTCTTCAATGGGCTGTCGTCAAGTTCCCAACCCTTCCTATACAACTGCCTCTCTTCATCTCATGTCCATGGTGTAACCT GTTATCTTTCCGGCTAGTTTA CAAGGGAAACCTCAAGTTCCCACGCAAGAACTATTTT CTGCTATGGATGGTTGAGAGCATGAATGGCGAGAGAGCAAAGTTCCATTCCCCTAGTCATGAAGAGCGCCATTCTTTATGCCCTTCTGGTGGTGGCCCAAGTTCCAGTCAACACCATCGAAGACCTGCTCCACGAACAGAAAGCGCCAGTGGCAGAGAAAGGAGTGTTGCTGGCAACGTTTTCAATACTTACAGCATCAGTGCATCTCTCCAAAAGATAATGTTGTCTTTTGTTCAGATGACAGCCAAGTTTCCACTCGTGATAATTTTCCTTCTGATAGTTCTATATGCTGTCCCTGCAAGCGTAGCAGTTCTAGTATTGTATGTCCTTGTTACAGTTTTGTTTGCACTGCCGTCCTTTTTGATCCTCTACTTTGCTTATCCCAGTTTGGATTGGCTCGTTAGAGAGATCTTCAATTGAGTTATATTGTACTCCATGTCATTACAGTTTATAACTCAGCAGCAGAAAATTTAGCATTTGCAATCTCATGTGCTCTGGGGGAGGATGTCAAGTGTGATTTCTTATCCATTCGATTGAGGCCTTCAGGGACAGTAGTTGTAAGATGGAACTCTAATTATTGCATTGATATACATGAATCACTCAG                  ]
[-] EMBL CB675740             [                                                                                                                                                                                                                                                                 GAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCCTGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTCCAATATGTTGGGAATCC TTCAACCTTGTTGA GAATGTTCCCTATGTCTTGTGGTG CGGTCATACAATGTGCAAGAATTGCATC TTGGGTCTTCAATGGGCTGTCGTCAAGTTCCCAACCCTTCCTATACAACTGCCTCTCTTCATCTCATGTCCATGGTGTAACCT GTTATCTTTCCGGCTAGTTTA CAAGGGAAACCTCAAGTTCCCACGCAAGAACTATTTT CTGCTATGGATGGTTGAGAGCATGAATGGCGAGAGAGCAAAGTTCCATTCCCCTAGTCATGAAGAGCGCCATTCTTTATGCCCTTCTGGTGGTGGCCCAAGTTCCAGTCAACACCATCGAAGACCTGCTCCACGAACAGAAAGCGCCAGTGGCAGAGAAAGGAGTGTTGCTGGCAACGTTTTCAATACTTACAGCATCAGTGCATCTCTCCAAAAGATAATGTTGTCTTTTGTTCAGATGACAGCCAAGTTTCCACTCGTGATAATTTTCCTTCTGATAGTTCTATATGCTGTCCCTGCAAGCGTAGCAGTTCTAGTATTGTATGTCCTTGTTACAGTTTTGTTTGCACTGCCGTCCTTTTTGATCCTCTACTTTGCTTATCCCAGTTTGGATTGGCTCGTTAGAGAGATCTTCAATTGAGTTATATTGTACTCCAGGTCATTACAGTTTATAACTCAGCAGCAGAAAAT                                                                                                                                                        ]
[+] EMBL AU093931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGGTGTACCCTGGTAACCTTTCCGGCTAGTTTACCAAGGNAACCCTCAAGTCCCCACGCAAGAACTATTTTNCTGCTATGGATGGTTGAGAGCATGAATGGCGNGAGAGCAAAGTTCCATTCCCCTAGTCATGAAGAGCGCCATTCTTTATGCCCTTCTGGTGGTGGCCCAAGTTCCAGTCAACACCATCGAAGACCTGCTCCACGAACAGAAAGCGCCAGTGGCAGAGAAAGGAGTGTTGCTGGCAACGTTTTCAATACTTACAGCATCAGTGCATCTCTCCAAAAGATAATGTTGTCTTTTGTTCAGATGACAGCCAAGTTTCCACTCGTGATAATTTTCCTTCTGATAGTTCTATATGCTGTCCCTGCAAGCGTAGCAGTTCTAGTATTGTATGTCCTTGTTACAGTTTTGTTTGCACTGCCGTCCTTTTTGATCCTCTACTTTGCTTATCCCAGTTTGGATTGGCTCGTTAGAGAGATCTTCAATTGAGTTATATTGTACTCCATGTCATTACAGTTTATAACTCAGCAGCAGAAAATTTAGCATTTGCAATCTCATGTGCTCTGGGGGAGGATGTCAAGTGTGATTTCTTATCCATTCGATTGAGGCCTTCAGGGACAGTAGTTGTAAGATGGAACTCTAATTATTGCATTGATATACATGAATCACTCAGGTTTTACTGTAAAAAAAA]




>consensus_10673#0
TTCCCTTTCCTCTCCTCCGCCGCCGCTCCCCCGACTCCGGCGAGCCCCCTTCCCCCCACC
CATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGATCTCCC
GGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCTCAGGAG
TACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCAAACGCC
ATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCCTGAT
TGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTCCAATA
TGTTGGGAATCCTTCAACCTTGTTGAGAATGTTCCCTATGTCTTGTGGTGCGGTCATACA
ATGTGCAAGAATTGCATCTTGGGTCTTCAATGGGCTGTCGTCAAGTTCCCAACCCTTCCT
ATACAACTGCCTCTCTTCATCTCATGTCCATGGTGTAACCTGTTATCTTTCCGGCTAGTT
TACAAGGGAAACCTCAAGTTCCCACGCAAGAACTATTTTCTGCTATGGATGGTTGAGAGC
ATGAATGGCGAGAGAGCAAAGTTCCATTCCCCTAGTCATGAAGAGCGCCATTCTTTATGC
CCTTCTGGTGGTGGCCCAAGTTCCAGTCAACACCATCGAAGACCTGCTCCACGAACAGAA
AGCGCCAGTGGCAGAGAAAGGAGTGTTGCTGGCAACGTTTTCAATACTTACAGCATCAGT
GCATCTCTCCAAAAGATAATGTTGTCTTTTGTTCAGATGACAGCCAAGTTTCCACTCGTG
ATAATTTTCCTTCTGATAGTTCTATATGCTGTCCCTGCAAGCGTAGCAGTTCTAGTATTG
TATGTCCTTGTTACAGTTTTGTTTGCACTGCCGTCCTTTTTGATCCTCTACTTTGCTTAT
CCCAGTTTGGATTGGCTCGTTAGAGAGATCTTCAATTGAGTTATATTGTACTCCATGTCA
TTACAGTTTATAACTCAGCAGCAGAAAATTTAGCATTTGCAATCTCATGTGCTCTGGGGG
AGGATGTCAAGTGTGATTTCTTATCCATTCGATTGAGGCCTTCAGGGACAGTAGTTGTAA
GATGGAACTCTAATTATTGCATTGATATACATGAATCACTCAGGTTTTACTGTAAAAAAA
A

consensusID : consensus_10673#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 856
fasta sequence

                              [TCCCCCGACTCCGGCGAGCCCCCTTCCCCCCACCCATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGATCTCCCGGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCTCAGGAGTACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCAAACGCCATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCCTGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTCCAATATGTTGGGAATCCTTCAACCTTGTTGAGAATGTTCCCTATGTCTTGTGGTGCGGTCATACAATGTGCAAGAATTGCATCTTGGGTCTTCAATGGGCTGTCGTCAAGTTCCCAACCCTTCCTATACAACTGCCTCTCTTCATCTCATGTGCATGGTGTAACCTGTTATCTGTCCGGCTAGTTTACAAGGGGAACCTCAAGTTCCACGCAGGACCTATTTCTGTATGATGGTTGAAACATGATGGCACAGACAAAGTCCATTCCCTAGCATGAGAGCCCATCTTATGCCCTTTGGGTGGCCAAGTCCGTCACACCTTGAAAACTGTCACGACTGAAGGCTGTGGAAAAAGGATGTTCTGCACGGTCAATCTACGGTCAGGATTTCAAGAAAGGTGGTTTTCAAACACCATTACTCGGAATTCCTGATACTAGGTGCTGACGCATTAAATGAGGCGTCTGTGGTCGCGCTTTGCCTCTTTCCCGATCGGAGTGATATGGCATTGCGAGGAGGACGGCTATGAGAAG]

[+] EMBL AW155190             [TCCCCCGACTCCGGCGAGCCCCCTTCCCCCCACCCATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGATCTCCCGGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCTCAGGAGTACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCAAACGCCATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCCTGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTCCAATATGTTGGGAATCCTTCAACCTTGTTGAGAATGTTCCCTATGTCTTGTGGTGCGGTCATACAATGTGCAAGAATTGCATCTTGGGTCTTCAATGGGCTGTCGTCAAGTTCCCAACCCTTCCTATACAACTGCCTCTCTTCATCTCATGTGCATGGTGTAACCTGTTATCTGTCCGGCTAGTTTACAAGGGGAACCTCAAGTTCCACGCAGGACCTATTTCTGTATGATGGTTGAAACATGATGGCACAGACAAAGTCCATTCCCTAGCATGAGAGCCCATCTTATGCCCTTTGGGTGGCCAAGTCCGTCACACCTTGAAAACTGTCACGACTGAAGGCTGTGGAAAAAGGATGTTCTGCACGGTCAATCTACGGTCAGGATTTCAAGAAAGGTGGTTTTCAAACACCATTACTCGGAATTCCTGATACTAGGTGCTGACGCATTAAATGAGGCGTCTGTGGTCGCGCTTTGCCTCTTTCCCGATCGGAGTGATATGGCATTGCGAGGAGGACGGCTATGAGAAG]




>consensus_10673#1
TCCCCCGACTCCGGCGAGCCCCCTTCCCCCCACCCATCGGCGCGGAGGACGTTGCCGGGA
TGAGCGTCTCCCCTTCAACCGGACGCGATCTCCCGGGGCGCTCCCGTATGCCCTTGCGCT
GCTAGAGATCCGGGCTCTTCTCGGATCTCAGGAGTACAAGATATAGTGTACCAGCTCTCT
CTCATTCAACATGTGGAGTTTTGCGTCAAACGCCATAGCTGGAAGCATAAGGAAAAAAGC
ACAGCCCTCAAAATGCAGTCAATCCAATCCTGATTGCTCTGATGATGATGTTTCTTCATG
TGCAAGTAGAGAGGAAGGCCTTGAATGTCCAATATGTTGGGAATCCTTCAACCTTGTTGA
GAATGTTCCCTATGTCTTGTGGTGCGGTCATACAATGTGCAAGAATTGCATCTTGGGTCT
TCAATGGGCTGTCGTCAAGTTCCCAACCCTTCCTATACAACTGCCTCTCTTCATCTCATG
TGCATGGTGTAACCTGTTATCTGTCCGGCTAGTTTACAAGGGGAACCTCAAGTTCCACGC
AGGACCTATTTCTGTATGATGGTTGAAACATGATGGCACAGACAAAGTCCATTCCCTAGC
ATGAGAGCCCATCTTATGCCCTTTGGGTGGCCAAGTCCGTCACACCTTGAAAACTGTCAC
GACTGAAGGCTGTGGAAAAAGGATGTTCTGCACGGTCAATCTACGGTCAGGATTTCAAGA
AAGGTGGTTTTCAAACACCATTACTCGGAATTCCTGATACTAGGTGCTGACGCATTAAAT
GAGGCGTCTGTGGTCGCGCTTTGCCTCTTTCCCGATCGGAGTGATATGGCATTGCGAGGA
GGACGGCTATGAGAAG

consensusID : consensus_10673#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 370
fasta sequence

                              [CCAGAGGCCGAGCCAAGGGGTGTTGCTGGCAACGTTTTGAATACTTACAGCATCAGGGCATTTTTCCAAAAGATAATGTTGTTTTTTGTTCAGATGACAGCCAAGTTTCCCCTCGGGATAATTTTCCTTTTGATAGTTTTATATGCGGTCCCTGCAAGGGTAGCAGTTTTAGTATTGTATGTCCCTGTTACAGTTTTGTTTGCCCCCCCGTCCTTTTTGATCCTTTACTTTGCTTATCCCCGTTTGGATTGGCTCGTTAAAGAGATTTTCAATTGAGTTATATTGTACTCCCGGTCCTTCCAGTTTATAACTCAGCAGCAGAAAATTTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763176             [CCAGAGGCCGAGCCAAGGGGTGTTGCTGGCAACGTTTTGAATACTTACAGCATCAGGGCATTTTTCCAAAAGATAATGTTGTTTTTTGTTCAGATGACAGCCAAGTTTCCCCTCGGGATAATTTTCCTTTTGATAGTTTTATATGCGGTCCCTGCAAGGGTAGCAGTTTTAGTATTGTATGTCCCTGTTACAGTTTTGTTTGCCCCCCCGTCCTTTTTGATCCTTTACTTTGCTTATCCCCGTTTGGATTGGCTCGTTAAAGAGATTTTCAATTGAGTTATATTGTACTCCCGGTCCTTCCAGTTTATAACTCAGCAGCAGAAAATTTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10673#2
CCAGAGGCCGAGCCAAGGGGTGTTGCTGGCAACGTTTTGAATACTTACAGCATCAGGGCA
TTTTTCCAAAAGATAATGTTGTTTTTTGTTCAGATGACAGCCAAGTTTCCCCTCGGGATA
ATTTTCCTTTTGATAGTTTTATATGCGGTCCCTGCAAGGGTAGCAGTTTTAGTATTGTAT
GTCCCTGTTACAGTTTTGTTTGCCCCCCCGTCCTTTTTGATCCTTTACTTTGCTTATCCC
CGTTTGGATTGGCTCGTTAAAGAGATTTTCAATTGAGTTATATTGTACTCCCGGTCCTTC
CAGTTTATAACTCAGCAGCAGAAAATTTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10673#0      TTCCCTTTCCTCTCCTCCGCCGCCGCTCCCCCGACTCCGGCGAGCCCCCTTCCCCCCACC 60
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      ------------------------------------------------------------
                                                                                   

consensus_10673#0      CATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGATCTCCC 120
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      ------------------------------------------------------------
                                                                                   

consensus_10673#0      GGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCTCAGGAG 180
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      ------------------------------------------------------------
                                                                                   

consensus_10673#0      TACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCAAACGCC 240
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      ------------------------------------------------------------
                                                                                   

consensus_10673#0      ATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAATCCTGAT 300
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      ------------------------------------------------------------
                                                                                   

consensus_10673#0      TGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGTCCAATA 360
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      ------------------------------------------------------------
                                                                                   

consensus_10673#0      TGTTGGGAATCCTTCAACCTTGTTGAGAATGTTCCCTATGTCTTGTGGTGCGGTCATACA 420
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      ------------------------------------------------------------
                                                                                   

consensus_10673#0      ATGTGCAAGAATTGCATCTTGGGTCTTCAATGGGCTGTCGTCAAGTTCCCAACCCTTCCT 480
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      ------------------------------------------------------------
                                                                                   

consensus_10673#0      ATACAACTGCCTCTCTTCATCTCATGTCCATGGTGTAACCTGTTATCTTTCCGGCTAGTT 540
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      --------------------------------TCCCCCGACTCCGGCGAGCCCCCTTCCC 28
                                                                                   

consensus_10673#0      TACAAGGGAAACCTCAAGTTCCCACGCAAGAACTATTTTCTGCTATGGATGGTTGAGAGC 600
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      CCCACCCATCGGCGCGGAGGACGTTGCCGGGATGAGCGTCTCCCCTTCAACCGGACGCGA 88
                                                                                   

consensus_10673#0      ATGAATGGCGAGAGAGCAAAGTTCCATTCCCCTAGTCATGAAGAGCGCCATTCTTTATGC 660
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      TCTCCCGGGGCGCTCCCGTATGCCCTTGCGCTGCTAGAGATCCGGGCTCTTCTCGGATCT 148
                                                                                   

consensus_10673#0      CCTTCTGGTGGTGGCCCAAGTTCCAGTCAACACCATCGAAGACCTGCTCCACGAACAGAA 720
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      CAGGAGTACAAGATATAGTGTACCAGCTCTCTCTCATTCAACATGTGGAGTTTTGCGTCA 208
                                                                                   

consensus_10673#0      AGCGCCAGTGGCAGAGA-AAGGAGTGTTGCTGGCAACGTTTTCAATACTTACAGCATCAG 779
consensus_10673#2      ----CCAGAGGCCGAGCCAAGGGGTGTTGCTGGCAACGTTTTGAATACTTACAGCATCAG 56
consensus_10673#1      AACGCCATAGCTGGAAGCATAAGGAAAAAAGCACAGCCCTCAAAATGCAGTCAATCCAAT 268
                           ***  *   **   *    *         ** *  *   *** *   **     * 

consensus_10673#0      TGCATCTCTCCAAAAGATAATGTTGTCTTTTGTTCAGAT------GACAGCC--AAGTTT 831
consensus_10673#2      GGCATTTTTCCAAAAGATAATGTTGTTTTTTGTTCAGAT------GACAGCC--AAGTTT 108
consensus_10673#1      CCTGATTGCTCTGATGATGATGTTTCTTCATGTGCAAGTAGAGAGGAAGGCCTTGAATGT 328
                             *   *  * *** *****   *  *** **  *      **  ***   * * *

consensus_10673#0      CCA-----CTCGTGATAATTT--TCCTTCTGATAGTTCTATATGCTGTCCCTGCAAGCGT 884
consensus_10673#2      CCC-----CTCGGGATAATTT--TCCTTTTGATAGTTTTATATGCGGTCCCTGCAAGGGT 161
consensus_10673#1      CCAATATGTTGGGAATCCTTCAACCTTGTTGAGAATGTTCCCTATGTCTTGTGGTGCGGT 388
                       **       * *  **  **    * *  *** * *  *   *        **     **

consensus_10673#0      AGCA----GTTCTAGTATTGTAT-----GTCCTTGTTACAGTTTTGTTTGCACTGCCGTC 935
consensus_10673#2      AGCA----GTTTTAGTATTGTAT-----GTCCCTGTTACAGTTTTGTTTGCCCCCCCGTC 212
consensus_10673#1      CATACAATGTGCAAGAATTGCATCTTGGGTCTTCAATGGGCTGTCGTCAAGTTCCCAACC 448
                          *    **   ** **** **     ***     *    * * **        *   *

consensus_10673#0      CTTTTTGATCCTCTACTTTGCTTATCCCAGTTTGGATTGGCTCGTTAGAGAGATCTTCAA 995
consensus_10673#2      CTTTTTGATCCTTTACTTTGCTTATCCCCGTTTGGATTGGCTCGTTAAAGAGATTTTCAA 272
consensus_10673#1      CTTCCTATACAACTGCCTCTCTTCATCTCATGTGCATGGTGTAACCTGTTATCTGTCCGG 508
                       ***  *   *   * * *  ***   *   * ** ** *  *        *  * * *  

consensus_10673#0      TTGAGTTATATTGTA---CTCCATGTCATTACAGTTTATAACTCAGCAGCAGAAAATTTA 1052
consensus_10673#2      TTGAGTTATATTGTA---CTCCCGGTCCTTCCAGTTTATAACTCAGCAGCAGAAAATTTT 329
consensus_10673#1      CTAGTTTACAAGGGGAACCTCAAGTTCCACGCAGGACCTATTTCTGTA--TGATGGTTGA 566
                        *   *** *  *     ***    **    ***    **  ** * *   **   **  

consensus_10673#0      GCATTTGCAATCTCATGTGCTCTGGGGGAGGATGTCAAGTGTGATTTCTTATCCATTCGA 1112
consensus_10673#2      GCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------- 370
consensus_10673#1      AACATGATGGCACAGACAAAGTCCATTCCCTAGCATGAGAGCCCATCTTATGCCCTTTGG 626
                                                      *     *                      

consensus_10673#0      TTGAGGCCTTCAGGGACAGTAGTTGTAAGATGGAACTCTAATTATTGCATTGATATACAT 1172
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      GTGGCCAAGTCCGTCACACCTTGAAAACTGTCACGACTGAAGGCTGTGGAAAAAGGATGT 686
                                                                                   

consensus_10673#0      GAATCACTCAGGTTTTACTGTAAAAAAAA------------------------------- 1201
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      TCTGCACGGTCAATCTACGGTCAGGATTTCAAGAAAGGTGGTTTTCAAACACCATTACTC 746
                                                                                   

consensus_10673#0      ------------------------------------------------------------
consensus_10673#2      ------------------------------------------------------------
consensus_10673#1      GGAATTCCTGATACTAGGTGCTGACGCATTAAATGAGGCGTCTGTGGTCGCGCTTTGCCT 806
                                                                                   

consensus_10673#0      --------------------------------------------------
consensus_10673#2      --------------------------------------------------
consensus_10673#1      CTTTCCCGATCGGAGTGATATGGCATTGCGAGGAGGACGGCTATGAGAAG 856