These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10681#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 677 fasta sequence [CTTCTTCCTCGTTCACAGCAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG-TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC-TCACACTGGC-TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGT-TCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTC-TGAATCTCCTACGTACTGTCTGTTTTCCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGACGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATACATTTGTTGTTTCTTGTCAAGACGAATCAAATGTTCTGATTTTCTATATGTGTGTAACTATTGAGGCTTTTTTTTAAATCA] [+] EMBL AK120859 [CTTCTTCCTCGTTCACAGCAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGT TCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTC TGAATCTCCTACGTACTGTCTGTTTTCCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGACGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATACATTTGTTGTTTCTTGTCAAGACGAATCAAATGTTCTGATTTTCTATATGTGTGTAACTATTGAGGCTTTTTTTTAAATCA] [+] EMBL OSC19131 [ AGCAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGNGACGCTNTGGCTGACTGGGGTGGCGANCTCGATCGTGTACAACTGGTCGAGGCCCGGCATGAAGACCAGNG TCAAGNTCATCCACGNCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTNGCTCTGCACTTGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAA NAGT TTATCACACCTGAGATCAANCCACAAA ] [+] EMBL C97312 [ CAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAnggtttc ] [+] EMBL C27791 [ AGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAANATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGANG TT TCATCACACCTTAGAGCANCCCACAAAAAG ATAG GGACGTTGTGTACTTA ] [+] EMBL D43130 [ CACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCNTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGCTTGCATTGGCTG ] [+] EMBL CF306934 [ CAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGT TCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTC TGAATCTCCTACGTACTGTCTGTTTTCCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGACGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATACATTTGTTGTTTCTTGTCAAGACGAATCAAATGTTCTGATTTTCTAaaaaaaaaa ] [+] EMBL C28034 [ GGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGA CACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGG CAGGTTCAGGATCAAGAGTTCATCAGTATGCGA NNGTNTCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGNCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTCTTGAATCTCCTACGTACTGTCTGTTTT CCTTCTCTGCCTG TTTCTGTATAAG ] [+] EMBL C97313 [ tGCTGACTGGGTTGCCAACCTCGATCGCGTACAATTGGTCGAGCCCCGGCATGAAGACCAGCGTTCAAGATCACCCACGCCAGNTTGCATGCTCAGGCCCTTCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGT TCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTC TGAATCTCCTACGTACTGTCTGTTTTCCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGACGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||