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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10772#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2838 fasta sequence
[GTTTATTAAGATGAGTTAACTAGGCAGATCTCTTGCTGTTTCATGTGGCTTCTACCACACAGCTAACATGAGTTACACCCTGCAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAATTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATATACTTTTTTTTTTCTTCTGCAACATGTATGCGCGATCAGGTTGTTGGTCTGGTCTGTCATCGTGATAAGTGGACCTGAAGATTGGTGGCAGTTCAGGTCGTGGATGGTTTGTTGCTTTCTTCCTTACAAGTACTAATTACATTTGGAGATCTATGCAGATTTCATGCGCAAGCTGGAACGCTATGCCTGGGCGCACCTTACTGCAGGAATTGCTGTGACTGAACTTTTGATGATGTCCCGTGGCTCTGCTGCATCCGCCC-TT-AAACTTGGTTCTCTTGTAGGCTTAACTGTTTTTGCAGGTTGTCGTTCTCTTCTCTGAAATTGTTGGTCTCGACAGTTTCAAACTTCAGTACCCGCCCTGTCCGGTGTTCGTCATTCACGGATAAGTTGGAAGGCACGGGTAAGATATATTGGCACGGTCCATGGAAACGTTGAACAGTGCACAAGGCTACTGCTGTTTGAGCTCCTCCCATTCCGCCAGGATCTCCTGAAATGTGTTTCAGGGGGAAAATGAACCGGACAGAGTGGCACCATGCAGTCATTTAGCACCTGCCAGTGCGATGACTTCACTACCAGAAGTGCCCAAGTAGCTAATCTTAAGGTAATCTGTTTCTGGTGCTCGGATAAACGGACACACCAGACCATAAGCCAGGTAAATACCATCGAATCACATCGTTAACGGCGGCGGCTACAGAACCATACGCGCAGTTTGGTGAGTTTGGTGTGGTTGATGACGTGGCTGGTCCGATGATTGGTCCAAAATGCCAGCATATACCGTCAATGATGATATACCGCCAAAATCAGGCAGGAAACGAGCGATCGATTCTTTGCCCGCTTCATTACTCTCTTCCCAAGGTACGCATCCGTCAATGATGATATACCGCCAAGTCTACAAAACTGAGGGCAATTGTTTCATCGTCGCGGTTATTAACCTTAGCTAT-GGCGAATTACGGATTAGTGGGATTCGATAAAATCATAAGCAATGAATTTTCAGACGATAATAGAGCGGCTACGGTGATTTGCTAATGTCAAATTTGAGTCTTAATTAGCTCTTTTAGAACACCCAAAGTTTTTTCCACAAAAATCCTTCAACATTTATCTGGTACCGTTCCAGGAGGAGCCTTTTGGTTAGAGTGGCTTCATCGACCTTAGCTCACGCTAGGGTTTAGCTGACGACACGATCAGTTTGTACTGAACTGGATGCACTTGATAGTGGTAATGGATGTGTGGTTTTAATTTTAAGGTCCTGTGTTTAATTCCTAACATATTTACATTTTTTTCTTAAAAAATGTTCACAAGTTTTTCTTTAAAAAGTTTGGAGGGACATATCTTCCTCCGAATTTCTCTTTTTTAGTTTGTACAGAGCTATAGGTGTCATTGAGGAACAGGATTTACAGATGCTACAGAAAGAGAGAAAACTGAGAAGCATAAGCTACCATCTTACGCAAGTTGGACTCTGCAGCAAGCAAAATTTACGCCAAACATGGTAGATGCAGTCATGCTGTATGCATCTTACATCAGTATCATATCTAATTAGACATTAGATCACCTCAAAGATGATGACGCACACCCATCTTCCATCTCCATCAAAAGGCATGCGTCCATGGATAACCAGCCGATTCAGTATCCTGGCAGCTCCGCCGCCGGCACGAAGGAGACCATCTCGCGGGACGGCACCCAGGCCTTGACGACGACGACGGCGTCGAACACCAGCTCGTCGTCGGCCTCCTGGGCAGCGATGCGGAGGTAGTACTTGATCCCGGAGACCACCTGCGTCTGCGCCGCCACGACCCTGGAGAAGACCAGCCCGCGGCCGCGGGTGGCCGACCCCCCTCGCCGGTTGTGTTCCACGACGCAGAAGAGCCCGAGCTCCTGCACCTCCCTGTTCCCCTCCACGTCCTCCACGTCCGTCCTCCCGCCGACCTTCCTCCCGCGGCCGCCGCCCGCCGGCCACTGCCCGTCGTCGTCGGCGGCGGCGGCGGCGGCGAGGCGCGCGGACGAGAGCGGCGCGAGGAGGAGAAGCACCAGCACGAGCGGGGCGACGGCGTAATACAGCTTGGAGGCCATAGTTTTGTACTTTCGCTTGCTAGCTAATTATATGTTTGGATTTCGCAGTTTTGCACAGATGTACAGAGGCGAGAGACGATATAGGTAGGGTGGTGTGTACTGCAGTGCAGGTGTTCGCGTGACCACGTAGCGACGCGCGCGTGTGTGCATGCGGCGCCACGGCGCGGCATCACGTGGACCCTGCAGCTGCTCCGCGCAACAGCAAGCTCGGCCTTTGTCCGGCGTTGCGTGACGAGGGGCGGGCGAAGCTAGCGTTTGTGGACTAGAAAAAAGGATGGAGTTTGTTCCATCTTTTTGTATGCATGTTGCATGGATATGAAAAGTAGCAAAGGGGTGATC]
[+] EMBL AK119435 [GTTTATTAAGATGAGTTAACTAGGCAGATCTCTTGCTGTTTCATGTGGCTTCTACCACACAGCTAACATGAGTTACACCCTGCAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAATTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATATACTTTTTTTTTTCTTCTGCAACATGTATGCGCGATCAGGTTGTTGGTCTGGTCTGTCATCGTGATAAGTGGACCTGAAGATTGGTGGCAGTTCAGGTCGTGGATGGTTTGTTGCTTTCTTCCTTACAAGTACTAATTACATTTGGAGATCTATGCAGATTTCATGCGCAAGCTGGAACGCTATGCCTGGGCGCACCTTACTGCAGGAATTGCTGTGACTGAACTTTTGATGATGTCCCGTGGCTCTGCTGCATCCGCCC TT AAACTTGGTTCTCTTGTAGGCTTAACTGTTTTTGCAGGTTGTCGTTCTCTTCTCTGAAATTGTTGGTCTCGACAGTTTCAAACTTCAGTACCCGCCCTGTCCGGTGTTCGTCATTCACGGATAAGTTGGAAGGCACGGGTAAGATATATTGGCACGGTCCATGGAAACGTTGAACAGTGCACAAGGCTACTGCTGTTTGAGCTCCTCCCATTCCGCCAGGATCTCCTGAAATGTGTTTCAGGGGGAAAATGAACCGGACAGAGTGGCACCATGCAGTCATTTAGCACCTGCCAGTGCGATGACTTCACTACCAGAAGTGCCCAAGTAGCTAATCTTAAGGTAATCTGTTTCTGGTGCTCGGATAAACGGACACACCAGACCATAAGCCAGGTAAATACCATCGAATCACATCGTTAACGGCGGCGGCTACAGAACCATACGCGCAGTTTGGTGAGTTTGGTGTGGTTGATGACGTGGCTGGTCCGATGATTGGTCCAAAATGCCAGCATATACCGTCAATGATGATATACCGCCAAAATCAGGCAGGAAACGAGCGATCGATTCTTTGCCCGCTTCATTACTCTCTTCCCAAGGTACGCATCCGTCAATGATGATATACCGCCAAGTCTACAAAACTGAGGGCAATTGTTTCATCGTCGCGGTTATTAACCTTAGCTAT GGCGAATTACGGATTAGTGGGATTCGATAAAATCATAAGCAATGAATTTTCAGACGATAATAGAGCGGCTACGGTGATTTGCTAATGTCAAATTTGAGTCTTAATTAGCTCTTTTAGAACACCCAAAGTTTTTTCCACAAAAATCCTTCAACATTTATCTGGTACCGTTCCAGGAGGAGCCTTTTGGTTAGAGTGGCTTCATCGACCTTAGCTCACGCTAGGGTTTAGCTGACGACACGATCAGTTTGTACTGAACTGGATGCACTTGATAGTGGTAATGGATGTGTGGTTTTAATTTTAAGGTCCTGTGTTTAATTCCTAACATATTTACATTTTTTTCTTAAAAAATGTTCACAAGTTTTTCTTTAAAAAGTTTGGAGGGACATATCTTCCTCCGAATTTCTCTTTTTTAGTTTGTACAGAGCTATAGGTGTCATTGAGGAACAGGATTTACAGATGCTACAGAAAGAGAGAAAACTGAGAAGCATAAGCTACCATCTTACGCAAGTTGGACTCTGCAGCAAGCAAAATTTACGCCAAACATGGTAGATGCAGTCATGCTGTATGCATCTTACATCAGTATCATATCTAATTAGACATTAGATCACCTCAAAGATGATGACGCACACCCATCTTCCATCTCCATCAAAAGGCATGCGTCCATGGATAACCAGCCGATTCAGTATCCTGGCAGCTCCGCCGCCGGCACGAAGGAGACCATCTCGCGGGACGGCACCCAGGCCTTGACGACGACGACGGCGTCGAACACCAGCTCGTCGTCGGCCTCCTGGGCAGCGATGCGGAGGTAGTACTTGATCCCGGAGACCACCTGCGTCTGCGCCGCCACGACCCTGGAGAAGACCAGCCCGCGGCCGCGGGTGGCCGACCCCCCTCGCCGGTTGTGTTCCACGACGCAGAAGAGCCCGAGCTCCTGCACCTCCCTGTTCCCCTCCACGTCCTCCACGTCCGTCCTCCCGCCGACCTTCCTCCCGCGGCCGCCGCCCGCCGGCCACTGCCCGTCGTCGTCGGCGGCGGCGGCGGCGGCGAGGCGCGCGGACGAGAGCGGCGCGAGGAGGAGAAGCACCAGCACGAGCGGGGCGACGGCGTAATACAGCTTGGAGGCCATAGTTTTGTACTTTCGCTTGCTAGCTAATTATATGTTTGGATTTCGCAGTTTTGCACAGATGTACAGAGGCGAGAGACGATATAGGTAGGGTGGTGTGTACTGCAGTGCAGGTGTTCGCGTGACCACGTAGCGACGCGCGCGTGTGTGCATGCGGCGCCACGGCGCGGCATCACGTGGACCCTGCAGCTGCTCCGCGCAACAGCAAGCTCGGCCTTTGTCCGGCGTTGCGTGACGAGGGGCGGGCGAAGCTAGCGTTTGTGGACTAGAAAAAAGGATGGAGTTTGTTCCATCTTTTTGTATGCATGTTGCATGGATATGAAAAGTAGCAAAGGGGTGATC]
[-] EMBL CB630743 [ TGTCCCGTGGCTCTGCTGCAT CGCCCATTGAAACTTGGTTCTCTTGTAGGCTTAACTGTTTTTGCAGGTTGTCGTTCTCTTCTCTGAAATTGTTGGTCTCGACAGTTTCAAACTTCAGTACCCGCCCTGTCCGGTGTTCATCATTCACGGATAAGTTGGAAGGCACGGGTAAGATATATTGGCACGGTCCATGGAAACGTTGAACAGTGCACAAGGCTACTGCTGTTTGAGCTCCACCCATTCCGCCAGGATCTCCTGAAATGTGTTTCAGGGGGAAAATGAACCGGACAGAGTGGCACCATGCAGTCATTTAGCACCTGCCAGTGCGATGACTTCACTACCAGAAGTGCCCAAGTAGCTAATCTTAAGGTAATCTGTTTCTGGTGCTCGGATAAACGGACACACCAGACCATAAGCCAGGTAAATACCATCGAATCACATCGTTAACGGCGGCGGCTACAGAACCATACGCGCAGTTTGGTGAGTTTGGTGTGGTTGATGACGTGGCTGGTCCGATGATTGGTCCAAAATGCCAGCATATACCGTCAATGATGATATACCGCCAAAATCAGGCAGGAAACGAGCGATCGATTCTTTGCCCGCTTCATTACTCTCTTCCCAAGGTACGCATCCGTCAATGATGATATACCGCCAAGTCTGCAAAACTGAGGGCAATTGTTTCATCGTCGCGGTTATTAACCTTAGCTATGGGCGAATTACGGATTAGTGGGATTCGATAAAATCATAAGCAATGAATTTTCAGACGATAATAGAGCGGCTACGGTGATTTGCTAATGT ]
[+] EMBL D42713 [ GCAAAATTTACGCCAAACATGGTAGATGCAGTCAT CTGTATGCATCTTACATCAGTATCATATCTAATTAGACATTAGATCACCTCAAAGATGATGACGCACACCCATCTTCCATCTCCATCAAAAGGCATGCGTCCATGGATAACCAGCCGATTCAGTATCCTNNCAGCTCCGCCGCC ]
[-] EMBL CB638048 [ CCGCCCGCCGGCCAATGCCCGTAGTCGTCGGCGGCGGCGGCGGCGGCGAGGCGCGCGTACGAGAGCGGCGCTAGGAGGAGAAGCACCAGCACGAGCGGGGCGACGGCGTAATACAGCTTGGAGGCCATAGTTTTGTACTTTCGCTTGCTAGCTAATTATATGTTTGGATTTCGCAGTTTTGCACAGATGTACAGAGGCGAGAGATCATATAGGTAGGGTGGTGTGTACTGCAGTGCAGGTGTTCGCGTGACCACGTAGCAACGCGCGCGTGTGTGCATGCGGCGCCACGGCGCGGCATCACGTGGACCCTGCAGATGCTCCGCGCAACAGCAAGCTCGGCCTTTGTCCGGCGTTGCGTCACGAGGGGCGGGCGAAGCTAGCGTTTGTGGTTTAGA ]
consensusID : consensus_10772#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 696 fasta sequence
[ACTGTGTCTAGCTACTGGAATTGGGGAAGAGATGGTAGTCAATAGCCTGGAAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTACCAACAAGCTCAAGGCTGTTAGGATGACCTGTCCTTTGTNTGATACAGCTCGATGGGTAAAGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTCAACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATAAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTTTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATATACTTTTTTTTTAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA762203 [ACTGTGTCTAGCTACTGGAATTGGGGAAGAGATGGTAGTCAATAGCCTGGAAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTACCAACAAGCTCAAGGCTGTTAGGATGACCTGTCCTTTGTNTGATACAGCTCGATGGGTAAAGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTCAACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATAAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTTTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATATACTTTTTTTTTAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10772#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 662 fasta sequence
[GGNNTCGCNAGCTTGATNNGACGNGACAGGGGGGGGAAGAGATGGTNGTCATAGCCTGGAAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTACCAACAAGCTCAAGGCTGTTAGGATGGCCTGTCCTTTGTTTGATACAGCTCGATGGGTAAAGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTCAACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGNATTGTTGGACATTTCTTGAACTGATCGACAGNCAAAAAAAGGCATG]
[+] EMBL CA767222 [GGNNTCGCNAGCTTGATNNGACGNGACAGGGGGGGGAAGAGATGGTNGTCATAGCCTGGAAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTACCAACAAGCTCAAGGCTGTTAGGATGGCCTGTCCTTTGTTTGATACAGCTCGATGGGTAAAGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTCAACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGNATTGTTGGACATTTCTTGAACTGATCGACAGNCAAAAAAAGGCATG]
consensusID : consensus_10772#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 466 fasta sequence
[AGGATGCCTACCAGAGCAATGCAGGTTCCACATATGTAAATATGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATAT]
[+] EMBL CB629779 [AGGATGCCTACCAGAGCAATGCAGGTTCCACATATGTAAATATGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATAT]
consensusID : consensus_10772#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 250 fasta sequence
[AAATTACGCANACAGGTAGATGCAGTCATCTGTATGCATCTNACATCAGTATCATATCTAATTAGACATTAGATCACTCANAGTGATGCGACACCATCTTCATCTCATCAAAGGATCGTCATGATANCAGCCGTTAGTATCTNNAGCTCGCGCCGACGAGAGGGGATCTCTAGAGTGCCTCTGGCCTCGGACGGTGCATCAGTTTCCTTAGTGGTGATTATTGCTATTGCGTATATGGCATAGCTGTTCT]
[+] EMBL D42711 [AAATTACGCANACAGGTAGATGCAGTCATCTGTATGCATCTNACATCAGTATCATATCTAATTAGACATTAGATCACTCANAGTGATGCGACACCATCTTCATCTCATCAAAGGATCGTCATGATANCAGCCGTTAGTATCTNNAGCTCGCGCCGACGAGAGGGGATCTCTAGAGTGCCTCTGGCCTCGGACGGTGCATCAGTTTCCTTAGTGGTGATTATTGCTATTGCGTATATGGCATAGCTGTTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10772#1 ----------ACTGTGTCTAGCTACTGGAATTGGGGAAGAGATGGTAGTCAATAGCCTGG 50
consensus_10772#2 GGNNTCGCNAGCTTGATNNGACGNGACAGGGGGGGGAAGAGATGGTNGTCA-TAGCCTGG 59
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ------------------------------------------------------------
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 AAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTA 110
consensus_10772#2 AAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTA 119
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ------------------------------------------------------------
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 CCAACAAGCTCAAGGCTGTTAGGATGACCTGTCCTTTGTNTGATACAGCTCGATGGGTAA 170
consensus_10772#2 CCAACAAGCTCAAGGCTGTTAGGATGGCCTGTCCTTTGTTTGATACAGCTCGATGGGTAA 179
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ------------------------------------------------------------
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 AGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTC 230
consensus_10772#2 AGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTC 239
consensus_10772#3 ------------------------------AGGATGCCTACCAGAGCAATGCAGGTTCCA 30
consensus_10772#0 ------------------------------------------------------------
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 AACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATAAGCG 290
consensus_10772#2 AACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCG 299
consensus_10772#3 CATATGTAAATATGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCG 90
consensus_10772#0 -GTTTATTAAGATG--AGTTAACTAGGCAGATCTCTTGCTGTTTCATGTGGCTTCTACCA 57
consensus_10772#4 ---------AAATTACGCANACAGGTAGATGCAGTCATCTGTATGCATCTNACATCAGTA 51
* * * * * *
consensus_10772#1 GGTCGTGTGGTTGTGTAA-ATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTC 349
consensus_10772#2 GGTCGTGTGGTTGTGTAA-ATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTC 358
consensus_10772#3 GGTCGTGTGGTTGTGTAA-ATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTC 149
consensus_10772#0 CACAGCTAACATGAGTTA-CACCCTGCAGAGAGAGAGGTAACATAAGCCTTTTCACCTTC 116
consensus_10772#4 TCATATCTAATTAGACATTAGATCACTC-ANAGTGATGCGACACCA---TCTTCATCTCA 107
* * ** ** * *** * * **** **
consensus_10772#1 TTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTA 409
consensus_10772#2 TTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTA 418
consensus_10772#3 TTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTA 209
consensus_10772#0 TTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTA 176
consensus_10772#4 TCAAAGGATCGTCAT--GATANCAGCCGTTAGTATCTNNAGCTCGCGCCG---ACGAGAG 162
* ** * * * * ** ** * ** * ** * * ** **
consensus_10772#1 GAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAG 469
consensus_10772#2 GAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAG 478
consensus_10772#3 GAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAG 269
consensus_10772#0 GAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAG 236
consensus_10772#4 GGGATCTCTAG---AGTGCCTCTGGCC-TCGGACGGTGCATCAGTTTCCTTAGTGGTGAT 218
* **** * ** ** * * **** * ** * * * * *
consensus_10772#1 TGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTC-TTGTCACCCCGTTTTGAGTTT 528
consensus_10772#2 TGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCCTTGTCACCCCGTTCTGAGTTT 538
consensus_10772#3 TGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTC-TTGTCACCCCGTTCTGAGTTT 328
consensus_10772#0 TGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTC-TTGTCACCCCGTTCTGAGTTT 295
consensus_10772#4 TATTGCTATTGCGTATATGG-CATAGCTGTTCT--------------------------- 250
* ** * * * ** * **** * ***
consensus_10772#1 TGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCT 588
consensus_10772#2 TGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCT 598
consensus_10772#3 TGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCT 388
consensus_10772#0 TGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCT 355
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 TATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGG 648
consensus_10772#2 TATCAATATTAGGAGTGNATTGTTGGACATTTCTTGAACTGATCGACAGNCAAAAAAAGG 658
consensus_10772#3 TATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGG 448
consensus_10772#0 TATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAATTGATCGACAGTCAAAAAAAGG 415
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 CATGCAAAATAGATATATACTTTTTTTTTAAAAAAAAAAAAAAAAAAA------------ 696
consensus_10772#2 CATG-------------------------------------------------------- 662
consensus_10772#3 CATGCAAAATAGATATAT------------------------------------------ 466
consensus_10772#0 CATGCAAAATAGATATATACTTTTTTTTTTCTTCTGCAACATGTATGCGCGATCAGGTTG 475
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 TTGGTCTGGTCTGTCATCGTGATAAGTGGACCTGAAGATTGGTGGCAGTTCAGGTCGTGG 535
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ATGGTTTGTTGCTTTCTTCCTTACAAGTACTAATTACATTTGGAGATCTATGCAGATTTC 595
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ATGCGCAAGCTGGAACGCTATGCCTGGGCGCACCTTACTGCAGGAATTGCTGTGACTGAA 655
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 CTTTTGATGATGTCCCGTGGCTCTGCTGCATCCGCCCTTAAACTTGGTTCTCTTGTAGGC 715
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 TTAACTGTTTTTGCAGGTTGTCGTTCTCTTCTCTGAAATTGTTGGTCTCGACAGTTTCAA 775
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ACTTCAGTACCCGCCCTGTCCGGTGTTCGTCATTCACGGATAAGTTGGAAGGCACGGGTA 835
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 AGATATATTGGCACGGTCCATGGAAACGTTGAACAGTGCACAAGGCTACTGCTGTTTGAG 895
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 CTCCTCCCATTCCGCCAGGATCTCCTGAAATGTGTTTCAGGGGGAAAATGAACCGGACAG 955
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 AGTGGCACCATGCAGTCATTTAGCACCTGCCAGTGCGATGACTTCACTACCAGAAGTGCC 1015
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 CAAGTAGCTAATCTTAAGGTAATCTGTTTCTGGTGCTCGGATAAACGGACACACCAGACC 1075
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ATAAGCCAGGTAAATACCATCGAATCACATCGTTAACGGCGGCGGCTACAGAACCATACG 1135
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 CGCAGTTTGGTGAGTTTGGTGTGGTTGATGACGTGGCTGGTCCGATGATTGGTCCAAAAT 1195
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 GCCAGCATATACCGTCAATGATGATATACCGCCAAAATCAGGCAGGAAACGAGCGATCGA 1255
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 TTCTTTGCCCGCTTCATTACTCTCTTCCCAAGGTACGCATCCGTCAATGATGATATACCG 1315
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 CCAAGTCTACAAAACTGAGGGCAATTGTTTCATCGTCGCGGTTATTAACCTTAGCTATGG 1375
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 CGAATTACGGATTAGTGGGATTCGATAAAATCATAAGCAATGAATTTTCAGACGATAATA 1435
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 GAGCGGCTACGGTGATTTGCTAATGTCAAATTTGAGTCTTAATTAGCTCTTTTAGAACAC 1495
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 CCAAAGTTTTTTCCACAAAAATCCTTCAACATTTATCTGGTACCGTTCCAGGAGGAGCCT 1555
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 TTTGGTTAGAGTGGCTTCATCGACCTTAGCTCACGCTAGGGTTTAGCTGACGACACGATC 1615
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 AGTTTGTACTGAACTGGATGCACTTGATAGTGGTAATGGATGTGTGGTTTTAATTTTAAG 1675
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 GTCCTGTGTTTAATTCCTAACATATTTACATTTTTTTCTTAAAAAATGTTCACAAGTTTT 1735
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 TCTTTAAAAAGTTTGGAGGGACATATCTTCCTCCGAATTTCTCTTTTTTAGTTTGTACAG 1795
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 AGCTATAGGTGTCATTGAGGAACAGGATTTACAGATGCTACAGAAAGAGAGAAAACTGAG 1855
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 AAGCATAAGCTACCATCTTACGCAAGTTGGACTCTGCAGCAAGCAAAATTTACGCCAAAC 1915
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ATGGTAGATGCAGTCATGCTGTATGCATCTTACATCAGTATCATATCTAATTAGACATTA 1975
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 GATCACCTCAAAGATGATGACGCACACCCATCTTCCATCTCCATCAAAAGGCATGCGTCC 2035
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ATGGATAACCAGCCGATTCAGTATCCTGGCAGCTCCGCCGCCGGCACGAAGGAGACCATC 2095
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 TCGCGGGACGGCACCCAGGCCTTGACGACGACGACGGCGTCGAACACCAGCTCGTCGTCG 2155
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 GCCTCCTGGGCAGCGATGCGGAGGTAGTACTTGATCCCGGAGACCACCTGCGTCTGCGCC 2215
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 GCCACGACCCTGGAGAAGACCAGCCCGCGGCCGCGGGTGGCCGACCCCCCTCGCCGGTTG 2275
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 TGTTCCACGACGCAGAAGAGCCCGAGCTCCTGCACCTCCCTGTTCCCCTCCACGTCCTCC 2335
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ACGTCCGTCCTCCCGCCGACCTTCCTCCCGCGGCCGCCGCCCGCCGGCCACTGCCCGTCG 2395
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 TCGTCGGCGGCGGCGGCGGCGGCGAGGCGCGCGGACGAGAGCGGCGCGAGGAGGAGAAGC 2455
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 ACCAGCACGAGCGGGGCGACGGCGTAATACAGCTTGGAGGCCATAGTTTTGTACTTTCGC 2515
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 TTGCTAGCTAATTATATGTTTGGATTTCGCAGTTTTGCACAGATGTACAGAGGCGAGAGA 2575
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 CGATATAGGTAGGGTGGTGTGTACTGCAGTGCAGGTGTTCGCGTGACCACGTAGCGACGC 2635
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 GCGCGTGTGTGCATGCGGCGCCACGGCGCGGCATCACGTGGACCCTGCAGCTGCTCCGCG 2695
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 CAACAGCAAGCTCGGCCTTTGTCCGGCGTTGCGTGACGAGGGGCGGGCGAAGCTAGCGTT 2755
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 ------------------------------------------------------------
consensus_10772#2 ------------------------------------------------------------
consensus_10772#3 ------------------------------------------------------------
consensus_10772#0 TGTGGACTAGAAAAAAGGATGGAGTTTGTTCCATCTTTTTGTATGCATGTTGCATGGATA 2815
consensus_10772#4 ------------------------------------------------------------
consensus_10772#1 -----------------------
consensus_10772#2 -----------------------
consensus_10772#3 -----------------------
consensus_10772#0 TGAAAAGTAGCAAAGGGGTGATC 2838
consensus_10772#4 -----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||