|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10766#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2619 fasta sequence
[GCTGACATATAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAATGAGCTTTTGTTGTGTATAGTAGCAGGAAGTGAACAAAAAGGGGG-GATTTTTTTTTATTTTCTGTCCATCACCTTCTTTCCTGGAGGAGTTCTCCAAGAAGCAGAGAAGCATTACCGCAATGGGGAAGCCGAGCTCGAGCTGGTTCAGAGCAGCTTCAGGCTCGGGCATGGCGTCGGTGGGCTTCACTGGAGTGGTGGCGATGCTGCTCATGGCCACAGCGTTCTTGGGGGTCACTGCCGACACTAGCTCAGACGACGTGACTGCCCTAAACACGTTCTACACAAGTCTGAACTCGCCCTCGCAGCTGACAAACTGGGTGGCGCAGAACGGCGACCCTTGTGGCCAGTCTTGGCTTGGGATCACTTGCTCTGGATCAAGGGTGATAACAATAAAATTACCCGGTATGGGGCTCAAGGGGACCTTGGGGTACAACATGAACGTCATGACTGCACTGGTTGAGCTTGATGCTAGCAATAACAATCTTGGAGGAGGTGATATCCCTTATAATCTCCCTCCAAATCTTGAGAGGCTAAATCTTGAGAACAATAGCTTCACTGGGACTTTGCCTTACTCCATTTCCCAAATGGCCTCACTGAAGTATCTAAATCTTGGACATAATCAGCTTTCAAGCATCAATGTTATGTTCAACCAACTCACCAACTTGGCTACATTGGACCTCTCTGACAACACCTTCTCTGGCACTCTGCCAGACAGCTTCAGCAACTTGACAAGTCTGACCATGCTTCATTTGCAGGATAATCGGTTTACCGGTACCATAGATGTCCTATCT-GATCTCCCTCTAACTGACCTCAACGTTCAAAACAATCAATTAAGTGGAGCAATTCCT-GATAAGCTAAAAGGCATAAGTAATCTGCAGATAAGTGGGAACTCCTTTAGCAACAGTCCAGTCAGTCCTGCACCATCATCTCCACCATCCACTACTTCACAATCCCCGCCACGACAGCCTTCTACCAGAAATCCTCGTAACCGTAACAGAAATCCACCAATTGGAAGCAATGGTGATAACGGTGGCAATGGCGATGGCAGTGGCGGTGACGGTGGAGGCAGAAGTTCTAAGATAGGAGGTGGGGCTGTTGCTGGGATTGTCATATCTTTGGTGGTTCTTGGAGCAATGGTTGGATTCTTTGTGTTCAAGAGAAAGTCAACGAGGCATCAACATGGAGGAGATCCTGAGAAGAATGAACCTCTCACTCTTAGACCAATTGCTTCAGGAAAATTCAATCAGCTGAGAACAATAAGCATCATATCACCAACTGCAAAGGAAGGATTGCAGAAGACTGTCTCAATGAACCTGAAACCGCCATCGAAAATCGATTTGCACAAGTCCTTTGACGAAAATGATCTCACAAACAAGCCTGTTTTGGCAAAGAATGTAGACCTTTCTTCCATCAGAGCAACTGCGTACACTGTGGCAGACCTGCAGATGGCAACGGAGAGCTTCAGTGCTGACAATCTTATCGGTGAAGGCTCTTTTGGCCGGGTTTACAGAGCAGAGATCTCAGATGAGTCAGATCATAAGGTACTGGCTGTGAAGAAAATCAATGTATCTGCCTTTCCAAGCAAACCATCCGATTTCTTTATTGATTTGGTAGCAAAGATTTCAAAATTAAACCATCCAAACCTCTCAGAGCTTGACGGCTACTGCTTGGAATAGCCGTGTCAAGATTGCATTAGGATCTGCAAGGGCATTAGAGTATATGCACGAAACTTGCTCACCGTCTATCATCCACAAGAATTTCAAGTCATCTAACATACTGTTGGATAATGAGCTTAACCCCCATGTTTCAGATTGTGGGTTTGCAGAGCTTATTCCCAACCAGGAACTCCAGGAATCAGATGAGAACTCAGGATATAGAGCTCCCGAGGTGACCATGTCTGGACAGTACTCTCAAAAGAGTGATGTGTACAGTTTTGGAGTCGTCATGCTAGAGCTCCTGACTGGCAGGAAAGCATTTGACAGATCCCAACCATGGCCACAGCAGTCGCTAGTCCGATGGGCTTCTCCGCAGCTTCATGACATCGATGCGTTAGATCAGATGGTAGATCCAGCACTGGAAGGACTGTACCCTGCAAAATCCCTCTCTCGATTCGCCGACGCAATCGCGCTCTGTGTCCAGCCTGAGCCGGAATTCAGGCCACCGATGTCGGAGGTCGTCCAGTCCTTAGTCCGGCTCGTGCAGAGGTCAAGCATGGGGTCAGTCCTCAGTGGTGGCGAGAGCATTTCGCGACGATACGACAACTCCGGTGACTACACATTCTAGGGTGAAAAAGAAAAAAAAATGCTTGCATGTTTTTGTCAGTAGTTTTTTGTGACAGCTACAGAAGTTACAGATGTTGCAGTTTGCTCAGCTACACAGTGATTTGTAGTACTGATAAGCCGTTGTCATGTAACCTGTAAAAGTATGCCTTTGGACTGCCAAACTCTGTTTTTGTTTGTGAATAACAATGGCAACCCCTGCCCTGGTGGTGATGCTTTATACATTCTGGTTTTCTTACATGAAAAGAGTGAAAGTGGAAAACAAATGATGCCTGATTCATTCAGGTAT]
[+] EMBL AK111635 [GCTGACATATAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAATGAGCTTTTGTTGTGTATAGTAGCAGGAAGTGAACAAAAAGGGGG GATTTTTTTTTATTTTCTGTCCATCACCTTCTTTCCTGGAGGAGTTCTCCAAGAAGCAGAGAAGCATTACCGCAATGGGGAAGCCGAGCTCGAGCTGGTTCAGAGCAGCTTCAGGCTCGGGCATGGCGTCGGTGGGCTTCACTGGAGTGGTGGCGATGCTGCTCATGGCCACAGCGTTCTTGGGGGTCACTGCCGACACTAGCTCAGACGACGTGACTGCCCTAAACACGTTCTACACAAGTCTGAACTCGCCCTCGCAGCTGACAAACTGGGTGGCGCAGAACGGCGACCCTTGTGGCCAGTCTTGGCTTGGGATCACTTGCTCTGGATCAAGGGTGATAACAATAAAATTACCCGGTATGGGGCTCAAGGGGACCTTGGGGTACAACATGAACGTCATGACTGCACTGGTTGAGCTTGATGCTAGCAATAACAATCTTGGAGGAGGTGATATCCCTTATAATCTCCCTCCAAATCTTGAGAGGCTAAATCTTGAGAACAATAGCTTCACTGGGACTTTGCCTTACTCCATTTCCCAAATGGCCTCACTGAAGTATCTAAATCTTGGACATAATCAGCTTTCAAGCATCAATGTTATGTTCAACCAACTCACCAACTTGGCTACATTGGACCTCTCTGACAACACCTTCTCTGGCACTCTGCCAGACAGCTTCAGCAACTTGACAAGTCTGACCATGCTTCATTTGCAGGATAATCGGTTTACCGGTACCATAGATGTCCTATCT GATCTCCCTCTAACTGACCTCAACGTTCAAAACAATCAATTAAGTGGAGCAATTCCT GATAAGCTAAAAGGCATAAGTAATCTGCAGATAAGTGGGAACTCCTTTAGCAACAGTCCAGTCAGTCCTGCACCATCATCTCCACCATCCACTACTTCACAATCCCCGCCACGACAGCCTTCTACCAGAAATCCTCGTAACCGTAACAGAAATCCACCAATTGGAAGCAATGGTGATAACGGTGGCAATGGCGATGGCAGTGGCGGTGACGGTGGAGGCAGAAGTTCTAAGATAGGAGGTGGGGCTGTTGCTGGGATTGTCATATCTTTGGTGGTTCTTGGAGCAATGGTTGGATTCTTTGTGTTCAAGAGAAAGTCAACGAGGCATCAACATGGAGGAGATCCTGAGAAGAATGAACCTCTCACTCTTAGACCAATTGCTTCAGGAAAATTCAATCAGCTGAGAACAATAAGCATCATATCACCAACTGCAAAGGAAGGATTGCAGAAGACTGTCTCAATGAACCTGAAACCGCCATCGAAAATCGATTTGCACAAGTCCTTTGACGAAAATGATCTCACAAACAAGCCTGTTTTGGCAAAGAATGTAGACCTTTCTTCCATCAGAGCAACTGCGTACACTGTGGCAGACCTGCAGATGGCAACGGAGAGCTTCAGTGCTGACAATCTTATCGGTGAAGGCTCTTTTGGCCGGGTTTACAGAGCAGAGATCTCAGATGAGTCAGATCATAAGGTACTGGCTGTGAAGAAAATCAATGTATCTGCCTTTCCAAGCAAACCATCCGATTTCTTTATTGATTTGGTAGCAAAGATTTCAAAATTAAACCATCCAAACCTCTCAGAGCTTGACGGCTACTGCTTGGAATAGCCGTGTCAAGATTGCATTAGGATCTGCAAGGGCATTAGAGTATATGCACGAAACTTGCTCACCGTCTATCATCCACAAGAATTTCAAGTCATCTAACATACTGTTGGATAATGAGCTTAACCCCCATGTTTCAGATTGTGGGTTTGCAGAGCTTATTCCCAACCAGGAACTCCAGGAATCAGATGAGAACTCAGGATATAGAGCTCCCGAGGTGACCATGTCTGGACAGTACTCTCAAAAGAGTGATGTGTACAGTTTTGGAGTCGTCATGCTAGAGCTCCTGACTGGCAGGAAAGCATTTGACAGATCCCAACCATGGCCACAGCAGTCGCTAGTCCGATGGGCTTCTCCGCAGCTTCATGACATCGATGCGTTAGATCAGATGGTAGATCCAGCACTGGAAGGACTGTACCCTGCAAAATCCCTCTCTCGATTCGCCGACGCAATCGCGCTCTGTGTCCAGCCTGAGCCGGAATTCAGGCCACCGATGTCGGAGGTCGTCCAGTCCTTAGTCCGGCTCGTGCAGAGGTCAAGCATGGGGTCAGTCCTCAGTGGTGGCGAGAGCATTTCGCGACGATACGACAACTCCGGTGACTACACATTCTAGGGTGAAAAAGAAAAAAAAATGCTTGCATGTTTTTGTCAGTAGTTTTTTGTGACAGCTACAGAAGTTACAGATGTTGCAGTTTGCTCAGCTACACAGTGATTTGTAGTACTGATAAGCCGTTGTCATGTAACCTGTAAAAGTATGCCTTTGGACTGCCAAACTCTGTTTTTGTTTGTGAATAACAATGGCAACCCCTGCCCTGGTGGTGATGCTTTATACATTCTGGTTTTCTTACATGAAAAGAGTGAAAGTGGAAAACAAATGATGCCTGATTCATTCAGGTAT]
[+] EMBL CB640815 [ AGAGAGGAGAATGAGCTTTTGTTGTGT TAGTAGCA GAA TGAACAAAAAGGGGGATTTTTTTTTTTATTTTCTGTCCATCACCTTCTTTCCTGGAGGAGTTCTCCAAGAAGCAGAGAAGCATTACCGCAATGGGGAAGCCGAGCTCGAGCTGGTTCAGAGCAGCTTCAGGCTCGGGCATGGCGTCGGTGGGCTTCACTGGAGTGGTGGCGATGCTGCTCATGGCCACAGCGTTCTTGGGGGTCACTGCCGACACTAGCTCAGACGACGTGACTGCCCTAAACACGTTCTACACAAGTCTGAACTCGCCCTCGCAGCTGACAAACTGGGTGGCGCAGAACGGCGACCCTTGTGGCCAGTCTTGGCTTGGGATCACTTGCTCTGGATCAAGGGTGATAACAATAAAATTACCCGGTATGGGGCTCAAGGGGACCTTGGGGTACAACATGAACGTCATGACTGCACTGGTTGAGCTTGATGCTAGCAATAACAATCTTGGAGGAGGTGATATCCCTTATAATCTCCCTCCAAATCTTGAGAGGCTAAATCTTGAGAACAATAGCT ]
[+] EMBL CF303788 [ GTGATAACAATAAAATTACCCGGTATGGGGCTCAAGGGGACCTTGGGGTACAACATGAACGTCATGACTGCACTGGTTGAGCTTGATGCTAGCAATAACAATCTTGGAGGAGGTGATATCCCTTATAATCTCCCTCCAAATCTTGAGAGGCTAAATCTTGAGAACAATAGCTTCACTGGGACTTTGCCTTACTCCATTTCCCAAATGGCCTCACTGAAGTATCTAAATCTTGGACATAATCAGCTTTCAAGCATCAATGTTATGTTCAACCAACTCACCAACTTGGCTACATTGGACCTCTCTGACAACACCTTCTCTGGCACTCTGCCAGACAGCTTCAGCAACTTGACAAGTCTGACCATGCTTCATTTGCAGGATAATCGGTTTACCGGTACCATAGATGTCCTATCT GATCTCCCTCTAACTGACCTCAACGTTCAAAACAATCAATTAAGTGGAGCAATTCCT GATAAGCTAAAAGGCATAAGTAATCTGCAGATAAGTGGGAACTCCTTTAGCAACAGTCCAGTCAGTCCTGCACCATCATCTCCACCATCCACTACTTCACAATCCCCGCCACGA ]
[+] EMBL C22510 [ TCAAGGGGACCTTGGGGTACAACATGAACGTCATGACTGCACTGGTTGAGCTTGATGCTAGCAATAACAATCTTGGAGGAGGTGATATCCCTTATAATCTCCCTCCAAATCTTGAGAGGCTAAATCTTGAGAACAATAGCTTCACTGGGACTTTGCCTTACTCCATTTCCCAAATGGCCTCACTGAAGTATCTAAATCTTGGACATAATCAGCTTTCAAGCATCAATGTTATGTTCAACCAACTCACCAACTTGGCTACATTGGACCTCTCTGACAACACCTTCTCTGGCACTCTGCCAGACAGCTTCAGCAACTTGACAAGTCTGACCATGCTTCATTTGCAGGATAATCGGTTTACCGGTACCATAGATGTCCTATCTGGATCTCCCTCTAACTGACCTCAACGTTCAAAACAATCAATTAAGTGGAGCAATTCCTGGATA ]
consensusID : consensus_10766#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1739 fasta sequence
[AAGCTAAAAGGCATAAGTAATCTGCAGATAAGTGGGAACTCCTTTAGCAACAGTCCAGTCAGTCCTGCACCATCATCTCCACCATCCACTACTTCACAATCCCCGCCACGACAGCCTTCTACCAGAAATCCTCGTAACCGTAACAGAAATCCACCAATTGGAAGCAATGGTGATAACGGTGGCAATGGCGATGGCAGTGGCGGTGACGGTGGAGGCAGAAGTTCTAAGATAGGAGGTGGGGCTGTTGCTGGGATTGTCATATCTTTGGTGGTTCTTGGAGCAATGGTTGGATTCTTTGTGTTCAAGAGAAAGTCAACGAGGCATCAACATGGAGGAGATCCTGAGAAGAATGAACCTCTCACTCTTAGACCAATTGCTTCAGGAAAATTCAATCAGCTGAGAACAATAAGCATCATATCACCAACTGCAAAGGAAGGATTGCAGAAGACTGTCTCAATGAACCTGAAACCGCCATCGAAAATCGATTTGCACAAGTCCTTTGACGAAAATGATCTCACAAACAAGCCTGTTTTGGCAAAGAATGTAGACCTTTCTTCCATCAGAGCAACTGCGTACACTGTGGCAGACCTGCAGATGGCAACGGAGAGCTTCAGTGCTGACAATCTTATCGGTGAAGGCTCTTTTGGCCGGGTTTACAGAGCAGAGATCTCAGATGAGTCAGATCATAAGGTACTGGCTGTGAAGAAAATCAATGTATCTGCCTTTCCAAGCAAACCATCCGATTTCTTTATTGATTTGGTAGCAAAGATTTCAAAATTAAACCATCCAAACCTCTCAGAGCTTGACGGCTACTGCTTGGAGCATGGACAGTATTTGCTGGCATATGAATTTTACAGAAACGGTTCTCTTCATGACTTCCTTCACCTGTCTGATGGATACAGCAAACCACTGTCTTGGAATAGCCGTGTCAAGATTGCATTAGGATCTGCAAGGGCATTAGAGTATATGCACGAAACTTGCTCACCGTCTATCATCCACAAG-AATTTCAAGTCATCTAACATACTGTTGGATAATGAGCTTAACCCCCATGTTTCAGATTGTGGGTTTGCAGAGCTTATTCCCAACCAGGAACTCCAGGAATCAGATGAGAACTCAGGATATAGAGCTCCCGAGGTGACCATGTCTGGACAGTACTCTCAAAAGAGTGATGTGTACAGTTTTGGAGTCGTCATGCTAGAGCTCCTGACTGGCAGGAAAGCATTTGACAGATCCCAACCATGGCCACAGCAGTCGCTAGTCCGATGGGCTTCTCCGCAGCTTCATGACATCGATGCGTTAGATCAGATGGTAGATCCAGCACTGGAAGGACTGTACCCTGCAAAATCCCTCTCTCGATTCGCCGACGCAATCGCGCTCTGTGTCCAGCCTGAGCCGGAATTCAGGCCACCGATGTCGGAGGTCGTCCAGTCCTTAGT-CCGGCTCGTGCAGAGGTCAAGCATGGGGTCAGTCCTCAGTGGTGGCGAGAGCATTTCGCGACGATACGACAACTCCGGTGACTACACATTCTAGGGTGAAAAAGAAAAAAAAATGCTTGCATGTTTTTGTCAGTAGTTTTTTGTGACAGCTACAGAAGTTACAGATGTTGCAGTTTGCTCAGCTACACAGTGATTTGTAGTACTGATAAGCCGTTGTCATGTAACCTGTAAAAGTATGCCTTTGGACTGCCAAACTCTGTTTTTGTTTGTGAATAACAATGGCAACCCCTGCCCTGGTGGTGA]
[+] EMBL AK111995 [AAGCTAAAAGGCATAAGTAATCTGCAGATAAGTGGGAACTCCTTTAGCAACAGTCCAGTCAGTCCTGCACCATCATCTCCACCATCCACTACTTCACAATCCCCGCCACGACAGCCTTCTACCAGAAATCCTCGTAACCGTAACAGAAATCCACCAATTGGAAGCAATGGTGATAACGGTGGCAATGGCGATGGCAGTGGCGGTGACGGTGGAGGCAGAAGTTCTAAGATAGGAGGTGGGGCTGTTGCTGGGATTGTCATATCTTTGGTGGTTCTTGGAGCAATGGTTGGATTCTTTGTGTTCAAGAGAAAGTCAACGAGGCATCAACATGGAGGAGATCCTGAGAAGAATGAACCTCTCACTCTTAGACCAATTGCTTCAGGAAAATTCAATCAGCTGAGAACAATAAGCATCATATCACCAACTGCAAAGGAAGGATTGCAGAAGACTGTCTCAATGAACCTGAAACCGCCATCGAAAATCGATTTGCACAAGTCCTTTGACGAAAATGATCTCACAAACAAGCCTGTTTTGGCAAAGAATGTAGACCTTTCTTCCATCAGAGCAACTGCGTACACTGTGGCAGACCTGCAGATGGCAACGGAGAGCTTCAGTGCTGACAATCTTATCGGTGAAGGCTCTTTTGGCCGGGTTTACAGAGCAGAGATCTCAGATGAGTCAGATCATAAGGTACTGGCTGTGAAGAAAATCAATGTATCTGCCTTTCCAAGCAAACCATCCGATTTCTTTATTGATTTGGTAGCAAAGATTTCAAAATTAAACCATCCAAACCTCTCAGAGCTTGACGGCTACTGCTTGGAGCATGGACAGTATTTGCTGGCATATGAATTTTACAGAAACGGTTCTCTTCATGACTTCCTTCACCTGTCTGATGGATACAGCAAACCACTGTCTTGGAATAGCCGTGTCAAGATTGCATTAGGATCTGCAAGGGCATTAGAGTATATGCACGAAACTTGCTCACCGTCTATCATCCACAAG AATTTCAAGTCATCTAACATACTGTTGGATAATGAGCTTAACCCCCATGTTTCAGATTGTGGGTTTGCAGAGCTTATTCCCAACCAGGAACTCCAGGAATCAGATGAGAACTCAGGATATAGAGCTCCCGAGGTGACCATGTCTGGACAGTACTCTCAAAAGAGTGATGTGTACAGTTTTGGAGTCGTCATGCTAGAGCTCCTGACTGGCAGGAAAGCATTTGACAGATCCCAACCATGGCCACAGCAGTCGCTAGTCCGATGGGCTTCTCCGCAGCTTCATGACATCGATGCGTTAGATCAGATGGTAGATCCAGCACTGGAAGGACTGTACCCTGCAAAATCCCTCTCTCGATTCGCCGACGCAATCGCGCTCTGTGTCCAGCCTGAGCCGGAATTCAGGCCACCGATGTCGGAGGTCGTCCAGTCCTTAGT CCGGCTCGTGCAGAGGTCAAGCATGGGGTCAGTCCTCAGTGGTGGCGAGAGCATTTCGCGACGATACGACAACTCCGGTGACTACACATTCTAGGGTGAAAAAGAAAAAAAAATGCTTGCATGTTTTTGTCAGTAGTTTTTTGTGACAGCTACAGAAGTTACAGATGTTGCAGTTTGCTCAGCTACACAGTGATTTGTAGTACTGATAAGCCGTTGTCATGTAACCTGTAAAAGTATGCCTTTGGACTGCCAAACTCTGTTTTTGTTTGTGAATAACAATGGCAACCCCTGCCCTGGTGGTGA]
[+] EMBL CA754463 [ AAGTCTGTCTCAATGAACCTGAAACCGCCATCGAAAATCGATTTGCACAAGTCCTTTGACGAAAATGATCTCACAAACAAGCCTGTTTTGGCAAAGAATGTAGACCTTTCTTCCATCAGAGCAACTGCGTACACTGTGGCAGACCTGCAGATGGCAACGGAGAGCTTCAGTGCTGACAATCTTATCGGTGAAGGCTCTTTTGGCCGGGTTTACAGAGCAGAGATCTCAGATGAGTCAGATCATAAGGTACTGGCTGTGAAGAAAATCAATGTATCTGCCTTTCCAAGCAAACCATCCGATTTCTTTATTGATTTGGTAGCAAAGATTTCAAAATTAAACCATCCAAACCTCTCAGAGCTTGACGGCTACTGCTTGGAGCATGGACAGTATTTGCTGGCATATGAATTTTACAGAAACGGTTCTCTTCATGACTTCCTTCACCTGTCTGATGGATACAGCAAACCACTGTCTTGGAATAGCCGTGTCAAGATTGCATTAGGATCTGCAAGGGCATTAGAGTATATGCACGAAACTTGCTCACCGTCTATCATCCACAAGAAATTTC AGTCATCTAACATACTGTTGGATAATGAGCTTAACCCCC ]
[+] EMBL C22511 [ GCTTCTCCGCAGCTTCATGNCATCGATGCGTTAGATCAGATGGTAGATCCAGCACTNGANGGACTGTACCCTGNAAAATCCCTCTCTCGATTCGCCGACGCAATCGCGCTCTGTGTCCAGCCTGAGCCGGAATTCAGGCCACCGATGTCGGAGGTCGTCCAGTCCTTAGT CCGGCTCGTGCAGAGGTCAAGCATGGGGTCAGTCCTCAGTGGTGGCGAGAGCATTTCGCGACGATACGACAACTCCGGTGACTACACATTCTAG ]
[+] EMBL CF309622 [ CCCTCTCTCGATTCGCCGACGCAATCGCGCTCTGTGTCCAGCCTGAGCCGGAATTCAGGCCACCGATGTCGGAGGTCGTCCAGTCCTTATTNCTGGCTCGTGCAGAGGTCAAGCATGGGGTCAGTCCTCAGTGGCGGCGAGAGCATTTCGCGACGATACGACAACTCCGGTGACTACACATTCTAGGGTGAAAAAGAAAAAAAAATGCTTGCATGTTTCTGTCAGTAGTTTTTTGTGACAGCTACAGAAGTTACAGATGTTGCAGTTTGCTCAGCTACACAGTGATTTGTAGTACTGATAAGCCGTTGTCATGTAACCTGTAAAAGTATGCCTTTGGACTGCCAAACTCTGCTTTTGTTTGTGAATAACAATGGCAACCCCTGCCCTGGTGGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10766#0 GCTGACATATAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAATGAGCTTTT 60
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 GTTGTGTATAGTAGCAGGAAGTGAACAAAAAGGGGGGATTTTTTTTTATTTTCTGTCCAT 120
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 CACCTTCTTTCCTGGAGGAGTTCTCCAAGAAGCAGAGAAGCATTACCGCAATGGGGAAGC 180
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 CGAGCTCGAGCTGGTTCAGAGCAGCTTCAGGCTCGGGCATGGCGTCGGTGGGCTTCACTG 240
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 GAGTGGTGGCGATGCTGCTCATGGCCACAGCGTTCTTGGGGGTCACTGCCGACACTAGCT 300
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 CAGACGACGTGACTGCCCTAAACACGTTCTACACAAGTCTGAACTCGCCCTCGCAGCTGA 360
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 CAAACTGGGTGGCGCAGAACGGCGACCCTTGTGGCCAGTCTTGGCTTGGGATCACTTGCT 420
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 CTGGATCAAGGGTGATAACAATAAAATTACCCGGTATGGGGCTCAAGGGGACCTTGGGGT 480
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 ACAACATGAACGTCATGACTGCACTGGTTGAGCTTGATGCTAGCAATAACAATCTTGGAG 540
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 GAGGTGATATCCCTTATAATCTCCCTCCAAATCTTGAGAGGCTAAATCTTGAGAACAATA 600
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 GCTTCACTGGGACTTTGCCTTACTCCATTTCCCAAATGGCCTCACTGAAGTATCTAAATC 660
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 TTGGACATAATCAGCTTTCAAGCATCAATGTTATGTTCAACCAACTCACCAACTTGGCTA 720
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 CATTGGACCTCTCTGACAACACCTTCTCTGGCACTCTGCCAGACAGCTTCAGCAACTTGA 780
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 CAAGTCTGACCATGCTTCATTTGCAGGATAATCGGTTTACCGGTACCATAGATGTCCTAT 840
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 CTGATCTCCCTCTAACTGACCTCAACGTTCAAAACAATCAATTAAGTGGAGCAATTCCTG 900
consensus_10766#1 ------------------------------------------------------------
consensus_10766#0 ATAAGCTAAAAGGCATAAGTAATCTGCAGATAAGTGGGAACTCCTTTAGCAACAGTCCAG 960
consensus_10766#1 --AAGCTAAAAGGCATAAGTAATCTGCAGATAAGTGGGAACTCCTTTAGCAACAGTCCAG 58
**********************************************************
consensus_10766#0 TCAGTCCTGCACCATCATCTCCACCATCCACTACTTCACAATCCCCGCCACGACAGCCTT 1020
consensus_10766#1 TCAGTCCTGCACCATCATCTCCACCATCCACTACTTCACAATCCCCGCCACGACAGCCTT 118
************************************************************
consensus_10766#0 CTACCAGAAATCCTCGTAACCGTAACAGAAATCCACCAATTGGAAGCAATGGTGATAACG 1080
consensus_10766#1 CTACCAGAAATCCTCGTAACCGTAACAGAAATCCACCAATTGGAAGCAATGGTGATAACG 178
************************************************************
consensus_10766#0 GTGGCAATGGCGATGGCAGTGGCGGTGACGGTGGAGGCAGAAGTTCTAAGATAGGAGGTG 1140
consensus_10766#1 GTGGCAATGGCGATGGCAGTGGCGGTGACGGTGGAGGCAGAAGTTCTAAGATAGGAGGTG 238
************************************************************
consensus_10766#0 GGGCTGTTGCTGGGATTGTCATATCTTTGGTGGTTCTTGGAGCAATGGTTGGATTCTTTG 1200
consensus_10766#1 GGGCTGTTGCTGGGATTGTCATATCTTTGGTGGTTCTTGGAGCAATGGTTGGATTCTTTG 298
************************************************************
consensus_10766#0 TGTTCAAGAGAAAGTCAACGAGGCATCAACATGGAGGAGATCCTGAGAAGAATGAACCTC 1260
consensus_10766#1 TGTTCAAGAGAAAGTCAACGAGGCATCAACATGGAGGAGATCCTGAGAAGAATGAACCTC 358
************************************************************
consensus_10766#0 TCACTCTTAGACCAATTGCTTCAGGAAAATTCAATCAGCTGAGAACAATAAGCATCATAT 1320
consensus_10766#1 TCACTCTTAGACCAATTGCTTCAGGAAAATTCAATCAGCTGAGAACAATAAGCATCATAT 418
************************************************************
consensus_10766#0 CACCAACTGCAAAGGAAGGATTGCAGAAGACTGTCTCAATGAACCTGAAACCGCCATCGA 1380
consensus_10766#1 CACCAACTGCAAAGGAAGGATTGCAGAAGACTGTCTCAATGAACCTGAAACCGCCATCGA 478
************************************************************
consensus_10766#0 AAATCGATTTGCACAAGTCCTTTGACGAAAATGATCTCACAAACAAGCCTGTTTTGGCAA 1440
consensus_10766#1 AAATCGATTTGCACAAGTCCTTTGACGAAAATGATCTCACAAACAAGCCTGTTTTGGCAA 538
************************************************************
consensus_10766#0 AGAATGTAGACCTTTCTTCCATCAGAGCAACTGCGTACACTGTGGCAGACCTGCAGATGG 1500
consensus_10766#1 AGAATGTAGACCTTTCTTCCATCAGAGCAACTGCGTACACTGTGGCAGACCTGCAGATGG 598
************************************************************
consensus_10766#0 CAACGGAGAGCTTCAGTGCTGACAATCTTATCGGTGAAGGCTCTTTTGGCCGGGTTTACA 1560
consensus_10766#1 CAACGGAGAGCTTCAGTGCTGACAATCTTATCGGTGAAGGCTCTTTTGGCCGGGTTTACA 658
************************************************************
consensus_10766#0 GAGCAGAGATCTCAGATGAGTCAGATCATAAGGTACTGGCTGTGAAGAAAATCAATGTAT 1620
consensus_10766#1 GAGCAGAGATCTCAGATGAGTCAGATCATAAGGTACTGGCTGTGAAGAAAATCAATGTAT 718
************************************************************
consensus_10766#0 CTGCCTTTCCAAGCAAACCATCCGATTTCTTTATTGATTTGGTAGCAAAGATTTCAAAAT 1680
consensus_10766#1 CTGCCTTTCCAAGCAAACCATCCGATTTCTTTATTGATTTGGTAGCAAAGATTTCAAAAT 778
************************************************************
consensus_10766#0 TAAACCATCCAAACCTCTCAGAGCTTGACGGCTACTGCTTGGA----------------- 1723
consensus_10766#1 TAAACCATCCAAACCTCTCAGAGCTTGACGGCTACTGCTTGGAGCATGGACAGTATTTGC 838
*******************************************
consensus_10766#0 ------------------------------------------------------------
consensus_10766#1 TGGCATATGAATTTTACAGAAACGGTTCTCTTCATGACTTCCTTCACCTGTCTGATGGAT 898
consensus_10766#0 ---------------------ATAGCCGTGTCAAGATTGCATTAGGATCTGCAAGGGCAT 1762
consensus_10766#1 ACAGCAAACCACTGTCTTGGAATAGCCGTGTCAAGATTGCATTAGGATCTGCAAGGGCAT 958
***************************************
consensus_10766#0 TAGAGTATATGCACGAAACTTGCTCACCGTCTATCATCCACAAGAATTTCAAGTCATCTA 1822
consensus_10766#1 TAGAGTATATGCACGAAACTTGCTCACCGTCTATCATCCACAAGAATTTCAAGTCATCTA 1018
************************************************************
consensus_10766#0 ACATACTGTTGGATAATGAGCTTAACCCCCATGTTTCAGATTGTGGGTTTGCAGAGCTTA 1882
consensus_10766#1 ACATACTGTTGGATAATGAGCTTAACCCCCATGTTTCAGATTGTGGGTTTGCAGAGCTTA 1078
************************************************************
consensus_10766#0 TTCCCAACCAGGAACTCCAGGAATCAGATGAGAACTCAGGATATAGAGCTCCCGAGGTGA 1942
consensus_10766#1 TTCCCAACCAGGAACTCCAGGAATCAGATGAGAACTCAGGATATAGAGCTCCCGAGGTGA 1138
************************************************************
consensus_10766#0 CCATGTCTGGACAGTACTCTCAAAAGAGTGATGTGTACAGTTTTGGAGTCGTCATGCTAG 2002
consensus_10766#1 CCATGTCTGGACAGTACTCTCAAAAGAGTGATGTGTACAGTTTTGGAGTCGTCATGCTAG 1198
************************************************************
consensus_10766#0 AGCTCCTGACTGGCAGGAAAGCATTTGACAGATCCCAACCATGGCCACAGCAGTCGCTAG 2062
consensus_10766#1 AGCTCCTGACTGGCAGGAAAGCATTTGACAGATCCCAACCATGGCCACAGCAGTCGCTAG 1258
************************************************************
consensus_10766#0 TCCGATGGGCTTCTCCGCAGCTTCATGACATCGATGCGTTAGATCAGATGGTAGATCCAG 2122
consensus_10766#1 TCCGATGGGCTTCTCCGCAGCTTCATGACATCGATGCGTTAGATCAGATGGTAGATCCAG 1318
************************************************************
consensus_10766#0 CACTGGAAGGACTGTACCCTGCAAAATCCCTCTCTCGATTCGCCGACGCAATCGCGCTCT 2182
consensus_10766#1 CACTGGAAGGACTGTACCCTGCAAAATCCCTCTCTCGATTCGCCGACGCAATCGCGCTCT 1378
************************************************************
consensus_10766#0 GTGTCCAGCCTGAGCCGGAATTCAGGCCACCGATGTCGGAGGTCGTCCAGTCCTTAGTCC 2242
consensus_10766#1 GTGTCCAGCCTGAGCCGGAATTCAGGCCACCGATGTCGGAGGTCGTCCAGTCCTTAGTCC 1438
************************************************************
consensus_10766#0 GGCTCGTGCAGAGGTCAAGCATGGGGTCAGTCCTCAGTGGTGGCGAGAGCATTTCGCGAC 2302
consensus_10766#1 GGCTCGTGCAGAGGTCAAGCATGGGGTCAGTCCTCAGTGGTGGCGAGAGCATTTCGCGAC 1498
************************************************************
consensus_10766#0 GATACGACAACTCCGGTGACTACACATTCTAGGGTGAAAAAGAAAAAAAAATGCTTGCAT 2362
consensus_10766#1 GATACGACAACTCCGGTGACTACACATTCTAGGGTGAAAAAGAAAAAAAAATGCTTGCAT 1558
************************************************************
consensus_10766#0 GTTTTTGTCAGTAGTTTTTTGTGACAGCTACAGAAGTTACAGATGTTGCAGTTTGCTCAG 2422
consensus_10766#1 GTTTTTGTCAGTAGTTTTTTGTGACAGCTACAGAAGTTACAGATGTTGCAGTTTGCTCAG 1618
************************************************************
consensus_10766#0 CTACACAGTGATTTGTAGTACTGATAAGCCGTTGTCATGTAACCTGTAAAAGTATGCCTT 2482
consensus_10766#1 CTACACAGTGATTTGTAGTACTGATAAGCCGTTGTCATGTAACCTGTAAAAGTATGCCTT 1678
************************************************************
consensus_10766#0 TGGACTGCCAAACTCTGTTTTTGTTTGTGAATAACAATGGCAACCCCTGCCCTGGTGGTG 2542
consensus_10766#1 TGGACTGCCAAACTCTGTTTTTGTTTGTGAATAACAATGGCAACCCCTGCCCTGGTGGTG 1738
************************************************************
consensus_10766#0 ATGCTTTATACATTCTGGTTTTCTTACATGAAAAGAGTGAAAGTGGAAAACAAATGATGC 2602
consensus_10766#1 A----------------------------------------------------------- 1739
*
consensus_10766#0 CTGATTCATTCAGGTAT 2619
consensus_10766#1 -----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||