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Oryza sativa
cluster # 10729 cluster # 10729       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10729#0 length = 1414 sequences # 3  
consensus_10729#1 length = 1412 sequences # 3  
consensus_10729#2 length = 1377 sequences # 2  

consensusID : consensus_10729#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1414
fasta sequence
                              [CAGCTCTTCTCCTCCTTAATTTCAGAGCCTTAACCTCTCTCTTAATTTCAGTTTGTTTGTTCGTTCGTTCCCCCAAAAAATTTGGATCCGCCTCTGCAGATTGGTGCCTTCCTTCCGCTGGAGGCAACCCCCCCCCCCCTCCCTTGTACGCTTCGTCTTCGTCTCCGGCGACGAGCGGAAGCAAACCTTCTCCGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGCCCGCGCACCGTGTCGGCCTTCCTCGACAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTGGGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGTCACCAGGAACGTGCCTTGCCTAAGACGTGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCAAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAAGTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTTCATATTTTGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAGAATGCCACTAAAGCCTGAACTTGTGTTTGAAGATATCAGCCAAGATCATGCACGGAAGACGGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGCAAACATGCTGCTGTGATGAAAAAGATCATTGATGTTCTAATGTCTCAAGGAGTTGAACCAGAAGTTGACAAGCACCTTTTCATATTTTTGAAGTTTATGGCCTCAGTCATACCCACTATTGAATATGACTACACTATGGACTTCGATCTGGGCAGCACAAGCAGATGATTTGTTAATTGAAGGAAAGGGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCCCAAATAATCATTGCTTGTTGGAAAGAATTGTATATGCAATATGTGCGTGCATGTGTGCTCATTCGTTTGGAAAGTAACTGGAAACAATGCAGAAACATCAGGGCTGATTTGCCATGTACATGTAACACTACATACCCGTTTCACTTGAATTCGTTTGCCTTCCAGATTGAATCCATCTGTTCTTAGATACACGT]

[+] EMBL CB643215             [CAGCTCTTCTCCTCCTTAATTTCAGAGCCTTAACCTCTCTCTTAATTTCAGTTTGTTTGTTCGTTCGTTCCCCCAAAAAATTTGGATCCGCCTCTGCAGATTGGTGCCTTCCTTCCGCTGGAGGCAACCCCCCCCCCCCTCCCTTGTACGCTTCGTCTTCGTCTCCGGCGACGAGCGGAAGCAAACCTTCTCCGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGCCCGCGCACCGTGTCGGCCTTCCTCGACAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTGGGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGTCACCAGGAACGTGCCTTGCCTAAGACGTGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCAAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAAGTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTTCATATTTTGTCGCAGAAGAGCCTGAAGATGACAACATCCCTCGTACTAGGACATATGACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK067737             [                                                         TGTTCGTTCGTTCCCCCAAAAAATTTGGATCCGCCTCTGCAGATTGGTGCCTTCCTTCCGCTGGAGGCAA CCCCCCCCCCCTCCCTTGTACGCTTCGTCTTCGTCTCCGGCGACGAGCGGAAGCAAACCTTCTCCGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGCCCGCGCACCGTGTCGGCCTTCCTCGACAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTGGGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGTCACCAGGAACGTGCCTTGCCTAAGACGTGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCAAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAAGTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTTCATATTTTGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAGAATGCCACTAAAGCCTGAACTTGTGTTTGAAGATATCAGCCAAGATCATGCACGGAAGACGGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGCAAACATGCTGCTGTGATGAAAAAGATCATTGATGTTCTAATGTCTCAAGGAGTTGAACCAGAAGTTGACAAGCACCTTTTCATATTTTTGAAGTTTATGGCCTCAGTCATACCCACTATTGAATATGACTACACTATGGACTTCGATCTGGGCAGCACAAGCAGATGATTTGTTAATTGAAGGAAAGGGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCCCAAATAATCATTGCTTGTTGGAAAGAATTGTATATGCAATATGTGCGTGCATGTGTGCTCATTCGTTTGGAAAGTAACTGGAAACAATGCAGAAACATCAGGGCTGATTTGCCATGTACATGTAACACTACATACCCGTTTCACTTGAATTCGTTTGCCTTCCAGATTGAATCCATCTGTTCTTAGATACACGT]
[-] EMBL CB643216             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATATACCAGACATGGACTCTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTTCATATTTTGTTGCAGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGACAAATATTGCCAAACCCCCCGTGTCTGGCTTACCGGATATGATGAGTCAAGAATGCCCCTAAAGCCTGAACTTGTGTTTGAAGATATCAGCCAAGATCATGCCCGGAAGACGGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGCAAACATGCTGCTGTGATGAAAAAGATCATTGATGTTTTAATGTCTCAAGGAGTTGAACCAGAAGTTGACAAGTACCTTTTCATATTTTTGAAGTTTATGGCCTCAGTCATACCCACTATTGAATATGATTACCCTATGGACTTCGATCTGGGCAGCACAAGCAGATGATTTGTTAATTGAAGGAAAGGGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCCCAAATAATCATTGCTTGTTGGAAAGAATTGTATATGCAATATGTGCGTGCATGTGTGCTCATTTGTTTGGAAAGTAACTGGAAACAATGCAGAAACATCAGGGCTGATTTGCCATGTTCATGTAACAATACATACCCGTTTCACTTGAATTCGTTTGCCT                                  ]


>consensus_10729#0 CAGCTCTTCTCCTCCTTAATTTCAGAGCCTTAACCTCTCTCTTAATTTCAGTTTGTTTGT TCGTTCGTTCCCCCAAAAAATTTGGATCCGCCTCTGCAGATTGGTGCCTTCCTTCCGCTG GAGGCAACCCCCCCCCCCCTCCCTTGTACGCTTCGTCTTCGTCTCCGGCGACGAGCGGAA GCAAACCTTCTCCGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACA AGGGGACGGTGGAGCGGGTCACGGGCCCGCGCACCGTGTCGGCCTTCCTCGACAAGGGCG TCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCCACCT GGTCCTGGGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCACCTGACAAGCAAT TTCTCGTCACCAGGAACGTGCCTTGCCTAAGACGTGCTGTTTCGCTTGAAGAAGAGTATG ATGCAGCAGGAGCTGAGGTAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCA CACATGGAGTGCAAGCATCAAAGCAAGAAGAGGAGGAAGACATACCATCGATGGATACAT TGGATATAGGGAAAACTGAAGGGATAAAGTCTATTCCCTCATATTTCAGTGCTGGTAAGA AGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACTCAGGGAATGATT CAGTGGCTACCGCTCAACCTTCATATTTTGTCGCAGAAGAGCCTGAAGATGACAACATCC TTCGTACTAGGACATATGACGTTAGCATCACATATGACAAATATTACCAAACCCCACGTG TCTGGCTTACCGGATATGATGAGTCAAGAATGCCACTAAAGCCTGAACTTGTGTTTGAAG ATATCAGCCAAGATCATGCACGGAAGACGGTGACTATTGAAGACCATCCTCACTTGTCAG CAGGCAAGCATGCTTCAGTGCATCCATGCAAACATGCTGCTGTGATGAAAAAGATCATTG ATGTTCTAATGTCTCAAGGAGTTGAACCAGAAGTTGACAAGCACCTTTTCATATTTTTGA AGTTTATGGCCTCAGTCATACCCACTATTGAATATGACTACACTATGGACTTCGATCTGG GCAGCACAAGCAGATGATTTGTTAATTGAAGGAAAGGGAAAGATCCTGTAGAAGGTGTAC CAAGGCTTATCATGGTGCCCCAAATAATCATTGCTTGTTGGAAAGAATTGTATATGCAAT ATGTGCGTGCATGTGTGCTCATTCGTTTGGAAAGTAACTGGAAACAATGCAGAAACATCA GGGCTGATTTGCCATGTACATGTAACACTACATACCCGTTTCACTTGAATTCGTTTGCCT TCCAGATTGAATCCATCTGTTCTTAGATACACGT



consensusID : consensus_10729#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1412
fasta sequence
                              [ACCGTCTCCGGCGACGAGCGGAAGCAACCTTCTCCGGCGAGCGGAGGCAACCCTGGGGGGCTAGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGGCCGCGCACCGTGTCGGCGTTCCTCGAGAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTGGGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCTCCCGACAAGCAATTCCTCGTCACCAGGAACGTGCCTTGCGTAAGACGCGCTGTCTCACTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCCAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAACTCTATTCCCTCATACTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACACAGGGAATGATTCAGTGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGATAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAGAATGCCATTAAAGCCTGAACTTGTGTTTGAAGATATCAG-CAAGACCATGCGCGGAAGACGGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGCAAACACGCTGCTGTGATGAAAAAGATCAT-TGATGTTCTAATGTCTCGAGGAGTTGAACCAGAAGTTGACAAGTAACTTTTCATATTTTTGAAGTTTATGGCCCCAGTCATACCCACTATTGAATATGACTACACTATGGACTTCGATCTGGGCAGTACAAGCAGATGATTTGTTAATTGAAGGAAAGTGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCTAATCATTGCTTGGTGGAAAGGGGGGTATATGCAATACGTGCGTGCATGTCTGCTCATTCGTTTGGAAAGTAACTGTAAACTCTGCAGATTCAAAGGTACATGTAACACTACATACCCGTTTCACTTGAATTCGTTTGGCTTCAAAANTANACANNNNATCCAAAATATAATTAATTATTTTGAGGAGGGAATCGTTTCCAACTCCTCCTCTTGCTCTTTTTTTTACCGCCACCCATTTCCCCTTTTTTTTTAATCTTCTTTTTCGGCGATCGTCTCCGTTACCTTGCATGCATCGACTTGGCGGACCGCCTCATTCAACCTACTATTTCCATCTTTTTTACTCTCTACCACCCT]

[+] EMBL CB680869             [ACCGTCTCCGGCGACGAGCGGAAGCAACCTTCTCCGGCGAGCGGAGGCAACCCTGGGGGGCTAGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGGCCGCGCACCGTGTCGGCGTTCCTCGAGAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTGGGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCTCCCGACAAGCAATTCCTCGTCACCAGGAACGTGCCTTGCGTAAGACGCGCTGTCTCACTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCCAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAACTCTATTCCCTCATACTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACACAGGGAATGATTCAGTGAAGAGCCTGAAGATGACAACATCCTTCGTACTACGACATATGACGTTAGCATCACATATGATAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB680870             [                                                                                                                                                                                                                                                                                                                                                                                                    GACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCCAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAACTCTATTCCCTCATACTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACACAGGGAATGATTCAGTGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGATAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAGAATGCCATTAAAGCCTGAACTTGTGTTTGAAGATATCAG CAAGACCATGCGCGGAAGACGGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGCAAACACGCTGCTGTGATGAAAAAGATCAT TGATGTTCTAATGTCTCGAGGAGTTGAACCAGAAGTTGACAAGTAACTTTTCATATTTTTGAAGTTTATGGCCCCAGTCATACCCACTATTGAATATGACTACACTATGGACTTCGATCTGGGCAGTACAAGCAGATGATTTGTTAATTGAAGGAAAGTGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCTAATCATTGCTTGGTGGAAAGGGGGGTATATGCAATACGTGCGTGCATGTCTGCTCATTCGTTTGGAAAGTAACTGTAAACTCTGCAGATTCAAAGGTACATGTAACA                                                                                                                                                                                                                                                       ]
[+] EMBL CA757837             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGAGGATATACCAGACATGGACACTTATGAAGACACAGGGAATGATTCAGTGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGATAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAGAATGCCATTAAAGCCTGAAGTTGTGTTTGAAGATATCAGCCAAGACCATGCGCGGAAGACGGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGCAAACACGCTGCTGTGATGAAAAAGATCATNTGATGTTCTAATGTCTCGAGGAGTTGAACCAGAAGTTGACAAGTAACTTTTCATATTTTTGAAGTTTATGGCCTCAGTCATACCCACTATTGAATATGACTACACTATGGACTTCGATCTGGGCAGTACAAGCAGATGATTTGTTAATTGAAGGAAAGTG  AGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCTAATCATTGCTTGGTGGAAAGATTTGTATATGCAATACGTGCGTGCATGTCTGCTCATTCGTTTGGAAAGTAACTGTAAACTCTGCAGAAACATCAGTACATGTAACACTACATACCCGTTTCACTTGAATTCGTTTGGCTTCAAAANTANACANNNNATCCAAAATATAATTAATTATTTTGAGGAGGGAATCGTTTCCAACTCCTCCTCTTGCTCTTTTTTTTACCGCCACCCATTTCCCCTTTTTTTTTAATCTTCTTTTTCGGCGATCGTCTCCGTTACCTTGCATGCATCGACTTGGCGGACCGCCTCATTCAACCTACTATTTCCATCTTTTTTACTCTCTACCACCCT]


>consensus_10729#1 ACCGTCTCCGGCGACGAGCGGAAGCAACCTTCTCCGGCGAGCGGAGGCAACCCTGGGGGG CTAGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGT GGAGCGGGTCACGGGGCCGCGCACCGTGTCGGCGTTCCTCGAGAAGGGCGTCCTCTCCGT CCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTGGGA GGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCTCCCGACAAGCAATTCCTCGTCAC CAGGAACGTGCCTTGCGTAAGACGCGCTGTCTCACTTGAAGAAGAGTATGATGCAGCAGG AGCTGAGGTAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGT GCAAGCATCAAAGCCAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGG GAAAACTGAAGGGATAAACTCTATTCCCTCATACTTCAGTGCTGGTAAGAAGGCTGAAGA AGAGGAGGATATACCAGACATGGACACTTATGAAGACACAGGGAATGATTCAGTGAAGAG CCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGATAAA TATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAGAATGCCATTAAAG CCTGAACTTGTGTTTGAAGATATCAGCAAGACCATGCGCGGAAGACGGTGACTATTGAAG ACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGCAAACACGCTGCTG TGATGAAAAAGATCATTGATGTTCTAATGTCTCGAGGAGTTGAACCAGAAGTTGACAAGT AACTTTTCATATTTTTGAAGTTTATGGCCCCAGTCATACCCACTATTGAATATGACTACA CTATGGACTTCGATCTGGGCAGTACAAGCAGATGATTTGTTAATTGAAGGAAAGTGAAAG ATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCTAATCATTGCTTGGTGGAAAGGG GGGTATATGCAATACGTGCGTGCATGTCTGCTCATTCGTTTGGAAAGTAACTGTAAACTC TGCAGATTCAAAGGTACATGTAACACTACATACCCGTTTCACTTGAATTCGTTTGGCTTC AAAANTANACANNNNATCCAAAATATAATTAATTATTTTGAGGAGGGAATCGTTTCCAAC TCCTCCTCTTGCTCTTTTTTTTACCGCCACCCATTTCCCCTTTTTTTTTAATCTTCTTTT TCGGCGATCGTCTCCGTTACCTTGCATGCATCGACTTGGCGGACCGCCTCATTCAACCTA CTATTTCCATCTTTTTTACTCTCTACCACCCT



consensusID : consensus_10729#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1377
fasta sequence
                              [TCCTTCCGCTGGAGGCAACCCCCCCCCCCCTCCCTTGTACGCTTCGTCTTCGTCTCCGGCGACGAGCGGAAGCAAACCTTCTCCGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGCCCGCGCACCGTGTCGGCCTTCCTCGACAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTGGTAGCTCTCTCCTCCCCTCCGTTGCTCCCCCTCAATTGCTGGGTTTGGGTTTGGGTTTGGGTGGCGTCTCATCGATCCCCCTGTGTAGGGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGTCACCAGGAACGTGCCTTGCCTAAGACGTGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCAAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAAGTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTTCATATTTTGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAGAATGCCACTAAAGCCTGAACTTGTGTTTGAAGATATCAGCCAAGATCATGCACGGAAGACGGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGCAAACATGCTGCTGTGATGAAAAAGATCATTGATGTTTTAATGTCTCAAGGAGTTGAACCAGAAGTTGACAAGTACCTTTTCATATTTTTGAAGTTTATGGCCTCAGTCATACCCACTATTGAATATGACTACACTATGGACTTCGATTTGGGCAGCACAAGCAGATGATTTGTTAATTGAAGGAAAGGGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCCCAAATAATCATTGCTTGTTGGAAAGAATTGTATATGCAATATGTGCGTGCATGTGTGCTCATTCGTTTGGAAAGTAACTGGAAACAATGCAGAAACATCAGGGCTGATTTGCCATGTACATGTAACACTACATAAAGGTTTCACTTGAATTCGTTTGCCTTCCAGATGACAAAAAAGG]

[+] EMBL CB682487             [TCCTTCCGCTGGAGGCAACCCCCCCCCCCCTCCCTTGTACGCTTCGTCTTCGTCTCCGGCGACGAGCGGAAGCAAACCTTCTCCGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGCCCGCGCACCGTGTCGGCCTTCCTCGACAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTGGTAGCTCTCTCCTCCCCTCCGTTGCTCCCCCTCAATTGCTGGGTTTGGGTTTGGGTTTGGGTGGCGTCTCATCGATCCCCCTGTGTAGGGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGTCACCAGGAACGTGCCTTGCCTAAGACGTGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCAAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAAGTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTTCATATTTTGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB682488             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTTCATATTTTGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAGAATGCCACTAAAGCCTGAACTTGTGTTTGAAGATATCAGCCAAGATCATGCACGGAAGACGGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGCAAACATGCTGCTGTGATGAAAAAGATCATTGATGTTTTAATGTCTCAAGGAGTTGAACCAGAAGTTGACAAGTACCTTTTCATATTTTTGAAGTTTATGGCCTCAGTCATACCCACTATTGAATATGACTACACTATGGACTTCGATTTGGGCAGCACAAGCAGATGATTTGTTAATTGAAGGAAAGGGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCCCAAATAATCATTGCTTGTTGGAAAGAATTGTATATGCAATATGTGCGTGCATGTGTGCTCATTCGTTTGGAAAGTAACTGGAAACAATGCAGAAACATCAGGGCTGATTTGCCATGTACATGTAACACTACATAAAGGTTTCACTTGAATTCGTTTGCCTTCCAGATGACAAAAAAGG]


>consensus_10729#2 TCCTTCCGCTGGAGGCAACCCCCCCCCCCCTCCCTTGTACGCTTCGTCTTCGTCTCCGGC GACGAGCGGAAGCAAACCTTCTCCGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTA CGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGCCCGCGCACCGTGTCGGCCTTCCT CGACAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAA GTGCCCCACCTGGTCCTGGTAGCTCTCTCCTCCCCTCCGTTGCTCCCCCTCAATTGCTGG GTTTGGGTTTGGGTTTGGGTGGCGTCTCATCGATCCCCCTGTGTAGGGAGGCGGGCGATC CGAGCAAGAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGTCACCAGGAACGTGC CTTGCCTAAGACGTGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAG TTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAA AGCAAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAG GGATAAAGTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATA TACCAGACATGGACACTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTT CATATTTTGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACG TTAGCATCACATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATG AGTCAAGAATGCCACTAAAGCCTGAACTTGTGTTTGAAGATATCAGCCAAGATCATGCAC GGAAGACGGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGC ATCCATGCAAACATGCTGCTGTGATGAAAAAGATCATTGATGTTTTAATGTCTCAAGGAG TTGAACCAGAAGTTGACAAGTACCTTTTCATATTTTTGAAGTTTATGGCCTCAGTCATAC CCACTATTGAATATGACTACACTATGGACTTCGATTTGGGCAGCACAAGCAGATGATTTG TTAATTGAAGGAAAGGGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCCC AAATAATCATTGCTTGTTGGAAAGAATTGTATATGCAATATGTGCGTGCATGTGTGCTCA TTCGTTTGGAAAGTAACTGGAAACAATGCAGAAACATCAGGGCTGATTTGCCATGTACAT GTAACACTACATAAAGGTTTCACTTGAATTCGTTTGCCTTCCAGATGACAAAAAAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10729#0      CAGCTCTTCTCCTCCTTAATTTCAGAGCCTTAACCTCTCTCTTAATTTCAGTTTGTTTGT 60
consensus_10729#2      ------------------------------------------------------------
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      TCGTTCGTTCCCCCAAAAAATTTGGATCCGCCTCTGCAGATTGGTGCCTTCCTTCCGCTG 120
consensus_10729#2      -------------------------------------------------TCCTTCCGCTG 11
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GAGGCAACCCCCCCCCCCCTCCCTTGTACGCTTCGTCTTCGTCTCCGGCGACGAGCGGAA 180
consensus_10729#2      GAGGCAACCCCCCCCCCCCTCCCTTGTACGCTTCGTCTTCGTCTCCGGCGACGAGCGGAA 71
consensus_10729#1      -------------ACCGTCTCCGGCG-ACGAGCGGAAGCAACCTTCTCCGGCGAGCGGAG 46
                                     **  ****   * ***    *       ** *  ** ******** 

consensus_10729#0      GCAAACCTTC----TCCGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTC 236
consensus_10729#2      GCAAACCTTC----TCCGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTC 127
consensus_10729#1      GCAACCCTGGGGGGCTAGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTACGAGCTC 106
                       **** ***         *******************************************

consensus_10729#0      TACAAGGGGACGGTGGAGCGGGTCACGGGCCCGCGCACCGTGTCGGCCTTCCTCGACAAG 296
consensus_10729#2      TACAAGGGGACGGTGGAGCGGGTCACGGGCCCGCGCACCGTGTCGGCCTTCCTCGACAAG 187
consensus_10729#1      TACAAGGGGACGGTGGAGCGGGTCACGGGGCCGCGCACCGTGTCGGCGTTCCTCGAGAAG 166
                       ***************************** ***************** ******** ***

consensus_10729#0      GGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCC 356
consensus_10729#2      GGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCC 247
consensus_10729#1      GGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAAGTGCCCC 226
                       ************************************************************

consensus_10729#0      ACCTGGTCCTGG------------------------------------------------ 368
consensus_10729#2      ACCTGGTCCTGGTAGCTCTCTCCTCCCCTCCGTTGCTCCCCCTCAATTGCTGGGTTTGGG 307
consensus_10729#1      ACCTGGTCCTGG------------------------------------------------ 238
                       ************                                                

consensus_10729#0      ----------------------------------------GAGGCGGGCGATCCGAGCAA 388
consensus_10729#2      TTTGGGTTTGGGTGGCGTCTCATCGATCCCCCTGTGTAGGGAGGCGGGCGATCCGAGCAA 367
consensus_10729#1      ----------------------------------------GAGGCGGGCGATCCGAGCAA 258
                                                               ********************

consensus_10729#0      GAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGTCACCAGGAACGTGCCTTGCCT 448
consensus_10729#2      GAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGTCACCAGGAACGTGCCTTGCCT 427
consensus_10729#1      GAGGAAGCCGTATCTCCCTCCCGACAAGCAATTCCTCGTCACCAGGAACGTGCCTTGCGT 318
                       ****************** ** *********** ************************ *

consensus_10729#0      AAGACGTGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGG 508
consensus_10729#2      AAGACGTGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGG 487
consensus_10729#1      AAGACGCGCTGTCTCACTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGG 378
                       ****** ***** ** ********************************************

consensus_10729#0      TGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCAAGA 568
consensus_10729#2      TGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCAAGA 547
consensus_10729#1      TGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCCAGA 438
                       ******************************************************** ***

consensus_10729#0      AGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAA 628
consensus_10729#2      AGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAA 607
consensus_10729#1      AGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATAAA 498
                       ************************************************************

consensus_10729#0      GTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGA 688
consensus_10729#2      GTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGA 667
consensus_10729#1      CTCTATTCCCTCATACTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGA 558
                        ************** ********************************************

consensus_10729#0      CATGGACACTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTTCATATTT 748
consensus_10729#2      CATGGACACTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTTCATATTT 727
consensus_10729#1      CATGGACACTTATGAAGACACAGGGAATGATTCAGTG----------------------- 595
                       ******************* *****************                       

consensus_10729#0      TGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCAT 808
consensus_10729#2      TGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCAT 787
consensus_10729#1      --------AAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGCAT 647
                               ****************************************************

consensus_10729#0      CACATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAG 868
consensus_10729#2      CACATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAG 847
consensus_10729#1      CACATATGATAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAG 707
                       ********* **************************************************

consensus_10729#0      AATGCCACTAAAGCCTGAACTTGTGTTTGAAGATATCAGCCAAGATCATGCACGGAAGAC 928
consensus_10729#2      AATGCCACTAAAGCCTGAACTTGTGTTTGAAGATATCAGCCAAGATCATGCACGGAAGAC 907
consensus_10729#1      AATGCCATTAAAGCCTGAACTTGTGTTTGAAGATATCAGC-AAGACCATGCGCGGAAGAC 766
                       ******* ******************************** **** ***** ********

consensus_10729#0      GGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATG 988
consensus_10729#2      GGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATG 967
consensus_10729#1      GGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATG 826
                       ************************************************************

consensus_10729#0      CAAACATGCTGCTGTGATGAAAAAGATCATTGATGTTCTAATGTCTCAAGGAGTTGAACC 1048
consensus_10729#2      CAAACATGCTGCTGTGATGAAAAAGATCATTGATGTTTTAATGTCTCAAGGAGTTGAACC 1027
consensus_10729#1      CAAACACGCTGCTGTGATGAAAAAGATCATTGATGTTCTAATGTCTCGAGGAGTTGAACC 886
                       ****** ****************************** ********* ************

consensus_10729#0      AGAAGTTGACAAGCACCTTTTCATATTTTTGAAGTTTATGGCCTCAGTCATACCCACTAT 1108
consensus_10729#2      AGAAGTTGACAAGTACCTTTTCATATTTTTGAAGTTTATGGCCTCAGTCATACCCACTAT 1087
consensus_10729#1      AGAAGTTGACAAGTAACTTTTCATATTTTTGAAGTTTATGGCCCCAGTCATACCCACTAT 946
                       ************* * *************************** ****************

consensus_10729#0      TGAATATGACTACACTATGGACTTCGATCTGGGCAGCACAAGCAGATGATTTGTTAATTG 1168
consensus_10729#2      TGAATATGACTACACTATGGACTTCGATTTGGGCAGCACAAGCAGATGATTTGTTAATTG 1147
consensus_10729#1      TGAATATGACTACACTATGGACTTCGATCTGGGCAGTACAAGCAGATGATTTGTTAATTG 1006
                       **************************** ******* ***********************

consensus_10729#0      AAGGAAAGGGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCCCAAATAAT 1228
consensus_10729#2      AAGGAAAGGGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCCCCAAATAAT 1207
consensus_10729#1      AAGGAAAGTGAAAGATCCTGTAGAAGGTGTACCAAGGCTTATCATGGTGCC-----TAAT 1061
                       ******** ******************************************     ****

consensus_10729#0      CATTGCTTGTTGGAAAGAATTGTATATGCAATATGTGCGTGCATGTGTGCTCATTCGTTT 1288
consensus_10729#2      CATTGCTTGTTGGAAAGAATTGTATATGCAATATGTGCGTGCATGTGTGCTCATTCGTTT 1267
consensus_10729#1      CATTGCTTGGTGGAAAGGGGGGTATATGCAATACGTGCGTGCATGTCTGCTCATTCGTTT 1121
                       ********* *******    ************ ************ *************

consensus_10729#0      GGAAAGTAACTGGAAACAATGCAGAAACATCAGGGCTGATTTGCCATGTACATGTAACAC 1348
consensus_10729#2      GGAAAGTAACTGGAAACAATGCAGAAACATCAGGGCTGATTTGCCATGTACATGTAACAC 1327
consensus_10729#1      GGAAAGTAACTGTAAACTCTGCAGAT---TCAAAG------------GTACATGTAACAC 1166
                       ************ ****  ******    ***  *            *************

consensus_10729#0      TACATACCCGTTTCACTTGAATTCGTTTGCCTTCCAGATTGAATCCATCTGTTCTTAGAT 1408
consensus_10729#2      TACATAAAGGTTTCACTTGAATTCGTTTGCCTTCCAGATGACAAAAAAGG---------- 1377
consensus_10729#1      TACATACCCGTTTCACTTGAATTCGTTTGGCTTCAAAANTANA--CANNNNATCCAAAAT 1224
                       ******   ******************** **** * *    *   *             

consensus_10729#0      ACACGT------------------------------------------------------ 1414
consensus_10729#2      ------------------------------------------------------------
consensus_10729#1      ATAATTAATTATTTTGAGGAGGGAATCGTTTCCAACTCCTCCTCTTGCTCTTTTTTTTAC 1284
                                                                                   

consensus_10729#0      ------------------------------------------------------------
consensus_10729#2      ------------------------------------------------------------
consensus_10729#1      CGCCACCCATTTCCCCTTTTTTTTTAATCTTCTTTTTCGGCGATCGTCTCCGTTACCTTG 1344
                                                                                   

consensus_10729#0      ------------------------------------------------------------
consensus_10729#2      ------------------------------------------------------------
consensus_10729#1      CATGCATCGACTTGGCGGACCGCCTCATTCAACCTACTATTTCCATCTTTTTTACTCTCT 1404
                                                                                   

consensus_10729#0      --------
consensus_10729#2      --------
consensus_10729#1      ACCACCCT 1412
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)