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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10687#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3215 fasta sequence
[TCTTCTTCTTCTTCTTTCTTTCTATTCCTTTCCTTCCTCCTCACTTCTTCCTTCTTCTTCCTCCTCCACTCTCCTCTCCCCTCCATCCAACGCTGCTTCGTCTTTGGAGTTGGAGTTGGAGTTGGACACCACCCACCGGCACCTAGCTAGGCTTCTCTACCATCATCTGTGATCTTTCTTGTCGAGAGAGAGAGCAAGCAGTTGCATGCCTGATTGGTCAGCGAGTGAGCTGCTGGTGGCGGTGGCGGCCGCGCTTAGTCAGCGGTGGTGACTGTCCCGGCGATGTCGGGAGCTGACCGGCTAAGCATCCGCGCCGCGGCGCTGGCGCTCGACGATGCTGCCGCCGGGAGGGACAAGCCGGACACCAAGCGTGACGTCTTCGCGGATCTTGGCTCGCCGGTGTCGCCGCTGCGGCTGCGGCCTGGCGGCGCCGCGGCCACGCCGTCGTCGTCCTCCTCGTCCGCTGGCTCGGCCAAGTCGCCCGCGCTGTGCAATGCTGGGGCGGGGGTGGGTAGGGGAGGAGGAGGAGGCCGGGGGAGCCACTCAGGCGAGCTGGTGGCGGAGGGGAACCCGCCGCGGCCGCCAGGGCACCGCCGCTCCGGATCTGGGCCTCTGATATTCTCCGGCGGGAGCAGCAGCGCCGGGAGCGGAGGAGGAGGAGGAGGCTGCGGCGGCGGGAGCACGGCGAGCTCGCCGCTGACCAATGCGCTGCCTACCGGTAACATCTGCCCGTCCGGCCGCGTCGCGAGCGCGGCGCCTGCGCCGCCCCGACGCGCCCGTCCCGACGTGCTTGGATCCGGCACGGGGCACTATGGCCACGGCAGCATCATGAGAGGCGGCGGCGGCATGACTCCCCCTAGAAGCAGCATTGACGCCAGTCCGTACCACGGCAGCTACTCGAGGTCGCCGGCGCCGCAGGGCAGCAGCGGGGGTCTCCAGGAGGTGACCAGGGCCGGGAACGAGTGGTACAAGAAGGGCCATTACGGCGAGGCGCTGCGGCACTACGACCAGGCGGTGGCGCTGTGCCCGGACAGCGCCGCGTGCCGCAGCAACCGCGCCGCCGCGCTCATCGGCCTCGGCCGCCTCGCCGAAGCGCTCCGCGAGTGCGAGGAGGCCATCCGCCGTGACCCGGCGAGCGGCCGCGCGCACAGCCGCCTCGCCGCGCTCTGCCTCCGGTTTGGAATGGTTGAGAGGGCAAGGGAGCACTTCATGTTAGCTGGGCAAGTAAATCAGTCAGACCCAGCTGAGTTTCAGAGGCTCCAAGAGGTGGAAAGACATCTGGGGCGATGCATGGATGCGAGGAAAACTGGAGACTGGAAGAGTGCGCTAAGGGAAGCAGATGCTGCCATTGCCAATGGAGCGGATTCCTCTCAGTTGCTTCTTGCCTTACGGTCTGAAGCACTTCTCCGTCTCAACAAACTAGAGGAGGCCGATTCGACTATTACAAGCTTGTCAAAACTGGACATTGCATCGCTATCTTCAATGTCAACTAAACTATCGGGCATGGTTGCTGATTCATATGTTCATGTTGTCGAAGCCCAGGTCAACATGGCTTTTGGAAGGTTTGACATAGCTGTTACCATGGCTGAGAAGGCTAGGGTTATTGATCCTGGAAATACAGAAGTTGGAAGGATTACAAACAACATAAGATTAGTTGCACAAGCTCGAGGACAGGGAAATGAGCTTTTTAAGGCAGGCAAGTTTGCTGAGGCGTCCTTAGCTTATGGTGAAGGGCTCAAATATGAGCCCTCAAATCCAGTACTGTACTGCAATCGAGCAGCTTGTTGGTCAAAGTTAGGTCGGTGGATGAAAGCTGTTGAAGATTGCAATGAGGCCCTCAAAGTCCATCCTGGTTACACGAAGGCTCTCTTAAGACGTGCAGCATCCTATGCAAAGGTAAGCGATACATGTATCATTGTATTTCTGATTATTTGCGCATTGTGGTGTTGATATCTCCCTGTTAACACTCAATTAGCTTGAGCGCTGGGCCGATTGTGTGCGGGACTATGAGGTGCTACGCAAGGAGCTTCCTAACGACACGGAGGTTGCGGAAGCATTGTTCCATGCGCAAGTTGCACTGAAGACAGCACGTGGGGAGGAGGTAGCAAATATGAAGTTTGGAGGAGAGGTTGAGACAATTACCAGCATAGAGCAACTCCGAGATGCTATACATTCACCTGGAGTATCTGTTGTTTACTTCATGGCAACGATGAATCAGCAGTGTCAACAGATAACCCCATCCGTGGACTCTCTTTGCTCCGAGTGCCCTTCAGTGAATTTTCTGAAGGTAAATGTTGATGAGAGTCCTATGGTAGCAAGAGCGGAGAATGTGCGCATAGTCCCGAGCTTCAAGATATACAAGGACGGTGCAAGAATGAAGGAGATGATCTGCCCCAGCTTACACATCTTGCGCTATTCAGTCAAGCATTATGCTGTCTCCAGTTCTTGAGGAGGTCTTACTAGTGGCACTCATATTTTTTGATGCATATAATTCCCTGTCACCTACCAACATTTTACCAACAAACTATTCTCTATAATCAGCCTCCACAGCATTTCTCCAGCTGCATAGTTACTCTCCGCTGAGCATAATGAGCTAAAGCTTGATTCACGAAGTAGTTTCCTATTGGCTATCTTTCCTTTGTTACCTGTTGCATCTATTTTCTGATCCTTCATCCTTCCAACCTTATTCTTGGATCATTTAGGTTCCTTCATTTGCTTATTCCCACCCATCCATCGTTCGGCCAACCTGCATTGTGCAATTCTTTCATCTCTTACATTCTGTTCTGCCACCTCATAATGCATTTGACACATTTTTGCTGCAGCCCATAGGCCACTCCTCAAGAAAAAGAATGCTTCTGTTCTGACATTGTTTAGATGCAGGCATGCTTGTTGTTAGAGAAAGAAATAAGAGGCTGCAGACAGAATTGGTTTTTTTCATTACATGTACATATACCATATAGCAAAAACATGAAACCAATTGGAAGATTTGATTCTATGGAGGGATGGTGGTGCCACTTTGCAGTGGACAGAAGTACAGGGCTAGTTGCCAATTGTAGAGAGAAGATAGATGAAGAAAGACAATGTAATTGGTAGGGAGATAATGAGGGAGGTGGTTGATGTCTCTTTGCATATGCCTCTGCTGGGTCTGTGGTGCTGATACATATATACTACTTGCTGACATTTTTATGAATAAAAATAGCCCAACATTCTTTCTT]
[+] EMBL AK120811 [TCTTCTTCTTCTTCTTTCTTTCTATTCCTTTCCTTCCTCCTCACTTCTTCCTTCTTCTTCCTCCTCCACTCTCCTCTCCCCTCCATCCAACGCTGCTTCGTCTTTGGAGTTGGAGTTGGAGTTGGACACCACCCACCGGCACCTAGCTAGGCTTCTCTACCATCATCTGTGATCTTTCTTGTCGAGAGAGAGAGCAAGCAGTTGCATGCCTGATTGGTCAGCGAGTGAGCTGCTGGTGGCGGTGGCGGCCGCGCTTAGTCAGCGGTGGTGACTGTCCCGGCGATGTCGGGAGCTGACCGGCTAAGCATCCGCGCCGCGGCGCTGGCGCTCGACGATGCTGCCGCCGGGAGGGACAAGCCGGACACCAAGCGTGACGTCTTCGCGGATCTTGGCTCGCCGGTGTCGCCGCTGCGGCTGCGGCCTGGCGGCGCCGCGGCCACGCCGTCGTCGTCCTCCTCGTCCGCTGGCTCGGCCAAGTCGCCCGCGCTGTGCAATGCTGGGGCGGGGGTGGGTAGGGGAGGAGGAGGAGGCCGGGGGAGCCACTCAGGCGAGCTGGTGGCGGAGGGGAACCCGCCGCGGCCGCCAGGGCACCGCCGCTCCGGATCTGGGCCTCTGATATTCTCCGGCGGGAGCAGCAGCGCCGGGAGCGGAGGAGGAGGAGGAGGCTGCGGCGGCGGGAGCACGGCGAGCTCGCCGCTGACCAATGCGCTGCCTACCGGTAACATCTGCCCGTCCGGCCGCGTCGCGAGCGCGGCGCCTGCGCCGCCCCGACGCGCCCGTCCCGACGTGCTTGGATCCGGCACGGGGCACTATGGCCACGGCAGCATCATGAGAGGCGGCGGCGGCATGACTCCCCCTAGAAGCAGCATTGACGCCAGTCCGTACCACGGCAGCTACTCGAGGTCGCCGGCGCCGCAGGGCAGCAGCGGGGGTCTCCAGGAGGTGACCAGGGCCGGGAACGAGTGGTACAAGAGGGGCCATTACGGCGAGGCGCTGCGGCACTACGACCAGGCGGTGGCGCTGTGCCCGGACAGCGCCGCGTGCCGCAGCAGCCGCGCCGCCGCGCTCATCGGCCTCGGCCGCCTCGCCGAAGCGCTCCGCGAGTGCGAGGAGGCCATCCGCCGTGACCCGGCGAGCGGCCGCGCGCACAGCCGCCTCGCCGCGCTCTGCCTCCGGTTTGGAATGGTTGAGAGGGCAAGGGAGCGCTTCATGTTAGCTGGGCAAGTAAATCAGTCAGACCCAGCTGAGTTTCAGAGGCTCCAAGAGGTGGAAAGACATCTGGGGCGATGCATGGATGCGAGGAAAACTGGAGACTGGAAGAGTGCGCTAAGGGAAGCAGATGCTGCCATTGCCAATGGAGCGGATTCCTCTCAGTTGCTTCTTGCCTTACGGTCTGAAGCACTTCTCCGTCTCAACAAACTAGAGGAGGCCGATTCGACTATTACAAGCTTGTCAAAACTGGACATTGCATCGCTATCTTCAATGTCAACTAAACTATCGGGCATGGTTGCTGATTCATATGTTCATGTTGTCGAAGCCCAGGTCAACATGGCTTTTGGAAGGTTTGACATAGCTGTTACCATGGCTGAGAAGGCTAGGGTTATTGATCCTGGAAATACAGAAGTTGGAAGGATTACAAACAACATAAGATTAGTTGCACAAGCTCGAGGACAGGGAAATGAGCTTTTTAAGGCAGGCAAGTTTGCTGAGGCGTCCTTAGCTTATGGTGAAGGGCTCAAATATGAGCCCTCAAATCCAGTACTGTACTGCAATCGAGCAGCTTGTTGGTCAAAGTTAGGTCGGTGGATGAAAGCTGTTGAAGATTGCAATGAGGCCCTCAAAGTCCATCCTGGTTACACGAAGGCTCTCTTAAGACGTGCAGCATCCTATGCAAAGGTAAGCGATACATGTATCATTGTATTTCTGATTATTTGCGCATTGTGGTGTTGATATCTCCCTGTTAACACTCAATTAGCTTGAGCGCTGGGCCGATTGTGTGCGGGACTATGAGGTGCTACGCAAGGAGCTTCCTAACGACACGGAGGTTGCGGAAGCATTGTTCCATGCGCAAGTTGCACTGAAGACAGCACGTGGGGAGGAGGTAGCAAATATGAAGTTTGGAGGAGAGGTTGAGACAATTACCAGCATAGAGCAACTCCGAGATGCTATACATTCACCTGGAGTATCTGTTGTTTACTTCATGGCAACGATGAATCAGCAGTGTCAACAGATAACCCCATCCGTGGACTCTCTTTGCTCCGAGTGCCCTTCAGTGAATTTTCTGAAGGTAAATGTTGATGAGAGTCCTATGGTAGCAAGAGCGGAGAATGTGCGCATAGTCCCGAGCTTCAAGATATACAAGGACGGTGCAAGAATGAAGGAGATGATCTGCCCCAGCTTACACATCTTGCGCTATTCAGTCAAGCATTATGCTGTCTCCAGTTCTTGAGGAGGTCTTACTAGTGGCACTCATATTTTTTGATGCATATAATTCCCTGTCACCTACCAACATTTTACCAACAAACTATTCTCTATAATCAGCCTCCACAGCATTTCTCCAGCTGCATAGTTACTCTCCGCTGAGCATAATGAGCTAAAGCTTGATTCACGAAGTAGTTTCCTATTGGCTATCTTTCCTTTGTTACCTGTTGCATCTATTTTCTGATCCTTCATCCTTCCAACCTTATTCTTGGATCATTTAGGTTCCTTCATTTGCTTATTCCCACCCATCCATCGTTCGGCCAACCTGCATTGTGCAATTCTTTCATCTCTTACATTCTGTTCTGCCACCTCATAATGCATTTGACACATTTTTGCTGCAGCCCATAGGCCACTCCTCAAGAAAAAGAATGCTTCTGTTCTGACATTGTTTAGATGCAGGCATGCTTGTTGTTAGAGAAAGAAATAAGAGGCTGCAGACAGAATTGGTTTTTTTCATTACATGTACATATACCATATAGCAAAAACATGAAACCAATTGGAAGATTTGATTCTATGGAGGGATGGTGGTGCCACTTTGCAGTGGACAGAAGTACAGGGCTAGTTGCCAATTGTAGAGAGAAGATAGATGAAGAAAGACAATGTAATTGGTAGGGAGATAATGAGGGAGGTGGTTGATGTCTCTTTGCATATGCCTCTGCTGGGTCTGTGGTGCTGATACATATATACTACTTGCTGACATTTTTATGAATAAAAATAGCCCAACATTCTTTCTT]
[+] EMBL CB670667 [ AACCCGCCGCGGCCGCCAGGGCACCGCCGCTCCGGATCTGGGCCTCTGATATTCTCCGGCGGGAGCAGCAGCGCCGGGAGCGGAGGAGGAGGAGGAGGCTGCGGCGGCGGGAGCACGGCGAGCTCGCCGCTGACCAATGCGCTGCCTACCGGTAACATCTGCCCGTCCGGCCGCGTCGCGAGCGCGGCGCCTGCGCCGCCCCGACGCGCCCGTCCCGACGTGCTTGGATCCGGCACGGGGCACTATGGCCACGGCAGCATCATGAGAGGCGGCGGCGGCATGACTCCCCCTAGAAGCAGCATTGACGCCAGTCCGTACCACGGCAGCTACTCGAGGTCGCCGGCGCCGCAGGGCAGCAGCGGGGGTCTCCAGGAGGTGACCAGGGCCGGGAACGAGTGGTACAAGAAGGGCCATTACGGCGAGGCGCTGCGGCACTACGACCAGGCGGTGGCGCTGTGCCCGGACAGCGCCGCGTGCCGCAGCAACCGCGCCGCCGCGCTCATCGGCCTCGGCCGCCTCGCCGAAGCGCTCCGCGAGTGCGAGGAGGCCATCCGCCGTGACCCGGCGAGCGGCCGCGCGCACAGCCGCCTCGCCGCGCTCTGCCTCCGGTTTGGAATGGTTGAGAGGGCAAGGGAGCACTTCATGTTAGCTGGGCAAGTAAATCAGTCAGACCCAGCTGAGTTTCAGAGGCTCCAAGAGGTGGAAAGACATCTGGGGCGATGCATGGATGCGAGGAAAACTGGAGACTGGAAGAGTGCGCTAAGGGAAGCAGATGCTGCCATTGCCAATGGAGCGGATTCCTCTCAGTTG ]
[+] EMBL CB640266 [ AGCAGCGGGGGTCTCCAGGAGGTGACCAGGGCCGGGAACGAGTGGTACAAGAAGGGCCATTACGGCGAGGCGCTGCGGCACTACGACCAGGCGGTGGCGCTGTGCCCGGACAGCGCCGCGTGCCGCAGCAACCGCGCCGCCGCGCTCATCGGCCTCGGCCGCCTCGCCGAAGCGCTCCGCGAGTGCGAGGAGGCCATCCGCCGTGACCCGGCGAGCGGCCGCGCGCACAGCCGCCTCGCCGCGCTCTGCCTCCGGTTTGGAATGGTTGAGAGGGCAAGGGAGCACTTCATGTTAGCTGGGCAAGTAAATCAGTCAGACCCAGCTGAGTTTCAGAGGCTCCAAGAGGTGGAAAGACATCTGGGGCGATGCATGGATGCGA ]
[+] EMBL CB631059 [ ATCGGCCTCGGCCGCCTCGCCGAAGCGCTCCGCGAGTGCGAGGAGGCCATCCGCCGTGACCCGGCGAGCGGCCGCGCGCACAGCCGCCTCGCCGCGCTCTGCCTCCGGTTTGGAATGGTTGAGAGGGCAAGGGAGCACTTCATGTTAGCTGGGCAAGTAAATCAGTCAGACCCAGCTGAGTTTCAGAGGCTCCAAGAGGTGGAAAGACATCTGGGGCGATGCATGGATGCGAGGAAAACTGGAGACTGGAAGAGTGCGCTAAGGGAAGCAGATGCTGCCATTGCCAATGGAGCGGATTCCTCTCAGTTGCTTCTTGCCTTACGGTCTGAAGCACTTCTCCGTCTCAACAAACTAGAGGAGGCCGATTCGACTATTACAAGCTTGTCAAAACTGGACATTGCATCGCTATCTTCAATGTCAACTAAACTATCGGGCATGGTTGCTGATTCATATGTTCATGTTGTCGAAGCCCAGGTCAACATGGCTTTTGGAAGGTTTGACATAGCTGTTACCATGGCTGAGAAGGCTAGGGTTATTGATCCTGGAAATACAGAAGTTGGAAGGATTACAAACAACATAAGATTAGTTGCACAAGCTCGAGGACAGGGAAATGAGCTTTTTAAGGCAGGCAAGTTTGCTGAGGCATCCTTAGCTNATGGTGAAGGGCTCAAATATGAGCCCTCAAATCCAGTACTGTACTGCAATCGAGCAGCTTGTTGGTCAAAGTTAGGTCGGTGGATGAAAGCTGTTGAAGATTGCAATGAGGCCCTCAAAGTCCATCCTGGTTACA ]
[+] EMBL CA999865 [ AGCATAGAGCAACTCCGAGATGCTATACATTCACCTGGAGTATCTGTTGTTTACTTCATGGCAACGATGAATCAGCAGTGTCAACAGATAACCCCATCCGTGGACTCTCTTTGCTCCGAGTGCCCTTCAGTGAATTTTCTGAAGGTAAATGTTGATGAGAGTCCTATGGTAGCAAGAGCGGAGAATGTGCGCATAGTCCCGAGCTTCAAGATATACAAGGACGGTGCAAGAATGAAGGAGATGATCTGCCCCAGCTTACACATCTTGCGCTATTCAGTCAAGCATTATGCTGTCTCCAGTTCTTGAGGAGGTCTTACTAGTGGCACTCATATTTTTTGATGCATATAATTCCCTGTCACCTACCAACATTTTACCAACAAACTATTCTCTATAATCAGCCTCCACAGCATTTCTCCAGCTGCATAGTTACTCTCCGCTGAGCATAATGAGCTAAAGCTTGATTCACGAAGTAGTTTCCTATTGGCTATCTTTCCTTTGTTACCTGTTGCATCTATTTTCTGATCCTTCATCCTTCCAACCTTATTCTTGGATCATTTAGGTTCCTTCATTTGCTTATTCCCACCCATCCATCGTTCGGCCAACCTGCATTGTGCAATTCTCTCATCTCTTACATTCTGTTCTGCCACCTCATAATG ]
[-] EMBL CB631060 [ AGATGATCTGCCCCAGCTTACACATCTTGCGCTATTCAGTCAAGCATTATGCTGTCTCCAGTTCTTGAGGAGGTCTTACTAGTGGCACTCATATTTTTTGATGCATATAATTCCCTGTCACCTACCAACATTTTACCAACAAACTATTCTCTATAATCAGCCTCCACAGCATTTCTCCAGCTGCATAGTTACTCTCCGCTGAGCATAATGAGCTAAAGCTTGATTCACGAAGTAGTTTCCTATTGGCTATCTTTCCTTTGTTACCTGTTGCATCTATTTTCTGATCCTTCATCCTTCCAACCTTATTCTTGGATCATTTAGGTTCCTTCATTTGCTTATTCCCACCCATCCATCGTTCGGCCAACCTGCATTGTGCAATTCTTTCATCTCTTACATTCTGTTCTGCCACCTCATAATGCATTTGACACATTTTTGCTGCAGCCCATAGGCCACTCCTCAAGAAAAAGAATGCTTCTGTTCTGACATTGTTTAGATGCAGGCATGCTTGTTGTTAGAGAAAGAAATAAGAGGCTGCAGACAGAATTGGTTTTTTTCATTACATGTACATATACCATATAGCAAAAACATGAAACCAATTGGAAGATTTGATTCTATGGAGGGATGGTGGTGCCACTTTGCAGTGGACAGAAGTACAGGGCTAGTTGCCAATTGTAGAGAGAAGATAGATGAAGAAAGACAATGTAATTGGTAGGGAGATAATGAGGGAGGTGGTTGATGTCTCTTTGCATATGCCTCTGCTGGGTCTGTGGTGCTGATACATATATACTACTTGCTGACGTTTTTATGAATAAAAATAGCCCAACATTCTTTCT ]
[-] EMBL CB670668 [ ATTATGCTGTCTCCAGTTCTTGAGGAGGTCTTACTAGTGGCACTCATATTTTTTGATGCATATAATTCCCTGTCACCTACCAACATTTTACCAACAAACTATTCTCTATAATCAGCCTCCACAGCATTTCTCCAGCTGCATAGTTACTCTCCGCTGAGCATAATGAGCTAAAGCTTGATTCACGAAGTAGTTTCCTATTGGCTATCTTTCCTTTGTTACCTGTTGCATCTATTTTCTGATCCTTCATCCTTCCAACCTTATTCTTGGATCATTTAGGTTCCTTCATTTGCTTATTCCCACCCATCCATCGTTCGGCCAACCTGCATTGTGCAATTCTTTCATCTCTTACATTCTGTTCTGCCACCTCATAATGCATTTGACACATTTTTGCTGCAGCCCATAGGCCACTCCTCAAGAAAAAGAATGCTTCTGTTCTGACATTGTTTAGATGCAGGCATGCTTGTTGTTAGAGAAAGAAATAAGAGGCTGCAGACAGAATTGGTTTTTTTCATTACATGTACATATACCATATAGCAAAAACATGAAACCAATTGGAAGATTTGATTCTATGGAGGGATGGTGGTGCCACTTTGCAGTGGACAGAAGTACAGGGCTAGTTGCCAATTGTAGAGAGAAGATAGATGAAGAAAGACAATGTAATTGGTAGGGAGATAATGAGGGAGGTGGTTGATGTCTCTTTGCATATGCCTCTGCTGGGTCTGTGGTGCTGATACATATATACTACTTGCTGAC ]
[+] EMBL AK058702 [ ATTTTTGCTGCAGCCCATAGGCCACTCCTCAAGAAAAAGAATGCTTCTGTTCTGACATTGTTTAGATGCAGGCATGCTTGTTGTTAGAGAAAGAAATAAGAGGCTGCAGACAGAATTGGTTTTTTTCATTACATGTACATATACCATATAGCAAAAACATGAAACCAATTGGAAGATTTGATTCTATGGAGGGATGGTGGTGCCACTTTGCAGTGGACAGAAGTACAGGGCTAGTTGCCAATTGTAGAGAGAAGATAGATGAAGAAAGACAATGTAATTGGTAGGGAGATAATGAGGGAGGTGGTTGATGTCTCTTTGCATATGCCTCTGCTGGGTCTGTGGTGCTGATACATATATACTACTTGCTGACATTTTTATGAATAAAAATAGCCCAAC ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||