These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10750#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2441 fasta sequence [GGCCAGTCCAGTCCAGTCCAGTCCAGGACGGTCCAGTCCGGTCCCGTAGAGCGCCGGCGCGTGTAGCTTCCTCCTCCGCTCCAGGCTCCAGCGAGGGAGGGAGGGAGACCACCGTCTCCGCCGGCTTTGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGCGGCGAGATGCGGAAGCGGGATCTGGGCATCCTCCTCCTCGCCGCCTTCGCCGTCTTCTTCTCGCTCCAGCACGACGGCGACCTCTCCTTCCGCGAGGCCTGGTACCACCTCTCCGATGCCGACTACCCCATCAAGCACGACGCCGACCGCCTCCCCTCTCCCCTAGTCGCCGACCTCAACGGCGACGGCAAACCCGAGGTCCTCATCCCCACCCACGACGCCAAGATCCAGGTCCTCCAGCCCCACCCCAGGCCCTCCCCCGACGATGCCTCCTTCCACGACGCCCGCCTCATGGCTGATGTCTCCCTCCTCCCCTCCAACGTTCGCCTCTCCTCCGGGAGGCGCCCCGTCGCCATGGCCGTTGGCACCGTCGACCGCCACTACGCCCACGCCCCCTCCCCCTCCAAGCAGCTCCTCGTCGTCGTCACCTCCGGATGGTCCGTCATGTGCTTCGACCACAACCTCAAAAAGCTCTGGGAGGCTAATCTCCAGGACGATTTCCCCCACGCCGCCCACCATCGCGAGGTTGCCATTTCCATTACCAACTACACTCTCAAGCATGGGGATGCAGGTTTGGTCATCGTCGGAGGAAGGATGGAAATGCAACATCATTCAGCAGAGCTTTTCGATGAATTTATGGTGTCAGAACACAACAGGGAAGAGCACCGTAGAAGCGCCAGTGAGAAGCAGGCTTCTGAGACAGGCAACACAGACCTGCGTCATTTTGCCCTTTATGCTTTTGCTGGCCGCACTGGTGAATTAAGATGGAGCCGAAAGAATGAGAATATCCCATCGCAACCATCCGATGCTTCAGTGCTGATACCACAACACAATTACAAGCTTGATGCCCATGCCCTTAATAGTCGTCATCCTGGTCAGTTCGAATGTCGGGAATTTAGAGAATCAGTTCT-T-GGGGTCATGCCTCATCATTGGGATAGGAGAGAGGATACTTTTCTGCAACTTGCCCATTTTAGGAGGCATAAAAGGAAAGCACTGAAGAAAACACCTGGAAAAGCTGTTGTAAATAACGTGCACAAGCCCAGTGAACATAATCCACCTGGAAAGGATGTTTCCAATAGGTTAGCAAATGTGATTGGGAAAGCTGCAGATATGGCTAATTCAAATAAAATCAAGAAGTCACAAAGGACGCTTTATGTTCCGACAATCACCAACTATACTCAAGTTTGGTGGGTTCCTAATGTTGTTGTTGCCCACGAAAAAGAAGGGATAGAGGCTGTTCATCTAGCTTCTGGACGTACAATCTGCAAGCTTCATTTAACAGAAGGAGGCCTTCATGCAGATATTAATGGAGATGGGGTTCTAGACCATGTTCAGGTTGTTGGTGCAAATGGCATCGAGCAAACAGTTGTTAGTGGTTCAATGGAAGTGCTGAAACCTTGTTGGGCAGTAGCTACATCTGGTGTGCCAGTGCGGGAGCAACTTTTTAATGTTTCTATCTGCCATTACAACAATTTCAATTTGTTTCATCATGGTGACTTTTCAAGAAGTTTTGGGAGGACATTTGATACAACTGGCTTAGAGGTGGCGACTCCTATTCTGCTCCAGAGAGATGATGGTCATAAACACAGGAGAGGAAGCCACGGGGATATCATCTTTCTTACGAGTCGTGGGGAGGTGACCTCGTACTCTCCAGGTCTACTTGGTCATGATGCAATATGGAGATGGCAACTGTCAACAGGTGCAACATGGTCCAACCTTCCGTCTCCATCAGGGATGATGGAAAACATTGTAGTTCCAACTTTGAAGGCTTTCTCTCTGCGAGCCTATGACCCAAAACAGGTAATCATCGCGGGTGGTGATCTGGAGGCTGTGGTGATTTCTCCTTCTGGTGGTTTATTGGCATCCATTGAACTCCCTGCACCTCCAACCCATGCGCTGGTACTTGAAGATTTCAATGGTGATGGTTTAACTGATATTATTCTGGTAACATCGGGGGGAGTCTATGGGTTTGTGCAGACAAGACATCCTGGGGCTCTTTTCTTCAGCACGCTTGTGGGTTGCTTGATAGTTGTTATCGGAGTGATATTTGTTTCACTGCACCTCAACTCCTCGAACAGCGGTAAACCTAGGGCTTCAACCGACTATAGGTGACGACATTATGTCAGTCGACAGAATTCCTTGTCAATATTGAGGTGTTGTTATAGCATTTGATTTAGATTTTTCATATAATCAACTGCCAACTGGGTTATGTAAACTTGTGCGGCGAATGCATTTTAGGGGTAACATGTTGTATGATTTGGGATGTAAAAAAAATAAAAGA] [+] EMBL AK068943 [GGCCAGTCCAGTCCAGTCCAGTCCAGGACGGTCCAGTCCGGTCCCGTAGAGCGCCGGCGCGTGTAGCTTCCTCCTCCGCTCCAGGCTCCAGCGAGGGAGGGAGGGAGACCACCGTCTCCGCCGGCTTTGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGCGGCGAGATGCGGAAGCGGGATCTGGGCATCCTCCTCCTCGCCGCCTTCGCCGTCTTCTTCTCGCTCCAGCACGACGGCGACCTCTCCTTCCGCGAGGCCTGGTACCACCTCTCCGATGCCGACTACCCCATCAAGCACGACGCCGACCGCCTCCCCTCTCCCCTAGTCGCCGACCTCAACGGCGACGGCAAACCCGAGGTCCTCATCCCCACCCACGACGCCAAGATCCAGGTCCTCCAGCCCCACCCCAGGCCCTCCCCCGACGATGCCTCCTTCCACGACGCCCGCCTCATGGCTGATGTCTCCCTCCTCCCCTCCAACGTTCGCCTCTCCTCCGGGAGGCGCCCCGTCGCCATGGCCGTTGGCACCGTCGACCGCCACTACGCCCACGCCCCCTCCCCCTCCAAGCAGCTCCTCGTCGTCGTCACCTCCGGATGGTCCGTCATGTGCTTCGACCACAACCTCAAAAAGCTCTGGGAGGCTAATCTCCAGGACGATTTCCCCCACGCCGCCCACCATCGCGAGGTTGCCATTTCCATTACCAACTACACTCTCAAGCATGGGGATGCAGGTTTGGTCATCGTCGGAGGAAGGATGGAAATGCAACATCATTCAGCAGAGCTTTTCGATGAATTTATGGTGTCAGAACACAACAGGGAAGAGCACCGTAGAAGCGCCAGTGAGAAGCAGGCTTCTGAGACAGGCAACACAGACCTGCGTCATTTTGCCCTTTATGCTTTTGCTGGCCGCACTGGTGAATTAAGATGGAGCCGAAAGAATGAGAATATCCCATCGCAACCATCCGATGCTTCAGTGCTGATACCACAACACAATTACAAGCTTGATGCCCATGCCCTTAATAGTCGTCATCCTGGTCAGTTCGAATGTCGGGAATTTAGAGAATCAGTTCT T GGGGTCATGCCTCATCATTGGGATAGGAGAGAGGATACTTTTCTGCAACTTGCCCATTTTAGGAGGCATAAAAGGAAAGCACTGAAGAAAACACCTGGAAAAGCTGTTGTAAATAACGTGCACAAGCCCAGTGAACATAATCCACCTGGAAAGGATGTTTCCAATAGGTTAGCAAATGTGATTGGGAAAGCTGCAGATATGGCTAATTCAAATAAAATCAAGAAGTCACAAAGGACGCTTTATGTTCCGACAATCACCAACTATACTCAAGTTTGGTGGGTTCCTAATGTTGTTGTTGCCCACGAAAAAGAAGGGATAGAGGCTGTTCATCTAGCTTCTGGACGTACAATCTGCAAGCTTCATTTAACAGAAGGAGGCCTTCATGCAGATATTAATGGAGATGGGGTTCTAGACCATGTTCAGGTTGTTGGTGCAAATGGCATCGAGCAAACAGTTGTTAGTGGTTCAATGGAAGTGCTGAAACCTTGTTGGGCAGTAGCTACATCTGGTGTGCCAGTGCGGGAGCAACTTTTTAATGTTTCTATCTGCCATTACAACAATTTCAATTTGTTTCATCATGGTGACTTTTCAAGAAGTTTTGGGAGGACATTTGATACAACTGGCTTAGAGGTGGCGACTCCTATTCTGCTCCAGAGAGATGATGGTCATAAACACAGGAGAGGAAGCCACGGGGATATCATCTTTCTTACGAGTCGTGGGGAGGTGACCTCGTACTCTCCAGGTCTACTTGGTCATGATGCAATATGGAGATGGCAACTGTCAACAGGTGCAACATGGTCCAACCTTCCGTCTCCATCAGGGATGATGGAAAACATTGTAGTTCCAACTTTGAAGGCTTTCTCTCTGCGAGCCTATGACCCAAAACAGGTAATCATCGCGGGTGGTGATCTGGAGGCTGTGGTGATTTCTCCTTCTGGTGGTTTATTGGCATCCATTGAACTCCCTGCACCTCCAACCCATGCGCTGGTACTTGAAGATTTCAATGGTGATGGTTTAACTGATATTATTCTGGTAACATCGGGGGGAGTCTATGGGTTTGTGCAGACAAGACATCCTGGGGCTCTTTTCTTCAGCACGCTTGTGGGTTGCTTGATAGTTGTTATCGGAGTGATATTTGTTTCACTGCACCTCAACTCCTCGAACAGCGGTAAACCTAGGGCTTCAACCGACTATAGGTGACGACATTATGTCAGTCGACAGAATTCCTTGTCAATATTGAGGTGTTGTTATAGCATTTGATTTAGATTTTTCATATAATCAACTGCCAACTGGGTTATGTAAACTTGTGCGGCGAATGCA ] [+] EMBL CB645545 [ GGCCTTGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGCGGCGAGATGCGGAAGCGGGATCTGGGCATCCTCCTCCTCGCCGCCTTCGCCGTCTTCTTCTCGCTCCAGCACGACGGCGACCTCTCCTTCCGCGAGGCCTGGTACCACCTCTCCGATGCCGACTACCCCATCAAGCACGACGCCGACCGCCTCCCCTCTCCCCTAGTCGCCGACCTCAACGGCGACGGCAAACCCGAGGTCCTCATCCCCACCCACGACGCCAAGATCCAGGTCCTCCAGCCCCACCCCAGGCCCTCCCCCGACGATGCCTCCTTCCACGACGCCCGCCTCATGGCTGATGTCTCCCTCCTCCCCTCCAACGTTCGCCTCTCCTCCGGGAGGCGCCCCGTCGCCATGGCCGTTGGCACCGTCGACCGCCACTACGCCCACGCCCCCTCCCCCTCCAAGCAGCTCCTCGTCGTCGTCACCTCCGGATGGTCCGTCATGTGCTTCGACCACAACCTCAAAAAGCTCTGGGAGGCTAATCTCCAGGACGATTTCCCCCACGCCGCCCACCATCGCGAGGTTGCCATTTCCATTACCAACTACACTCTCAAGCATGGGGATGCAGGTTTGGTCATCGTCGGAGGAAGGATGGAAATGCAACATCATTCAGCAGAGCTTTTCGATGAATTTATGGTGTCAGAACACAACAGGGAAGAGCACCGTAGAAGCGCCAGTGAGAAGCAGG ] [+] EMBL CB668333 [ GAGACCTAGAGAGAGAGAGAGCGGCGAGATGCGGAAGCGGGATCTGGGCATCCTCCTCCTCGCCGCCTTCGCCGTCTTCTTCTCGCTCCAGCACGACGGCGACCTCTCCTTCCGCGAGGCCTGGTACCACCTCTCCGATGCCGACTACCCCATCAAGCACGACGCCGACCGCCTCCCCTCTCCCCTAGTCGCCGACCTCAACGGCGACGGCAAACCCGAGGTCCTCATCCCCACCCACGACGCCAAGATCCAGGTCCTCCAGCCCCACCCCAGGCCCTCCCCCGACGATGCCTCCTTCCACGACGCCCGCCTCATGGCTGATGTCTCCCTCCTCCCCTCCAACGTTCGCCTCTCCTCCGGGAGGCGCCCCGTCGCCATGGCCGGTGGCACCGTCGACCGCCACTACGCCCACGCCCCCTCCCCCTCCAAGCAGCTCCTCGTCGTCGTCACCTCCGGATGGTCCGTCATGTGCTTCGACCACAACCTCAAAAAGCTCTGGGAGGCTAATCTCCAGGACGATTTCCCCCACGCCGCCCACCATCGCGAGGGTGCCATTTCCATTACCAACTACACTCTCAAGCATGGGGATGCAGGTTTGGTCATCGGCGGAGGAAGGATGGAAATGCAACATCATTCAGCACAGCTTTTCGATGAATTTATGGTGTCAGAACACAACAGGGAAGAGCACCGTAGAAGCGCCCGTGAGAAGCA ] [+] EMBL CB671541 [ GGCTTCTGAGACAGGCAACACAGACCTGCGTCATTTTGCCCTTTATGCTTTTGCTGGCCGCACTGGTGAATTAAGATGGAGCCGAAAGAATGAGAATATCCCATCGCAACCATCCGATGCTTCAGTGCTGATACCACAACACAATTACAAGCTTGATGCCCATGCCCTTAATAGTCGTCATCCTGGTCAGTTCGAATGTCGGGAATTTAGAGAATCAGTTCT T GGGGTCATGCCTCATCATTGGGATAGGAGAGAGGATACTTTTCTGCAACTTGCCCATTTTAGGAGGCATAAAAGGAAAGCACTGAAGAAAACACCTGGAAAAGCTGTTGTAAATAACGTGCACAAGCCCAGTGAACATAATCCACCTGGAAAGGATGTTTCCAATAGGTTAGCAAATGTGATTGGGAAAGCTGCAGATATGGCTAATTCAAATAAAATCAAGAAGTCACAAAGGACGCTTTATGTTCCGACAATCACCAACTATACTCAAGTTTGGTGGGTTCCTAATGTTGTTGTTGCCCACGAAAAAGAAGGGATAGAGGCTGTTCATCTAGCTTCTGGACGTACAATCTGCAAGCTTCATTTAACAGAAGGAGGCCTTCATGCAGATATTAATGGAGATGGGGTTCTAGACCATGTTCAGGTTGTTGGTGCAAATGGCATCGAGCAAACAGTTGTTAGTGGTTCAATGGAAGTGCTGAAACCTTGTTGGGCAGTAGCTACATCTGGTGTGCCAGTGCGGGAGCAACTTTTTAATGTTTCTATCTGCCATTACAACAATTTCAATTTGTTTCATCATGGTGACTTTTTCAGA ] [+] EMBL CB672484 [ AGAATCAGTTCTATAGGGGTCATGCCTCATCATTGGGATAGGAGAGAGGATACTTTTCTGCAACTTGCCCATTTTAAGAGGCATAAAAGGAAAGCACTGAAGAAAACACCTGGAAAAGCTGTTGTAAATAACGTGCACAAGCCCAGTGAACATAATCCACCTGGAAAGGATGTTTCCAATAGGTTAGCAAATGTGATTGGGAAAGCTGCAGATATGGCTAATTCAAATAAAATCAAGAAGTCACAAAGGACGCTTTATGTTCCGACAATCACCAACTATACTCAAGTTTGGTGGGTTCCTAATGTTGTTGTTGCCCACCAAAAAGAACGGATAGAGGCTGCTCATCTAGCTTCTGGACGTACAATCTGCAAGCTTCATTTAACAGAAGGAGGCCTTCATGCAGATATTAATGGAGATGGGGTTCTAGACCATGTTCAAGTTGTTGGTGCAAATGGCATCGAGCAAACAGCTGTTAGTGGTTCACTGGAAGTGCTGAAACCTTGTTGGGCAGTAGCTACATCTGGTGTGCCAGTGCGGGAGCAACTTTTTAATGTTTCTATCTGCCATTACAACAATCTCAATTTG ] [-] EMBL CB668334 [ TTGTTTCATCATGGTGACTTTTCAAGAAGTTTTGGGAGGACATTTGATACAACTGGCTTAGAGGTGGCGACTCCTATTCTGCTCCAGAGAGATGATGGTCATAAACACAGGAGAGGAAGCCACGGGGATATCATCTTTCTTACGAGTCGTGGGGAGGTGACCTCGTACTCTCCAGGTCTACTTGGTCATGATGCAATATGGAGATGGCAACTGTCAACAGGTGCAACATGGTCCAACCTTCCGTCTCCATCAGGGATGATGGAAAACATTGTAGTTCCAACTTTGAAGGCTTTCTCTCTGCGAGCCTATGACCCAAAACAGGTAATCATCGCGGGTGGTGATCTGGAGGCTGTGGTGATTTCTCCTTCTGGTGGTTTATTGGCATCCATTGAACTCCCTGCACCTCCAACCCATGCGCTGGTACTTGAAGATTTCAATGGTGATGGTTTAACTGATATTATTCTGGTAACATCGGGGGGAGTCTATGGGTTTGTGCAGACAAGACATCCTGGGGCTCTTTTTTTCAGCACGCTTGTGGGTTGCTTGATAGTTGTTATCGGAGTGATATTTGTTTCACTGCACCTCAACTCCTCGAACAGCGGTAAACCTAGGGCTTCAACCGACTATAGGTGACGACATTATGTCAGTCGACAGAATTCCTTGTCAATATTGAGGTGTTGTTATAGCATTTGATTTAGATTTTTCATATAATCAACTGCCAACTGGGTTATGTAAACTTGTGCGGCGAATGCATTTTAGGGGTAACATGTTGTATGATTTGGGATGTAAAAAAAATAAAAGA] consensusID : consensus_10750#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1787 fasta sequence [CAGCAGCGATGGCAATGGAGAGGCTTATCTCTTCGCCGCTCCTCCCGCGCCGGCCTCCCCGCGCCGCCTTCTCCCGCCCGCCGCCCTCCCTCGCCGCCGCGCCACCCCACCACCGCGCCGGCGGTGCGCCGTCTTCTTCTCGCTCCAGCACGACGGCGACCTCTCCTTCCGCGAGGCCTGGTACCACCTCTCCGATGCCGACTACCCCATCAAGCACGACGCCGACCGCCTCCCCTCTCCCCTAGTCGCCGACCTCAACGGCGACGGCAAACCCGAGGTCCTCATCCCCACCCACGACGCCAAGATCCAGGTCCTCCAGCCCCACCCCAGGCCCTCCCCCGACGATGCCTCCTTCCACGACGCCCGCCTCATGGCTGATGTCTCCCTCCTCCCCTCCAACGTTCGCCTCTCCTCCGGGAGGCGCCCCGTCGCCATGGCCGTTGGCACCGTCGACCGCCACTACGCCCACGCCCCCTCCCCCTCCAAGCAGCTCCTCGTCGTCGTCACCTCCGGATGGTCCGTCATGTGCTTCGACCACAACCTCAAAAAGCTCTGGGAGGCTAATCTCCAGGACGATTTCCCCCACGCCGCCCACCATCGCGAGGTTGCCATTTCCATTACCAACTACACTCTCAAGCATGGGGATGCAGGTTTGGTCATCGTCGGAGGAAGGATGGAAATGCAACATCATTCAGCAGAGCTTTTCGATGAATTTATGGTGTCAGAACACAACAGGGAAGAGCACCGTAGAAGCGCCAGTGAGAAGCAGGCTTCTGAGACAGGCAACACAGACCTGCGTCATTTTGCCCTTTATGCTTTTGCTGGCCGCACTGGTGAATTAAGATGGAGCCGAAAGAATGAGAATATCCCATCGCAACCATCCGATGCTTCAGTGCTGATACCACAACACAATTACAAGCTTGATGCCCATGCCCTTAATAGTCGTCATCCTGGTCAGTTCGAATGTCGGGAATTTAGAGAATCAGTTCTTGGGGTCATGCCTCATCATTGGGATAGGAGAGAGGATACTTTTCTGCAACTTGCCCATTTTAGGAGGCATAAAAGGAAAGCACTGAAGAAAACACCTGGAAAAGCTGTTGTAAATAACGTGCACAAGCCCAGTGAACATAATCCACCTGGAAAGGATGTTTCCAATAGGTTAGCAAATGTGATTGGGAAAGCTGCAGATATGGCTAATTCAAATAAAATCAAGAAGGTATAATGCATGCAGACACAAACACATAGTTCTTACGCACTAGCATGTTGACTGTGTTGTTCTTTTTGTGTTTGGTGTTTTGGGGAGGGGGGAGGGGGGAGGGGGAGTTGCATGAACGCAGTAGTGGTAACGTGCATGGGCCAACGTAGGCACCAGGAGCAGGAGCACTCGTGATTGCACGGCGCACAGAGCTACTCAAGATGGAGAGGATGGTGGCGTGGGGAGGGGAGAGGATAGGATTTGAAATGAGGCAGATCAGTGGAGGCAGTGGTGCTGGCAGTTACTGGGCCAAGATGACATTGTAGGTGGTCGGGTAGAAGGAAAAAGAGAAGATGGCAGGGGCAGTCGAGGGTTCTTAAGAGTGGATTTGGTGTTCACCCAGTAGGAAATGGGTGAAGATTTGCCCAGTAGGGCCTCCCTTACTCTCATTTCAAAATGTATCCTCTCAATTTATCTGCAAGTGTGTTCGTCTTGAAGATACTGTATACTTTCCGATCCATTTACTGTACTCTCAAAATTAGTGTTAAATTGTATCCCTGGAACTATATTCTAAATAAGTAAGAACAGTCAA] [+] EMBL AK070106 [CAGCAGCGATGGCAATGGAGAGGCTTATCTCTTCGCCGCTCCTCCCGCGCCGGCCTCCCCGCGCCGCCTTCTCCCGCCCGCCGCCCTCCCTCGCCGCCGCGCCACCCCACCACCGCGCCGGCGGTGCGCCGTCTTCTTCTCGCTCCAGCACGACGGCGACCTCTCCTTCCGCGAGGCCTGGTACCACCTCTCCGATGCCGACTACCCCATCAAGCACGACGCCGACCGCCTCCCCTCTCCCCTAGTCGCCGACCTCAACGGCGACGGCAAACCCGAGGTCCTCATCCCCACCCACGACGCCAAGATCCAGGTCCTCCAGCCCCACCCCAGGCCCTCCCCCGACGATGCCTCCTTCCACGACGCCCGCCTCATGGCTGATGTCTCCCTCCTCCCCTCCAACGTTCGCCTCTCCTCCGGGAGGCGCCCCGTCGCCATGGCCGTTGGCACCGTCGACCGCCACTACGCCCACGCCCCCTCCCCCTCCAAGCAGCTCCTCGTCGTCGTCACCTCCGGATGGTCCGTCATGTGCTTCGACCACAACCTCAAAAAGCTCTGGGAGGCTAATCTCCAGGACGATTTCCCCCACGCCGCCCACCATCGCGAGGTTGCCATTTCCATTACCAACTACACTCTCAAGCATGGGGATGCAGGTTTGGTCATCGTCGGAGGAAGGATGGAAATGCAACATCATTCAGCAGAGCTTTTCGATGAATTTATGGTGTCAGAACACAACAGGGAAGAGCACCGTAGAAGCGCCAGTGAGAAGCAGGCTTCTGAGACAGGCAACACAGACCTGCGTCATTTTGCCCTTTATGCTTTTGCTGGCCGCACTGGTGAATTAAGATGGAGCCGAAAGAATGAGAATATCCCATCGCAACCATCCGATGCTTCAGTGCTGATACCACAACACAATTACAAGCTTGATGCCCATGCCCTTAATAGTCGTCATCCTGGTCAGTTCGAATGTCGGGAATTTAGAGAATCAGTTCTTGGGGTCATGCCTCATCATTGGGATAGGAGAGAGGATACTTTTCTGCAACTTGCCCATTTTAGGAGGCATAAAAGGAAAGCACTGAAGAAAACACCTGGAAAAGCTGTTGTAAATAACGTGCACAAGCCCAGTGAACATAATCCACCTGGAAAGGATGTTTCCAATAGGTTAGCAAATGTGATTGGGAAAGCTGCAGATATGGCTAATTCAAATAAAATCAAGAAGGTATAATGCATGCAGACACAAACACATAGTTCTTACGCACTAGCATGTTGACTGTGTTGTTCTTTTTGTGTTTGGTGTTTTGGGGAGGGGGGAGGGGGGAGGGGGAGTTGCATGAACGCAGTAGTGGTAACGTGCATGGGCCAACGTAGGCACCAGGAGCAGGAGCACTCGTGATTGCACGGCGCACAGAGCTACTCAAGATGGAGAGGATGGTGGCGTGGGGAGGGGAGAGGATAGGATTTGAAATGAGGCAGATCAGTGGAGGCAGTGGTGCTGGCAGTTACTGGGCCAAGATGACATTGTAGGTGGTCGGGTAGAAGGAAAAAGAGAAGATGGCAGGGGCAGTCGAGGGTTCTTAAGAGTGGATTTGGTGTTCACCCAGTAGGAAATGGGTGAAGATTTGCCCAGTAGGGCCTCCCTTACTCTCATTTCAAAATGTATCCTCTCAATTTATCTGCAAGTGTGTTCGTCTTGAAGATACTGTATACTTTCCGATCCATTTACTGTACTCTCAAAATTAGTGTTAAATTGTATCCCTGGAACTATATTCTAAATAAGTAAGAACAGTCAA] consensusID : consensus_10750#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 774 fasta sequence [TCGTACTCTCAGGTCTACTTGGTCATGATGCAATATGGAGATGGCAACTGTCAACAGGTGCAACATGGTCCAACCTTCCGTCTCCATCAGGGATGATGGAAAACATTGTAGTTCCAACTTTGAAGGCTTTCGCTCTGCGAGCCTATGACCCAAAACAGGTAATCATCGCGGGTGGTGATCTGGAGGCTGTGGTGATTTCTCCTTCTGGTGGTTTATTGGCATCCATTGAACTCCCTGCACCTCCAACCCATGCGCTGGTACTTGAAGATTTCAATGGTGATGGTTTAACTGATATTATTCTGGTAACATCGGGGGGAGTCTATGGGTTTGTGCAGACAAGACATCCTGGGGCTCTTTTCTTCAGCACGCTTGTGGCTTGCTTGATAGTTGTTATCGGAGTGATATTTGTTTCACTGCACCTCAACTCCTCGAACAGCGGTAAACCTAGGGCTTCAACCGACTATAGGTGACGACATTATGTCAGTCGACAGAATTCCTTGTCAATATTGAGGTGTTGTTATAGCATTTGATTTAGATTTTTCATATAATCAACTGCCAACTGGGTTATGTAAACTNGTGCGGNCGAATGCATTTTTTGGCGTAACATGGTTGTATGATTTGGGGATGTATTTCCTGGCTTAGCTCATATTTAAAGAGGAATAGGCACTTGCCACCATGACATATCGTGCCTCTGGATCCCCTAGGACAATAACCAGTGGATTTTTCGGTGNNGNTTTTNGGATACCTNTGTTTTGGTGGGTTATATTATTAGNG] [+] EMBL CA766064 [TCGTACTCTCAGGTCTACTTGGTCATGATGCAATATGGAGATGGCAACTGTCAACAGGTGCAACATGGTCCAACCTTCCGTCTCCATCAGGGATGATGGAAAACATTGTAGTTCCAACTTTGAAGGCTTTCGCTCTGCGAGCCTATGACCCAAAACAGGTAATCATCGCGGGTGGTGATCTGGAGGCTGTGGTGATTTCTCCTTCTGGTGGTTTATTGGCATCCATTGAACTCCCTGCACCTCCAACCCATGCGCTGGTACTTGAAGATTTCAATGGTGATGGTTTAACTGATATTATTCTGGTAACATCGGGGGGAGTCTATGGGTTTGTGCAGACAAGACATCCTGGGGCTCTTTTCTTCAGCACGCTTGTGGCTTGCTTGATAGTTGTTATCGGAGTGATATTTGTTTCACTGCACCTCAACTCCTCGAACAGCGGTAAACCTAGGGCTTCAACCGACTATAGGTGACGACATTATGTCAGTCGACAGAATTCCTTGTCAATATTGAGGTGTTGTTATAGCATTTGATTTAGATTTTTCATATAATCAACTGCCAACTGGGTTATGTAAACTNGTGCGGNCGAATGCATTTTTTGGCGTAACATGGTTGTATGATTTGGGGATGTATTTCCTGGCTTAGCTCATATTTAAAGAGGAATAGGCACTTGCCACCATGACATATCGTGCCTCTGGATCCCCTAGGACAATAACCAGTGGATTTTTCGGTGNNGNTTTTNGGATACCTNTGTTTTGGTGGGTTATATTATTAGNG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10750#0 GGCCAGTCCAGTCCAGTCCAGTCCAGGACGGTCCAGTCCGGTCCCGTAGAGCGCCGGCGC 60 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 GTGTAGCTTCCTCCTCCGCTCCAGGCTCCAGCGAGGGAGGGAGGGAGACCACCGTCTCCG 120 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CCGGCTTTGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGCGGCGAGATGCGGAAGCGGGA 180 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 TCTGGGCATCCTCCTCCTCGCCGCCTTCGCCGTCTTCTTCTCGCTCCAGCACGACGGCGA 240 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CCTCTCCTTCCGCGAGGCCTGGTACCACCTCTCCGATGCCGACTACCCCATCAAGCACGA 300 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CGCCGACCGCCTCCCCTCTCCCCTAGTCGCCGACCTCAACGGCGACGGCAAACCCGAGGT 360 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CCTCATCCCCACCCACGACGCCAAGATCCAGGTCCTCCAGCCCCACCCCAGGCCCTCCCC 420 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CGACGATGCCTCCTTCCACGACGCCCGCCTCATGGCTGATGTCTCCCTCCTCCCCTCCAA 480 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CGTTCGCCTCTCCTCCGGGAGGCGCCCCGTCGCCATGGCCGTTGGCACCGTCGACCGCCA 540 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CTACGCCCACGCCCCCTCCCCCTCCAAGCAGCTCCTCGTCGTCGTCACCTCCGGATGGTC 600 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CGTCATGTGCTTCGACCACAACCTCAAAAAGCTCTGGGAGGCTAATCTCCAGGACGATTT 660 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CCCCCACGCCGCCCACCATCGCGAGGTTGCCATTTCCATTACCAACTACACTCTCAAGCA 720 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 TGGGGATGCAGGTTTGGTCATCGTCGGAGGAAGGATGGAAATGCAACATCATTCAGCAGA 780 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 GCTTTTCGATGAATTTATGGTGTCAGAACACAACAGGGAAGAGCACCGTAGAAGCGCCAG 840 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 TGAGAAGCAGGCTTCTGAGACAGGCAACACAGACCTGCGTCATTTTGCCCTTTATGCTTT 900 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 TGCTGGCCGCACTGGTGAATTAAGATGGAGCCGAAAGAATGAGAATATCCCATCGCAACC 960 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 ATCCGATGCTTCAGTGCTGATACCACAACACAATTACAAGCTTGATGCCCATGCCCTTAA 1020 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 TAGTCGTCATCCTGGTCAGTTCGAATGTCGGGAATTTAGAGAATCAGTTCTTGGGGTCAT 1080 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 GCCTCATCATTGGGATAGGAGAGAGGATACTTTTCTGCAACTTGCCCATTTTAGGAGGCA 1140 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 TAAAAGGAAAGCACTGAAGAAAACACCTGGAAAAGCTGTTGTAAATAACGTGCACAAGCC 1200 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CAGTGAACATAATCCACCTGGAAAGGATGTTTCCAATAGGTTAGCAAATGTGATTGGGAA 1260 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 AGCTGCAGATATGGCTAATTCAAATAAAATCAAGAAGTCACAAAGGACGCTTTATGTTCC 1320 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 GACAATCACCAACTATACTCAAGTTTGGTGGGTTCCTAATGTTGTTGTTGCCCACGAAAA 1380 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 AGAAGGGATAGAGGCTGTTCATCTAGCTTCTGGACGTACAATCTGCAAGCTTCATTTAAC 1440 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 AGAAGGAGGCCTTCATGCAGATATTAATGGAGATGGGGTTCTAGACCATGTTCAGGTTGT 1500 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 TGGTGCAAATGGCATCGAGCAAACAGTTGTTAGTGGTTCAATGGAAGTGCTGAAACCTTG 1560 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 TTGGGCAGTAGCTACATCTGGTGTGCCAGTGCGGGAGCAACTTTTTAATGTTTCTATCTG 1620 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ------------------------------------------------------------ consensus_10750#0 CCATTACAACAATTTCAATTTGTTTCATCATGGTGACTTTTCAAGAAGTTTTGGGAGGAC 1680 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ----------------------------CAGCAGCGATGGCAATGGAGAGGCTTATCTCT 32 consensus_10750#0 ATTTGATACAACTGGCTTAGAGGTGGCGACTCCTATTCTGCTCCAGAGAGATGATGGTCA 1740 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 TCGCCGCTCCTCCCGCGCCGGCCTCCCCGCGCCGCCTTCTCCCGCCCGCCGCCCTCCCTC 92 consensus_10750#0 TAAACACAGGAGAGGAAGCCACGGGGATATCATCTTTCTTACGAGTCGTGGGGAGGTGAC 1800 consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 GCCGCCGCGCCACCCCACCACCGCGCCGGCGGTGCGCCGTCTTCTTCTCGCTCCAGCACG 152 consensus_10750#0 CTCGTACTCTCCAGGTCTACTTGGTCATGATGCAATATGGAGATGGCAACTGTC--AACA 1858 consensus_10750#2 -TCGTACTCTC-AGGTCTACTTGGTCATGATGCAATATGGAGATGGCAACTGTC--AACA 56 consensus_10750#1 ACGGCGACCTCTCCTTCCGCGAGGCCTGGTACCACCTCTCCGATGCCGACTACCCCATCA 212 * *** ** * ** * * ** **** * *** * * ** consensus_10750#0 GGTGCAACATGGTCCAACCTTCC---------GTCTCCA---TCAGGGATGATGGAAAAC 1906 consensus_10750#2 GGTGCAACATGGTCCAACCTTCC---------GTCTCCA---TCAGGGATGATGGAAAAC 104 consensus_10750#1 AGCACGACGCCGACCGCCTCCCCTCTCCCCTAGTCGCCGACCTCAACGGCGACGGCAAAC 272 * * ** * ** * ** *** ** *** * ** ** **** consensus_10750#0 -----ATTGTAGTTCCAACTT------TGAAGGCTTTCTCTCTGCGAGCCTAT----GAC 1951 consensus_10750#2 -----ATTGTAGTTCCAACTT------TGAAGGCTTTCGCTCTGCGAGCCTAT----GAC 149 consensus_10750#1 CCGAGGTCCTCATCCCCACCCACGACGCCAAGATCCAGGTCCTCCAGCCCCACCCCAGGC 332 * * * ** ** *** ** * ** * * * consensus_10750#0 CCAAAACAGGTAAT-----CATCGCGGGTGGTGATCTGGAGGCTGTGGTGA---TTTCTC 2003 consensus_10750#2 CCAAAACAGGTAAT-----CATCGCGGGTGGTGATCTGGAGGCTGTGGTGA---TTTCTC 201 consensus_10750#1 CCTCCCCCGACGATGCCTCCTTCCACGACGCCCGCCTCATGGCTGATGTCTCCCTCCTCC 392 ** * * ** * ** * * ** ***** ** * * consensus_10750#0 CTTCTGGTGGTTTATTGGCATCCATTGAACTCCCTGCACCTCCAACCCATG-CGCTGGTA 2062 consensus_10750#2 CTTCTGGTGGTTTATTGGCATCCATTGAACTCCCTGCACCTCCAACCCATG-CGCTGGTA 260 consensus_10750#1 CCTCCAACGTTCGCCTCTCCTCCGGGAGGCGCCCCGTCGCCATGGCCGTTGGCACCGTCG 452 * ** * * * * *** * *** * * ** ** * * * consensus_10750#0 CTTG--AAGATTTCAATGGTGATGGTTTAACTGA------TATTATTCTGGTAACATCGG 2114 consensus_10750#2 CTTG--AAGATTTCAATGGTGATGGTTTAACTGA------TATTATTCTGGTAACATCGG 312 consensus_10750#1 ACCGCCACTACGCCCACGCCCCCTCCCCCTCCAAGCAGCTCCTCGTCGTCGTCACCTCCG 512 * * * * * * * * * * * ** ** ** * consensus_10750#0 GGGGAGTC--TATGGGTTT-GTGCAGA----CAAGACATCCTGGGGCTCTTTTCTTCAGC 2167 consensus_10750#2 GGGGAGTC--TATGGGTTT-GTGCAGA----CAAGACATCCTGGGGCTCTTTTCTTCAGC 365 consensus_10750#1 GATGGTCCGTCATGTGCTTCGACCACAACCTCAAAAAGCTCTGGGAGGCTAATCTCCAGG 572 * * * *** * ** * ** * *** * ***** ** *** *** consensus_10750#0 ACGCTTGTGGGTTGCTTGATAGTTGTTATCGGAGTGATATTTGTTTCACTGCACCTCAAC 2227 consensus_10750#2 ACGCTTGTGGCTTGCTTGATAGTTGTTATCGGAGTGATATTTGTTTCACTGCACCTCAAC 425 consensus_10750#1 ACGATTTCCCCCACGCCGCCCACCATCGCGAGGTTGCCATTTCCATTACCA-ACTACACT 631 *** ** * * * ** **** * ** ** ** consensus_10750#0 TCCTCGAACAGCGGTA-AACCTAGGGCTTCAACCGACTATAGGTGACGACATTATGTCAG 2286 consensus_10750#2 TCCTCGAACAGCGGTA-AACCTAGGGCTTCAACCGACTATAGGTGACGACATTATGTCAG 484 consensus_10750#1 CTCAAGCATGGGGATGCAGGTTTGGTCATCGTCGGAGGAAGGATGGAAATGCAACATCAT 691 * * * * * * * * ** * ** * ** * * ** * * *** consensus_10750#0 TCGACAGAATTCCTTGTCAATATTGAGGTGTTGTTATAGCATTTGATTTAGATTTTTCAT 2346 consensus_10750#2 TCGACAGAATTCCTTGTCAATATTGAGGTGTTGTTATAGCATTTGATTTAGATTTTTCAT 544 consensus_10750#1 TCAGCAGAGCTTTTCGATGAATTTATGGTGTCAGAACACAACAGGGAAGAGCACCGTAGA 751 ** **** * * * * ** ***** * * * * ** * consensus_10750#0 ATAATCAACTGCCAACTGGGTTATGTAAACTTGTGCGGC-GAA-TGCATTTTAGGG-GTA 2403 consensus_10750#2 ATAATCAACTGCCAACTGGGTTATGTAAACTNGTGCGGNCGAA-TGCATTTTTTGGCGTA 603 consensus_10750#1 AGCGCCAGTGAGAAGCAGGCTTCTG-AGACAGGCAACACAGACCTGCGTCATTTTGCCCT 810 * ** * * ** ** ** * ** * ** *** * * * consensus_10750#0 ACATG-TTGTATGATTTGGG-ATGTAAAAAAAATAAAAGA-------------------- 2441 consensus_10750#2 ACATGGTTGTATGATTTGGGGATGTATTTCCTGGCTTAGCTCATATTTAAAGAGGAATAG 663 consensus_10750#1 TTATGCTTTTGCTGGCCGCACTGGTGAATTAAGATGGAGCCGAAA---GAATGAGAATAT 867 *** ** * * ** ** consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 GCACTTGCCACCATGACATATCGTGCCTCTGGATCCCCTAGGACAATAACCAGTGGATTT 723 consensus_10750#1 CCCATCGCAACCATCCGATGCTTCAGTGCTG-ATACCACAACACAATTACAAGC----TT 922 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 TTCGGTGNNGNTTTTNGGATACCTNTGTTTTGGTGGGTTATATTATTAGNG--------- 774 consensus_10750#1 GATGCCCATGCCCTTAATA-GTCGTCATCCTGGTCAGTTCGAATGTCGGGAATTTAGAGA 981 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ATCAGTTCTTGGGGTCATGCCTCATCATTGGGATAGGAGAGAGGATACTTTTCTGCAACT 1041 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 TGCCCATTTTAGGAGGCATAAAAGGAAAGCACTGAAGAAAACACCTGGAAAAGCTGTTGT 1101 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 AAATAACGTGCACAAGCCCAGTGAACATAATCCACCTGGAAAGGATGTTTCCAATAGGTT 1161 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 AGCAAATGTGATTGGGAAAGCTGCAGATATGGCTAATTCAAATAAAATCAAGAAGGTATA 1221 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ATGCATGCAGACACAAACACATAGTTCTTACGCACTAGCATGTTGACTGTGTTGTTCTTT 1281 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 TTGTGTTTGGTGTTTTGGGGAGGGGGGAGGGGGGAGGGGGAGTTGCATGAACGCAGTAGT 1341 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 GGTAACGTGCATGGGCCAACGTAGGCACCAGGAGCAGGAGCACTCGTGATTGCACGGCGC 1401 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ACAGAGCTACTCAAGATGGAGAGGATGGTGGCGTGGGGAGGGGAGAGGATAGGATTTGAA 1461 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ATGAGGCAGATCAGTGGAGGCAGTGGTGCTGGCAGTTACTGGGCCAAGATGACATTGTAG 1521 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 GTGGTCGGGTAGAAGGAAAAAGAGAAGATGGCAGGGGCAGTCGAGGGTTCTTAAGAGTGG 1581 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 ATTTGGTGTTCACCCAGTAGGAAATGGGTGAAGATTTGCCCAGTAGGGCCTCCCTTACTC 1641 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 TCATTTCAAAATGTATCCTCTCAATTTATCTGCAAGTGTGTTCGTCTTGAAGATACTGTA 1701 consensus_10750#0 ------------------------------------------------------------ consensus_10750#2 ------------------------------------------------------------ consensus_10750#1 TACTTTCCGATCCATTTACTGTACTCTCAAAATTAGTGTTAAATTGTATCCCTGGAACTA 1761 consensus_10750#0 -------------------------- consensus_10750#2 -------------------------- consensus_10750#1 TATTCTAAATAAGTAAGAACAGTCAA 1787 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||