These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10687#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3215 fasta sequence [TCTTCTTCTTCTTCTTTCTTTCTATTCCTTTCCTTCCTCCTCACTTCTTCCTTCTTCTTCCTCCTCCACTCTCCTCTCCCCTCCATCCAACGCTGCTTCGTCTTTGGAGTTGGAGTTGGAGTTGGACACCACCCACCGGCACCTAGCTAGGCTTCTCTACCATCATCTGTGATCTTTCTTGTCGAGAGAGAGAGCAAGCAGTTGCATGCCTGATTGGTCAGCGAGTGAGCTGCTGGTGGCGGTGGCGGCCGCGCTTAGTCAGCGGTGGTGACTGTCCCGGCGATGTCGGGAGCTGACCGGCTAAGCATCCGCGCCGCGGCGCTGGCGCTCGACGATGCTGCCGCCGGGAGGGACAAGCCGGACACCAAGCGTGACGTCTTCGCGGATCTTGGCTCGCCGGTGTCGCCGCTGCGGCTGCGGCCTGGCGGCGCCGCGGCCACGCCGTCGTCGTCCTCCTCGTCCGCTGGCTCGGCCAAGTCGCCCGCGCTGTGCAATGCTGGGGCGGGGGTGGGTAGGGGAGGAGGAGGAGGCCGGGGGAGCCACTCAGGCGAGCTGGTGGCGGAGGGGAACCCGCCGCGGCCGCCAGGGCACCGCCGCTCCGGATCTGGGCCTCTGATATTCTCCGGCGGGAGCAGCAGCGCCGGGAGCGGAGGAGGAGGAGGAGGCTGCGGCGGCGGGAGCACGGCGAGCTCGCCGCTGACCAATGCGCTGCCTACCGGTAACATCTGCCCGTCCGGCCGCGTCGCGAGCGCGGCGCCTGCGCCGCCCCGACGCGCCCGTCCCGACGTGCTTGGATCCGGCACGGGGCACTATGGCCACGGCAGCATCATGAGAGGCGGCGGCGGCATGACTCCCCCTAGAAGCAGCATTGACGCCAGTCCGTACCACGGCAGCTACTCGAGGTCGCCGGCGCCGCAGGGCAGCAGCGGGGGTCTCCAGGAGGTGACCAGGGCCGGGAACGAGTGGTACAAGAAGGGCCATTACGGCGAGGCGCTGCGGCACTACGACCAGGCGGTGGCGCTGTGCCCGGACAGCGCCGCGTGCCGCAGCAACCGCGCCGCCGCGCTCATCGGCCTCGGCCGCCTCGCCGAAGCGCTCCGCGAGTGCGAGGAGGCCATCCGCCGTGACCCGGCGAGCGGCCGCGCGCACAGCCGCCTCGCCGCGCTCTGCCTCCGGTTTGGAATGGTTGAGAGGGCAAGGGAGCACTTCATGTTAGCTGGGCAAGTAAATCAGTCAGACCCAGCTGAGTTTCAGAGGCTCCAAGAGGTGGAAAGACATCTGGGGCGATGCATGGATGCGAGGAAAACTGGAGACTGGAAGAGTGCGCTAAGGGAAGCAGATGCTGCCATTGCCAATGGAGCGGATTCCTCTCAGTTGCTTCTTGCCTTACGGTCTGAAGCACTTCTCCGTCTCAACAAACTAGAGGAGGCCGATTCGACTATTACAAGCTTGTCAAAACTGGACATTGCATCGCTATCTTCAATGTCAACTAAACTATCGGGCATGGTTGCTGATTCATATGTTCATGTTGTCGAAGCCCAGGTCAACATGGCTTTTGGAAGGTTTGACATAGCTGTTACCATGGCTGAGAAGGCTAGGGTTATTGATCCTGGAAATACAGAAGTTGGAAGGATTACAAACAACATAAGATTAGTTGCACAAGCTCGAGGACAGGGAAATGAGCTTTTTAAGGCAGGCAAGTTTGCTGAGGCGTCCTTAGCTTATGGTGAAGGGCTCAAATATGAGCCCTCAAATCCAGTACTGTACTGCAATCGAGCAGCTTGTTGGTCAAAGTTAGGTCGGTGGATGAAAGCTGTTGAAGATTGCAATGAGGCCCTCAAAGTCCATCCTGGTTACACGAAGGCTCTCTTAAGACGTGCAGCATCCTATGCAAAGGTAAGCGATACATGTATCATTGTATTTCTGATTATTTGCGCATTGTGGTGTTGATATCTCCCTGTTAACACTCAATTAGCTTGAGCGCTGGGCCGATTGTGTGCGGGACTATGAGGTGCTACGCAAGGAGCTTCCTAACGACACGGAGGTTGCGGAAGCATTGTTCCATGCGCAAGTTGCACTGAAGACAGCACGTGGGGAGGAGGTAGCAAATATGAAGTTTGGAGGAGAGGTTGAGACAATTACCAGCATAGAGCAACTCCGAGATGCTATACATTCACCTGGAGTATCTGTTGTTTACTTCATGGCAACGATGAATCAGCAGTGTCAACAGATAACCCCATCCGTGGACTCTCTTTGCTCCGAGTGCCCTTCAGTGAATTTTCTGAAGGTAAATGTTGATGAGAGTCCTATGGTAGCAAGAGCGGAGAATGTGCGCATAGTCCCGAGCTTCAAGATATACAAGGACGGTGCAAGAATGAAGGAGATGATCTGCCCCAGCTTACACATCTTGCGCTATTCAGTCAAGCATTATGCTGTCTCCAGTTCTTGAGGAGGTCTTACTAGTGGCACTCATATTTTTTGATGCATATAATTCCCTGTCACCTACCAACATTTTACCAACAAACTATTCTCTATAATCAGCCTCCACAGCATTTCTCCAGCTGCATAGTTACTCTCCGCTGAGCATAATGAGCTAAAGCTTGATTCACGAAGTAGTTTCCTATTGGCTATCTTTCCTTTGTTACCTGTTGCATCTATTTTCTGATCCTTCATCCTTCCAACCTTATTCTTGGATCATTTAGGTTCCTTCATTTGCTTATTCCCACCCATCCATCGTTCGGCCAACCTGCATTGTGCAATTCTTTCATCTCTTACATTCTGTTCTGCCACCTCATAATGCATTTGACACATTTTTGCTGCAGCCCATAGGCCACTCCTCAAGAAAAAGAATGCTTCTGTTCTGACATTGTTTAGATGCAGGCATGCTTGTTGTTAGAGAAAGAAATAAGAGGCTGCAGACAGAATTGGTTTTTTTCATTACATGTACATATACCATATAGCAAAAACATGAAACCAATTGGAAGATTTGATTCTATGGAGGGATGGTGGTGCCACTTTGCAGTGGACAGAAGTACAGGGCTAGTTGCCAATTGTAGAGAGAAGATAGATGAAGAAAGACAATGTAATTGGTAGGGAGATAATGAGGGAGGTGGTTGATGTCTCTTTGCATATGCCTCTGCTGGGTCTGTGGTGCTGATACATATATACTACTTGCTGACATTTTTATGAATAAAAATAGCCCAACATTCTTTCTT] [+] EMBL AK120811 [TCTTCTTCTTCTTCTTTCTTTCTATTCCTTTCCTTCCTCCTCACTTCTTCCTTCTTCTTCCTCCTCCACTCTCCTCTCCCCTCCATCCAACGCTGCTTCGTCTTTGGAGTTGGAGTTGGAGTTGGACACCACCCACCGGCACCTAGCTAGGCTTCTCTACCATCATCTGTGATCTTTCTTGTCGAGAGAGAGAGCAAGCAGTTGCATGCCTGATTGGTCAGCGAGTGAGCTGCTGGTGGCGGTGGCGGCCGCGCTTAGTCAGCGGTGGTGACTGTCCCGGCGATGTCGGGAGCTGACCGGCTAAGCATCCGCGCCGCGGCGCTGGCGCTCGACGATGCTGCCGCCGGGAGGGACAAGCCGGACACCAAGCGTGACGTCTTCGCGGATCTTGGCTCGCCGGTGTCGCCGCTGCGGCTGCGGCCTGGCGGCGCCGCGGCCACGCCGTCGTCGTCCTCCTCGTCCGCTGGCTCGGCCAAGTCGCCCGCGCTGTGCAATGCTGGGGCGGGGGTGGGTAGGGGAGGAGGAGGAGGCCGGGGGAGCCACTCAGGCGAGCTGGTGGCGGAGGGGAACCCGCCGCGGCCGCCAGGGCACCGCCGCTCCGGATCTGGGCCTCTGATATTCTCCGGCGGGAGCAGCAGCGCCGGGAGCGGAGGAGGAGGAGGAGGCTGCGGCGGCGGGAGCACGGCGAGCTCGCCGCTGACCAATGCGCTGCCTACCGGTAACATCTGCCCGTCCGGCCGCGTCGCGAGCGCGGCGCCTGCGCCGCCCCGACGCGCCCGTCCCGACGTGCTTGGATCCGGCACGGGGCACTATGGCCACGGCAGCATCATGAGAGGCGGCGGCGGCATGACTCCCCCTAGAAGCAGCATTGACGCCAGTCCGTACCACGGCAGCTACTCGAGGTCGCCGGCGCCGCAGGGCAGCAGCGGGGGTCTCCAGGAGGTGACCAGGGCCGGGAACGAGTGGTACAAGAGGGGCCATTACGGCGAGGCGCTGCGGCACTACGACCAGGCGGTGGCGCTGTGCCCGGACAGCGCCGCGTGCCGCAGCAGCCGCGCCGCCGCGCTCATCGGCCTCGGCCGCCTCGCCGAAGCGCTCCGCGAGTGCGAGGAGGCCATCCGCCGTGACCCGGCGAGCGGCCGCGCGCACAGCCGCCTCGCCGCGCTCTGCCTCCGGTTTGGAATGGTTGAGAGGGCAAGGGAGCGCTTCATGTTAGCTGGGCAAGTAAATCAGTCAGACCCAGCTGAGTTTCAGAGGCTCCAAGAGGTGGAAAGACATCTGGGGCGATGCATGGATGCGAGGAAAACTGGAGACTGGAAGAGTGCGCTAAGGGAAGCAGATGCTGCCATTGCCAATGGAGCGGATTCCTCTCAGTTGCTTCTTGCCTTACGGTCTGAAGCACTTCTCCGTCTCAACAAACTAGAGGAGGCCGATTCGACTATTACAAGCTTGTCAAAACTGGACATTGCATCGCTATCTTCAATGTCAACTAAACTATCGGGCATGGTTGCTGATTCATATGTTCATGTTGTCGAAGCCCAGGTCAACATGGCTTTTGGAAGGTTTGACATAGCTGTTACCATGGCTGAGAAGGCTAGGGTTATTGATCCTGGAAATACAGAAGTTGGAAGGATTACAAACAACATAAGATTAGTTGCACAAGCTCGAGGACAGGGAAATGAGCTTTTTAAGGCAGGCAAGTTTGCTGAGGCGTCCTTAGCTTATGGTGAAGGGCTCAAATATGAGCCCTCAAATCCAGTACTGTACTGCAATCGAGCAGCTTGTTGGTCAAAGTTAGGTCGGTGGATGAAAGCTGTTGAAGATTGCAATGAGGCCCTCAAAGTCCATCCTGGTTACACGAAGGCTCTCTTAAGACGTGCAGCATCCTATGCAAAGGTAAGCGATACATGTATCATTGTATTTCTGATTATTTGCGCATTGTGGTGTTGATATCTCCCTGTTAACACTCAATTAGCTTGAGCGCTGGGCCGATTGTGTGCGGGACTATGAGGTGCTACGCAAGGAGCTTCCTAACGACACGGAGGTTGCGGAAGCATTGTTCCATGCGCAAGTTGCACTGAAGACAGCACGTGGGGAGGAGGTAGCAAATATGAAGTTTGGAGGAGAGGTTGAGACAATTACCAGCATAGAGCAACTCCGAGATGCTATACATTCACCTGGAGTATCTGTTGTTTACTTCATGGCAACGATGAATCAGCAGTGTCAACAGATAACCCCATCCGTGGACTCTCTTTGCTCCGAGTGCCCTTCAGTGAATTTTCTGAAGGTAAATGTTGATGAGAGTCCTATGGTAGCAAGAGCGGAGAATGTGCGCATAGTCCCGAGCTTCAAGATATACAAGGACGGTGCAAGAATGAAGGAGATGATCTGCCCCAGCTTACACATCTTGCGCTATTCAGTCAAGCATTATGCTGTCTCCAGTTCTTGAGGAGGTCTTACTAGTGGCACTCATATTTTTTGATGCATATAATTCCCTGTCACCTACCAACATTTTACCAACAAACTATTCTCTATAATCAGCCTCCACAGCATTTCTCCAGCTGCATAGTTACTCTCCGCTGAGCATAATGAGCTAAAGCTTGATTCACGAAGTAGTTTCCTATTGGCTATCTTTCCTTTGTTACCTGTTGCATCTATTTTCTGATCCTTCATCCTTCCAACCTTATTCTTGGATCATTTAGGTTCCTTCATTTGCTTATTCCCACCCATCCATCGTTCGGCCAACCTGCATTGTGCAATTCTTTCATCTCTTACATTCTGTTCTGCCACCTCATAATGCATTTGACACATTTTTGCTGCAGCCCATAGGCCACTCCTCAAGAAAAAGAATGCTTCTGTTCTGACATTGTTTAGATGCAGGCATGCTTGTTGTTAGAGAAAGAAATAAGAGGCTGCAGACAGAATTGGTTTTTTTCATTACATGTACATATACCATATAGCAAAAACATGAAACCAATTGGAAGATTTGATTCTATGGAGGGATGGTGGTGCCACTTTGCAGTGGACAGAAGTACAGGGCTAGTTGCCAATTGTAGAGAGAAGATAGATGAAGAAAGACAATGTAATTGGTAGGGAGATAATGAGGGAGGTGGTTGATGTCTCTTTGCATATGCCTCTGCTGGGTCTGTGGTGCTGATACATATATACTACTTGCTGACATTTTTATGAATAAAAATAGCCCAACATTCTTTCTT] [+] EMBL CB670667 [ AACCCGCCGCGGCCGCCAGGGCACCGCCGCTCCGGATCTGGGCCTCTGATATTCTCCGGCGGGAGCAGCAGCGCCGGGAGCGGAGGAGGAGGAGGAGGCTGCGGCGGCGGGAGCACGGCGAGCTCGCCGCTGACCAATGCGCTGCCTACCGGTAACATCTGCCCGTCCGGCCGCGTCGCGAGCGCGGCGCCTGCGCCGCCCCGACGCGCCCGTCCCGACGTGCTTGGATCCGGCACGGGGCACTATGGCCACGGCAGCATCATGAGAGGCGGCGGCGGCATGACTCCCCCTAGAAGCAGCATTGACGCCAGTCCGTACCACGGCAGCTACTCGAGGTCGCCGGCGCCGCAGGGCAGCAGCGGGGGTCTCCAGGAGGTGACCAGGGCCGGGAACGAGTGGTACAAGAAGGGCCATTACGGCGAGGCGCTGCGGCACTACGACCAGGCGGTGGCGCTGTGCCCGGACAGCGCCGCGTGCCGCAGCAACCGCGCCGCCGCGCTCATCGGCCTCGGCCGCCTCGCCGAAGCGCTCCGCGAGTGCGAGGAGGCCATCCGCCGTGACCCGGCGAGCGGCCGCGCGCACAGCCGCCTCGCCGCGCTCTGCCTCCGGTTTGGAATGGTTGAGAGGGCAAGGGAGCACTTCATGTTAGCTGGGCAAGTAAATCAGTCAGACCCAGCTGAGTTTCAGAGGCTCCAAGAGGTGGAAAGACATCTGGGGCGATGCATGGATGCGAGGAAAACTGGAGACTGGAAGAGTGCGCTAAGGGAAGCAGATGCTGCCATTGCCAATGGAGCGGATTCCTCTCAGTTG ] [+] EMBL CB640266 [ AGCAGCGGGGGTCTCCAGGAGGTGACCAGGGCCGGGAACGAGTGGTACAAGAAGGGCCATTACGGCGAGGCGCTGCGGCACTACGACCAGGCGGTGGCGCTGTGCCCGGACAGCGCCGCGTGCCGCAGCAACCGCGCCGCCGCGCTCATCGGCCTCGGCCGCCTCGCCGAAGCGCTCCGCGAGTGCGAGGAGGCCATCCGCCGTGACCCGGCGAGCGGCCGCGCGCACAGCCGCCTCGCCGCGCTCTGCCTCCGGTTTGGAATGGTTGAGAGGGCAAGGGAGCACTTCATGTTAGCTGGGCAAGTAAATCAGTCAGACCCAGCTGAGTTTCAGAGGCTCCAAGAGGTGGAAAGACATCTGGGGCGATGCATGGATGCGA ] [+] EMBL CB631059 [ ATCGGCCTCGGCCGCCTCGCCGAAGCGCTCCGCGAGTGCGAGGAGGCCATCCGCCGTGACCCGGCGAGCGGCCGCGCGCACAGCCGCCTCGCCGCGCTCTGCCTCCGGTTTGGAATGGTTGAGAGGGCAAGGGAGCACTTCATGTTAGCTGGGCAAGTAAATCAGTCAGACCCAGCTGAGTTTCAGAGGCTCCAAGAGGTGGAAAGACATCTGGGGCGATGCATGGATGCGAGGAAAACTGGAGACTGGAAGAGTGCGCTAAGGGAAGCAGATGCTGCCATTGCCAATGGAGCGGATTCCTCTCAGTTGCTTCTTGCCTTACGGTCTGAAGCACTTCTCCGTCTCAACAAACTAGAGGAGGCCGATTCGACTATTACAAGCTTGTCAAAACTGGACATTGCATCGCTATCTTCAATGTCAACTAAACTATCGGGCATGGTTGCTGATTCATATGTTCATGTTGTCGAAGCCCAGGTCAACATGGCTTTTGGAAGGTTTGACATAGCTGTTACCATGGCTGAGAAGGCTAGGGTTATTGATCCTGGAAATACAGAAGTTGGAAGGATTACAAACAACATAAGATTAGTTGCACAAGCTCGAGGACAGGGAAATGAGCTTTTTAAGGCAGGCAAGTTTGCTGAGGCATCCTTAGCTNATGGTGAAGGGCTCAAATATGAGCCCTCAAATCCAGTACTGTACTGCAATCGAGCAGCTTGTTGGTCAAAGTTAGGTCGGTGGATGAAAGCTGTTGAAGATTGCAATGAGGCCCTCAAAGTCCATCCTGGTTACA ] [+] EMBL CA999865 [ AGCATAGAGCAACTCCGAGATGCTATACATTCACCTGGAGTATCTGTTGTTTACTTCATGGCAACGATGAATCAGCAGTGTCAACAGATAACCCCATCCGTGGACTCTCTTTGCTCCGAGTGCCCTTCAGTGAATTTTCTGAAGGTAAATGTTGATGAGAGTCCTATGGTAGCAAGAGCGGAGAATGTGCGCATAGTCCCGAGCTTCAAGATATACAAGGACGGTGCAAGAATGAAGGAGATGATCTGCCCCAGCTTACACATCTTGCGCTATTCAGTCAAGCATTATGCTGTCTCCAGTTCTTGAGGAGGTCTTACTAGTGGCACTCATATTTTTTGATGCATATAATTCCCTGTCACCTACCAACATTTTACCAACAAACTATTCTCTATAATCAGCCTCCACAGCATTTCTCCAGCTGCATAGTTACTCTCCGCTGAGCATAATGAGCTAAAGCTTGATTCACGAAGTAGTTTCCTATTGGCTATCTTTCCTTTGTTACCTGTTGCATCTATTTTCTGATCCTTCATCCTTCCAACCTTATTCTTGGATCATTTAGGTTCCTTCATTTGCTTATTCCCACCCATCCATCGTTCGGCCAACCTGCATTGTGCAATTCTCTCATCTCTTACATTCTGTTCTGCCACCTCATAATG ] [-] EMBL CB631060 [ AGATGATCTGCCCCAGCTTACACATCTTGCGCTATTCAGTCAAGCATTATGCTGTCTCCAGTTCTTGAGGAGGTCTTACTAGTGGCACTCATATTTTTTGATGCATATAATTCCCTGTCACCTACCAACATTTTACCAACAAACTATTCTCTATAATCAGCCTCCACAGCATTTCTCCAGCTGCATAGTTACTCTCCGCTGAGCATAATGAGCTAAAGCTTGATTCACGAAGTAGTTTCCTATTGGCTATCTTTCCTTTGTTACCTGTTGCATCTATTTTCTGATCCTTCATCCTTCCAACCTTATTCTTGGATCATTTAGGTTCCTTCATTTGCTTATTCCCACCCATCCATCGTTCGGCCAACCTGCATTGTGCAATTCTTTCATCTCTTACATTCTGTTCTGCCACCTCATAATGCATTTGACACATTTTTGCTGCAGCCCATAGGCCACTCCTCAAGAAAAAGAATGCTTCTGTTCTGACATTGTTTAGATGCAGGCATGCTTGTTGTTAGAGAAAGAAATAAGAGGCTGCAGACAGAATTGGTTTTTTTCATTACATGTACATATACCATATAGCAAAAACATGAAACCAATTGGAAGATTTGATTCTATGGAGGGATGGTGGTGCCACTTTGCAGTGGACAGAAGTACAGGGCTAGTTGCCAATTGTAGAGAGAAGATAGATGAAGAAAGACAATGTAATTGGTAGGGAGATAATGAGGGAGGTGGTTGATGTCTCTTTGCATATGCCTCTGCTGGGTCTGTGGTGCTGATACATATATACTACTTGCTGACGTTTTTATGAATAAAAATAGCCCAACATTCTTTCT ] [-] EMBL CB670668 [ ATTATGCTGTCTCCAGTTCTTGAGGAGGTCTTACTAGTGGCACTCATATTTTTTGATGCATATAATTCCCTGTCACCTACCAACATTTTACCAACAAACTATTCTCTATAATCAGCCTCCACAGCATTTCTCCAGCTGCATAGTTACTCTCCGCTGAGCATAATGAGCTAAAGCTTGATTCACGAAGTAGTTTCCTATTGGCTATCTTTCCTTTGTTACCTGTTGCATCTATTTTCTGATCCTTCATCCTTCCAACCTTATTCTTGGATCATTTAGGTTCCTTCATTTGCTTATTCCCACCCATCCATCGTTCGGCCAACCTGCATTGTGCAATTCTTTCATCTCTTACATTCTGTTCTGCCACCTCATAATGCATTTGACACATTTTTGCTGCAGCCCATAGGCCACTCCTCAAGAAAAAGAATGCTTCTGTTCTGACATTGTTTAGATGCAGGCATGCTTGTTGTTAGAGAAAGAAATAAGAGGCTGCAGACAGAATTGGTTTTTTTCATTACATGTACATATACCATATAGCAAAAACATGAAACCAATTGGAAGATTTGATTCTATGGAGGGATGGTGGTGCCACTTTGCAGTGGACAGAAGTACAGGGCTAGTTGCCAATTGTAGAGAGAAGATAGATGAAGAAAGACAATGTAATTGGTAGGGAGATAATGAGGGAGGTGGTTGATGTCTCTTTGCATATGCCTCTGCTGGGTCTGTGGTGCTGATACATATATACTACTTGCTGAC ] [+] EMBL AK058702 [ ATTTTTGCTGCAGCCCATAGGCCACTCCTCAAGAAAAAGAATGCTTCTGTTCTGACATTGTTTAGATGCAGGCATGCTTGTTGTTAGAGAAAGAAATAAGAGGCTGCAGACAGAATTGGTTTTTTTCATTACATGTACATATACCATATAGCAAAAACATGAAACCAATTGGAAGATTTGATTCTATGGAGGGATGGTGGTGCCACTTTGCAGTGGACAGAAGTACAGGGCTAGTTGCCAATTGTAGAGAGAAGATAGATGAAGAAAGACAATGTAATTGGTAGGGAGATAATGAGGGAGGTGGTTGATGTCTCTTTGCATATGCCTCTGCTGGGTCTGTGGTGCTGATACATATATACTACTTGCTGACATTTTTATGAATAAAAATAGCCCAAC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||