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Oryza sativa
cluster # 10707 cluster # 10707       Sequences # 8       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10707#0 length = 914 sequences # 8  
consensusID : consensus_10707#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 914
fasta sequence 
                              [CACCACGAACTCTCCAAGCTCTTCTTCCTCCTGAGCACTCTAGCTTCACTGCATTGCTTTGCAGCAGCAACAGAAACAGAGAGAGAGAAATACACTAGCTGATTGATCCAGTGGAATTTGGTAGCTGTGATGGCGAAGAAGATCGCGCCGGCGGCCAACCTGAAGCAGATCCTGAGGAGGTGCTCGAGCCTTGGGAGGAGGCAGCAGCAGCAGGGCGCGG-TGCCGAGGGGCCACTTCCCGGTGTACGTCG-GCGAGAGCGGTTG-CCGGTACGTGGTGCCCATCGCCTGCCTGGAGCACCCGGACTTCCTGCTGCTGCTTCGGAAGGCCGAGGAGGAGTTCGGCTTCGAGCACGACGCCGCCATCACG-CTTCCCTGCCACG-AGGCCGACTTTGAAGCCCTCCTCGCCGCCCTGACTGCCTGAGTGACCGTTCAATCGATGAGGCGATCGACCACTTACCCGGCCGTCGT-CGTTGGT-GGCTGCCGCTTCCGGCGCACGGTGCTGCAGCAGCTGCCCGGTCGCTCGGCCGGGGCACCAGAGATGCACGCACAC-GCAGTGGCAGTACGGCTGGCATTGGTTGGAGCTTGGTTGTGTAG-TGT--AGA--CC-GGAAA-TGC----AAACA-TGGGA-GTTCCGGCCGGAAA--CC-GA-TCAATCACCGGGCGGGTAGACTCTGCTTCAGCTGCCCGGTGGCCGGTGGGGGTTCCGGGCTTCTTGCTCGTGGGATTCTTTCACGAATTCTTGCCGGTTCATGCAGCAAAATTTGCTGCTTTTAGCTAGCTATCTAGCTTAGTGTACGTACGCGCGTATGTATATAATGCGGAGACCAATTGATTGATTTGTTCCTCGAATGGTTTTGATCAAATGAAGGAGAACACCATTGCTCACCTCAGGCGCGCACTGCCTGATGTGACCTTCTTGATAAAAA]

[+] EMBL AK063247             [CACCACGAACTCTCCAAGCTCTTCTTCCTCCTGAGCACTCTAGCTTCACTGCATTGCTTTGCAGCAGCAACAGAAAC  AGAGAGAGAAATACACTAGCTGATTGATCCAGTGGAATTTGGTAGCTGTGATGGCGAAGAAGATCGCGCCGGCGGCCAACCTGAAGCAGATCCTGAGGAGGTGCTCGAGCCTTGGGAGGAGGCAGCAGCAGCAGGGCGCGG TGCCGAGGGGCCACTTCCCGGTGTACGTCG GCGAGAGCCGGTG CCGGTACGTGGTGCCCATCGCCTGCCTGGAGCACCCGGACTTCCTGCTGCTGCTTCGGAAGGCCGAGGAGGAGTTCGGCTTCGAGCACGACGCCGCCATCACG CTTCCCTGCCACG AGGCCGACTTTGAAGCCCTCCTCGCCGCCCTGACTGCCTGAGTGACCGTTCAATCGATGAGGCGATCGACCACTTACCCGGCCGTCGT CGTTGGT GGCTGCCGCTTCCGGCGCACGGTGCTGCAGCAGCTGCCCGGTCGCTCGGCCGGGGCACCAGAGATGCACGCACAC GCAGTGGCAGTACGGCTGGCATTGGTTGGAGCTTGGTTGTGTAG TGT  AGA  CC GGAAA TGC    AAACA TGGGA GTTCCGGCCGGAAA  CC GA TCAATCACCGGGCGGGTAGACTCTGCTTCAGCTGCCCGGTGGCCGGTGGGGGTTCCGGGCTTCTTGCTCGTGGGATTCTTTCACGAATTCTTGCCGGTTCATGCAGCAAAATTTGCT                                                                                                                                                                ]
[+] EMBL OSS3565A             [             CCAAGCTCTTCTTCCTCCTGAGCACTCTAGCTTCACTGCATTGCTTTGCAGCAGCAACAGAAACAGAGAGAGAGAAATACACTAGCTGATTGATCCAGTGGAATTTGGTAGCTGTGATGGCGAAGAAGATCGCGCCGGCGGCCAACCTGAAGCAGATCCTGAGGAGGTGCTCGAGCCTTGGGAGGAGGCAGCAGCAGCAGGGCGCGG TGCCGAGGGGCCACTTTCCGGTGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSS3317A             [                   TCTTCTNCCTCCTGAGCACTCTAGCTTCACTGCATTGCTTTNCAGCAGCAACAGNAACAGAGAGAGAGAAATACACTAGCTGATTGATCCAGNGGAATTTGGTAGCTNTGATGGCGNAGAAGATCGCGCCGGCGGCCAACCTGAAGNAGATCCTGAGGAGGTGCTCGAGCCTTAGGAGGAGGCAGCAGCAGCAGGNCGCGG TGCCGAGGNGCCACNTCCCGTTGTACGTGGAGCGAGAGCGGTTG CCGATACGTGGTNCCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU033213             [                         TCCTCCTGAGCACTCTAGCTTCACTGCATTGCTTTGCAGCAGCAACAGAAACAGAGAGAGAGAAATACACTAGCTGATTGATCCAGTGGAATTTGGTAGCTGTGATGGCGAAGAAGATCGCGNCGGC GCCAACCTGAAGCAGATCCTGAGGAGGTGCTCGAGCCTTGGGAGGAGGCAGCAGCAGCAGGGCGCGGTTGCCGAGGGGCCACTTCCCGGTGTACGTCG GCGAGA  NGTTGNCCGGTACGTGGTGCCCATCGCCTGCCTGGAGCACCCGGACTTCCTGCTGCTGCTTCGGAAGGCCGAGGANGAGTTCGGCTTCGAGCACGACGGCGCCATCACGNTTTCCCTGCCACGAAGGCCGACTTTNAAagg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU031152             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       gcgtccGCGATCGACCACTTACCCGNCCGTCGTCCGTTGGTGGGCTGCCGCTTCCGGCGCACNGTGCTGCAGCAGCTGCCCGGTCNCTCGGCCGGGGCACCAGAGATGCACGCACAC GCAGTGGCAGTACGGCTGGCATTGGTTGGAGCTTGGTTGTGTNG TGT  AGA  CC GGAAA TGC    AAACA TGGGN GTTCCGGCCGGAAA  CC GA TCAATCACCGGGCGGGTAGACTCTGCTTCAGCTGCCCGGTGGCCGGTGGGGGTTCCGGGCTTCTTGCTCGTGGGATTCTTTCACGAATTCTTGCCGGTTCATGCAGCAAAATTTGCTGCTTTTAGCTAGCTATCTAGCTTNGTGTACGTACGCGCGTATGTATATAATGCGGAGACCAATTGATTGATTTGTTCCTCGAAaaaaa                                                                        ]
[+] EMBL AU097301             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        nGTCGCTCGGCC GGGCACCAGAGATGCACGCACACNGCA TGGCAGTACGGCT GCATTGGTTGGAGCTTGGTTGTGTAG TGT  AGA  CC GGAAA TGC    AAACA TGGGA GTTCCGGCCGGAAA  CC GA TCAATCACCGGGCGGGTAGACTCTGCTTCAGCTGCCCGGTGGCCGGTGGGGGTTCCGGGCTTCTTGCTCGTGGGATTCTTTCACGAATTCTTGCCGGTTCATGCAGCAAAATTTGCTGCTTTTAGCTAGCTATCTAGCTTAGTGTACGTACGCGCGTATGTATATAATGCGGAGACCAATTGATTGATTTGTTCCTCGAATGGTTTTGATCAAATGAAGGAGAACACCATTGCTCACCTCAGGCGCGCACTGCCTGATGTGACCTTCTTGATAAAAA]
[+] EMBL AU033214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGGAGCTTGGTTGTGTAG TGT  AGA  CC GGAAA TGC    AAACA TGGGA TTTCCGGCCGGAAA  CC GA TCAATCACCGGGCGGNTAGACTCTGCTTCAGCTGCCCGNTGNCCGGTGGGGGTTCCGGGCTTCTTGCTCGTGGGATTCTTTCACGAATTCTTGCCGGTTCATGCAGCAAAATTTGCTGCTTTTAGCTAGCTATCTAGCTTAGTGTACGTACGCGCGTATGTATATAATGCGGAGACCAATTGATTGATTTGTTCCTCGAATGGTTTTGATCAAATGAAGGAGAACACCATTGCTCACCTCAGGCGCGCACTGCCTGATGTGACCTTCTTGATAAAAA]
[+] EMBL AU097261             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ggngttGTTGTTAAGTTGTTAAGAACCCNGGAAATTGCCAANAACCATTGGGAGGTTCCCGCCCGAAAACCCGGATTCAATCACCGGGCGGGTAGACTCTGCTTCAGCTGCCCGGTGGCCGGTGGGGGTTCCGGGCTTCTTGCTCGTGGGATTCTTTCACGAATTCTTGCCGGTTCATGCAGCAAAATTTGCTGCTTTTAGCTAGCTATCTAGCTTAGTGTACGTACGCGCGTATGTATATAATGCGGAGACCAATTGATTGATTTGTTCCTCGAATGGTTTTGATCAAATGAAGGAGAACACCATTGCTCACCTCAGGCGCGCACTGCCTGATGTGACCTTCTTGATAAAA ]




>consensus_10707#0
CACCACGAACTCTCCAAGCTCTTCTTCCTCCTGAGCACTCTAGCTTCACTGCATTGCTTT
GCAGCAGCAACAGAAACAGAGAGAGAGAAATACACTAGCTGATTGATCCAGTGGAATTTG
GTAGCTGTGATGGCGAAGAAGATCGCGCCGGCGGCCAACCTGAAGCAGATCCTGAGGAGG
TGCTCGAGCCTTGGGAGGAGGCAGCAGCAGCAGGGCGCGGTGCCGAGGGGCCACTTCCCG
GTGTACGTCGGCGAGAGCGGTTGCCGGTACGTGGTGCCCATCGCCTGCCTGGAGCACCCG
GACTTCCTGCTGCTGCTTCGGAAGGCCGAGGAGGAGTTCGGCTTCGAGCACGACGCCGCC
ATCACGCTTCCCTGCCACGAGGCCGACTTTGAAGCCCTCCTCGCCGCCCTGACTGCCTGA
GTGACCGTTCAATCGATGAGGCGATCGACCACTTACCCGGCCGTCGTCGTTGGTGGCTGC
CGCTTCCGGCGCACGGTGCTGCAGCAGCTGCCCGGTCGCTCGGCCGGGGCACCAGAGATG
CACGCACACGCAGTGGCAGTACGGCTGGCATTGGTTGGAGCTTGGTTGTGTAGTGTAGAC
CGGAAATGCAAACATGGGAGTTCCGGCCGGAAACCGATCAATCACCGGGCGGGTAGACTC
TGCTTCAGCTGCCCGGTGGCCGGTGGGGGTTCCGGGCTTCTTGCTCGTGGGATTCTTTCA
CGAATTCTTGCCGGTTCATGCAGCAAAATTTGCTGCTTTTAGCTAGCTATCTAGCTTAGT
GTACGTACGCGCGTATGTATATAATGCGGAGACCAATTGATTGATTTGTTCCTCGAATGG
TTTTGATCAAATGAAGGAGAACACCATTGCTCACCTCAGGCGCGCACTGCCTGATGTGAC
CTTCTTGATAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)