These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10746#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1872 fasta sequence [AGTTTGAGGGTCGAGATACCCGGTTTTGTGGTCTAGGGTCACGGATTAAGGGTCACAAAGTGAACTTATTCCTCGTCTCGAACACTGGGAGGAAACCCGGCCCACAAACCTAATGATGCCAATTTGTAGGCCCGTCCCGGCCCGGCCCACTTGCAGTCTGACACCTACTTGCCTTTGCCTTAATCCTCCTCTCTCTCTCTCTCTCTGTAGTTTTCCCCTTTGGTTTTGCTCTGCCGTACGCCTCTCCAACTCGAATCATCCCATCTGTCGGTGATTTCCGTCCAATCTTTGATCGGATTCCGGGGGCCCTCATCATCGTCGAGCTCTTCGGTCGTTCGATCGGGCGCGCGAAATTCTTCCGGCGCTGATTTTGACGGCTCCGGCCGCCGGCGGCGGTTGGTTGGTTGGTTCTTGGCCCGGATTTTCGGGGAGATTTGAGGGGGCAGGTTTCTCCTCGCCCCGCGGTGGCTGTGTGGGTTCTTGGATTCGTTGTTTGGTGACTGTTTAAGCGGGGATGGAGCGGCGGAGATGGCTGCAGGCCGCGGTTCTGTGTTGCCTGCTGGTGCTTTGCTCCGGGAGAGAACTTAAGACTAAACACACCCCAATATACAACTCGACCTTAGCCAGGACGCTTGCGGAATATACATCAGCAGTTTATACAGCTGACTTGACACAACTCTTTTCGTGGACCTGTGAAAGGTGTTGTGACTTAACAGAGGGGTTTGAGGTAATAGAACTGATCGTCGATGTGAAAAATTGCTTGCAGGCA-TATGTTGGTTATGCTAGTGATATGAATGCTGTCGTAGTTGTGTTCAGAGGCACTCAAGAGACCAGCATTCAGAATTGGATAGAGGACTTGTTTTGGAAACAACTTGATCTGGACTACCCAGGCATGCCTCAAGCAAAGGTCCACAGTGGGTTTTATTCTGCATACCATAACACGACATTGCGCGATGGTGTTGTCAATGGCATTAAGAAAACTAGGGAAGCATATGGTAATATTCCCATCATGGTAACTGGGCATTCGATGGGAGGAGCTATGGCTTCGTTTTGTGCGCTTGACCTTGTGGTCAACTACAGGTTAAAGGATGTGACACTGATAACATTTGGACAACCTCGGATTGGAAATGCTGTGTTTGCTTCACATTTTAAGTGTCATTTGCCAAATGCGATTCGAGTGACTAATGCGCACGATATTGTTCCTCATTTACCCCCATACTACCACTACTTCCCACAGAAAACCTATCATCATTTCCCACGAGAGGTATGGGTTCATAATGTTGGACTTGGAAGCCTAGTCTATTCAATAGAGCAAATTTGTGATGACTCTGGAGAAGACCCAACTTGCAGCAGGTCTGTGAGTGGAAACAGTGTGCAAGACCATATAAACTACCTTGGCATCAGCATGCATGCCGAGGCATCGGGATCTTGCAGAATTGTCACAGGTGACAATAAACTGCAGTATAAGATGGACAGCGATGGCAACATTGTTTTCTCGAAGCAACCTGGTTTATCAGTTGATCAGTTGCATAGTTCACAGTGAGCAAACTCATGATGACAGGAATCTTCCATGCCCTCTATGTAACTGTATGATCACACCACAGGAGGATATTGGAAGAACAAATTTGTGTATAGTTCTTTGTACAGCATGTAAAGCATTATAGATACTGTACGAACGTGCTCTTGGCTGGACTAATTTATCATGAGAATGTCATGCAAAAGCTTTTCCAAGCAGAACCATGCCAATTATCATGTTCTTATTTCTGTGTATTTTTAGGCATGGCATTGGCAGCTGATTCTCATTGTGTTGCACCATGCATACTTGCCTTTCACCTTCAATTCAAGGTTCAGCTTTCATCCTCAAAAAAAAAA] [+] EMBL AK068781 [AGTTTGAGGGTCGAGATACCCGGTTTTGTGGTCTAGGGTCACGGATTAAGGGTCACAAAGTGAACTTATTCCTCGTCTCGAACACTGGGAGGAAACCCGGCCCACAAACCTAATGATGCCAATTTGTAGGCCCGTCCCGGCCCGGCCCACTTGCAGTCTGACACCTACTTGCCTTTGCCTTAATCCTCCTCTCTCTCTCTCTCTCTGTAGTTTTCCCCTTTGGTTTTGCTCTGCCGTACGCCTCTCCAACTCGAATCATCCCATCTGTCGGTGATTTCCGTCCAATCTTTGATCGGATTCCGGGGGCCCTCATCATCGTCGAGCTCTTCGGTCGTTCGATCGGGCGCGCGAAATTCTTCCGGCGCTGATTTTGACGGCTCCGGCCGCCGGCGGCGGTTGGTTGGTTGGTTCTTGGCCCGGATTTTCGGGGAGATTTGAGGGGGCAGGTTTCTCCTCGCCCCGCGGTGGCTGTGTGGGTTCTTGGATTCGTTGTTTGGTGACTGTTTAAGCGGGGATGGAGCGGCGGAGATGGCTGCAGGCCGCGGTTCTGTGTTGCCTGCTGGTGCTTTGCTCCGGGAGAGAACTTAAGACTAAACACACCCCAATATACAACTCGACCTTAGCCAGGACGCTTGCGGAATATACATCAGCAGTTTATACAGCTGACTTGACACAACTCTTTTCGTGGACCTGTGAAAGGTGTTGTGACTTAACAGAGGGGTTTGAGGTAATAGAACTGATCGTCGATGTGAAAAATTGCTTGCAGGCA TATGTTGGTTATGCTAGTGATATGAATGCTGTCGTAGTTGTGTTCAGAGGCACTCAAGAGACCAGCATTCAGAATTGGATAGAGGACTTGTTTTGGAAACAACTTGATCTGGACTACCCAGGCATGCCTCAAGCAAAGGTCCACAGTGGGTTTTATTCTGCATACCATAACACGACATTGCGCGATGGTGTTGTCAATGGCATTAAGAAAACTAGGGAAGCATATGGTAATATTCCCATCATGGTAACTGGGCATTCGATGGGAGGAGCTATGGCTTCGTTTTGTGCGCTTGACCTTGTGGTCAACTACAGGTTAAAGGATGTGACACTGATAACATTTGGACAACCTCGGATTGGAAATGCTGTGTTTGCTTCACATTTTAAGTGTCATTTGCCAAATGCGATTCGAGTGACTAATGCGCACGATATTGTTCCTCATTTACCCCCATACTACCACTACTTCCCACAGAAAACCTATCATCATTTCCCACGAGAGGTATGGGTTCATAATGTTGGACTTGGAAGCCTAGTCTATTCAATAGAGCAAATTTGTGATGACTCTGGAGAAGACCCAACTTGCAGCAGGTCTGTGAGTGGAAACAGTGTGCAAGACCATATAAACTACCTTGGCATCAGCATGCATGCCGAGGCATCGGGATCTTGCAGAATTGTCACAGGTGACAATAAACTGCAGTATAAGATGGACAGCGATGGCAACATTGTTTTCTCGAAGCAACCTGGTTTATCAGTTGATCAGTTGCATAGTTCACAGTGAGCAAACTCATGATGACAGGAATCTTCCATGCCCTCTATGTAACTGTATGATCACACCACAGGAGGATATTGGAAGAACAAATTTGTGTATAGTTCTTTGTACAGCATGTAAAGCATTATAGATACTGTACGAACGTGCTCTTGGCTGGACTAATTTATCATGAGAATGTCATGCAAAAGCTTTTCCAAGCAGAACCATGCCAATTATCATGTTCTT ] [+] EMBL CF276530 [ CCCCTTTGGTTTTGCTCTGCCGTACGCCTCTCCAACTCGAATCATCCCATCTGTCGGTGATTTCCGTCCAATCTTTGATCGGATTCCGGGGGCCCTCATCATCGTCGAGCTCTTCGGTCGTTCGATCGGGCGCGCGAAATTCTTCCGGCGCTGATTTTGACGGCTCCGGCCGCCGGCGGCGGT ] [+] EMBL CF277191 [ CCCCTTTGGTTTTGCTCTGCCGTACGCCTCTCCAACTCGAATCATCCCATCTGTCGGTGATTTCCGTCCAATCTTTGATCGGATTCCGGGGGCCCTCATCATCGTCGAGCTCTTCGGTCGTTCGATCGGGCGCGCGAAATTCTTCCGGCGCTGATTTTGACGGCTCCGGCCGCCGGCGGCGGTTGGTTGGTTGGTTCTTGGCCCGGATTTTCGGGGAGATTTGAGGGGGCAGGTTTCTCCTCGCCCCGCGGTGGCTGTGTGGGTTCTTGGATTCGTTGTTTGGTGACTGTTTAAGCGGGGATGGAGCGGCGGAGATGGCTGCAGGCCGCGGTTCTGTGTTGCCTGCTGGTGCTTTGCTCCGGGAGAGAACTTAAGACTAAACACACCCCAATATACAACTCGACCTTAGCCAGGACGCTTGCGGAATATACATCAGCAGTTTATACAGCTGACTTGACACAACTCTTTTCGTGGACCTGTGAAAGGTGTTGTGACTTAACAGAGGGGTTTGAGGTAATAGAACTGGTCGTCGATGTGAAAAATTGCTTGCAGGCATTATGTTGGTTATGCTAGTGATATGA ] [+] EMBL CF276611 [ TCATCCCATCTGTCGGTGATTTCCGTCCAATCTTTGATCGGATTCCGGGGGCCCTCATCATCGTCGAGCTCTTCGGTCGTTCGATCGGGCGCGCGAAATTCTTCCGGCGCTGATTTTGACGGCTCCGGCCGCCGGCGGCGGTTGGTTGGTTGGTTCTTGGCCCGGATTTTCGGGGAGATTTGAGGGGGCAGGTTTCTCCTCGCCCCGCGGTGGCTGTGTGGGTTCTTGGATTCGTTGTTTGGTGACTGTTTAAGCGGGGATGGAGCGGCGGAGATGGCTGCAGGCCGCGGTTCTGTGTTGCCTGCTGGTGCTTTGCTCCGGGAGAGAACTTAAGACTAAACACACCCCAATATACAACTCGACCTTAGCCAGGACGCTTGCGGAATATACATCAGCAGTTTATACAGCTGACTTGACACAACTCTTTTCGTGGACCTGTGAAAGGTGTTGTGACTTAACAGAGGGGTTTGAGGTAATAGAACTGATCGTCGATGTGAAAAATTGCTTGCAGGCA TATGTTGGTTATGCTAGTGATATGAATGCTGTCGTAGTTGTGTTCAGAGGCACTCAAGAGACCAGCATTCAGAATTGGATAGAGGACTTGTTTTGGAAACAACTTGATCTGGACTACCCAGGCA ] [-] EMBL CA759796 [ ATACTACCACTACTTCCCACAGAAAACCTATCATCATTTCCCACGAGAGGTATGGGTTCATAATGTTGGACTTGGAAGCCTAGTATATTCAATAGAGCAAATTTGTGATGACTCTGGAGAAGACCCAACTTGCAGCAGGTCTGTGAGTGGAAACAGTGTGCAAGACCATATAAACTACCTTGGCATCAGCATGCATGCCGAGGCATCGGGATCTTGCAGAATTGTCACAGGTGACAATAAACTGCAGTATAAGATGGACAGCGATGGCAACATTGTTTTCTCGAAGCAACCTGGTTTATCAGTTGATCAGTTGCATAGTTCACAGTGAGCAAACTCATGATGACAGGAATCTTCCATGCCCTCTATGTAACTGTATGATCACACCACAGGAGGATATTGGAAGAACAAACTTGTGTATAGTTCTTTGTACAGCATGTAAAGCATTATAGATACTGTACGAACGTGCTCTTGGCTGGACTAATTTATCATGAGAATGTCATGCAAAAGCTTTTCCAAGCAGAACCATGCCAATTATCATGTTCTTATTTCTGTGTATTTTTAGGCATGGCATTGGCAGCTGATTCTCATTGTGTTGCACCATGCATACTTGCCTTTCACCTTCAATTCAAGGTTCAGCTTTCATCCTCAAAAAAAAAA] [-] EMBL CF276531 [ CCCACAGAAAACCTATCATCATTTCCCACGAGAGGTATGGGTTCATAATGTTGGACTTGGAAGCCTAGTCTATTCAATAGAGCAAATTTGTGATGACTCTGGAGAAGACCCAACTTGCAGCAGGTCTGTGAGTGGAAACAGTGTGCAAGACCATATAAACTACCTTGGCATCAGCATGCATGCCGAGGCATCGGGATCTTGCAGAATTGTCACAGGTGACAATAAACTGCAGTATAAGATGGACAGCGATGGCAACATTGTTTTCTCGAAGCAACCTGGTTTATCAGTTGATCAGTTGCATAGTTCACAGTGAGCAAACTCATGATGACAGGAATCTTCCATGCCCTCTATGTAACTGTATGATCACACCACAGGAGGATATTGGAAGAACAAATTTGTGTATAGTTCTTTGTACAGCATGTAAAGCATTATAGATACTGTACGAACGTGCTCTTGGCTGGACTAATTTATCATGAGAATGTCATGCAAAAGCTTTTCCAAGCAAAAaaa ] [-] EMBL CF277192 [ CACAGAAAACCTATCATCATTTCCCACGAGAGGTATGGGTTCATAATGTTGGACTTGGAAGCCTAGTCTATTCAATAGAGCAAATTTGTGATGACTCTGGAGAAGACCCAACTTGCAGCAGGTCTGTGAGTGGAAACAGTGTGCAAGACCATATAAACTACCTTGGCATCAGCATGCATGCCGAGGCATCGGGATCTTGCAGAATTGTCACAGGTGACAATAAACTGCAGTATAAGATGGACAGCGATGGCAACATTGTTTTCTCGAAGCAACCTGGTTTATCAGTTGATCAGTTGCATAGTTCACAGTGAGCAAACTCATGATGACAGGAATCTTCCATGCCCTCTATGTAACTGTATGATCACACCACAGGAGGATATTGGAAGAACAAATTTGTGTATAGTTCTTTGTACAGCATGTAAAGCATTATAGATACTGTACGAACGTGCTCTTGGCTGGACTAATTTATCATGAGAATGTCATGCAAAAGCTTTTCCAAGCAAAAaaa ] [-] EMBL CF276612 [ CCCACGAGAGGTATGGGTTCATAATGTTGGACTTGGAAGCCTAGTCTATTCAATAGAGCAAATTTGTGATGACTCTGGAGAAGACCCAACTTGCAGCAGGTCTGTGAGTGGAAACAGTGTGCAAGACCATATAAACTACCTTGGCATCAGCATGCATGCCGAGGCATCGGGATCTTGCAGAATTGTCACAGGTGACAATAAACTGCAGTATAAGATGGACAGCGATGGCAACATTGTTTTCTCGAAGCAACCTGGTTTATCAGTTGATCAGTTGCATAGTTCACAGTGAGCAAGCTCATGATGACAGGAATCTTCCATGCCCTCTATGTAACTGTATGATCACACCACAGGAGGATATTGGAAGAACAAATTTGTGTATAGTTCTTTGTACAGCATGTAAAGCATTATAGATACTGTACGAACGTGCTCTTGGCTGGACTAATTTATCATGAGAATGTCATGCAAAAGCTTTTCCAAGCAGAACCATGCCAAaaaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||