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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10737#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2598 fasta sequence
[CTCCTCTCGCCGCCGCCGCCGCCGCCGGGATGGCGCTGCGCACGCCGGAGCTGCGCTTCGCCGCCGCGGCGGGGCTCGGGGCGCTCTCGCGCCCATCCCGCGTCGCGCCGTCCCCGCTCGCCGCGCTGGCGGCGCCGCGCCGGCGCAGGCGCCGCTCCCCGTCGCCCTCCCCCGCGCCCTCCGACTCCGACTCCAACCCCGCCTCCTCCGCCCCCGCGAACGCCGGTGGGGCGGCGGCGGCGGCGGAGGCGCCGGAGTGGAAGAAGGTGAGCGCGAAGCGGTTCGGGATCAAGGACTCCATGATCCCCGACGAGGCCTGGAACGTCCTCCACCGCCTCCGCAGCAGAGGATATGATGTCTACCTGGTTGGTGGTTGTGTTCGAGATCTCATAATGAAGAAAACCCCAAAAGATTTTGACATAATAACCACAGCTGATCTTAGGCAGGTGAAAGACACTTTCTCAGGATCAGCTGTTATAGTAGGAAGGCGGTTCCCAATATGTCATGTATATGAGAACAATTCAATTGTTGAGGTGTCAAGTTTTAACACTTATGCACGAGGGTCAACTAGCAATCAAATTTACACGTCCAAGAGCCCCCATTGTAGCAAAAATGATTATATCCGATGGAAAAATTGCCAAGGGAGGGACTTCACTATAAACGGGTTAATGTTCAATCCATATGCAGAAAAGATCTACGACTACTTCGGAGGAATCGAGGATATTAAGAAAGCTAAGGTTCGTACCGTGATTCCAGCTGGCACATCATTCCAGGAGGACTGTGCTCGTATTCTACGTGCAATCAGAATTGCAGCTCGTTTAGGGTTCAACTTTCCAAAAGAAACTGCTTATTATGTGCGAACTCTTGCCTGCTCTGTGGCAAGACTTGATAAGGGAAGAATACTCATGGAGATCAACTATATGCTTGCTTATGGTTCAGCTGAAGCTTCTTTAAGGTTGCTTTGGAGATTCGGTCTTCTTGAACACCTGCTGCCTTTTCAGGCAGCATATTTTTCTTCAACTCGTTTTAAGAGGAAGGATAAAGGAACTAACATGCTACTGGTCTTATTTTCTAAATTGGATAATTTTCTTGCTCCTAACAGGCCATGCCATAATAGTTTGTGGATAAGTATTTTAGCACTTCATGAAGCATTAGTACGCCAACCGCGTGATCCTTTAGTGGTAGCTACTTTTGCCCTAGCTCTATACCTTGGAGGTGATATGTCATTGGCACTAGATATTGGAAAATCAATCAACCGTCAACATAATACCGGATTTTCAGAGCTATTAGAACCCCAAGTCTGGGATGATAAGCATTTGGTAGGCGAGGTGCAAAGCCTAGCTGTCTCAATGCGGCGGGCATTAACTGAAATGACTGATGAATATTTTGTTGCAAATGCTATGGCAAAAATTCCTCAGGCACCATCCTCAGATCTTGTATTCATCCCACTACAAGCCTACCTAAAGGTTCTCAAATTAATTGAATGTGTTCAACATGGGAAAAAGGAGCATGGCTATGAACCGAAGAGAGATGGAAATATTGATTATCATGATCTATCTTATGGTACACCTGCAGAAGTAAGAAATGTCTTTACACTGGTCGTCTTCAACACATTATACCCCTCAAATACGGAGAATCAGCAGGATGTCAGCTCTTGAAGATGAAACTCTTGGCGTGATCATGAATAATTCAGGGGTTTGCAGTGGATATGCTGCAGCCTACAGGCTGCAGCTTAGACCAAACATCACAGGGATGGCCTACTGAAGTAGCTTCCACATCTTGAATGGCTTGAGCTCCTTTATGAAATCACGGCAGAACAGCAGGTCAAATTGCTGGATATGTTGCTCAGGGTATTATCTCATCTAGCATGATGGCTATGTCATCGGCCCAAGTGTACGGCATCAGTCCAGCTTGACAGAGCTTCAGGTTTTTTTTTTTTGTGGCATACTTTCTTCTAAGGCTCTTTTTGGTTCCCTAGAATTTAAAGAAATGTGTTCCATTAACATTTCTACAAGCATTATAATCAATAGCAATTGCATTGTGAATTAAGGAAGACGAGCCTTATTTTCAAACTTTTCAAAATGCTACTAAATTATGAAAGTTCTTCAAACGCTTTTCAGCATTGGTTACCACCAATCGATGCCCTTGCATTCGATGACACTTTCTTCAAATATGCAACCAATTGGTGCTCATTAAAGTTGCCCAAAATCATCGTCACAATTACCACATTTACTGATATAGTAAAATCATTCTTAGAACACAGCATATCTGCATTGCCCCTTTTTTTCTTGGGGACTCTTGTTTCTCTGGAACGGTATTGCATGTGCAGTCTCCACTTATTTCAAGTTAATTTATCAATTTTTAACTTCTTTCACCAAACAAACCAATGATGCTTGTACACTCTACCTTCCACTTTTGATGGTTGCAATGGTTGGTGTTTATGGAAGACGAANAGAACCGTGGAAACGTCTACCGCTCTNCAGATTGGTGAAGAACAAATCAAGTGCAATTGTGCAATATGGAAGGTTCACTACTCTAGTTCCTTGTCAATGCCTTTATGGTAACACCAATTCCATCATGCTTAATGTATGCTTAATA]
[+] EMBL AK120062 [CTCCTCTCGCCGCCGCCGCCGCCGCCGGGATGGCGCTGCGCACGCCGGAGCTGCGCTTCGCCGCCGCGGCGGGGCTCGGGGCGCTCTCGCGCCCATCCCGCGTCGCGCCGTCCCCGCTCGCCGCGCTGGCGGCGCCGCGCCGGCGCAGGCGCCGCTCCCCGTCGCCCTCCCCCGCGCCCTCCGACTCCGACTCCAACCCCGCCTCCTCCGCCCCCGCGAACGCCGGTGGGGCGGCGGCGGCGGCGGAGGCGCCGGAGTGGAAGAAGGTGAGCGCGAAGCGGTTCGGGATCAAGGACTCCATGATCCCCGACGAGGCCTGGAACGTCCTCCACCGCCTCCGCAGCAGAGGATATGATGTCTACCTGGTTGGTGGTTGTGTTCGAGATCTCATAATGAAGAAAACCCCAAAAGATTTTGACATAATAACCACAGCTGATCTTAGGCAGGTGAAAGACACTTTCTCAGGATCAGCTGTTATAGTAGGAAGGCGGTTCCCAATATGTCATGTATATGAGAACAATTCAATTGTTGAGGTGTCAAGTTTTAACACTTATGCACGAGGGTCAACTAGCAATCAAATTTACACGTCCAAGAGCCCCCATTGTAGCAAAAATGATTATATCCGATGGAAAAATTGCCAAGGGAGGGACTTCACTATAAACGGGTTAATGTTCAATCCATATGCAGAAAAGATCTACGACTACTTCGGAGGAATCGAGGATATTAAGAAAGCTAAGGTTCGTACCGTGATTCCAGCTGGCACATCATTCCAGGAGGACTGTGCTCGTATTCTACGTGCAATCAGAATTGCAGCTCGTTTAGGGTTCAACTTTCCAAAAGAAACTGCTTATTATGTGCGAACTCTTGCCTGCTCTGTGGCAAGACTTGATAAGGGAAGAATACTCATGGAGATCAACTATATGCTTGCTTATGGTTCAGCTGAAGCTTCTTTAAGGTTGCTTTGGAGATTCGGTCTTCTTGAACACCTGCTGCCTTTTCAGGCAGCATATTTTTCTTCAACTCGTTTTAAGAGGAAGGATAAAGGAACTAACATGCTACTGGTCTTATTTTCTAAATTGGATAATTTTCTTGCTCCTAACAGGCCATGCCATAATAGTTTGTGGATAAGTATTTTAGCACTTCATGAAGCATTAGTACGCCAACCGCGTGATCCTTTAGTGGTAGCTACTTTTGCCCTAGCTCTATACCTTGGAGGTGATATGTCATTGGCACTAGATATTGGAAAATCAATCAACCGTCAACATAATACCGGATTTTCAGAGCTATTAGAACCCCAAGTCTGGGATGATAAGCATTTGGTAGGCGAGGTGCAAAGCCTAGCTGTCTCAATGCGGCGGGCATTAACTGAAATGACTGATGAATATTTTGTTGCAAATGCTATGGCAAAAATTCCTCAGGCACCATCCTCAGATCTTGTATTCATCCCACTACAAGCCTACCTAAAGGTTCTCAAATTAATTGAATGTGTTCAACATGGGAAAAAGGAGCATGGCTATGAACCGAAGAGAGATGGAAATATTGATTATCATGATCTATCTTATGGTACACCTGCAGAAGTAAGAAATGTCTTTACACTGGTCGTCTTCAACACATTATACCCCTCAAATACGGAGAATCAGCAGGATGTCAGCTCTTGAAGATGAAACTCTTGGCGTGATCATGAATAATTCAGGGGTTTGCAGTGGATATGCTGCAGCCTACAGGCTGCAGCTTAGACCAAACATCACAGGGATGGCCTACTGAAGTAGCTTCCACATCTTGAATGGCTTGAGCTCCTTTATGAAATCACGGCAGAACAGCAGGTCAAATTGCTGGATATGTTGCTCAGGGTATTATCTCATCTAGCATGATGGCTATGTCATCGGCCCAAGTGTACGGCATCAGTCCAGCTTGACAGAGCTTCAGGTTTTTTTTTTTTGTGGCATACTTTCTTCTAAGGCTCTTTTTGGTTCCCTAGAATTTAAAGAAATGTGTTCCATTAACATTTCTACAAGCATTATAATCAATAGCAATTGCATTG ]
[+] EMBL CA760762 [ ttTTTTTTTTTTTTGGGGCATACTTTCTTCTAAGGCTCTTTTTGGTTCCCTAGAATTTAAAGAAATGTGTTCCGTTAACATTTCTACAAGCATTATAATCAATAGCAATTGCATTGTGAATTAAGGAAGACGAGCCTTATTTTCAAACTTTTCAAAATGCTACTAAATTATGAAAGTTCTTCAAACGCTTTTCAGCATTGGTTACCACCAATCGATGCCCTTGCATTCGATGACACTTTCTTCAAATATGCAACCAATTGGTGCTCATTAAAGTTGCCCAAAATCATCGTCACAATTACCACATTTACTGATATAGTAAAATCATTCTTAGAACACAGCATATCTGCATTGCCCCTTTTTTTCTTGGGGACTCTTGTTTCTCTGGAACGGTATTGCATGTGCAGTCTCCACTTATTTCAAGTTAATTTATCAATTTTTAACTTCTTTCACCAAACAAACCAATGATGCTTGTACACTCTACCTTCCACTTTTGATGGTTGCAATGGTTGGTGTTTATGGAAGACGAANAGAACCGTGGAAACGTCTACCGCTCTNCAGATTGGTGAAGAACAAATCAAGTGCAATTGTGCAATATGGAAGGTTCACTACTCTAGTTCCTTGTCAATGCCTTTATGGTAACACCAATTCCATCATGCTTAATGTATGCTTAATA]
consensusID : consensus_10737#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 890 fasta sequence
[CGAGGACGAGACAAGGGGGAATCGAGGATATTAAGAAAGCTAAGGTTCGTACCGTGATTCCAGCTGGCACATCATTCCAGGAGGACTGTGCTCGTATTCTACGTGCAATCAGAATTGCAGCTCGTTTAGGGTTCAACTTTCCAAAAGAAACTGCTTATTATGTGCGAACTCTTGCCTGCTCTGTGGCAAGACTTGATAAGGGAAGAATACTCATGGAGATCAACTATATGCTTGCTTATGGTTCAGCTGAAGCTTCTTTAAGGTTGCTTTGGAGATTCGGTCTTCTTGAACACCTGCTGCCTTTTCAGGCAGCATATTTTTCTTCAACTCGTTTTAAGAGGAAGGATAAAGGAACTAACATGCTACTGGTCTTATTTTCTAAATTGGATAATTTTCTTGCTCCTAACAGGCCATGCCATAATAGTTTGTGGATAAGTATTTTAGCACTTCATGAAGCATTAGTACGCCAACCGCGTGATCCTTTAGTGGTAGCTACTTTTGCCCTAGCTCTATACCTTGGAGGTGATATGTCATTGGCACTAGATATTGGAAAATCAATCAACCGTCAACATAATACCGGATTTTCAGAGCTATTAGAACCCCAAGTCTGGGATGATAAGCATTTGGTAGGTGAGGTGCAAAGCCTAGCTGTCTCAATGCGGCGGGCATTAACTGAAATGACTGATGAATATTTTGGTGCAAATGCTATGGCAAAATTCCTCAGGCACCATCCTCAGATCTTGNATTCATNCCACTACAAGCCTACCTAAAGGNTCTCAAATTAATTGAATGNGTTCAACATGGGNAAAAAGGAGCATGGCTNTGAACCGAANAGAGATGGGAANATTGATTNTCATGGATCTATCTTATGGGACANCCGGCANAAGNAA]
[+] EMBL CA766926 [CGAGGACGAGACAAGGGGGAATCGAGGATATTAAGAAAGCTAAGGTTCGTACCGTGATTCCAGCTGGCACATCATTCCAGGAGGACTGTGCTCGTATTCTACGTGCAATCAGAATTGCAGCTCGTTTAGGGTTCAACTTTCCAAAAGAAACTGCTTATTATGTGCGAACTCTTGCCTGCTCTGTGGCAAGACTTGATAAGGGAAGAATACTCATGGAGATCAACTATATGCTTGCTTATGGTTCAGCTGAAGCTTCTTTAAGGTTGCTTTGGAGATTCGGTCTTCTTGAACACCTGCTGCCTTTTCAGGCAGCATATTTTTCTTCAACTCGTTTTAAGAGGAAGGATAAAGGAACTAACATGCTACTGGTCTTATTTTCTAAATTGGATAATTTTCTTGCTCCTAACAGGCCATGCCATAATAGTTTGTGGATAAGTATTTTAGCACTTCATGAAGCATTAGTACGCCAACCGCGTGATCCTTTAGTGGTAGCTACTTTTGCCCTAGCTCTATACCTTGGAGGTGATATGTCATTGGCACTAGATATTGGAAAATCAATCAACCGTCAACATAATACCGGATTTTCAGAGCTATTAGAACCCCAAGTCTGGGATGATAAGCATTTGGTAGGTGAGGTGCAAAGCCTAGCTGTCTCAATGCGGCGGGCATTAACTGAAATGACTGATGAATATTTTGGTGCAAATGCTATGGCAAAATTCCTCAGGCACCATCCTCAGATCTTGNATTCATNCCACTACAAGCCTACCTAAAGGNTCTCAAATTAATTGAATGNGTTCAACATGGGNAAAAAGGAGCATGGCTNTGAACCGAANAGAGATGGGAANATTGATTNTCATGGATCTATCTTATGGGACANCCGGCANAAGNAA]
consensusID : consensus_10737#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 706 fasta sequence
[AGGTGATTCAAGTGGACCTTCTGCGACAAGTTAATATTGCCGTGTTGCAACTTTGTATGCTGCAGGCTTTCAAAATAAATGGCAGCCCTTGTTTCTTGTGCTCTGCTTGTTTTATTTGTGTTTGCTTTCCATAACAGAATTTTGTTCATGTGCACTTTAATTTTGTGATGGAGGTCATTATGAATTACTTTTAAATTCTTGATCATGGAAAATTTTATCAATTCAAATTCAACTTTTTCACTAGCTGTGTGTAAACTGTAAAGCTTAGCTTGTTTAAGTTTTTTATTGTTAAATCTGGATTAATCAGGAGTAAGGTGTTTATTTTCTTTTGAAATCATCAATTTCATGTTTTGGTGGTATGCTGCTAATTGAGATATGCACAATGTATTTCAATGTAGCTTTAGTTGCTAATTTGTTTGTTGTGTATGCAGGTCTTATTTTCTAAATTGGATAATTTTCTTGCTCCTAACAGGCCATGCCATAATAGTTTGTGGTGAGATATGCATTATTCAACTTGCTATTTATAACCGAGGCCAAAATTTATACATTGATTGCTTTATTTCTAGCTGTTTGGATTGTTTAAACTGACAAAGATGGAATTTATGAAGCT-AGTATGAATGCTACTCAAGAACTAAATGTTTCAAACTTCTTTTGAAAAGCA-CATGTTTTTATTTGAGATTACTTGGATTCACNATATTCTGCAAAT]
[+] EMBL CF307055 [AGGTGATTCAAGTGGACCTTCTGCGACAAGTTAATATTGCCGTGTTGCAACTTTGTATGCTGCAGGCTTTCAAAATAAATGGCAGCCCTTGTTTCTTGTGCTCTGCTTGTTTTATTTGTGTTTGCTTTCCATAACAGAATTTTGTTCATGTGCACTTTAATTTTGTGATGGAGGTCATTATGAATTACTTTTAAATTCTTGATCATGGAAAATTTTATCAATTCAAATTCAACTTTTTCACTAGCTGTGTGTAAACTGTAAAGCTTAGCTTGTTTAAGTTTTTTATTGTTAAATCTGGATTAATCAGGAGTAAGGTGTTTATTTTCTTTTGAAATCATCAATTTCATGTTTTGGTGGTATGCTGCTAATTGAGATATGCACAATGTATTTCAATGTAGCTTTAGTTGCTAATTTGTTTGTTGTGTATGCAGGTCTTATTTTCTAAATTGGATAATTTTCTTGCTCCTAACAGGCCATGCCATAATAGTTTGTGGTGAGATATGCATTATTCAACTTGCTATTTATAACCGAGGCCAAAATTTATACATTGATTGCTTTATTTCTAGCTGTTTGGATTGTTTAAACTGACAAAGATGGAATTTATGAAGCT AGTATGAATGCTACTCAAGAACTAAATGTTTCAAACTTCTTTTGAAAAGCA CATGTTTTTATTTGAGATTACTTGGATTCAC ]
[+] EMBL OSS10953A [ TAGCTTGTTTAAGTTTTTTATTGTTAAATCTGGATTAATCAGGAGTAAGGTGTTTATTTTCTTTTGAAATCATCAATTTCATGTTTTGGTGGTATGCTGCTAATTGAGATATGCACAATGTATTTCAATGTAGCTTTAGTTGCTAATTTGTTTGTTGTGTATGCAGGTCTTATTTTCTAAATTGGATAATTTTCTTGCTCCTAACAGGCCATGCCATAATAGTTTGTGGTGAGATATGCATTATTCAACTTGCTATTTATAACCGAGGCCAAAATTTATACATTGATTGCTTTATTTCTAGCTGTTTGGATTGTTTAAACTGACAAAGATGGAATTTATGAAGNTAAGTATGAATGCTACTCAAGGACNAAATGGTTCAAACTTCTTTTGAAAAGCACCATG TTTTATTTGGGGTACCTTGG TTCACNATATTCTGCAAAT]
consensusID : consensus_10737#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 697 fasta sequence
[GCCTGATGAATATTTTGTGGCAAATGTTATGGCAAAATTCCTCAGGCACCATCCTCAGATCTTGTATTCATCCCACTACAAGCCTACCTAAAGGTTCTCAAATTAATTGAATGTGTTCAACATGGGAAAAAGGAGCATGGCTATGAACCGAAGAGAGATGGAAATATTGATTATCATGATCTATCTTATGGTACACCTGCAGAAGTAAGAAATGTCTTTACACTGGTTGTTTTCGACACATTATACCCCTCAAATACGGAGAATCAGCAGGATGTCAGCTCTTGAAGATAAAACTCTTGGCGTGATCATGAATAATTCAGGGGTTTGCAGTGGAT-ATGCTGCAGCCTACAGGCTGCAGCTTAGACCAAACATCACAGGGATGGCCTACTGGAGTAGCTTCCACATCTTGAATGGCTTGAGCCCCTTTATGAAATCCCGGCAGAACAGCAGGTCAAATTACCGGATATGTTGCTCAGGGTATTATTTTATCTAGCATGATGGCTATGTTATCGGCCCAAGTGTACGGCATCAGTCCAGCTTGACAGAGCTTCAGGTTTTTTTTTTTTTTGTGGCATACTTTCTTTTAAGGCTCTTTTTGGTTCCCTAGAATTTAAAGAAATGTGTTCCGTTAACATTTCTACAAGCATTATAATCAATAGCAATTGCATTGTGAATTAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA759664 [GCCTGATGAATATTTTGTGGCAAATGTTATGGCAAAATTCCTCAGGCACCATCCTCAGATCTTGTATTCATCCCACTACAAGCCTACCTAAAGGTTCTCAAATTAATTGAATGTGTTCAACATGGGAAAAAGGAGCATGGCTATGAACCGAAGAGAGATGGAAATATTGATTATCATGATCTATCTTATGGTACACCTGCAGAAGTAAGAAATGTCTTTACACTGGTTGTTTTCGACACATTATACCCCTCAAATACGGAGAATCAGCAGGATGTCAGCTCTTGAAGATAAAACTCTTGGCGTGATCATGAATAATTCAGGGGTTTGCAGTGGAT ATGCTGCAGCCTACAGGCTGCAGCTTAGACCAAACATCACAGGGATGGCCTACTGGAGTAGCTTCCACATCTTGAATGGCTTGAGCCCCTTTATGAAATCCCGGCAGAACAGCAGGTCAAATTACCGGATATGTTGCTCAGGGTATTATTTTATCTAGCATGATGGCTATGTTATCGGCCCAAGTGTACGGCATCAGTCCAGCTTGACAGAGCTTCAGGTTTTTTTTTTTTTTGTGGCATACTTTCTTTTAAGGCTCTTTTTGGTTCCCTAGAATTTAAAGAAATGTGTTCCGTTAACATTTCTACAAGCATTATAATCAATAGCAATTGCATTGTGAATTAAAAAAAAAAAAAAAAA ]
[+] EMBL AU086001 [ AAGTAAGNAATGTCTTTNCACTGGTCGTCTTCAACACATTATNCCCCTCAAATNCGGAGAATCAGCAGGATGTCAGCTCTTGAAGATGAAACTCTTGGCGTGATCATGAATAATTCAGGGGTTTGCAGTGGATCCTCGTGCAGCCTACAGGCTGCAGNTTAGNCCAAACATCACAGGGATGGCCTACTGAAGTAGCTTCCACATCTTGAATGGCTTGAGCTCCTTTATGAAATCNCGGNAGAACNGCAGGTCAAATTGCTGGATATGTTGCTCAGGGTATTATCTCATCTAGCATGATGGCTATGTCATCGGCCCAAGTGTACGGCATCAGTCCAGCTTGACAGAGCTTCAGG TTTTTTTTTTTTTGTGGCATACTTTCTTCTAAGGCTCTTTTTGGTTCCCTAGAATTTAAAGAAATGTGTTCCATTAACATTTCTACAAGCATTATAATCAATAGCAATTGCATTGTGAATTAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10737#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 300 fasta sequence
[TTAGACCCAACATCACAGGGATGGCCCACTGAAGGAGGTTCCCCATTTTGAATGGCTTGAGGTCCTTTATGAAATCCCGGCAGAACAGCAGGTCAAATTGCTGGAAATGTTGGTCAGGGGATTATTTCATTTAGCATGATGGCTAAGTCATCGGCCCAAGTGTAAAAAAACAGTCCAGCTTGACAGAGGTTCAGGTTTTTTTTTTTTTGTGGCAAACTTTTTTTTAAGGCTTTTTTTGGTTCCCTAGAATTTAAAAAAATGTGTTCCATTAACATTTTTACAAGCATTATAATCGAAAGC]
[-] EMBL CB638704 [TTAGACCCAACATCACAGGGATGGCCCACTGAAGGAGGTTCCCCATTTTGAATGGCTTGAGGTCCTTTATGAAATCCCGGCAGAACAGCAGGTCAAATTGCTGGAAATGTTGGTCAGGGGATTATTTCATTTAGCATGATGGCTAAGTCATCGGCCCAAGTGTAAAAAAACAGTCCAGCTTGACAGAGGTTCAGGTTTTTTTTTTTTTGTGGCAAACTTTTTTTTAAGGCTTTTTTTGGTTCCCTAGAATTTAAAAAAATGTGTTCCATTAACATTTTTACAAGCATTATAATCGAAAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 CTCCTCTCGCCGCCGCCGCCGCCGCCGGGATGGCGCTGCGCACGCCGGAGCTGCGCTTCG 60
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 CCGCCGCGGCGGGGCTCGGGGCGCTCTCGCGCCCATCCCGCGTCGCGCCGTCCCCGCTCG 120
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 CCGCGCTGGCGGCGCCGCGCCGGCGCAGGCGCCGCTCCCCGTCGCCCTCCCCCGCGCCCT 180
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 CCGACTCCGACTCCAACCCCGCCTCCTCCGCCCCCGCGAACGCCGGTGGGGCGGCGGCGG 240
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 CGGCGGAGGCGCCGGAGTGGAAGAAGGTGAGCGCGAAGCGGTTCGGGATCAAGGACTCCA 300
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TGATCCCCGACGAGGCCTGGAACGTCCTCCACCGCCTCCGCAGCAGAGGATATGATGTCT 360
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 ACCTGGTTGGTGGTTGTGTTCGAGATCTCATAATGAAGAAAACCCCAAAAGATTTTGACA 420
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TAATAACCACAGCTGATCTTAGGCAGGTGAAAGACACTTTCTCAGGATCAGCTGTTATAG 480
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TAGGAAGGCGGTTCCCAATATGTCATGTATATGAGAACAATTCAATTGTTGAGGTGTCAA 540
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 GTTTTAACACTTATGCACGAGGGTCAACTAGCAATCAAATTTACACGTCCAAGAGCCCCC 600
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 ATTGTAGCAAAAATGATTATATCCGATGGAAAAATTGCCAAGGGAGGGACTTCACTATAA 660
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 ACGGGTTAATGTTCAATCCATATGCAGAAAAGATCTACGACTACTTCGGAGGAATCGAGG 720
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 ATATTAAGAAAGCTAAGGTTCGTACCGTGATTCCAGCTGGCACATCATTCCAGGAGGACT 780
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 GTGCTCGTATTCTACGTGCAATCAGAATTGCAGCTCGTTTAGGGTTCAACTTTCCAAAAG 840
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 AAACTGCTTATTATGTGCGAACTCTTGCCTGCTCTGTGGCAAGACTTGATAAGGGAAGAA 900
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TACTCATGGAGATCAACTATATGCTTGCTTATGGTTCAGCTGAAGCTTCTTTAAGGTTGC 960
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TTTGGAGATTCGGTCTTCTTGAACACCTGCTGCCTTTTCAGGCAGCATATTTTTCTTCAA 1020
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 CTCGTTTTAAGAGGAAGGATAAAGGAACTAACATGCTACTGGTCTTATTTTCTAAATTGG 1080
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 ATAATTTTCTTGCTCCTAACAGGCCATGCCATAATAGTTTGTGGATAAGTATTTTAGCAC 1140
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TTCATGAAGCATTAGTACGCCAACCGCGTGATCCTTTAGTGGTAGCTACTTTTGCCCTAG 1200
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 CTCTATACCTTGGAGGTGATATGTCATTGGCACTAGATATTGGAAAATCA--ATCAACCG 1258
consensus_10737#1 ---CGAGGACGAGACAAGGGGGAATCGAGGATATTAAGAAAGCTAAGGTT--CGTACCGT 55
consensus_10737#2 ------AGGTGATTCAAGTGGACCT------TCTGCGACAAGTTAATATTGCCGTGTTGC 48
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TCAACATAATACCGGATTTTCAGAGCTATTAGA--ACCCCAAGTCTGGGATGATAAGCAT 1316
consensus_10737#1 GATTCCAGCTGGCACATCATTCCAGGAGGACTG--TGCTCGTATTCTACGTGCAATCAGA 113
consensus_10737#2 AACTTTGTATGCTGCAGGCTTTCAAAATAAATGGCAGCCCTTGTTTCTTGTGCTCT---G 105
consensus_10737#3 --------------------------------------------------------GCCT 4
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TTGGTAGGCGAGGTGCAAAGCCTAGCTGTCTCAATGCGGCGGGCATTAACTGAAATGACT 1376
consensus_10737#1 ATTGCAGCTCGTTTAGGGTTCAACTTTCCAAAAGAAACTGCTTATTATGTGCGAACTCTT 173
consensus_10737#2 CTTGT--TTTATTTGTGTTT--GCTTTCCATAACAGAATTTTGTTCATGTGC--ACTTT- 158
consensus_10737#3 GATGAATATTTTGTGGCAAATGTTATGGCAAAA-TTCCTCAGGCACCATCCTCAGATCTT 63
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 GATGAATATTTTGTTGCAAATGCTATGGCAAAAATTCCTCAGGCACCATCCTCAGATCTT 1436
consensus_10737#1 GCCTGCTCTGTGGCAAGACTTGATAAGGGAAGAATACTCATGGAGATCAACTATATGCTT 233
consensus_10737#2 ----------------AATTTTGTGATGGAGG--TCATTATGAATTACTTTTAAATTCTT 200
consensus_10737#3 GTATTCATCCCACTACAAGCCTACCTAAAGGTTCTCAAATTAATTGAATGTGTTCAACAT 123
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 GTATTCATCCCACTACAAGCCTACCTAAAGGTTCTCAAATTAATTGAATGTGTTCAACAT 1496
consensus_10737#1 GCTTATGGTTCAGCTGAAGCTTCTTTAAGGTTGCTTTGGAGATTCGGTCTTCTTGAACAC 293
consensus_10737#2 GATCATGG-------AAAATTTTATCAA--------TTCAAATTCAA-CTTTTTCACTAG 244
consensus_10737#3 GGGAAAAAGGAGCATGGCTATGAACCGAAGAGAGATGGAAATATTGATTATCATGATCTA 183
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 GGGAAAAAGGAGCATGGCTATGAACCGAAGAGAGATGGAAATATTGATTATCATGATCTA 1556
consensus_10737#1 CTGCTGCCTTTTCAGGCAGCATATTTTTCTTCAACTCGTTTTAAGAGGAAGGATAAAGGA 353
consensus_10737#2 CTGTGTGTAAACTGTAAAGCTTAGCTTGTTTAAGTT--TTTTATTGTTAAATCTGGATTA 302
consensus_10737#3 TCTTATGGTACACCTGCAGAAGTAAGAAATGTCTTTACACTGGTTGTTTTCGACACATTA 243
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TCTTATGGTACACCTGCAGAAGTAAGAAATGTCTTTACACTGGTCGTCTTCAACACATTA 1616
consensus_10737#1 ACTAACATGCTACTGGTCTTATTTTCTAAATTGGATAATTTTCTTGCTCCTAACAGGCCA 413
consensus_10737#2 ATCAGGAGTAAGGTGTTTATTTTCTTTTGAAATCATCAATTTCATGTTTTGGTGGTATGC 362
consensus_10737#3 TACCCCTCAAATACGGAGAATCAGCAGGATGTCAGCTCTTGAAGA--TAAAACTCTTGGC 301
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TACCCCTCAAATACGGAGAATCAGCAGGATGTCAGCTCTTGAAGA--TGAAACTCTTGGC 1674
consensus_10737#1 TGCCA-TAATAGTTTGTGGATAAGTATTTTAGCACTTCATGAAGCATTAGTACGCCAACC 472
consensus_10737#2 TGCTAATTGAGATATGCACA-ATGTATTTCAATGTAGCTTTAGTTGCTAATTTGTTTGTT 421
consensus_10737#3 GTGATCATGAATAATTCAGGGGTTTGCAGTGGATATGCTGCAGCCTACAGGCTGCAGCTT 361
consensus_10737#4 ----------------------------------------------------------TT 2
consensus_10737#0 GTGATCATGAATAATTCAGGGGTTTGCAGTGGATATGCTGCAGCCTACAGGCTGCAGCTT 1734
consensus_10737#1 GCGTGATCCTTTAGTGGTAGCTACTTTTGCCCTAGCTCTATACCTTGGAGGTGATATGTC 532
consensus_10737#2 GTGTATGCAGGTCTTATTTTCTAAATTGGATAATTTTCT-TGCTCCTAACAGGCCATGCC 480
consensus_10737#3 AG----ACCAAACATCACAGGGATGGCCTACTG--GAGTAGCTTCCACATCTTGAATGGC 415
consensus_10737#4 AG----ACCCAACATCACAGGGATGGCCCACTG--AAGGAGGTTCCCCATTTTGAATGGC 56
consensus_10737#0 AG----ACCAAACATCACAGGGATGGCCTACTG--AAGTAGCTTCCACATCTTGAATGGC 1788
consensus_10737#1 ATTGGCACTAGATATTGGAAAATCAATCAACCGTCAACATAATACCGGATTTTCAGAGCT 592
consensus_10737#2 AT----AATAGTTTGTGGTGAGAT------------ATGCATTATTCAACTT-----GCT 519
* * * * * * *
consensus_10737#3 TTGAGCCCCTTTA---TGAAATCCCGGCAGAACAGCAGGTCAAATTACCG-GATATGTTG 471
consensus_10737#4 TTGAGGTCCTTTA---TGAAATCCCGGCAGAACAGCAGGTCAAATTGCTG-GAAATGTTG 112
consensus_10737#0 TTGAGCTCCTTTA---TGAAATCACGGCAGAACAGCAGGTCAAATTGCTG-GATATGTTG 1844
consensus_10737#1 ATTAGAACCCCAAGTCTGGGATGATAAGCATTTGGTAGGTGAGGTGCAAA-GCCTAGCTG 651
consensus_10737#2 ATTTATAACCGAGG--CCAAAATTTATACATTGATTGCTTTATTTCTAGCTGTTTGGATT 577
* * * * * * * * *
consensus_10737#3 -CTCAGGGTATTA--TTTTATCTAGCATGATGGCTATGT-TATCGGCCCAAGTGTACGGC 527
consensus_10737#4 -GTCAGGGGATTA--TTTCATTTAGCATGATGGCTAAGT-CATCGGCCCAAGTGTAAAAA 168
consensus_10737#0 -CTCAGGGTATTA--TCTCATCTAGCATGATGGCTATGT-CATCGGCCCAAGTGTACGGC 1900
consensus_10737#1 TCTCAATGCGGCGGGCATTAACTGAAATGACTGATGAATATTTTGGTGCAAATGCTATGG 711
consensus_10737#2 GTTTAAACTGACA-----AAGATGGAATTTATGAAGCTAGTATGAATGCTACT-CAAGAA 631
* * * * ** * * * * *
consensus_10737#3 ATCAGTCCAGCTTGACAGAGCTTCAGGTTTTTTTTTT-TTTTGTGGCATACTTTCTTTTA 586
consensus_10737#4 AACAGTCCAGCTTGACAGAGGTTCAGGTTTTTTTTTT-TTT-GTGGCAAACTTTTTTTTA 226
consensus_10737#0 ATCAGTCCAGCTTGACAGAGCTTCAGGTTTTTTTTTT-TT--GTGGCATACTTTCTTCTA 1957
consensus_10737#1 CAAAATTCCTCAGGCACCATCCTCAGATCTTGNATTCATNCCACTACAAGCCTACCTAAA 771
consensus_10737#2 CTAAATGTTTCAAACTTCTTTTGAAAAGCACATGTTTTTA----TTTGAGATTACTTGGA 687
* * * * ** * * * *
consensus_10737#3 AGG-CTCTTTTTGGTTCCCTAGAATT--------TAAAGAAATGTGTTCCGTTAACATTT 637
consensus_10737#4 AGG-CTTTTTTTGGTTCCCTAGAATT--------TAAAAAAATGTGTTCCATTAACATTT 277
consensus_10737#0 AGG-CTCTTTTTGGTTCCCTAGAATT--------TAAAGAAATGTGTTCCATTAACATTT 2008
consensus_10737#1 GGNTCTCAAATTAATTGAATGNGTTCAACATGGGNAAAAAGGAGCATGGCTNTGAACCGA 831
consensus_10737#2 TTC-ACNATATTCTGCAAAT---------------------------------------- 706
** *
consensus_10737#3 CTACAAGCATTATAATCAATAGCAATTGCATTGTGAATTAAAAAAAAAAAAAAAAAAAAA 697
consensus_10737#4 TTACAAGCATTATAATCGAAAGC------------------------------------- 300
consensus_10737#0 CTACAAGCATTATAATCAATAGCAATTGCATTGTGAATTAAGGAAGACGAGCCTTATTTT 2068
consensus_10737#1 ANAGAGATGGGAANATTGATTNTCATGGATCTATCTTATGGGACANCCGGCANAAGNAA- 890
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 CAAACTTTTCAAAATGCTACTAAATTATGAAAGTTCTTCAAACGCTTTTCAGCATTGGTT 2128
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 ACCACCAATCGATGCCCTTGCATTCGATGACACTTTCTTCAAATATGCAACCAATTGGTG 2188
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 CTCATTAAAGTTGCCCAAAATCATCGTCACAATTACCACATTTACTGATATAGTAAAATC 2248
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 ATTCTTAGAACACAGCATATCTGCATTGCCCCTTTTTTTCTTGGGGACTCTTGTTTCTCT 2308
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 GGAACGGTATTGCATGTGCAGTCTCCACTTATTTCAAGTTAATTTATCAATTTTTAACTT 2368
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 CTTTCACCAAACAAACCAATGATGCTTGTACACTCTACCTTCCACTTTTGATGGTTGCAA 2428
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TGGTTGGTGTTTATGGAAGACGAANAGAACCGTGGAAACGTCTACCGCTCTNCAGATTGG 2488
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 ------------------------------------------------------------
consensus_10737#4 ------------------------------------------------------------
consensus_10737#0 TGAAGAACAAATCAAGTGCAATTGTGCAATATGGAAGGTTCACTACTCTAGTTCCTTGTC 2548
consensus_10737#1 ------------------------------------------------------------
consensus_10737#2 ------------------------------------------------------------
consensus_10737#3 --------------------------------------------------
consensus_10737#4 --------------------------------------------------
consensus_10737#0 AATGCCTTTATGGTAACACCAATTCCATCATGCTTAATGTATGCTTAATA 2598
consensus_10737#1 --------------------------------------------------
consensus_10737#2 --------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||