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Oryza sativa
cluster # 10734 cluster # 10734       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10734#0 length = 2365 sequences # 5  
consensus_10734#1 length = 462 sequences # 1  
consensus_10734#2 length = 446 sequences # 2  

consensusID : consensus_10734#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2365
fasta sequence
                              [GGTAGGCGAGTCGCTGGGCAGCGAGGGAGACAGCGCGGCGGCGAGGAGATCCAAGCGGCGGCGGGCGGAGATGGCGGCGGAGGGGAAGACGAGGGTGGTGGTGGTCGGCGGCGGCATCGCCGGATCGCTCCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGTAAGCCTAGCCTCGCCTCGCCTCGCCTCCGCAAGTTCCCCTCAGGCTCGCCCCGTGCTTGTGGAAATGCCTGCTCCTAGTGTATCGTTGGGATCTAGCTTGTTCTAGCGATTGTTTTTTTTTTATGGAAGACATGTCACTGGATTGGATGCTGCCGTACTGGGCTGACAAGTGCATTTAGCTGCTACTATGATTTTAGGTGTAGGAAAATGCGCGCTGATTTTAGGTTGGGAAGCCATGTTTCTGCGTTTTCCTAGCATTTGTCTGGCCCCAGGTAATCGAGGATGTTTCTGAAGCATCATAATTCATAGAGCCGTAGAGGATGAATACGAATTTCATCAATTTAAGTTTTGAAAAATGCGGGGAACAGCCTGAAAGGGTTGCATGTTCTGTTCAAACTAAGAGAAATTTTACGGTCCTTAAGAAAGTACCTTAAGCTACTAAGATTTTACACTAAAAATTTTGGTACCTCGAGATACCTAGTACCTGGAGATAACAAATTTTACACTAGAAAATATGGTACCTCCCGGTACCTTTTTAAGGATGGTAAAATTACTCTCAAACTAATTGCATAACGAACTCTACATGACTGTTTTCCATTTAACTTCAATCAACAACATACGGGATGGGTGTAATTGTTTCCTCGATTTCGCTGGCATGTACTTTGCGGTCCAGTGAGTTAATGCCATAAGATGAGTTTCCACTTACTTTTTGTTGATTGTGATTTTTTTTTTGTGCTCGCCCAAGTTGCTCATCCTTCTGTACAATAAGTTATAGCATCTCAAATGATGCACAAGTAGGCTTGTTCATATAGAATGCAGATCAGTTTTGCTGAAAGTTTAATGGTTATGTCCTCTGCGAATCTATGCAGACAATAAACAAGCTTCATACCCTTACACTTAAGTATCATCAATCATGTCATAATCGGCTATATCTTCTGATGACAGGAAGGACTATTTAGAGATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATCTATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACAGAACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCAACTGGCCACGCATTAACTTCTCCTGGGAGCAGAAGCGAGAGGATAAAAGAATTCCAAAGAGATAAAGGGAAGATTGAATCCTCCGAATCAGTTCTGATAATTGGAGGCGGCCCAACTGGTGTTGAGCTAGCTGGAGAGATTGCAGTAGATTACCCAGAGAAGAAGGTGACCCTTGTCCATAGAGGATCACGGTTACTAGAATTTATTGGAGACAAAGCTTCCAAAAAGTGTCTTGATTGGCTCACTTCAAAGAAAGTAGATGTGCTTTTCCAGCAGTCGATTGACTTGGATTCATTATCGAACACAGAGAAGTTGTACAGAACATCAGCTGGAGAAACAGTAACAGCTGATTGCCACTTTGTGTGTATCGGTAAGCCACTCAGTTCATCATGGCTACATGATACCATTCTAAAGGAATCCTTGGACAACAAGGGAAGACTAATGGTGGAAAAGGATTTAAGAATAAAAGGTTATAATAACATTTTTGCAATTGGTGACATCACAGATATTCCTGAAATTAAGCAAGGTTACCTTGCCCATAAGCATGCTCTGCTAGTAGCAAAGAACTTGAGATTATTGATTAAAGGTTCTCCTAACAGCAAACTGGAGACTTACAGCCCT-GGATTTGCA-TTGGCACTTATC--TCTCTTGGAAGGAACG-AAGGGTTGGCTCAGTTG-CCGTTCC--TCACACTCGGTGGCTGCTTACCAGGCAAGATTAAATCT-CGAGAT-CT-GTTTATTGGTAGGACAAGGAAGCAGATGGGTCTAAATGCTTGAAGTCTTTCTTTTCAAACAAATATGCTTCGCCCATATTGTGCTGTATCTGCACAAGTAAAGAATGATGGTGTGAAATTGTGAATAGCAATGGACTATGTGCATTTACTTTGTATGCTGAGATCTTTTGCCATTGTAATGGGTGTGACAATCAATTCATGGATTTGTTTGTTGGTTGGCAACTGAATGCTACATTTGCTTGTCTGTAATGATATTATTATTGTCGGCGACGAATATTTGATA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK120153             [GGTAGGCGAGTCGCTGGGCAGCGAGGGAGACAGCGCGGCGGCGAGGAGATCCAAGCGGCGGCGGGCGGAGATGGCGGCGGAGGGGAAGACGAGGGTGGTGGTGGTCGGCGGCGGCATCGCCGGATCGCTCCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGTAAGCCTAGCCTCGCCTCGCCTCGCCTCCGCAAGTTCCCCTCAGGCTCGCCCCGTGCTTGTGGAAATGCCTGCTCCTAGTGTATCGTTGGGATCTAGCTTGTTCTAGCGATTGTTTTTTTTTTATGGAAGACATGTCACTGGATTGGATGCTGCCGTACTGGGCTGACAAGTGCATTTAGCTGCTACTATGATTTTAGGTGTAGGAAAATGCGCGCTGATTTTAGGTTGGGAAGCCATGTTTCTGCGTTTTCCTAGCATTTGTCTGGCCCCAGGTAATCGAGGATGTTTCTGAAGCATCATAATTCATAGAGCCGTAGAGGATGAATACGAATTTCATCAATTTAAGTTTTGAAAAATGCGGGGAACAGCCTGAAAGGGTTGCATGTTCTGTTCAAACTAAGAGAAATTTTACGGTCCTTAAGAAAGTACCTTAAGCTACTAAGATTTTACACTAAAAATTTTGGTACCTCGAGATACCTAGTACCTGGAGATAACAAATTTTACACTAGAAAATATGGTACCTCCCGGTACCTTTTTAAGGATGGTAAAATTACTCTCAAACTAATTGCATAACGAACTCTACATGACTGTTTTCCATTTAACTTCAATCAACAACATACGGGATGGGTGTAATTGTTTCCTCGATTTCGCTGGCATGTACTTTGCGGTCCAGTGAGTTAATGCCATAAGATGAGTTTCCACTTACTTTTTGTTGATTGTGATTTTTTTTTTGTGCTCGCCCAAGTTGCTCATCCTTCTGTACAATAAGTTATAGCATCTCAAATGATGCACAAGTAGGCTTGTTCATATAGAATGCAGATCAGTTTTGCTGAAAGTTTAATGGTTATGTCCTCTGCGAATCTATGCAGACAATAAACAAGCTTCATACCCTTACACTTAAGTATCATCAATCATGTCATAATCGGCTATATCTTCTGATGACAGGAAGGACTATTTAGAGATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATCTATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACAGAACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCAACTGGCCACGCATTAACTTCTCCTGGGAGCAGAAGCGAGAGGATAAAAGAATTCCAAAGAGATAAAGGGAAGATTGAATCCTCCGAATCAGTTCTGATAATTGGAGGCGGCCCAACTGGTGTTGAGCTAGCTGGAGAGATTGCAGTAGATTACCCAGAGAAGAAGGTGACCCTTGTCCATAGAGGATCACGGTTACTAGAATTTATTGGAGACAAAGCTTCCAAAAAGTGTCTTGATTGGCTCACTTCAAAGAAAGTAGATGTGCTTTTCCAGCAGTCGATTGACTTGGATTCATTATCGAACACAGAGAAGTTGTACAGAACATCAGCTGGAGAAACAGTAACAGCTGATTGCCACTTTGTGTGTATCGGTAAGCCACTCAGTTCATCATGGCTACATGATACCATTCTAAAGGAATCCTTGGACAACAAGGGAAGACTAATGGTGGAAAAGGATTTAAGAATAAAAGGTTATAATAACATTTTTGCAATTGGTGACATCACAGATATTCCTGAAATTAAGCAAGGTTACCTTGCCCATAAGCATGCTCTGCTAGTAGCAAAGAACTTGAGATTATTGATTAAAGGTTCTCCTAACAGCAAACTGGAGACTTACAGCCCT GGATTTGCA TTGGCACTTATC  TCTCTTGGAAGGAACG AAGGGTTGGCTCAGTTG CCGTTCC  TCACACTCGGTGGCTGCTTACCAGGCAAGATTAAATCT CGAGAT CT GTTTATTGGTAGGACAAGGAAGCAGATGGGTCTAAATGCTTGAAGTCTTTCTTTTCAAACAAATATGCTTCGCCCATATTGTGCTGTATCTGCACAAGTAAAGAATGATGGTGTGAAATTGTGAATAGCAATGGACTATGTGCATTTACTTTGTATGCTGAGATCTTTTGCCATTGTAATGGGTGTGACAATCAATTCATGGATTTGTTT                                                                                                             ]
[+] EMBL CF322607             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTCTGCAGTCAATATCACAGAACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCAACTGGCCACGCATTAACTTCTCCTGGGAGCAGAAGCGAGAGGATAAAAGAATTCCAAAGAGATAAAGGGAAGATTGAATCCTCCGAATCAGTTCTGATAATTGGAGGCGGCCCAACTGGTGTTGAGCTAGCTGGAGAGATTGCAGTAGATTACCCAGAGAAGAAGGTGACCCTTGTCCATAGAGGATCACGGTTACTAGAATTTATTGGAGACAAAGCTTCCAAAAAGTGTCTTGATTGGCTCACTTCAAAGAAAGTAGATGTGCTTTTCCAGCAGTCGATTGACTTGGATTCATTATCGAACACAGAGAAGTTGTACAGAACATCAGCTGGAGAAACAGTAACAGCTGATTGCCACTTTGTGTGTATCGGTAAGCCACTCAGTTCATCATGGCTACATGATACCATTCTAAAGGAATCCTTGGAC ACAAGGGAAGACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BI306623             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGAACATCAGCTGGAGAAACAGTAACAGCTGATTGCCACTTTGTGTGTATCGGTAAGCCACTCAGTTCATCATGGCTACATGATACCATTCTAAAGGAATCCTTGGACAACAAGGGAAGACTAATGGTGGAAAAGGATTTAAGAATAAAAGGTTATAATAACATTTTTGCAATTGGTGACATCACAGATATTCCTGAAATTAAGCAAGGTTACCTTGCCCATAAGCATGCTCTGCTAGTAGCAAAGAACTTGAGATTATTGATTAAAGGTTCTCCTAACAGCAAACTGGAGACTTACAGCCCT GGATTTGCA TTGGCACTTATC  TCTCTTGGAAGGAACG AAGGGTTGGCTCAGTTG CCGTTCC  TCACACTCGGTGGCTGCTTACCAGGCAAGATTAAATCT CGAGAT CT GTTTATTGGTAGGACAAGGAAGCAGATGGGTCTAAATGCTTGAAGTCTTTCTTTTCAAACAAATATGCTTCGCCCATATTGTGCTGTATCTGCACAAGTAAAGAATGATGGTGTGAAATTGTGAATAGCAATGGACTATGTGCATTTACTTTGTATGCTGAGATCTTTTGCCATTGTAATGGGTGTGACAATCAATTCATGGATTTGTTTGTTGGTTGGCAACTGAATGCTACATTTGCTTGTCTGTAATGATATTATTATTGTCGGCGACGAATA                                           ]
[+] EMBL AU101797             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAGCCCTGGGATTTGCATTTGGCACTTATCCTTCTCTTGGAAGGANCGAAAGGGTTGGCTCAGTTGCCCGTTCCCTTCACACTCGGTGGCTGCTTACCAGGCAAGATTAAATCTCCGAGATCCTGGTNTATTGGTAGGACAAGGAAGCAGATGGGTCTAAATGCTTGAAGTCTTTCTTTTCAAACAAATATGNTTCGCCCATATTGTGCTGTATCTGCACAAGTAAAGAATGATGGTGTGAAATTGTGAATAGCAATGGACTATGTGCATTTACTTTGTATGCTGAGATCTTTTGCCATTGTAATGGGTGTGACAATCAATTCATGGATTTGTTTGTTGGTTGGCAACTGAATGCTACATTTGCTTGTCTGTAATGATATTATTATTGTCGGCGACGAATATTTGATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU092304             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAATCT CGAGAT CT GTTTATCGGTNGGACAAGGAAGCAGATGGGTCTAANTGCTTGAAGTCTTTCTTTTCAAACAAATAATNTTCGCCCATATTGTGCTGTATCTGCACAAGTAAAGAATGATGGTGTGAAATTGTGAATAGCAATGGACTATGTGCATTTACTTTGTATGCTGAGATCTTTTGCCATTGTAATGGGTNTGACAATCAATTCATGGATTTGTTTGTTGGTTGGCAACTGAATGCTACATTTGCTTGTCTGTAATGATATTATTATTGTCGGCGACGAATATTTGATA  AAAAAAAAAAAAAAAAAAAAAAAAA         ]


>consensus_10734#0 GGTAGGCGAGTCGCTGGGCAGCGAGGGAGACAGCGCGGCGGCGAGGAGATCCAAGCGGCG GCGGGCGGAGATGGCGGCGGAGGGGAAGACGAGGGTGGTGGTGGTCGGCGGCGGCATCGC CGGATCGCTCCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGTA AGCCTAGCCTCGCCTCGCCTCGCCTCCGCAAGTTCCCCTCAGGCTCGCCCCGTGCTTGTG GAAATGCCTGCTCCTAGTGTATCGTTGGGATCTAGCTTGTTCTAGCGATTGTTTTTTTTT TATGGAAGACATGTCACTGGATTGGATGCTGCCGTACTGGGCTGACAAGTGCATTTAGCT GCTACTATGATTTTAGGTGTAGGAAAATGCGCGCTGATTTTAGGTTGGGAAGCCATGTTT CTGCGTTTTCCTAGCATTTGTCTGGCCCCAGGTAATCGAGGATGTTTCTGAAGCATCATA ATTCATAGAGCCGTAGAGGATGAATACGAATTTCATCAATTTAAGTTTTGAAAAATGCGG GGAACAGCCTGAAAGGGTTGCATGTTCTGTTCAAACTAAGAGAAATTTTACGGTCCTTAA GAAAGTACCTTAAGCTACTAAGATTTTACACTAAAAATTTTGGTACCTCGAGATACCTAG TACCTGGAGATAACAAATTTTACACTAGAAAATATGGTACCTCCCGGTACCTTTTTAAGG ATGGTAAAATTACTCTCAAACTAATTGCATAACGAACTCTACATGACTGTTTTCCATTTA ACTTCAATCAACAACATACGGGATGGGTGTAATTGTTTCCTCGATTTCGCTGGCATGTAC TTTGCGGTCCAGTGAGTTAATGCCATAAGATGAGTTTCCACTTACTTTTTGTTGATTGTG ATTTTTTTTTTGTGCTCGCCCAAGTTGCTCATCCTTCTGTACAATAAGTTATAGCATCTC AAATGATGCACAAGTAGGCTTGTTCATATAGAATGCAGATCAGTTTTGCTGAAAGTTTAA TGGTTATGTCCTCTGCGAATCTATGCAGACAATAAACAAGCTTCATACCCTTACACTTAA GTATCATCAATCATGTCATAATCGGCTATATCTTCTGATGACAGGAAGGACTATTTAGAG ATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATC TATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACA GAACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCA ACTGGCCACGCATTAACTTCTCCTGGGAGCAGAAGCGAGAGGATAAAAGAATTCCAAAGA GATAAAGGGAAGATTGAATCCTCCGAATCAGTTCTGATAATTGGAGGCGGCCCAACTGGT GTTGAGCTAGCTGGAGAGATTGCAGTAGATTACCCAGAGAAGAAGGTGACCCTTGTCCAT AGAGGATCACGGTTACTAGAATTTATTGGAGACAAAGCTTCCAAAAAGTGTCTTGATTGG CTCACTTCAAAGAAAGTAGATGTGCTTTTCCAGCAGTCGATTGACTTGGATTCATTATCG AACACAGAGAAGTTGTACAGAACATCAGCTGGAGAAACAGTAACAGCTGATTGCCACTTT GTGTGTATCGGTAAGCCACTCAGTTCATCATGGCTACATGATACCATTCTAAAGGAATCC TTGGACAACAAGGGAAGACTAATGGTGGAAAAGGATTTAAGAATAAAAGGTTATAATAAC ATTTTTGCAATTGGTGACATCACAGATATTCCTGAAATTAAGCAAGGTTACCTTGCCCAT AAGCATGCTCTGCTAGTAGCAAAGAACTTGAGATTATTGATTAAAGGTTCTCCTAACAGC AAACTGGAGACTTACAGCCCTGGATTTGCATTGGCACTTATCTCTCTTGGAAGGAACGAA GGGTTGGCTCAGTTGCCGTTCCTCACACTCGGTGGCTGCTTACCAGGCAAGATTAAATCT CGAGATCTGTTTATTGGTAGGACAAGGAAGCAGATGGGTCTAAATGCTTGAAGTCTTTCT TTTCAAACAAATATGCTTCGCCCATATTGTGCTGTATCTGCACAAGTAAAGAATGATGGT GTGAAATTGTGAATAGCAATGGACTATGTGCATTTACTTTGTATGCTGAGATCTTTTGCC ATTGTAATGGGTGTGACAATCAATTCATGGATTTGTTTGTTGGTTGGCAACTGAATGCTA CATTTGCTTGTCTGTAATGATATTATTATTGTCGGCGACGAATATTTGATAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_10734#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 462
fasta sequence
                              [CTGGGCAGCGAGGGAGACAGCGCGGCGGCGAGGAGATCCAAGCGGCGGCGGCGGCATCGCCGGATCGCTCCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGAAGGACTATTTAGAGATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATCTATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACAGAACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCAACTGGCCACGCATTAACTTCTCCTGGGAGCAGAAGCGAGAGGATAAAAGAATTCCAAAGAGATAAAGGGGAAGATTGAATCCTCCGAATCAGTTCTGATAATTGGAGGCGGCCCAACTGGGTGTTGAGCTAGCTGGAGAGATTGCAGTA]

[+] EMBL CF322596             [CTGGGCAGCGAGGGAGACAGCGCGGCGGCGAGGAGATCCAAGCGGCGGCGGCGGCATCGCCGGATCGCTCCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGAAGGACTATTTAGAGATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATCTATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACAGAACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCAACTGGCCACGCATTAACTTCTCCTGGGAGCAGAAGCGAGAGGATAAAAGAATTCCAAAGAGATAAAGGGGAAGATTGAATCCTCCGAATCAGTTCTGATAATTGGAGGCGGCCCAACTGGGTGTTGAGCTAGCTGGAGAGATTGCAGTA]


>consensus_10734#1 CTGGGCAGCGAGGGAGACAGCGCGGCGGCGAGGAGATCCAAGCGGCGGCGGCGGCATCGC CGGATCGCTCCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGAA GGACTATTTAGAGATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGA GAGATCATTAATCTATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGC AGTCAATATCACAGAACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTA TCTAGTTATAGCAACTGGCCACGCATTAACTTCTCCTGGGAGCAGAAGCGAGAGGATAAA AGAATTCCAAAGAGATAAAGGGGAAGATTGAATCCTCCGAATCAGTTCTGATAATTGGAG GCGGCCCAACTGGGTGTTGAGCTAGCTGGAGAGATTGCAGTA



consensusID : consensus_10734#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 446
fasta sequence
                              [AGTCGCTGGGCAGCGAGGGAGACAGCGCGGCGGCGA-GGAGATCCAAGCGGCGGCGGGCGGAGATGGCGGCGGAGGGGAAGACGAGGGTGGTGGTGGTCGGCGGCGGCATCGCGANT-CGCNNCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGNAGACTATTTAGAGATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATCTATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACAGGACAAGCCGTGCTGA-CCGC-TGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCAACTTGG-CACGNA-TTAACTTCTCCTTGGGAGCAGAAGCAAGAGGNTAAAAGATTTCCAAGGGGTAAAGGGAGGTTTAATCCTCC]

[+] EMBL C26422               [AGTCGCTGGGCAGCGAGGGAGACAGCGCGGCGGCGA GGAGATCCAAGCGGCGGCGGGCGGAGATGGCGGCGGAGGGGAAGACGAGGGTGGTGGTGGTCGGCGGCGGCATCGCGANT CGCNNCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGNAGACTATTTAGAGATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATCTATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACAGGACAAGCCGTGCTGA CCGC TGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCAACTTGG CACGNA TTAACTTCTCCTTGGGAGCAGAAGCAAGAGGNTAAAAGATTTCCAAGGGGTAAAGGGAGGTTTAATCCTCC]
[+] EMBL OSS14370A            [    GCTNGGCAGCGAGGGAGACAGCGCGGCTGCGANNGAGATCCAAGCNGCGGCGNGCGGAGATNGCGGCGGAGGGGAAGACGAGGGTNGTGGTGGTCNGCGGCGGCATC CNATTNCGCTCCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGAAGACTATTTAGAGATCCCTTGGGCTGAATTNAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATCTATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACAGAACAAGCCGTGCTGACCCNCTTNATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCAACTTGGCCACGNATTTAACTTCTTCTng                                                         ]


>consensus_10734#2 AGTCGCTGGGCAGCGAGGGAGACAGCGCGGCGGCGAGGAGATCCAAGCGGCGGCGGGCGG AGATGGCGGCGGAGGGGAAGACGAGGGTGGTGGTGGTCGGCGGCGGCATCGCGANTCGCN NCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGNAGACTATTTA GAGATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTA ATCTATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATC ACAGGACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTATCTAGTTATA GCAACTTGGCACGNATTAACTTCTCCTTGGGAGCAGAAGCAAGAGGNTAAAAGATTTCCA AGGGGTAAAGGGAGGTTTAATCCTCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      GGTAGGCGAGTCGCTGGGCAGCGAGGGAGACAGCGCGGCGGCGAGGAGATCCAAGCGGCG 60
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      GCGGGCGGAGATGGCGGCGGAGGGGAAGACGAGGGTGGTGGTGGTCGGCGGCGGCATCGC 120
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      CGGATCGCTCCTTGCCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCTCGATCCGTA 180
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      AGCCTAGCCTCGCCTCGCCTCGCCTCCGCAAGTTCCCCTCAGGCTCGCCCCGTGCTTGTG 240
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      GAAATGCCTGCTCCTAGTGTATCGTTGGGATCTAGCTTGTTCTAGCGATTGTTTTTTTTT 300
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      TATGGAAGACATGTCACTGGATTGGATGCTGCCGTACTGGGCTGACAAGTGCATTTAGCT 360
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      GCTACTATGATTTTAGGTGTAGGAAAATGCGCGCTGATTTTAGGTTGGGAAGCCATGTTT 420
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      CTGCGTTTTCCTAGCATTTGTCTGGCCCCAGGTAATCGAGGATGTTTCTGAAGCATCATA 480
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      ATTCATAGAGCCGTAGAGGATGAATACGAATTTCATCAATTTAAGTTTTGAAAAATGCGG 540
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      GGAACAGCCTGAAAGGGTTGCATGTTCTGTTCAAACTAAGAGAAATTTTACGGTCCTTAA 600
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      GAAAGTACCTTAAGCTACTAAGATTTTACACTAAAAATTTTGGTACCTCGAGATACCTAG 660
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      TACCTGGAGATAACAAATTTTACACTAGAAAATATGGTACCTCCCGGTACCTTTTTAAGG 720
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      ATGGTAAAATTACTCTCAAACTAATTGCATAACGAACTCTACATGACTGTTTTCCATTTA 780
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      ACTTCAATCAACAACATACGGGATGGGTGTAATTGTTTCCTCGATTTCGCTGGCATGTAC 840
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      TTTGCGGTCCAGTGAGTTAATGCCATAAGATGAGTTTCCACTTACTTTTTGTTGATTGTG 900
                                                                                   

consensus_10734#1      ---------------------------------------------------------CT- 2
consensus_10734#2      ----------------------------------------------------AGTCGCT- 7
consensus_10734#0      ATTTTTTTTTTGTGCTCGCCCAAGTTGCTCATCCTTCTGTACAATAAGTTATAGCATCTC 960
                                                                                ** 

consensus_10734#1      GGGCAGCGAGGGAGACAGCGCGGCGGCGAGGAGATCCAAGCGGCGGCGG----------- 51
consensus_10734#2      GGGCAGCGAGGGAGACAGCGCGGCGGCGAGGAGATCCAAGCGGCGGCGGGCGGAGAT-GG 66
consensus_10734#0      AAATGATGCACAAGTAGGCTTGTTCATATAGAATGCAGATCAGTTTTGCTGAAAGTTTAA 1020
                              *    **   **  *        **   *  * * *    *            

consensus_10734#1      -------------------------------------CGGCATCGCCGGATCGCTCCTTG 74
consensus_10734#2      CGGCGGAGGGGAAGACGAGGGTGGTGGTGGTCGGCGGCGGCATCGC-GANTCGCNNCTTG 125
consensus_10734#0      TGGTTATGTCCTCTGCGAATCTATGCAGACAATAAACAAGCTTCATACCCTTACACTTAA 1080
                                                              ** **      *  *   *  

consensus_10734#1      CCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCT-CGATCCGAAGGACTATTTAGAG 133
consensus_10734#2      CCAAGACCATGCAGCCCCACGCCGACGTCGTCCTCCT-CGATCCGNAG-ACTATTTAGAG 183
consensus_10734#0      GTATCATCAATCATGTCATAATCGGCTATATCTTCTGATGACAGGAAGGACTATTTAGAG 1140
                         *  * **  **   *     ** *    ** **    **   * ** ***********

consensus_10734#1      ATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATC 193
consensus_10734#2      ATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATC 243
consensus_10734#0      ATCCCTTGGGCTGAATTGAGATCAATGGTTGAACCCTCTTTTGCTGAGAGATCATTAATC 1200
                       ************************************************************

consensus_10734#1      TATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACA 253
consensus_10734#2      TATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACA 303
consensus_10734#0      TATCACAGAGATTATCTCACCAATGCAACTATTGTAACCTCTTCTGCAGTCAATATCACA 1260
                       ************************************************************

consensus_10734#1      GAACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCA 313
consensus_10734#2      GGACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCA 363
consensus_10734#0      GAACAAGCCGTGCTGACCGCTGATGGTCAATCTCTTGCGTATGATTATCTAGTTATAGCA 1320
                       * **********************************************************

consensus_10734#1      ACTGGCCACGCATTAACTTCTCCT-GGGAGCAGAAGCGAGAGGATAAAAGAATTCCAAAG 372
consensus_10734#2      ACTTGGCACGNATTAACTTCTCCTTGGGAGCAGAAGCAAGAGGNTAAAAGATTTCCAAGG 423
consensus_10734#0      ACTGGCCACGCATTAACTTCTCCT-GGGAGCAGAAGCGAGAGGATAAAAGAATTCCAAAG 1379
                       *** * **** ************* ************ ***** ******* ****** *

consensus_10734#1      AGATAAAGGGGAAGATTGAATCCTCCGAATCAGTTCTGATAATTGGAGGCGGCCCAACTG 432
consensus_10734#2      GG-TAAAGGG--AGGTTTAATCCTCC---------------------------------- 446
consensus_10734#0      AGATAAAGGG-AAGATTGAATCCTCCGAATCAGTTCTGATAATTGGAGGCGGCCCAACTG 1438
                        * *******  ** ** ********                                  

consensus_10734#1      GGTGTTGAGCTAGCTGGAGAGATTGCAGTA------------------------------ 462
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      G-TGTTGAGCTAGCTGGAGAGATTGCAGTAGATTACCCAGAGAAGAAGGTGACCCTTGTC 1497
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      CATAGAGGATCACGGTTACTAGAATTTATTGGAGACAAAGCTTCCAAAAAGTGTCTTGAT 1557
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      TGGCTCACTTCAAAGAAAGTAGATGTGCTTTTCCAGCAGTCGATTGACTTGGATTCATTA 1617
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      TCGAACACAGAGAAGTTGTACAGAACATCAGCTGGAGAAACAGTAACAGCTGATTGCCAC 1677
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      TTTGTGTGTATCGGTAAGCCACTCAGTTCATCATGGCTACATGATACCATTCTAAAGGAA 1737
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      TCCTTGGACAACAAGGGAAGACTAATGGTGGAAAAGGATTTAAGAATAAAAGGTTATAAT 1797
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      AACATTTTTGCAATTGGTGACATCACAGATATTCCTGAAATTAAGCAAGGTTACCTTGCC 1857
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      CATAAGCATGCTCTGCTAGTAGCAAAGAACTTGAGATTATTGATTAAAGGTTCTCCTAAC 1917
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      AGCAAACTGGAGACTTACAGCCCTGGATTTGCATTGGCACTTATCTCTCTTGGAAGGAAC 1977
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      GAAGGGTTGGCTCAGTTGCCGTTCCTCACACTCGGTGGCTGCTTACCAGGCAAGATTAAA 2037
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      TCTCGAGATCTGTTTATTGGTAGGACAAGGAAGCAGATGGGTCTAAATGCTTGAAGTCTT 2097
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      TCTTTTCAAACAAATATGCTTCGCCCATATTGTGCTGTATCTGCACAAGTAAAGAATGAT 2157
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      GGTGTGAAATTGTGAATAGCAATGGACTATGTGCATTTACTTTGTATGCTGAGATCTTTT 2217
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      GCCATTGTAATGGGTGTGACAATCAATTCATGGATTTGTTTGTTGGTTGGCAACTGAATG 2277
                                                                                   

consensus_10734#1      ------------------------------------------------------------
consensus_10734#2      ------------------------------------------------------------
consensus_10734#0      CTACATTTGCTTGTCTGTAATGATATTATTATTGTCGGCGACGAATATTTGATAAAAAAA 2337
                                                                                   

consensus_10734#1      ----------------------------
consensus_10734#2      ----------------------------
consensus_10734#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAA 2365
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)