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Oryza sativa
cluster # 10680 cluster # 10680       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10680#0 length = 962 sequences # 6  
consensus_10680#1 length = 651 sequences # 1  
consensus_10680#2 length = 539 sequences # 1  

consensusID : consensus_10680#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 962
fasta sequence
                              [AGTAGTGACACTCACTCACACGATAGCAAGAAGCTAGCTTGGTTGCTCACATTGAGCTCAACAATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCACACTTGCGGCGGTTGCGAGGGCGGCCCGCCCAGAAGAAACCAGGCCGGGCTTGGCCCGCCGCGGGTCAGCATCCTCACCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCAGTGCGGGTGGTGG-ACCCGGTGGA-CCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTCATGGACGATCCGCT-GACGGA--GGGG-CCCGAGCCCGAGT-CCAAGCCCATGGG-CCGGGCCCAGGGGCTGTACAT-GGGCTCAGACCA-GGCCAAGCTGGG-CTTCCTCC-AGGCAA-TGAACCTGGTGTTCACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGCTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTCTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACACAAAGCGTTTGCATTTCTCTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAATAATGGCCCTTGTTGAAAGTGATTCACTCAAGAACACAGGGGAGTTTAGTTGCTGCAGTGTTGATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTGGTTTAGTCTTTCAGTAATAACTTTCTTGGTTGCAGTAACACACTATACCGAAGAACACAGACAACTTTTAGTTGCAGGCTTAACAAACTTCTGTCATATAATCCTGATTTCTTAAACCAGTGGGAGCTTTGTT]

[+] EMBL AK060077             [AGTAGTGACACTCACTCACACGATAGCAAGAAGCTAGCTTGGTTGCTCACATTGAGCTCAACAATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCACACTTGCGGCGGTTGCGAGGGCGGCCCGCCCAGAAGAAACCAGGCCGGGCTTGGCCCGCCGCGGGTCAGCATCCTCACCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCAGTGCGGGTGGTGG ACCCGGTGGA CCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTCATGGACGATCCGCT GACGGA  GGGG CCCGAGCCCGAGT CCAAGCCCATGGG CCGGGCCCAGGGGCTGTACAT GGGCTCAGACCA GGCCAAGCTGGG CTTCCTCC AGGCAA TGAACCTGGTGTTCACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGCTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTCTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACACAAAGCGTTTGCATTTCTCTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAATAATGGCCCTTGTTGAAAGTGATTCACTCAAGAACACAGGGGAGTTTAGTTGCTGCAGTGTTGATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTGGTTTAGTCTTTCAGTAATAACTTTCTTGGTTGCAGTAACACACTATACCGAAGAACACAGACAACTTTTAGTTGCAGGCTTAACAAACTTCTGTCATATAATCCTGATTTCTTAAACCAGTGGGAGCTTTGTT]
[+] EMBL OSC8201              [          CTCACTCACACGATAGCAAGAAGCTAGCTTGGTTGCTCACATTGAGCTCAACAATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCACACTTGCGGCGGTTGCGAGGGCGGCCCGCCCAGAAGAAACCAGGCCGGGCTTGGCCCGCCGCGGGTCAGCATCCTCACCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCAGTGCGGGTGGTGG ACCCGGTGGA CCCGTCATNGCGGTCCTTCTTTGGGATGATCAACGTCATGGACGATCCGCTNGACGGAGGGGGG CCCGAGCCCGAGT CCAAGCCNATGGGCCCGGGCCCAGNGGTTGTACATGGGGCTCAGAACAGGGCAAAGTTGGGNTTTTCTCCAAGGGAATTGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF278089             [           TCACTCACACGATAGCAAGAAGCTAGCTTGGTTGCTCACATTGAGCTCAACAATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCACACTTGCGGCGGTTGCGAGGGCGGCCCGCCCAGAAGAAACCAGGCCGGGCTTGGCCCGCCGCGGGTCAGCATCCTCACCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCAGTGCGGGTGGTGG ACCCGGTGGA CCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTCATGGACGATCCGCT AACGGA  GGGG CCCGAGCCCGAGT CCAAGCCCATGGG CCGGGCCCAGGGGCTGTACAT GGGCTCAGACCA GGCCAAGCTGGG CTTCCTCC AGGCAA TGAACCTGGTGTTCACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGCTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTCTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACACAAAGCGTTTGCATTTCTCTG                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSS10616A            [                                   AGCTTGGTTGCTCACATTGAGCTCAACAATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCACACTTGCGGCGGTTGCGAGGGCGGCCCGCCCAGAAGAAACCAGGCCGGGCTTGG CCGCCGCGGGTCAGCATCCTCACCGACGACTCACCTGCACTTNTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCAGTNCGGGTGGTGG ACCCGGTGGA CCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTCATGGACGATCCGCT GACGGA  GGGG CCCGAGCCCGAGT CCAAGCCCATGGG CCGGGCCCAGGGGTTGTACAT GGGCTCAGACCA GGCCAAGNTGGG  TTTCTCC AGG AA TTAACCTGGTGTTaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA756453             [                                                    TGAGCTCAACAATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCACACTTGCGGCGGTTGCGAGGGCGGCCCGCCCAGAAGAAACCAGGCCGGGCTTGGCCCGCCGCGGGTCAGCATCCTCACCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCAGTGCGGGTGGTGG ACCCGGTGGA CCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTCATGGACGATCCGCT GACGGA  GGGG CCCGAGCCCGAGT CCAAGCCCATGGG CCGGGCCCAGGGGCTGTACAT GGGCTCAGACCA GGCCAAGCTGGG CTTCCTCC AGGCAA TGAACCTGGTGTTCACCGACGGCACCTACNACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGCTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCTTTGTCGAGTACAACGTCTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACACAAA                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU085990             [                                                                                                                                                                                                                                            gnCAGTGCGGTTGTTGGAACCCGGTGGACCCCGTCNTCGCGGTCCTTCTTTGGGATGATCAA NTCATGGACGATCCGCT GACGGA  GGGGCCCCGAGCCCGANTCCCAAGCCCATGGG CCGGGCCCAGGGGCTGTACAT GGGCTCAGACCA GGCCAAGCTGGG CTTCCTCC AGGCAA TGAACTTGGTGTTCACCGACGGCA CTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAA TG CCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCCGTTCGCCCGC GCTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTCTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACACAAAGCGTTTGCATTTCTCTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAATAATGGCCCTTGTTGAAAGTGATTCACTCAAGAACACAGGGGAGTTTAGTTGCTGCAGTGTTGATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTGGTTTAaaaaaa                                                                                                                          ]


>consensus_10680#0 AGTAGTGACACTCACTCACACGATAGCAAGAAGCTAGCTTGGTTGCTCACATTGAGCTCA ACAATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCACACTTGCGGCGGTTGCG AGGGCGGCCCGCCCAGAAGAAACCAGGCCGGGCTTGGCCCGCCGCGGGTCAGCATCCTCA CCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCA GTGCGGGTGGTGGACCCGGTGGACCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTC ATGGACGATCCGCTGACGGAGGGGCCCGAGCCCGAGTCCAAGCCCATGGGCCGGGCCCAG GGGCTGTACATGGGCTCAGACCAGGCCAAGCTGGGCTTCCTCCAGGCAATGAACCTGGTG TTCACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTC GACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGC TACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTAC AACGTCTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACACAAAGCGTTT GCATTTCTCTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAATAATGGCCCT TGTTGAAAGTGATTCACTCAAGAACACAGGGGAGTTTAGTTGCTGCAGTGTTGATCTTGA TACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTGGTTTAGTCTTT CAGTAATAACTTTCTTGGTTGCAGTAACACACTATACCGAAGAACACAGACAACTTTTAG TTGCAGGCTTAACAAACTTCTGTCATATAATCCTGATTTCTTAAACCAGTGGGAGCTTTG TT



consensusID : consensus_10680#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 651
fasta sequence
                              [GGGGGTGTCCCCCTGATTTCCCTCCNGGATGGTTCCCANAAAGCTGCCCCCATTGGGCCGGGCCCCATGGGCTGTACATGGGCTTCAGACCAGGCCAAGCTGGGCGTTCCTCCAGCCAATGGACCTGTTGTTCATCCGACGCACNTTACTTCTGGCAGCGTGGTCACCGTGCTCGCCGCACTGCCCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGCTGGCACCGGCGCCTTCCGCGTTCGCCCGCGGCTACGCCCAGGCCAGGACGCACACCCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTCTACGTCATGCACTGATCACACAAGATGGAGACGATGCTTCACACAAAGCGTTTGCATTTCTCTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAATAATGGCCCTTGTTGAAAGTGATTCACTCAAGAACACCAGGGGAGTTTAGTTGCTGCAGTGTTCGATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTGGTTTAGTCTTTCAGTAATAACTTTCTTGGTTCAGTAACACACTATACCGAAGAACACAGACACTTTTAGTTGCAGGCTTAACAACTTCTNNTCATATAAAAAAAAAAA]

[+] EMBL BI806998             [GGGGGTGTCCCCCTGATTTCCCTCCNGGATGGTTCCCANAAAGCTGCCCCCATTGGGCCGGGCCCCATGGGCTGTACATGGGCTTCAGACCAGGCCAAGCTGGGCGTTCCTCCAGCCAATGGACCTGTTGTTCATCCGACGCACNTTACTTCTGGCAGCGTGGTCACCGTGCTCGCCGCACTGCCCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGCTGGCACCGGCGCCTTCCGCGTTCGCCCGCGGCTACGCCCAGGCCAGGACGCACACCCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTCTACGTCATGCACTGATCACACAAGATGGAGACGATGCTTCACACAAAGCGTTTGCATTTCTCTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAATAATGGCCCTTGTTGAAAGTGATTCACTCAAGAACACCAGGGGAGTTTAGTTGCTGCAGTGTTCGATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTGGTTTAGTCTTTCAGTAATAACTTTCTTGGTTCAGTAACACACTATACCGAAGAACACAGACACTTTTAGTTGCAGGCTTAACAACTTCTNNTCATATAAAAAAAAAAA]


>consensus_10680#1 GGGGGTGTCCCCCTGATTTCCCTCCNGGATGGTTCCCANAAAGCTGCCCCCATTGGGCCG GGCCCCATGGGCTGTACATGGGCTTCAGACCAGGCCAAGCTGGGCGTTCCTCCAGCCAAT GGACCTGTTGTTCATCCGACGCACNTTACTTCTGGCAGCGTGGTCACCGTGCTCGCCGCA CTGCCCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGCTGGCACCGGCGCCTTCCGCG TTCGCCCGCGGCTACGCCCAGGCCAGGACGCACACCCCTGGACCTCAAGACCGGCGACGC CATTGTCGAGTACAACGTCTACGTCATGCACTGATCACACAAGATGGAGACGATGCTTCA CACAAAGCGTTTGCATTTCTCTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAA AATAATGGCCCTTGTTGAAAGTGATTCACTCAAGAACACCAGGGGAGTTTAGTTGCTGCA GTGTTCGATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTC TTGGTTTAGTCTTTCAGTAATAACTTTCTTGGTTCAGTAACACACTATACCGAAGAACAC AGACACTTTTAGTTGCAGGCTTAACAACTTCTNNTCATATAAAAAAAAAAA



consensusID : consensus_10680#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 539
fasta sequence
                              [CCGCTAACGGAGGGGCCCGAGCCCGAGTCCAAGCCCATGGGCCGGGCCCAGGGGGCTGTACATGGGTCAGACCAGGCCAAGCTGGGCTTCCTCCAGGCAATGAACCTGGTGTTCACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTTGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGTTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTTTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACACAAAGCGTTTGCATTTCTTTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAATAATGGCCCTTGTTGAAAGTGATTCACTCAAGAACACAGGGGAGTTTAGTTGCTGCAGTGTTGATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTGGTTTAAAAAAAAAAAAAAA]

[-] EMBL CF278090             [CCGCTAACGGAGGGGCCCGAGCCCGAGTCCAAGCCCATGGGCCGGGCCCAGGGGGCTGTACATGGGTCAGACCAGGCCAAGCTGGGCTTCCTCCAGGCAATGAACCTGGTGTTCACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTTGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGTTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTTTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACACAAAGCGTTTGCATTTCTTTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAATAATGGCCCTTGTTGAAAGTGATTCACTCAAGAACACAGGGGAGTTTAGTTGCTGCAGTGTTGATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTGGTTTAAAAAAAAAAAAAAA]


>consensus_10680#2 CCGCTAACGGAGGGGCCCGAGCCCGAGTCCAAGCCCATGGGCCGGGCCCAGGGGGCTGTA CATGGGTCAGACCAGGCCAAGCTGGGCTTCCTCCAGGCAATGAACCTGGTGTTCACCGAC GGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTTGACGACGTC CGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGTTACGCCCAG GCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTTTAC GTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACACAAAGCGTTTGCATTTCTT TGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAATAATGGCCCTTGTTGAAAG TGATTCACTCAAGAACACAGGGGAGTTTAGTTGCTGCAGTGTTGATCTTGATACAAAAAA AATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTGGTTTAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10680#0      AGTAGTGACACTCACTCACACGATAGCAAGAAGCTAGCTTGGTTGCTCACATTGAGCTCA 60
consensus_10680#2      ------------------------------------------------------------
consensus_10680#1      ------------------------------------------------------------
                                                                                   

consensus_10680#0      ACAATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCACACTTGCGGCGGTTGCG 120
consensus_10680#2      ------------------------------------------------------------
consensus_10680#1      ------------------------------------------------------------
                                                                                   

consensus_10680#0      AGGGCGGCCCGCCCAGAAGAAACCAGGCCGGGCTTGGCCCGCCGCGGGTCAGCATCCTCA 180
consensus_10680#2      ------------------------------------------------------------
consensus_10680#1      ------------------------------------------------------------
                                                                                   

consensus_10680#0      CCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCA 240
consensus_10680#2      ------------------------------------------------------------
consensus_10680#1      ------------------------------------------------------------
                                                                                   

consensus_10680#0      GTGCGGGTGGTGGACCCGGTGGACCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTC 300
consensus_10680#2      ------------------------------------------------------------
consensus_10680#1      ---------------------------------------------------GGGGGTGTC 9
                                                                                   

consensus_10680#0      ATGGACGATCCGCTGACGGAGGGGCCCGAGCCCGAGTCCAAGCCCAT-GGGCCGGGCCCA 359
consensus_10680#2      ---------CCGCTAACGGAGGGGCCCGAGCCCGAGTCCAAGCCCAT-GGGCCGGGCCCA 50
consensus_10680#1      CCCCTGATTTCCCTCCNGGATGGTTCCCAN---AAAGCTGCCCCCATTGGGCCGGGCCCC 66
                                 * **   *** **  ** *     *  *    ***** *********** 

consensus_10680#0      GGGG-CTGTACATGGGC-TCAGACCAGGCCAAGCTGGGC-TTCCTCCAGGCAATGAACCT 416
consensus_10680#2      GGGGGCTGTACATGGG--TCAGACCAGGCCAAGCTGGGC-TTCCTCCAGGCAATGAACCT 107
consensus_10680#1      ATGGGCTGTACATGGGCTTCAGACCAGGCCAAGCTGGGCGTTCCTCCAGCCAATGGACCT 126
                         ** ***********  ********************* ********* ***** ****

consensus_10680#0      GGTGTTCA-CCGACGGCACCTACAAC-GGCAGCGTGGTCACCGTGCTCGGCCGCAACTGC 474
consensus_10680#2      GGTGTTCA-CCGACGGCACCTACAAC-GGCAGCGTGGTCACCGTGCTCGGCCGCAACTGC 165
consensus_10680#1      GTTGTTCATCCGACGCACNTTACTTCTGGCAGCGTGGTCACCGTGCTCG-CCGCA-CTGC 184
                       * ****** ******     ***  * ********************** ***** ****

consensus_10680#0      CCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGC-GGCACCGGCGCCTTCCGC-TTCG 532
consensus_10680#2      CCCTTTGACGACGTCCGGGAGATGCCGGTGATCGGC-GGCACCGGCGCCTTCCGC-TTCG 223
consensus_10680#1      CCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGCTGGCACCGGCGCCTTCCGCGTTCG 244
                       ***** ****************************** ****************** ****

consensus_10680#0      CCCGCGGCTACGCCCAGGCCAGGACGCACACCC-TGGACCTCAAGACCGGCGACGCCATT 591
consensus_10680#2      CCCGCGGTTACGCCCAGGCCAGGACGCACACCC-TGGACCTCAAGACCGGCGACGCCATT 282
consensus_10680#1      CCCGCGGCTACGCCCAGGCCAGGACGCACACCCCTGGACCTCAAGACCGGCGACGCCATT 304
                       ******* ************************* **************************

consensus_10680#0      GTCGAGTACAACGTCTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACAC 651
consensus_10680#2      GTCGAGTACAACGTTTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACAC 342
consensus_10680#1      GTCGAGTACAACGTCTACGTCATGCACTGATCACA-CAAGATGGAGACGATGCTTCACAC 363
                       ************** ******************** *********** ************

consensus_10680#0      AAAGCGTTTGCATTTCTCTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAAT 711
consensus_10680#2      AAAGCGTTTGCATTTCTTTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAAT 402
consensus_10680#1      AAAGCGTTTGCATTTCTCTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAAT 423
                       ***************** ******************************************

consensus_10680#0      AATGGCCCTTGTTGAAAGTGATTCACTCAAGAACAC-AGGGGAGTTTAGTTGCTGCAGTG 770
consensus_10680#2      AATGGCCCTTGTTGAAAGTGATTCACTCAAGAACAC-AGGGGAGTTTAGTTGCTGCAGTG 461
consensus_10680#1      AATGGCCCTTGTTGAAAGTGATTCACTCAAGAACACCAGGGGAGTTTAGTTGCTGCAGTG 483
                       ************************************ ***********************

consensus_10680#0      TT-GATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTG 829
consensus_10680#2      TT-GATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTG 520
consensus_10680#1      TTCGATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTG 543
                       ** *********************************************************

consensus_10680#0      GTTTAGTCTTTCAGTAATAACTTTCTTGGTTGCAGTAACACACTATACCGAAGAACACAG 889
consensus_10680#2      GTTTAAAAAAAAAAAAAAA----------------------------------------- 539
consensus_10680#1      GTTTAGTCTTTCAGTAATAACTTTCTTGGTT-CAGTAACACACTATACCGAAGAACACAG 602
                       *****       *  ** *                                         

consensus_10680#0      ACAACTTTTAGTTGCAGGCTTAACAAACTTCTGTCATATAATCCTGATTTCTTAAACCAG 949
consensus_10680#2      ------------------------------------------------------------
consensus_10680#1      ACA-CTTTTAGTTGCAGGCTTAACAACTTCTNNTCATATAAAAAAAAAAA---------- 651
                                                                                   

consensus_10680#0      TGGGAGCTTTGTT 962
consensus_10680#2      -------------
consensus_10680#1      -------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)