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Oryza sativa
cluster # 10688 cluster # 10688       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10688#0 length = 2075 sequences # 6  
consensus_10688#1 length = 775 sequences # 1  
consensus_10688#2 length = 684 sequences # 1  

consensusID : consensus_10688#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2075
fasta sequence
                              [AACACCATTCTACTTTGGCCACTGCTGCATGTTCGACGAAATGCCCACGCGAGTACGCCACTAAGATTCGCCCC-GCATCTACGTCGATTCCCCGGTTCCCCCTCGCTTCCCGTCGAGGAATCCGGCGAGATCGAGGCGCCCCGCGCTAATCCGGCGATCCTCGCCGTCCCGCCCCGGCTGGATCTCCGTGCTGGGTGGGGGGCGGCCGCGGCCTTGATGGTACTTCGGATCCGGAGGACGAGGAGGCGGCGGCGATGAGCAGGCTGGCGTCGGCGTCGGGGCTCCACCGGCTGCGGCGGTCGCCATGGGAGGTGCTGTGGTCGGGGCTGGCCTCCTGCGGCCTCACGCTCCTCTCGCAGCTCGCCGTGGCCATGGTGCCCCGCCTCTTCCCTTCCCTCTCCCTCCTCGCCATGCTCCCCGTCGCAGGCGTGGTGTT-CCTGGCCGTCATCGTGGTGGGCAGGTTCTGGAGGAGGTTCATCGGAGTGGCGGCATCGGCGCCGCTGTTCGTACTGTTCAACATCCTCTTCTTGTGGGGCGTCTACGTGTTTGTCATCCGGGGAGGCACTTCTTCCCTGTTAGATATGGTAATTAATGCTGAATGTGCAATGCTTTTGTTTGGACTTTACAGGATATTTTCTGGTGATCCTGGCATTGTGATCTATGAATCTTCATTTTTCGAAGAAGCTGGCTGTAAGGATTTTGTGGAAGCTATATGCCCGAGTGAGAAATTTTCATCACTTCCAAGGGTAAGGCACTGTAACTGCTGCAAAGCAAATGTTAGAGGTTATGATCACCATTGTCCTGCATTTGGTAACTGCATAGGACAGAAAAATCATCGGCTGTTTATGGCCCTTTTGACAGGCTTTGTTGTCGCTGAATCGACATATACAATGTGTTCAACTAAATATATCACTAGATGCATAAATTCTGGAACTATAAGATCGGAGAATCCTATGTCTGTTAACATGGTAATCGGCACAATGCTCTTCTCTGTTCTCCAAGTGCTCTGGCAGGCTGTGTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGAGTGGGTAATGTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTTCTCGTTTGCTGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATACCCTGAATTCCAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCCATATGACAAAGGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTGATCCTAAGTACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTGAAAGATTGTTTTGCTTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGCCACTAGTAGCTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGCGGGAACTGTATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACATACATCTTGTAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGCAATATTTTGATGCTTTGAGGTGCCAGTATATTTTCTGACCATGTCGTTCTGTCGTGCTGAAATCTTGAGGTAGGATCCAGCAATTAGGCAAAGATGGGCTGGCTGAGTCTGCAGATCAGGATGGAGGTTTACTTGGTCCAAGTGTTCTGCTGTCATCTTCTCAGCCGCCACTAGAAATTATCGTAAGAAAAGGATGTTCCAAGGCGTGGAATGGCCAAAGCCCAAATTGACAGCGACGTGCTGCTTATCTTACCGGGTCAGGTTGTCGCCGTCAAGAAGAGTGGGCATGCTTTGCCGAGTCAGGAAAGCGCGCACTCAGTTTTCCCAGTAAACCCAAAACCCTCAGCTTTAGTAGCCAGCTTTTATTAGTACGTGAATCATTGACACATTCTTTACCCATTACTCATCATACTTTATACTCGTACAGCTCCTTTAACGAATGGGATTAAAAGGTGTT]

[+] EMBL AK120743             [AACACCATTCTACTTTGGCCACTGCTGCATGTTCGACGAAATGCCCACGCGAGTACGCCACTAAGATTCGCCCC GCATCTACGTCGATTCCCCGGTTCCCCCTCGCTTCCCGTCGAGGAATCCGGCGAGATCGAGGCGCCCCGCGCTAATCCGGCGATCCTCGCCGTCCCGCCCCGGCTGGATCTCCGTGCTGGGTGGGGGGCGGCCGCGGCCTTGATGGTACTTCGGATCCGGAGGACGAGGAGGCGGCGGCGATGAGCAGGCTGGCGTCGGCGTCGGGGCTCCACCGGCTGCGGCGGTCGCCATGGGAGGTGCTGTGGTCGGGGCTGGCCTCCTGCGGCCTCACGCTCCTCTCGCAGCTCGCCGTGGCCATGGTGCCCCGCCTCTTCCCTTCCCTCTCCCTCCTCGCCATGCTCCCCGTCGCAGGCGTGGTGTT CCTGGCCGTCATCGTGGTGGGCAGGTTCTGGAGGAGGTTCATCGGAGTGGCGGCATCGGCGCCGCTGTTCGTACTGTTCAACATCCTCTTCTTGTGGGGCGTCTACGTGTTTGTCATCCGGGGAGGCACTTCTTCCCTGTTAGATATGGTAATTAATGCTGAATGTGCAATGCTTTTGTTTGGACTTTACAGGATATTTTCTGGTGATCCTGGCATTGTGATCTATGAATCTTCATTTTTCGAAGAAGCTGGCTGTAAGGATTTTGTGGAAGCTATATGCCCGAGTGAGAAATTTTCATCACTTCCAAGGGTAAGGCACTGTAACTGCTGCAAAGCAAATGTTAGAGGTTATGATCACCATTGTCCTGCATTTGGTAACTGCATAGGACAGAAAAATCATCGGCTGTTTATGGCCCTTTTGACAGGCTTTGTTGTCGCTGAATCGACATATACAATGTGTTCAACTAAATATATCACTAGATGCATAAATTCTGGAACTATAAGATCGGAGAATCCTATGTCTGTTAACATGGTAATCGGCACAATGCTCTTCTCTGTTCTCCAAGTGCTCTGGCAGGCTGTGTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGAGTGGGTAATGTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTTCTCGTTTGCTGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATACCCTGAATTCCAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCCATATGACAAAGGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTGATCCTAAGTACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTGAAAGATTGTTTTGCTTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGCCACTAGTAGCTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGCGGGAACTGTATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACATACATCTTGTAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGCAATATTTTGATGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA756312             [                    ACTGCTGCATGTTCGACGAAATGCCCACGCGAGTACGCCACTAAGATTCGCCCC GCATCTACGTCGATTCCCCGGTTCCCCCTCGCTTCCCGTCGAGGAATCCGGCGAGATCGAGGCGCCCCGCGCTAATCCGGCGATCCTCGCCGTCCCGCCCCGGCTGGATCTCCGTGCTGGGTGGGGGGCGGCCGCGGCCTTGATGGTACTTCGGATCCGGAGGACGAGGAGGCGGCGGCGATGAGCAGGCTGGCGTCGGCGTCGGGGCTCCACCGGCTGCGGCGGTCGCCATGGGAGGTGCTGTGGTCGGGGCTGGCCTCCTGCGGGCTCACGCTCCTCTCGCAGNTCGCCGTGGGCATGGTGCCCCGCCTCTTCCCTTCCCTCTCCCTCCTCGGCATGGTCCCCGTCGCAGGAGTGGTGTTCCCTGG CGTCATCGTGGTGGGCAGGGTCTGGAGGAGGTTCATCGGAGTGGCGGCATCCGCGCCGCTGTTCGTACTGGTCCACATCCTCCTCTTGGGGGGCGTCTACGTGTTTGTCATCCGGGGAGG ACCTCCTCCCTGTTAGA ATGGGAA TAATGCTGAATGGGC ATGC TTTGTTTGGAC TTACAGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU176553             [                          gcgtccgCGACGAAATGCCCACGCGAGTACGCCACTAAGATTCGCCCCNGCATCTACGTCGATTCCCCGGTTCCCCCTCGCTTCCCGTCGAGGAATCCGGCGAGATCGAGGCGCCCCGCGCTAATCCGGCGATCCTCGCCGTCCCGCCCCGGCTGGATCTCCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB636759             [                                          GCCCACGCGAGTACGCCACTAAGATTCGCCCC GCATCTACGTCGATTCCCCGGTTCCCCCTCGCTTCCCGTCGAGGAATCCGGCGAGATCGAGGCGCCCCGCGCTAATCCGGCGATCCTCGCCGTCCCGCCCCGGCTGGATCTCCGTGCTGGGTGGGGGGCGGCCGCGGCCTTGATGGTACTTCGGATCCGGAGGACGAGGAGGCGGCGGCGATGAGCAGGCTGGCGTCGGCGTCGGGGCTCCACCGGCTGCGGCGGTCGCCATGGGAGGTGCTGTGGTCGGGGCTGGCCTCCTGCGGCCTCACGCTCCTCTCGCAGCTCGCCGTGGCCATGGTGCCCCGCCTCTTCCCTTCCCTCTCCCTCCTCGCCATGCTCCCCGTCGCAGGCGTGGTGTT CCTGGCCGTCATCGTGGTGGGCAGGTTCTGGAGGAGGTTCATCGGAGTGGCGGCATCGGCGCCGCTGTTCGTACTGTTCAACATCCTCTTCTTGTGGGGCGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB654102             [                                                                                                               CGTCGCGGAATCCGGCGAGATCGAGGCGCCCCGCGCTAATCCGGCGATCCTCGCCGTCCCGCCCCGGCTGGATCTCCGTGCTGGGTGGGGGGCGGCCGCGGCCTTGATGGTACTTCGGATCCGGAGGACGAGGAGGCGGCGGCGATGAGCAGGCTGGCGTCGGCGTCGGGGCTCCACCGGCTGCGGCGGTCGCCATGGGAGGTGCTGTGGTCGGGGCTGGCCTCCTGCGGCCTCACGCTCCTCTCGCAGCTCGCCGTGGCCATGGTGCCCCGCCTCTTCCCTTCCCTCTCCCTCCTCGCCATGCTCCCCGTCGCAGGCGTGGTGTT CCTGGCCGTCATCGTGGTGGGCAGGTTCTGGAGGAGGTTCATCGGAGTGGCGGCATCGGCGCCGCTGTTCGTACTGTTCAACATCCTCTTCTTGTGGGGCGTCTACGTGTTTGTCATCCGGGGAGGCACTTCTTCCCTGTTAGATATGGTAATTAATGCTGAATGTGCAATGCTTTTGTTTGGACTTTACAGGATATTTTCTGGTGATCCTGGCATTGTGATCTATGAATCTTCATTTTTCGAAGAAGCTGGCTGTAAGGATTTTGTGGAAGCTATATGCCCGAGTGAGAAATTTTCATCACTTCCAAGGGTAAGGCACTGTAACTGCTGCAAAGCAAATGTTAGAGGTTATGATCACCATTGTCCTGCATTTGGTAACTGCATAGGACAGAAAAATCATCGGCTGTTTATGGCCCTTTTGACAGGCTTTGTTGTCGCTGAATCGACATATACAATGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB636760             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCGTTCCACCCAAGTACATACATCTTGTAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGCAATATTTTGATGCTTTGAGGTGCCAGTATATTTTCTGACCATGTCGTTCTGTCGTGCTGAAATCTTGAGGTAGGATCCAGCAATTAGGCAAAGATGGGCTGGCTGAGTCTGCAGATCAGGATGGAGGTTTACTTGGTCCAAGTGTTCTGCTGTCATCTTCTCAGCCGCCACTAGAAATTATCGTAAGAAAAGGATGTTCCAAGGCGTGGAATGGCCAAAGCCCAAATTGACAGCGACGTGCTGCTTATCTTACCGGGTCAGGTTGTCGCCGTCAAGAAGAGTGGGCATGCTTTGCCGAGTCAGGAAAGCGCGCACTCAGTTTTCCCAGTAAACCCAAAACCCTCAGCTTTAGTAGCCAGCTTTTATTAGTACGTGAATCATTGACACATTCTTTACCCATTACTCATCATACTTTATACTCGTACAGCTCCTTTAACGAATGGGATTAAAAGGTGTT]


>consensus_10688#0 AACACCATTCTACTTTGGCCACTGCTGCATGTTCGACGAAATGCCCACGCGAGTACGCCA CTAAGATTCGCCCCGCATCTACGTCGATTCCCCGGTTCCCCCTCGCTTCCCGTCGAGGAA TCCGGCGAGATCGAGGCGCCCCGCGCTAATCCGGCGATCCTCGCCGTCCCGCCCCGGCTG GATCTCCGTGCTGGGTGGGGGGCGGCCGCGGCCTTGATGGTACTTCGGATCCGGAGGACG AGGAGGCGGCGGCGATGAGCAGGCTGGCGTCGGCGTCGGGGCTCCACCGGCTGCGGCGGT CGCCATGGGAGGTGCTGTGGTCGGGGCTGGCCTCCTGCGGCCTCACGCTCCTCTCGCAGC TCGCCGTGGCCATGGTGCCCCGCCTCTTCCCTTCCCTCTCCCTCCTCGCCATGCTCCCCG TCGCAGGCGTGGTGTTCCTGGCCGTCATCGTGGTGGGCAGGTTCTGGAGGAGGTTCATCG GAGTGGCGGCATCGGCGCCGCTGTTCGTACTGTTCAACATCCTCTTCTTGTGGGGCGTCT ACGTGTTTGTCATCCGGGGAGGCACTTCTTCCCTGTTAGATATGGTAATTAATGCTGAAT GTGCAATGCTTTTGTTTGGACTTTACAGGATATTTTCTGGTGATCCTGGCATTGTGATCT ATGAATCTTCATTTTTCGAAGAAGCTGGCTGTAAGGATTTTGTGGAAGCTATATGCCCGA GTGAGAAATTTTCATCACTTCCAAGGGTAAGGCACTGTAACTGCTGCAAAGCAAATGTTA GAGGTTATGATCACCATTGTCCTGCATTTGGTAACTGCATAGGACAGAAAAATCATCGGC TGTTTATGGCCCTTTTGACAGGCTTTGTTGTCGCTGAATCGACATATACAATGTGTTCAA CTAAATATATCACTAGATGCATAAATTCTGGAACTATAAGATCGGAGAATCCTATGTCTG TTAACATGGTAATCGGCACAATGCTCTTCTCTGTTCTCCAAGTGCTCTGGCAGGCTGTGT TCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGAGTGGGTAATGT CAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTTCTCGTTTGCTG TTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATACCCTGAATTCCA GATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCCATATGACAAAGG CGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTGATCCTAAGTAC AGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTGAAAGATTGTTT TGCTTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGCCACTAGTAGCT AGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGCGGGAACTGTAT TGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACATACATCTTGTA ACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGCAA TATTTTGATGCTTTGAGGTGCCAGTATATTTTCTGACCATGTCGTTCTGTCGTGCTGAAA TCTTGAGGTAGGATCCAGCAATTAGGCAAAGATGGGCTGGCTGAGTCTGCAGATCAGGAT GGAGGTTTACTTGGTCCAAGTGTTCTGCTGTCATCTTCTCAGCCGCCACTAGAAATTATC GTAAGAAAAGGATGTTCCAAGGCGTGGAATGGCCAAAGCCCAAATTGACAGCGACGTGCT GCTTATCTTACCGGGTCAGGTTGTCGCCGTCAAGAAGAGTGGGCATGCTTTGCCGAGTCA GGAAAGCGCGCACTCAGTTTTCCCAGTAAACCCAAAACCCTCAGCTTTAGTAGCCAGCTT TTATTAGTACGTGAATCATTGACACATTCTTTACCCATTACTCATCATACTTTATACTCG TACAGCTCCTTTAACGAATGGGATTAAAAGGTGTT



consensusID : consensus_10688#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 775
fasta sequence
                              [CTGCATAGGACAGAAAAATCATCGGCTGTTTATGGCCCTTTTGACAGGCTTTGTTGTCGCTGAATCGACATATACAATGTGTTCAACTAAATATATCACTAGATGCATAAATTCTGGAACTATAAGATCGGAGGCTGTGTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGAGTGGGTAATGTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTTCTCGTTTGCTGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATACCCTGAATTCCAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCCATATGACAAAGGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTGATCCTAAGTACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTGAAAGATTGTTTTGCTTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGCCACTAGTAGCTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGCGGGAACTGTATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACATACATCTTGTAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGCAATATTTTGATGCTTTGAGGTGCCAGTAAAAAAAAGA]

[-] EMBL CB654103             [CTGCATAGGACAGAAAAATCATCGGCTGTTTATGGCCCTTTTGACAGGCTTTGTTGTCGCTGAATCGACATATACAATGTGTTCAACTAAATATATCACTAGATGCATAAATTCTGGAACTATAAGATCGGAGGCTGTGTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGAGTGGGTAATGTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTTCTCGTTTGCTGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATACCCTGAATTCCAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCCATATGACAAAGGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTGATCCTAAGTACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTGAAAGATTGTTTTGCTTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGCCACTAGTAGCTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGCGGGAACTGTATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACATACATCTTGTAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGCAATATTTTGATGCTTTGAGGTGCCAGTAAAAAAAAGA]


>consensus_10688#1 CTGCATAGGACAGAAAAATCATCGGCTGTTTATGGCCCTTTTGACAGGCTTTGTTGTCGC TGAATCGACATATACAATGTGTTCAACTAAATATATCACTAGATGCATAAATTCTGGAAC TATAAGATCGGAGGCTGTGTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAA GACAGATGAGTGGGTAATGTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCA GGCCATCTTCTCGTTTGCTGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGG AAGAAATACCCTGAATTCCAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTT GTGAATCCATATGACAAAGGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAA CACGAGCTGATCCTAAGTACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCT GGAATTCTGAAAGATTGTTTTGCTTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCA TCATTTGGCCACTAGTAGCTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCC TTGTTGAGCGGGAACTGTATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCAC CCAAGTACATACATCTTGTAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACA CATCGTATTCCTGCAAGCAATATTTTGATGCTTTGAGGTGCCAGTAAAAAAAAGA



consensusID : consensus_10688#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 684
fasta sequence
                              [AACTAAACCTTTTACTACCTATNTTCTAATCATGCCACAACTAATTTGGTTGCTTCCCTGCTAGGCTGTGTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGAGTGGGTAATGTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTTCTCGTTTGCTGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATACCCTGAATTCCAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCAATATGACAAAGGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTGATCCTAAGTACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTGAAAGATTGTTTTGCCTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGCCACTAGTAGCTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGCGGGAACTGTATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACATACATCTTGTAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGCAAAAAAAAAAAAAAG]

[-] EMBL CA761196             [AACTAAACCTTTTACTACCTATNTTCTAATCATGCCACAACTAATTTGGTTGCTTCCCTGCTAGGCTGTGTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGAGTGGGTAATGTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTTCTCGTTTGCTGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATACCCTGAATTCCAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCAATATGACAAAGGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTGATCCTAAGTACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTGAAAGATTGTTTTGCCTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGCCACTAGTAGCTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGCGGGAACTGTATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACATACATCTTGTAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGCAAAAAAAAAAAAAAG]


>consensus_10688#2 AACTAAACCTTTTACTACCTATNTTCTAATCATGCCACAACTAATTTGGTTGCTTCCCTG CTAGGCTGTGTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGA GTGGGTAATGTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTT CTCGTTTGCTGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATAC CCTGAATTCCAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCAA TATGACAAAGGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTG ATCCTAAGTACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTG AAAGATTGTTTTGCCTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGC CACTAGTAGCTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGC GGGAACTGTATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACA TACATCTTGTAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATT CCTGCAAGCAAAAAAAAAAAAAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10688#0      AACACCATTCTACTTTGGCCACTGCTGCATGTTCGACGAAATGCCCACGCGAGTACGCCA 60
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      CTAAGATTCGCCCCGCATCTACGTCGATTCCCCGGTTCCCCCTCGCTTCCCGTCGAGGAA 120
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      TCCGGCGAGATCGAGGCGCCCCGCGCTAATCCGGCGATCCTCGCCGTCCCGCCCCGGCTG 180
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      GATCTCCGTGCTGGGTGGGGGGCGGCCGCGGCCTTGATGGTACTTCGGATCCGGAGGACG 240
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      AGGAGGCGGCGGCGATGAGCAGGCTGGCGTCGGCGTCGGGGCTCCACCGGCTGCGGCGGT 300
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      CGCCATGGGAGGTGCTGTGGTCGGGGCTGGCCTCCTGCGGCCTCACGCTCCTCTCGCAGC 360
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      TCGCCGTGGCCATGGTGCCCCGCCTCTTCCCTTCCCTCTCCCTCCTCGCCATGCTCCCCG 420
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      TCGCAGGCGTGGTGTTCCTGGCCGTCATCGTGGTGGGCAGGTTCTGGAGGAGGTTCATCG 480
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      GAGTGGCGGCATCGGCGCCGCTGTTCGTACTGTTCAACATCCTCTTCTTGTGGGGCGTCT 540
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      ACGTGTTTGTCATCCGGGGAGGCACTTCTTCCCTGTTAGATATGGTAATTAATGCTGAAT 600
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      GTGCAATGCTTTTGTTTGGACTTTACAGGATATTTTCTGGTGATCCTGGCATTGTGATCT 660
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      ATGAATCTTCATTTTTCGAAGAAGCTGGCTGTAAGGATTTTGTGGAAGCTATATGCCCGA 720
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      GTGAGAAATTTTCATCACTTCCAAGGGTAAGGCACTGTAACTGCTGCAAAGCAAATGTTA 780
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      GAGGTTATGATCACCATTGTCCTGCATTTGGTAACTGCATAGGACAGAAAAATCATCGGC 840
consensus_10688#1      ----------------------------------CTGCATAGGACAGAAAAATCATCGGC 26
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      TGTTTATGGCCCTTTTGACAGGCTTTGTTGTCGCTGAATCGACATATACAATGTGTTCAA 900
consensus_10688#1      TGTTTATGGCCCTTTTGACAGGCTTTGTTGTCGCTGAATCGACATATACAATGTGTTCAA 86
consensus_10688#2      ----------------------------------------------------------AA 2
                                                                                 **

consensus_10688#0      CTAAATATATCACTAGATGCATA--AATTCTGGAACTATAAGATCGGAGAATCCTATGTC 958
consensus_10688#1      CTAAATATATCACTAGATGCATA--AATTCTGGAACTATAAGATCGGAG----------- 133
consensus_10688#2      CTAAACCTTTTACTACCTATNTTCTAATCATGCCACAACTAATTTGGTTGCTTCC----- 57
                       *****  * * ****  *   *   ***  **  ** *  *  * **             

consensus_10688#0      TGTTAACATGGTAATCGGCACAATGCTCTTCTCTGTTCTCCAAGTGCTCTGGCAGGCTGT 1018
consensus_10688#1      -------------------------------------------------------GCTGT 138
consensus_10688#2      ------------------------------------------------CTGCTAGGCTGT 69
                                                                              *****

consensus_10688#0      GTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGAGTGGGTAAT 1078
consensus_10688#1      GTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGAGTGGGTAAT 198
consensus_10688#2      GTTCTTGATATGGCACATATATTGCATCTGCTTCAACATCAAGACAGATGAGTGGGTAAT 129
                       ************************************************************

consensus_10688#0      GTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTTCTCGTTTGC 1138
consensus_10688#1      GTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTTCTCGTTTGC 258
consensus_10688#2      GTCAAACTTCCCATGCTTTGGACTCTTCCTTCATCAATTGCAGGCCATCTTCTCGTTTGC 189
                       ************************************************************

consensus_10688#0      TGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATACCCTGAATTC 1198
consensus_10688#1      TGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATACCCTGAATTC 318
consensus_10688#2      TGTTTCTTATAGCTAAGAGGTGAGATTTTCCAGATAAACTGGAAGAAATACCCTGAATTC 249
                       ************************************************************

consensus_10688#0      CAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCCATATGACAAA 1258
consensus_10688#1      CAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCCATATGACAAA 378
consensus_10688#2      CAGATGAAGGAACAGCCTCAATCAGATTCTGGAGTAAAGTTTGTGAATCAATATGACAAA 309
                       ************************************************* **********

consensus_10688#0      GGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTGATCCTAAGT 1318
consensus_10688#1      GGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTGATCCTAAGT 438
consensus_10688#2      GGCGTGCTCTGTAACATTATAGAATTTCTGAAGCCGAAATAACACGAGCTGATCCTAAGT 369
                       ************************************************************

consensus_10688#0      ACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTGAAAGATTGT 1378
consensus_10688#1      ACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTGAAAGATTGT 498
consensus_10688#2      ACAGACGTTAAAAACATGGGAAATCATTGCATCAAGTGATCTGGAATTCTGAAAGATTGT 429
                       ************************************************************

consensus_10688#0      TTTGCTTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGCCACTAGTAG 1438
consensus_10688#1      TTTGCTTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGCCACTAGTAG 558
consensus_10688#2      TTTGCCTCTTACAGCCAAATTGATGGGAATTTGTTGTGAGCATCATTTGGCCACTAGTAG 489
                       ***** ******************************************************

consensus_10688#0      CTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGCGGGAACTGT 1498
consensus_10688#1      CTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGCGGGAACTGT 618
consensus_10688#2      CTAGTTAGATCAACACGCAATTGACACTCTCTGAAAACTTCCTTGTTGAGCGGGAACTGT 549
                       ************************************************************

consensus_10688#0      ATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACATACATCTTG 1558
consensus_10688#1      ATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACATACATCTTG 678
consensus_10688#2      ATTGCAATGGATGCTGCATCGGACGTGATTTGGGCGTTCCACCCAAGTACATACATCTTG 609
                       ************************************************************

consensus_10688#0      TAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGC 1618
consensus_10688#1      TAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGC 738
consensus_10688#2      TAACTCTAGAAAATGATTCATTGTGTGGATTGAAGGAATACACATCGTATTCCTGCAAGC 669
                       ************************************************************

consensus_10688#0      AATATTTTGATGCTTTGAGGTGCCAGTATATTTTCTGACCATGTCGTTCTGTCGTGCTGA 1678
consensus_10688#1      AATATTTTGATGCTTTGAGGTGCCAGTAAAAAAAAGA----------------------- 775
consensus_10688#2      AAAAAAAAAAAAAAG--------------------------------------------- 684
                       ** *     *                                                  

consensus_10688#0      AATCTTGAGGTAGGATCCAGCAATTAGGCAAAGATGGGCTGGCTGAGTCTGCAGATCAGG 1738
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      ATGGAGGTTTACTTGGTCCAAGTGTTCTGCTGTCATCTTCTCAGCCGCCACTAGAAATTA 1798
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      TCGTAAGAAAAGGATGTTCCAAGGCGTGGAATGGCCAAAGCCCAAATTGACAGCGACGTG 1858
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      CTGCTTATCTTACCGGGTCAGGTTGTCGCCGTCAAGAAGAGTGGGCATGCTTTGCCGAGT 1918
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      CAGGAAAGCGCGCACTCAGTTTTCCCAGTAAACCCAAAACCCTCAGCTTTAGTAGCCAGC 1978
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      TTTTATTAGTACGTGAATCATTGACACATTCTTTACCCATTACTCATCATACTTTATACT 2038
consensus_10688#1      ------------------------------------------------------------
consensus_10688#2      ------------------------------------------------------------
                                                                                   

consensus_10688#0      CGTACAGCTCCTTTAACGAATGGGATTAAAAGGTGTT 2075
consensus_10688#1      -------------------------------------
consensus_10688#2      -------------------------------------
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)