cluster # 10713

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Oryza sativa
cluster # 10713 cluster # 10713 Sequences # 8 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10713#0 length = 2365 sequences # 3
consensus_10713#1 length = 2281 sequences # 3

consensus_10713#2 length = 543 sequences # 1
consensus_10713#3 length = 454 sequences # 1

consensusID : consensus_10713#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2365
fasta sequence

                              [CAGTCCCCTCCTCCCTCTCGTTCATTGCTCAGTATGTATCATCGAGAATGGTACGGATTCCCAATAAACTGATGTTGGGTGATCTAATAACTGAAGGCAAAATGAAGTAATATAATCGCATCAATTTGTAATGTTGTGGGGAGTTGATTTTGTTTTTGTTTTTCTGTACTGATGAGGTGTAGGCTAGCAGCGCCCGCCAACCGGCACTGAGGTAAGGAGTTCCACAACCACAGCACTCAGATGCAAATAATGGGCATGCCTCTGTCTAAGCTACTAAGCAGAGAAGCACACTGCAAATAAGAGCTGAGTGAGCTGGGAGCTGCCAATCTCTGTTTTCTCTTTTTCTTGGATTGCAATTTTTGATTTTAGATTGGATATTTGAGAGAATGCATAGGAAAGGGAAAGGAAAAGGGAAAGGGATGCCTTTACATTGTACTTATCTTTCCTTACGTTACCTATCTCAGATGTGGTCATAGTAATATACTTTTTTCTTTGTGCCACTTATCTTTCCTTTCTATGCTCCACTGATATATCAGCTGGTCCATGTGCCATTTGGTGATTGCTGCTTACATAGTTATTTTTATTTATCTCCGTACGCTATGTGATGTTATATTCCCTTCTCGATATATGTTCAGCCATTCAATCAGTTTTGATTAGTTAATGTTCATGCATCAGATTTGTTAATACAAAATGTTCTCTGATCTGGTATTCAGCTTGGCTACCAGTACATGTTACAAGTTCAATCTTCCACAAGCAATTGAGAAAGGTTGCAGGTGAGAGGCAAGCAGAAGCATGACAGGAATATTGATTTACTTACATGATAACCGTTGTGCCATTAGCCTTGGACAATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGATGGTGACTTTGGTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTTGGTCATGGACGTTGTTAGTGTTTTTCTCTCCCTTGAAATACATATTTTTTTCCTGACTATTGCCTTGGACAGTTGGAGATCATTGTGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAATTCAGAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATCTGGACAATCTTGGTTTGCAGCCCAAAGTAAAGGGCAAGTGTACGAATTTAGCCACAAAAGCGACGCCAACGAGGATCGCCATCGACGGTGACCGCTGCTCCATCGATCCTTCTTCCCCCGTTTGCTACTCTCACTTCACAGCCACAATCATGTCTTCCGCAGTGTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGCCTGTGCCAATCACACTTGCGACAGCATATAAGATGCAGCATGGAGATAATCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACACTGTACATGACGACAGGATGGAGATAATCTGAAGTTAGAAACTGGAGAAACGATTCTTTTCAGGATGCCATCAAGGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCTAACAAAAGGTCCCCTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTTCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGGCAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTTTCTAGAAGAATCAAACAAGTTCTATGTCGTGCGTATGAACAGAACATTCATGGAACAGGACAGAGTGTACTTTGCGACCGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAACATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCACTTTT-TAGG--ACAAGTCACCTCACGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCTTCAGTAGTCGCTGCTATTATCTACACTGGAACAACTACTATAAT--TCTCTATTATCCTTTGCTTGCGGTCTATCTAACTTCACTTGCTCTGTAAGCACGTGACCTATAACTGCTTATCATTGTCCTCAGCTCCTTTTGTTATCCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAAC-AGCTGGCTTGTTATACTACAGGTACTATGGTACTATTTGTTG]

[+] EMBL AK102626             [CAGTCCCCTCCTCCCTCTCGTTCATTGCTCAGTATGTATCATCGAGAATGGTACGGATTCCCAATAAACTGATGTTGGGTGATCTAATAACTGAAGGCAAAATGAAGTAATATAATCGCATCAATTTGTAATGTTGTGGGGAGTTGATTTTGTTTTTGTTTTTCTGTACTGATGAGGTGTAGGCTAGCAGCGCCCGCCAACCGGCACTGAGGTAAGGAGTTCCACAACCACAGCACTCAGATGCAAATAATGGGCATGCCTCTGTCTAAGCTACTAAGCAGAGAAGCACACTGCAAATAAGAGCTGAGTGAGCTGGGAGCTGCCAATCTCTGTTTTCTCTTTTTCTTGGATTGCAATTTTTGATTTTAGATTGGATATTTGAGAGAATGCATAGGAAAGGGAAAGGAAAAGGGAAAGGGATGCCTTTACATTGTACTTATCTTTCCTTACGTTACCTATCTCAGATGTGGTCATAGTAATATACTTTTTTCTTTGTGCCACTTATCTTTCCTTTCTATGCTCCACTGATATATCAGCTGGTCCATGTGCCATTTGGTGATTGCTGCTTACATAGTTATTTTTATTTATCTCCGTACGCTATGTGATGTTATATTCCCTTCTCGATATATGTTCAGCCATTCAATCAGTTTTGATTAGTTAATGTTCATGCATCAGATTTGTTAATACAAAATGTTCTCTGATCTGGTATTCAGCTTGGCTACCAGTACATGTTACAAGTTCAATCTTCCACAAGCAATTGAGAAAGGTTGCAGGTGAGAGGCAAGCAGAAGCATGACAGGAATATTGATTTACTTACATGATAACCGTTGTGCCATTAGCCTTGGACAATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGATGGTGACTTTGGTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTTGGTCATGGACGTTGTTAGTGTTTTTCTCTCCCTTGAAATACATATTTTTTTCCTGACTATTGCCTTGGACAGTTGGAGATCATTGTGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAATTCAGAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATCTGGACAATCTTGGTTTGCAGCCCAAAGTAAAGGGCAAGTGTACGAATTTAGCCACAAAAGCGACGCCAACGAGGATCGCCATCGACGGTGACCGCTGCTCCATCGATCCTTCTTCCCCCGTTTGCTACTCTCACTTCACAGCCACAATCATGTCTTCCGCAGTGTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGCCTGTGCCAATCACACTTGCGACAGCATATAAGATGCAGCATGGAGATAATCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACACTGTACATGACGACAGGATGGAGATAATCTGAAGTTAGAAACTGGAGAAACGATTCTTTTCAGGATGCCATCAAGGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCTAACAAAAGGTCCCCTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTTCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGGCAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTGTCTAGAAGAATCAAACAAGTTCTATGTCGTGCGTATGAACAGAACATTCATGGAACAGGACAGAGTGTACTTTGCGACTGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAACATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCACTTTTATAGGACACAAGTCACCTCATGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCTTCAGTAGTCGCTGCTATTATCTACCCTGGAACAGCTACTATAATTCTCTCTATTATCCTTTGCTTGCGGTCTATCTAACTTCACTTGCTCAGTAAGCACGTGACCTATAACTGCTTATCATTGTCCTCAGCTCCTTTTGTTATTCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAAC AGCTGGCTTGTTATACTACAGG                    ]
[-] EMBL CB675214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCATCACAGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCTTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCGAACAAAAGGCCCCTTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTCCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGGCAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTTTCTAGAAGAATCAAACAAGTTCTATGTCGTGCGTATGAACAGAACATTCATGGAACAGGACAGAGTGTACTTTGCGACCGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAACATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCACTTTT TAGG  ACAAGTCACCTCACGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCTTCAGTAGTCGCTGCTATTATCTACACTGGAACAACTACTATAAT  TCTCTATTATCCTTTGCTTGCGGTCTATCTAACTTCACTTGCTCTGTAAGCACGTGACCTATAACTGCTTATCATTGTCCTCAGCTCCTTTTGTTATCCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAACAAGCTGGCTTGTTATACTACAGCTACTATGGTACTATTTGTTG]
[-] EMBL CB634119             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTTTCTAGAAGAATCAAACAAGTTCTATGTCGTGCGTATGAACAGAACATTCATGGAACAGGACAGAGTGTACTTTGCGACCGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAACATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCACTTTT TAGG  ACAAGTCACCTCACGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCTTCAGTAGTCGCTGCTATTATCTACACTGGAACAACTACTATAAT  TCTCTATTATCCTTTGCTTGCGGTCTATCTAACTTCACTTGCTCTGTAAGCACGTGACCTATAACTGCTTATCATTGTCCTCAGCTCCTTTTGTTATCCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAAC AGCTGGCTTGTTATACTACAGGTACTATGGTACTATTTGTTG]




>consensus_10713#0
CAGTCCCCTCCTCCCTCTCGTTCATTGCTCAGTATGTATCATCGAGAATGGTACGGATTC
CCAATAAACTGATGTTGGGTGATCTAATAACTGAAGGCAAAATGAAGTAATATAATCGCA
TCAATTTGTAATGTTGTGGGGAGTTGATTTTGTTTTTGTTTTTCTGTACTGATGAGGTGT
AGGCTAGCAGCGCCCGCCAACCGGCACTGAGGTAAGGAGTTCCACAACCACAGCACTCAG
ATGCAAATAATGGGCATGCCTCTGTCTAAGCTACTAAGCAGAGAAGCACACTGCAAATAA
GAGCTGAGTGAGCTGGGAGCTGCCAATCTCTGTTTTCTCTTTTTCTTGGATTGCAATTTT
TGATTTTAGATTGGATATTTGAGAGAATGCATAGGAAAGGGAAAGGAAAAGGGAAAGGGA
TGCCTTTACATTGTACTTATCTTTCCTTACGTTACCTATCTCAGATGTGGTCATAGTAAT
ATACTTTTTTCTTTGTGCCACTTATCTTTCCTTTCTATGCTCCACTGATATATCAGCTGG
TCCATGTGCCATTTGGTGATTGCTGCTTACATAGTTATTTTTATTTATCTCCGTACGCTA
TGTGATGTTATATTCCCTTCTCGATATATGTTCAGCCATTCAATCAGTTTTGATTAGTTA
ATGTTCATGCATCAGATTTGTTAATACAAAATGTTCTCTGATCTGGTATTCAGCTTGGCT
ACCAGTACATGTTACAAGTTCAATCTTCCACAAGCAATTGAGAAAGGTTGCAGGTGAGAG
GCAAGCAGAAGCATGACAGGAATATTGATTTACTTACATGATAACCGTTGTGCCATTAGC
CTTGGACAATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTC
AGCATGGATGGTGACTTTGGTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGG
CTTTTGTTGGTCATGGACGTTGTTAGTGTTTTTCTCTCCCTTGAAATACATATTTTTTTC
CTGACTATTGCCTTGGACAGTTGGAGATCATTGTGATGTTGGTGTAATTGGGCTTACTAA
GTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAATTCA
GAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATCTGGACAATCTTGGTTTGCAG
CCCAAAGTAAAGGGCAAGTGTACGAATTTAGCCACAAAAGCGACGCCAACGAGGATCGCC
ATCGACGGTGACCGCTGCTCCATCGATCCTTCTTCCCCCGTTTGCTACTCTCACTTCACA
GCCACAATCATGTCTTCCGCAGTGTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGC
TACTTGCCTGTGCCAATCACACTTGCGACAGCATATAAGATGCAGCATGGAGATAATCTG
AAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACA
CTGTACATGACGACAGGATGGAGATAATCTGAAGTTAGAAACTGGAGAAACGATTCTTTT
CAGGATGCCATCAAGGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAG
ATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCTAACAAAAGGTCCCCTGATCCATC
AGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTTCTAGCAAAAGCGTTCCATT
TCTGAGGAATGGAACAGGCAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACC
AGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTTTCTAGAAG
AATCAAACAAGTTCTATGTCGTGCGTATGAACAGAACATTCATGGAACAGGACAGAGTGT
ACTTTGCGACCGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCAAGACAGCAA
ACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAACATCAGGGTGGTTAGCTTT
GCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCACTTTTTAGGACAAGTCAC
CTCACGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCTTCAGTAGTCGCTGCTATT
ATCTACACTGGAACAACTACTATAATTCTCTATTATCCTTTGCTTGCGGTCTATCTAACT
TCACTTGCTCTGTAAGCACGTGACCTATAACTGCTTATCATTGTCCTCAGCTCCTTTTGT
TATCCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAACAGCTGGCTTGTTATACT
ACAGGTACTATGGTACTATTTGTTG

consensusID : consensus_10713#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2281
fasta sequence

                              [CGCCTCTGCGGCTGGGTCGCTCTCCACCGCGCCCACGCCGGCCTCACCTTCCTCATTCTGCGACCACTCTGGCATGGTCTTGGTACGGATTCCCAATAAACTGATGTTCGGTGATCTAATAAGTGAAGGCAAAATGAAGTAATATAATCGCATCAATTTGTAATGTTGTGGGGAGTTGATTTTGTTTTTGTTTTTCTGTACTGATGAGGTGTAGGCTAGCAGCGCCCGCCAACCGGCACTGAGGTAAGGAGTTCCACAACCACAGCACTCAGATGCAAATAATGGGCATGCCTCTGTCTAAGCTGCTAAGTAGAGAAGCACACTGCAAATAAGAGCTGAGTGAGCTAGGACCTGCCAATCTCTGTTTTCTCTTGTTCTTGGATTGCAATTTTTGATTTTAGATTGGATATTTGAGAGAATGCATAGGAAAGGGAAAGGAAAAGGGAAAGGGATGCCTTTACATTATACTTATCTTTCCTTACGTTACCCATCTCAGATGTGGTCATAGTAATATACTTTTTCCTTTGTGCCACTTATCTTTCCTTTCTATGCTCCACTGATATATCAGCTGGTCCATGTGCCATTTGGTGATTGCTGCTTACATAGTTGTTTTTATTTATCTCCGTACGCTATGTGATGTTATATTCCCTTCTCGATATATGTTCAGCCATTCAATCAGTTTTGATTAGTTAATGTTCATGCATCAGATTTGTTAATACAAAATGTTCTCTGATCTGGTATTCAGCTTGGCTACCAGTACATGTTACAAGTTCAATCCTCCACAAGCAATTGAGAAAGGTTGCAGGTGAGAGGCAAGCAGAAGCATGACAGGAATATTGATTTACTTACATGATAACCGTTGTGCCATTAGTTTCATCTGCATGTAACCTAAATAATTTCACGGTGCTCAACTGGATCACTGCGGGTGTAGTTTCATTGCTCATTTCCCATCCTTGGACAATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGATGGTGACTTTGCTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTTGGTCATGGACGTTCCTTGGACAGTTGGAGATCATTGCGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAATTCAGAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATATGGCCACAATCATGTCTTCCGCAGTTTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGCATATAAGATGCAGCGTGGAGATAATCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACACTGTACATGACGACATGATGGAAATAATTTGTAGAGGCAACTGGATTAGAAACTGGAGAAACGATTCTTTTCTGGATGCCATCACAGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCGAACAAAAGGCCCCTTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTCCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGGCAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTTTCTAGAAGAATCAAACA-AGTTCTATGTCGTGCGTATGAACAGAACATTCATGGAACAGGACA-GAGTGTACTTTGCGACCGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCA-AGACAGCAA-ACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAACATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCACTTTTTAGGACAAGTCACCTCACGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCTTCAGTAGTCGCTGCTATTATCTACACTGGAACAACTACTATAATTCTCTATTATCCTTTGCTTGCGGTCTATCTAACTTCACTTGCTCTGTAAGCACGTGACCTATAACTGCTTATCATTGTCCTCAGCTCCTTTTGTTATCCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAACAGCTGGCTTGTTATACTACAGCTACTATGGTAAAAAAAAAAAAAAAA]

[+] EMBL AK120410             [CGCCTCTGCGGCTGGGTCGCTCTCCACCGCGCCCACGCCGGCCTCACCTTCCTCATTCTGCGACCACTCTGGCATGGTCTTGGTACGGATTCCCAATAAACTGATGTTCGGTGATCTAATAAGTGAAGGCAAAATGAAGTAATATAATCGCATCAATTTGTAATGTTGTGGGGAGTTGATTTTGTTTTTGTTTTTCTGTACTGATGAGGTGTAGGCTAGCAGCGCCCGCCAACCGGCACTGAGGTAAGGAGTTCCACAACCACAGCACTCAGATGCAAATAATGGGCATGCCTCTGTCTAAGCTGCTAAGTAGAGAAGCACACTGCAAATAAGAGCTGAGTGAGCTAGGACCTGCCAATCTCTGTTTTCTCTTGTTCTTGGATTGCAATTTTTGATTTTAGATTGGATATTTGAGAGAATGCATAGGAAAGGGAAAGGAAAAGGGAAAGGGATGCCTTTACATTATACTTATCTTTCCTTACGTTACCCATCTCAGATGTGGTCATAGTAATATACTTTTTCCTTTGTGCCACTTATCTTTCCTTTCTATGCTCCACTGATATATCAGCTGGTCCATGTGCCATTTGGTGATTGCTGCTTACATAGTTGTTTTTATTTATCTCCGTACGCTATGTGATGTTATATTCCCTTCTCGATATATGTTCAGCCATTCAATCAGTTTTGATTAGTTAATGTTCATGCATCAGATTTGTTAATACAAAATGTTCTCTGATCTGGTATTCAGCTTGGCTACCAGTACATGTTACAAGTTCAATCCTCCACAAGCAATTGAGAAAGGTTGCAGGTGAGAGGCAAGCAGAAGCATGACAGGAATATTGATTTACTTACATGATAACCGTTGTGCCATTAGTTTCATCTGCATGTAACCTAAATAATTTCACGGTGCTCAACTGGATCACTGCGGGTGTAGTTTCATTGCTCATTTCCCATCCTTGGACAATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGATGGTGACTTTGCTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTTGGTCATGGACGTTCCTTGGACAGTTGGAGATCATTGCGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAATTCAGAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATATGGCCACAATCATGTCTTCCGCAGTTTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGCATATAAGATGCAGCGTGGAGATAATCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACACTGTACATGACGACATGATGGAAATAATTTGTAGAGGCAACTGGATTAGAAACTGGAGAAACGATTCTTTTCTGGATGCCATCACAGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCGAACAAAAGGCCCCTTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTCCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGGCAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTTTCTAGAAGAATCAAACA AGTTCTATGTCGTGCGTATGAACAGAACATTCATGGAACAGGACA GAGTGTACTTTGCGACCGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCA AGACAGCAA ACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAACATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCACTTTTTAGGACAAGTCACCTCACGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCTTCAGTAGTCGCTGCTATTATCTACACTGGAACAACTACTATAATTCTCTATTATCCTTTGCTTGCGGTCTATCTAACTTCACTTGCTCTGTAAGCACGTGACCTATAACTGCTTATCATTGTCCTCAGCTCCTTTTGTTATCCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAACAGCTGGCTTGTTATACTACAGCTA                       ]
[-] EMBL CB630299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCGAACAAAAGGCCCCTTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTCCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGGCAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTTTCTAGAAGAATCAAACA AGTTCTATGTCGTGCGTATGAACAGAACATTCATGGAACAGGACA GAGTGTACTTTGCGACCGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCA AGACAGCAA ACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAACATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCACTTTTTAGGACAAGTCACCTCACGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCTTCAGTAGTCGCTGCTATTATCTACACTGGAACAACTACTATAATTCTCTATTATCCTTTGCTTGCGGTCTATCTAACTTCACTTGCTCTGTAAGCACGTGACCTATAACTGCTTATCATTGTCCTCAGCTCCTTTTGTTATCCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAACAGCTGGCTTGTTATACTACAGCTACTATGGTAAAAAAAAAAAAAAAA]
[+] EMBL BI813140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTGAATTGAAGAGTTACATCAAAGAGATT CAGATTTTCTAGAAGAATCAAACACAGTTCTATGTCGTGCGTATGAACAGAACATTCATGGAACAGGACACGAGTGTACTTTGCGACCGAGTTTTCAAAGAAATACCTTGTGAACTTGGTTCGAGGCACAGACACCAACAC TTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAACATCAGGGTGGTTAGCTTTGCAGCAGCC ACAGCATCAACTTACAC ATCTGCATCTTCCACTTTTTAGGACAAGTCACCTCACGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCTTCAGTAGTCGCTGCTATTATCTACACTGGAACAACTACTATAATTCTCTATTATCCTTTGCTTGCGGTCTATCTAACTTCACTTGCTCTGTAAGCACGTGACCTATAACTGCTTATCATTGTCCTCAGCTCCTTTTGTTATCCATAAGCTGAGTGAAC ATTAACCCCTTTATGTACCAACAGCTGGCTTGTTATACTACAaaa                        ]




>consensus_10713#1
CGCCTCTGCGGCTGGGTCGCTCTCCACCGCGCCCACGCCGGCCTCACCTTCCTCATTCTG
CGACCACTCTGGCATGGTCTTGGTACGGATTCCCAATAAACTGATGTTCGGTGATCTAAT
AAGTGAAGGCAAAATGAAGTAATATAATCGCATCAATTTGTAATGTTGTGGGGAGTTGAT
TTTGTTTTTGTTTTTCTGTACTGATGAGGTGTAGGCTAGCAGCGCCCGCCAACCGGCACT
GAGGTAAGGAGTTCCACAACCACAGCACTCAGATGCAAATAATGGGCATGCCTCTGTCTA
AGCTGCTAAGTAGAGAAGCACACTGCAAATAAGAGCTGAGTGAGCTAGGACCTGCCAATC
TCTGTTTTCTCTTGTTCTTGGATTGCAATTTTTGATTTTAGATTGGATATTTGAGAGAAT
GCATAGGAAAGGGAAAGGAAAAGGGAAAGGGATGCCTTTACATTATACTTATCTTTCCTT
ACGTTACCCATCTCAGATGTGGTCATAGTAATATACTTTTTCCTTTGTGCCACTTATCTT
TCCTTTCTATGCTCCACTGATATATCAGCTGGTCCATGTGCCATTTGGTGATTGCTGCTT
ACATAGTTGTTTTTATTTATCTCCGTACGCTATGTGATGTTATATTCCCTTCTCGATATA
TGTTCAGCCATTCAATCAGTTTTGATTAGTTAATGTTCATGCATCAGATTTGTTAATACA
AAATGTTCTCTGATCTGGTATTCAGCTTGGCTACCAGTACATGTTACAAGTTCAATCCTC
CACAAGCAATTGAGAAAGGTTGCAGGTGAGAGGCAAGCAGAAGCATGACAGGAATATTGA
TTTACTTACATGATAACCGTTGTGCCATTAGTTTCATCTGCATGTAACCTAAATAATTTC
ACGGTGCTCAACTGGATCACTGCGGGTGTAGTTTCATTGCTCATTTCCCATCCTTGGACA
ATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGA
TGGTGACTTTGCTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTT
GGTCATGGACGTTCCTTGGACAGTTGGAGATCATTGCGATGTTGGTGTAATTGGGCTTAC
TAAGTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAAT
TCAGAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATATGGCCACAATCATGTCT
TCCGCAGTTTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGCATATAAGA
TGCAGCGTGGAGATAATCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAA
TCAAGGAAGTAGCTAGCACACTGTACATGACGACATGATGGAAATAATTTGTAGAGGCAA
CTGGATTAGAAACTGGAGAAACGATTCTTTTCTGGATGCCATCACAGTCTAAAGCGTGTG
TTATGATACTGAACAGACAAGGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCT
CATCAGCGAACAAAAGGCCCCTTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTG
ACCATGCATCTCCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGGCAGTAACAAAA
GAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGT
TACATCAAAGAGATTGCAGATTTTCTAGAAGAATCAAACAAGTTCTATGTCGTGCGTATG
AACAGAACATTCATGGAACAGGACAGAGTGTACTTTGCGACCGAGTTTTCAAAGAAATAC
ATTGTGAACTTGGTTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCC
TCAACAACTTAACATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAA
TCTGCATCTTCCACTTTTTAGGACAAGTCACCTCACGCTCACCATAGATGCTCTGTGAAA
GTTACCTGCATCTTCAGTAGTCGCTGCTATTATCTACACTGGAACAACTACTATAATTCT
CTATTATCCTTTGCTTGCGGTCTATCTAACTTCACTTGCTCTGTAAGCACGTGACCTATA
ACTGCTTATCATTGTCCTCAGCTCCTTTTGTTATCCATAAGCTGAGTGAACAATTAACCA
CTTTATGTACAAACAGCTGGCTTGTTATACTACAGCTACTATGGTAAAAAAAAAAAAAAA
A

consensusID : consensus_10713#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 543
fasta sequence

                              [ATTGCGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAATTCAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATATGGCCACAATCATGTCTTCCGCAGTTTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGCATATAAGATGCAGCGTGGAGATAATCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACACTGTACATGACGACATGATGGAAATAATTTGTAGAGGCAACTGGATTAGAAACTGGAGAAACGATTCTTTTCTGGATGCCATCACAGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAGATGTCCAGTGANGNCCCCATCCAACAGCTCATCAGCGAACAAAAGGCCCCTTGATCCATCAGGTCAATTAACCNNNNNAAGCACATTTGACCATGCATCTCNTNNNNNNGCGTTCNNNTNCNNNNN]

[+] EMBL CF196978             [ATTGCGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAATTCAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATATGGCCACAATCATGTCTTCCGCAGTTTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGCATATAAGATGCAGCGTGGAGATAATCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACACTGTACATGACGACATGATGGAAATAATTTGTAGAGGCAACTGGATTAGAAACTGGAGAAACGATTCTTTTCTGGATGCCATCACAGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAGATGTCCAGTGANGNCCCCATCCAACAGCTCATCAGCGAACAAAAGGCCCCTTGATCCATCAGGTCAATTAACCNNNNNAAGCACATTTGACCATGCATCTCNTNNNNNNGCGTTCNNNTNCNNNNN]




>consensus_10713#2
ATTGCGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGGCTTCTTCCCT
GTTTTGACACCTTTTTGTTAGTATCAATTCAGAGAGACAATTTGCGTACATCCCTTGGAT
TTCATGATATGGCCACAATCATGTCTTCCGCAGTTTTCGCATCAATGAGGCTGAATGCAA
CAAATCAAAGCTACTTGCATATAAGATGCAGCGTGGAGATAATCTGAAGTTAAAAACTTC
CCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACACTGTACATGACGAC
ATGATGGAAATAATTTGTAGAGGCAACTGGATTAGAAACTGGAGAAACGATTCTTTTCTG
GATGCCATCACAGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAGATG
TCCAGTGANGNCCCCATCCAACAGCTCATCAGCGAACAAAAGGCCCCTTGATCCATCAGG
TCAATTAACCNNNNNAAGCACATTTGACCATGCATCTCNTNNNNNNGCGTTCNNNTNCNN
NNN

consensusID : consensus_10713#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 454
fasta sequence

                              [GCTGCAGCCGCTGCAGTGGCCTGCGAGGGACGCGCTGTGCGGCGAGCTCGGCGCCGGTGACGCCGGCCGCCGCGTGCGCCTCTGCGGCTGGGTCGCTCTCCACCGCGCCCACGCCGGCCTCACCTTCCTCACCCTTCGTGACCGATCCGGCACGGTCCAGGTGACAACTTTGCCAGAATATCCAGAAGTTTATGCTGTGGTGAACAAGCTAAGAGTAGAGTCGGTGGTTGCGGTCGAGGGGGTTGTTCGGTCACGCCCAACAGAAGCCATCAACACAGATATGAAGACTGGGGCTATAGAGGATGCTGCCGATAATATATATGTGCTGAACTCAATAACTCGTTCATTGCCTTTTCCAATCACCACTGCTGATACTGTAAAAGAGAAGTTTCCAGAAGAAATTAGACTGAGATTCCGGGTGCTGGACTTACGCCGACCACAAATGCAGTCGAAC]

[+] EMBL CB629023             [GCTGCAGCCGCTGCAGTGGCCTGCGAGGGACGCGCTGTGCGGCGAGCTCGGCGCCGGTGACGCCGGCCGCCGCGTGCGCCTCTGCGGCTGGGTCGCTCTCCACCGCGCCCACGCCGGCCTCACCTTCCTCACCCTTCGTGACCGATCCGGCACGGTCCAGGTGACAACTTTGCCAGAATATCCAGAAGTTTATGCTGTGGTGAACAAGCTAAGAGTAGAGTCGGTGGTTGCGGTCGAGGGGGTTGTTCGGTCACGCCCAACAGAAGCCATCAACACAGATATGAAGACTGGGGCTATAGAGGATGCTGCCGATAATATATATGTGCTGAACTCAATAACTCGTTCATTGCCTTTTCCAATCACCACTGCTGATACTGTAAAAGAGAAGTTTCCAGAAGAAATTAGACTGAGATTCCGGGTGCTGGACTTACGCCGACCACAAATGCAGTCGAAC]




>consensus_10713#3
GCTGCAGCCGCTGCAGTGGCCTGCGAGGGACGCGCTGTGCGGCGAGCTCGGCGCCGGTGA
CGCCGGCCGCCGCGTGCGCCTCTGCGGCTGGGTCGCTCTCCACCGCGCCCACGCCGGCCT
CACCTTCCTCACCCTTCGTGACCGATCCGGCACGGTCCAGGTGACAACTTTGCCAGAATA
TCCAGAAGTTTATGCTGTGGTGAACAAGCTAAGAGTAGAGTCGGTGGTTGCGGTCGAGGG
GGTTGTTCGGTCACGCCCAACAGAAGCCATCAACACAGATATGAAGACTGGGGCTATAGA
GGATGCTGCCGATAATATATATGTGCTGAACTCAATAACTCGTTCATTGCCTTTTCCAAT
CACCACTGCTGATACTGTAAAAGAGAAGTTTCCAGAAGAAATTAGACTGAGATTCCGGGT
GCTGGACTTACGCCGACCACAAATGCAGTCGAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10713#0      --------------------------------CAGTCCCCTCCTCCCTCTCGTTCATTGC 28
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      CGCCTCTGCGGCTGGGTCGCTCTCCACCGCGCCCACGCCGGCCTCACCTTCCTCATTCTG 60
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TCAGTATGTATCATCGAGAATGGTACGGATTCCCAATAAACTGATGTTGGGTGATCTAAT 88
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      CGACCACTCTGGCATGGTCTTGGTACGGATTCCCAATAAACTGATGTTCGGTGATCTAAT 120
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      AACTGAAGGCAAAATGAAGTAATATAATCGCATCAATTTGTAATGTTGTGGGGAGTTGAT 148
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      AAGTGAAGGCAAAATGAAGTAATATAATCGCATCAATTTGTAATGTTGTGGGGAGTTGAT 180
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TTTGTTTTTGTTTTTCTGTACTGATGAGGTGTAGGCTAGCAGCGCCCGCCAACCGGCACT 208
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      TTTGTTTTTGTTTTTCTGTACTGATGAGGTGTAGGCTAGCAGCGCCCGCCAACCGGCACT 240
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      GAGGTAAGGAGTTCCACAACCACAGCACTCAGATGCAAATAATGGGCATGCCTCTGTCTA 268
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      GAGGTAAGGAGTTCCACAACCACAGCACTCAGATGCAAATAATGGGCATGCCTCTGTCTA 300
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      AGCTACTAAGCAGAGAAGCACACTGCAAATAAGAGCTGAGTGAGCTGGGAGCTGCCAATC 328
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      AGCTGCTAAGTAGAGAAGCACACTGCAAATAAGAGCTGAGTGAGCTAGGACCTGCCAATC 360
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TCTGTTTTCTCTTTTTCTTGGATTGCAATTTTTGATTTTAGATTGGATATTTGAGAGAAT 388
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      TCTGTTTTCTCTTGTTCTTGGATTGCAATTTTTGATTTTAGATTGGATATTTGAGAGAAT 420
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      GCATAGGAAAGGGAAAGGAAAAGGGAAAGGGATGCCTTTACATTGTACTTATCTTTCCTT 448
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      GCATAGGAAAGGGAAAGGAAAAGGGAAAGGGATGCCTTTACATTATACTTATCTTTCCTT 480
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      ACGTTACCTATCTCAGATGTGGTCATAGTAATATACTTTTTTCTTTGTGCCACTTATCTT 508
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      ACGTTACCCATCTCAGATGTGGTCATAGTAATATACTTTTTCCTTTGTGCCACTTATCTT 540
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TCCTTTCTATGCTCCACTGATATATCAGCTGGTCCATGTGCCATTTGGTGATTGCTGCTT 568
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      TCCTTTCTATGCTCCACTGATATATCAGCTGGTCCATGTGCCATTTGGTGATTGCTGCTT 600
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      ACATAGTTATTTTTATTTATCTCCGTACGCTATGTGATGTTATATTCCCTTCTCGATATA 628
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      ACATAGTTGTTTTTATTTATCTCCGTACGCTATGTGATGTTATATTCCCTTCTCGATATA 660
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TGTTCAGCCATTCAATCAGTTTTGATTAGTTAATGTTCATGCATCAGATTTGTTAATACA 688
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      TGTTCAGCCATTCAATCAGTTTTGATTAGTTAATGTTCATGCATCAGATTTGTTAATACA 720
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      AAATGTTCTCTGATCTGGTATTCAGCTTGGCTACCAGTACATGTTACAAGTTCAATCTTC 748
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      AAATGTTCTCTGATCTGGTATTCAGCTTGGCTACCAGTACATGTTACAAGTTCAATCCTC 780
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      CACAAGCAATTGAGAAAGGTTGCAGGTGAGAGGCAAGCAGAAGCATGACAGGAATATTGA 808
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      CACAAGCAATTGAGAAAGGTTGCAGGTGAGAGGCAAGCAGAAGCATGACAGGAATATTGA 840
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TTTACTTACATGATAACCGTTGTGCCATTAGCCT---------------TGGACAATCGG 853
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      TTTACTTACATGATAACCGTTGTGCCATTAGTTTCATCTGCATGTAACCTAAATAATTTC 900
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      AGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGATGGTG 913
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      ACGGTGCTCAACTGGATCACTGCGGGTGTAGTTTCATTGCTCATTTCCCATCCTTGGACA 960
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      ACTTTGGTCCATTGC--TTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTTGGT 971
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      ATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGA 1020
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      CATGGACGTTG---------TTAGTGTTTTTCTCTCCCTTGAAATACATATTTTTTTCCT 1022
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      TGGTGACTTTGCTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTT 1080
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      GACTATTG-----CCTTGGACAGTTGGAGATCATTGTGATGTTGGTGTAATTGGGCTTAC 1077
consensus_10713#2      --------------------------------ATTGCGATGTTGGTGTAATTGGGCTTAC 28
consensus_10713#1      GGTCATGGACGTTCCTTGGACAGTTGGAGATCATTGCGATGTTGGTGTAATTGGGCTTAC 1140
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TAAGTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAAT 1137
consensus_10713#2      TAAGTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAAT 88
consensus_10713#1      TAAGTGCTCTGGTACTCATGGGCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAAT 1200
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TCAGAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATCTGGACAATCTTGGTTTG 1197
consensus_10713#2      TCAGAGAG--ACAATTTGCGTACATCCCTTGGATTTCATGATATGG-------------- 132
consensus_10713#1      TCAGAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATATGG-------------- 1246
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      CAGCCCAAAGTAAAGGGCAAGTGTACGAATTTAGCCACAAAAGCGACGCCAACGAGGATC 1257
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      ------------------------------------------------------------
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      GCCATCGACGGTGACCGCTGCTCCATCGATCCTTCTTCCCCCGTTTGCTACTCTCACTTC 1317
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      ------------------------------------------------------------
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      ACAGCCACAATCATGTCTTCCGCAGTGTTCGCATCAATGAGGCTGAATGCAACAAA-TCA 1376
consensus_10713#2      ----CCACAATCATGTCTTCCGCAGTTTTCGCATCAATGAGGCTGAATGCAACAAA-TCA 187
consensus_10713#1      ----CCACAATCATGTCTTCCGCAGTTTTCGCATCAATGAGGCTGAATGCAACAAA-TCA 1301
consensus_10713#3      ---------GCTGCAGCCGCTGCAGTGGCC-TGCGAGGGACGCGCTGTGCGGCGAGCTCG 50
                                       *  * *****   *     *  ** **    ***  * *  ** 

consensus_10713#0      AAGCTACTTGCCTGTGCCAATCACACTTGCGACAGCATATAAGATGCAGCATGGAGATAA 1436
consensus_10713#2      AAGCTACTTGC-------------------------ATATAAGATGCAGCGTGGAGATAA 222
consensus_10713#1      AAGCTACTTGC-------------------------ATATAAGATGCAGCGTGGAGATAA 1336
consensus_10713#3      GCGCCGGTGAC--------------------GCCGGCCGCCGCGTGCGCCTCTGCGGCTG 90
                         **   *  *                                 ***  *   * *    

consensus_10713#0      TCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAG 1496
consensus_10713#2      TCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAG 282
consensus_10713#1      TCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAG 1396
consensus_10713#3      GGTCGCTCTCCACCGCGCCCACGCCGGCCTCACCTTCCTCACCCTTCGTGACCGATCCGG 150
                         *     *  *     **** * *      *      ***   *    **   * *  *

consensus_10713#0      CACACTGTACATGACGACAGGATGGAGATAATCTGAAG-----------TTAGAAACTGG 1545
consensus_10713#2      CACACTGTACATGACGACATGATGGAAATAATTTGTAGAGGCAACTGGATTAGAAACTGG 342
consensus_10713#1      CACACTGTACATGACGACATGATGGAAATAATTTGTAGAGGCAACTGGATTAGAAACTGG 1456
consensus_10713#3      CACGGTCCAGGTGACAACTTTGCCAGAATATCCAGAAGT----------TTATGCTGTGG 200
                       ***  *  *  **** **         ***    * **           ***     ***

consensus_10713#0      AGAAACGATTCTTTTCAGGAT--GCCATCAAGGTCTAAAGCGT-GTGTTATGATACTGAA 1602
consensus_10713#2      AGAAACGATTCTTTTCTGGAT--GCCATCACAGTCTAAAGCGT-GTGTTATGATACTGAA 399
consensus_10713#1      AGAAACGATTCTTTTCTGGAT--GCCATCACAGTCTAAAGCGT-GTGTTATGATACTGAA 1513
consensus_10713#3      TGAACAAGCTAAGAGTAGAGTCGGTGGTTGCGGTCGAGGGGGTTGTTCGGTCACGCCCAA 260
                        ***     *       *  *  *   *    *** *  * ** **    * *  *  **

consensus_10713#0      CAGACAAGGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCTAACAA 1662
consensus_10713#2      CAGACAAGGCCTTATTAGATGTCCAGTGANGNCCCCATCCAACAGCTCATCAGCGAACAA 459
consensus_10713#1      CAGACAAGGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCGAACAA 1573
consensus_10713#3      CAGA--AGCCATCAACACAGAT---ATGAAGACTGGGGCTATAGAGGATGCTGCCGATAA 315
                       ****  ** * * *  * *  *    *** * *     * *         * **  * **

consensus_10713#0      AAGGTCCCCTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTTC 1722
consensus_10713#2      AAGGCCCCTTGATCCATCAGGTCAATTAACCNNNNNAAGCACATTTGACCATGCATCTCN 519
consensus_10713#1      AAGGCCCCTTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTCC 1633
consensus_10713#3      TATATATG-TGCTGAACTCAATAACTCGTTCATTGCCTTTTCCAATCACCACTGCTGATA 374
                        *       ** *  *     * * *    *          *   * ****    *    

consensus_10713#0      TAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGGCAGTAACAAAAGAAAACCTAGCAG 1782
consensus_10713#2      TNNNNNN-GCGTTCNNNTNCNNNNN----------------------------------- 543
consensus_10713#1      TAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGGCAGTAACAAAAGAAAACCTAGCAG 1693
consensus_10713#3      CTGTAAAAGAGAAGTTTCCAGAAGAAATTAGACTGAGATTCCGGGTGCTGGACTTA--CG 432
                               * *                                                 

consensus_10713#0      ACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGA 1842
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      ACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGA 1753
consensus_10713#3      CCGACCACAAATGCAGTCGAAC-------------------------------------- 454
                                                                                   

consensus_10713#0      TTGCAGATTTTCTAGAAGAATCAAACAAGTTCTATGTCGTGCGTATGAACAGAACATTCA 1902
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      TTGCAGATTTTCTAGAAGAATCAAACAAGTTCTATGTCGTGCGTATGAACAGAACATTCA 1813
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TGGAACAGGACAGAGTGTACTTTGCGACCGAGTTTTCAAAGAAATACATTGTGAACTTGG 1962
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      TGGAACAGGACAGAGTGTACTTTGCGACCGAGTTTTCAAAGAAATACATTGTGAACTTGG 1873
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAAC 2022
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      TTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAAC 1933
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      ATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCA 2082
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      ATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCA 1993
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      CTTTTTAGGACAAGTCACCTCACGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCT 2142
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      CTTTTTAGGACAAGTCACCTCACGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCT 2053
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      TCAGTAGTCGCTGCTATTATCTACACTGGAACAACTACTATAATTCTCTATTATCCTTTG 2202
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      TCAGTAGTCGCTGCTATTATCTACACTGGAACAACTACTATAATTCTCTATTATCCTTTG 2113
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      CTTGCGGTCTATCTAACTTCACTTGCTCTGTAAGCACGTGACCTATAACTGCTTATCATT 2262
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      CTTGCGGTCTATCTAACTTCACTTGCTCTGTAAGCACGTGACCTATAACTGCTTATCATT 2173
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      GTCCTCAGCTCCTTTTGTTATCCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAA 2322
consensus_10713#2      ------------------------------------------------------------
consensus_10713#1      GTCCTCAGCTCCTTTTGTTATCCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAA 2233
consensus_10713#3      ------------------------------------------------------------
                                                                                   

consensus_10713#0      CAGCTGGCTTGTTATACTACAGGTACTATGGTACTATTTGTTG----- 2365
consensus_10713#2      ------------------------------------------------
consensus_10713#1      CAGCTGGCTTGTTATACTACAGCTACTATGGTAAAAAAAAAAAAAAAA 2281
consensus_10713#3      ------------------------------------------------