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Oryza sativa
cluster # 10774 cluster # 10774       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10774#0 length = 2725 sequences # 7  
consensus_10774#1 length = 457 sequences # 1  

consensusID : consensus_10774#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2725
fasta sequence
                              [CGTCTCCATGGTCGACTTGACCTCTTCTTCCTCTTCCTCCCCCTCCTCCGCTTACTCCAATCCTTCTCTCCTCCCGCGACGCCGCTGCCCACTCACCATAGCCCCGACCTCCGCAGCCACCTGACGCGCGCTCGCTCGCTTCTTGGTGGTGTTCGGTTTGGC---------GCTGCTGCTGCTGCTATGCCGAGAACGGCGGCGGGGGTGGACGTGGAGGACCTCCTCGTCCGCGTCAAGAACGGCGCCGACGCCGAGCTCGCCGAGGTGGCGCGGGAGGTGGCGGCGCTCGCGGAGCAGGGGAGGCTCGGGGAGGACGACGACGAGGACGGGGTCCTGGTGCCGGCGCTGCTCGCGCGGCTCGCCGCCGCCGGGGGCGCGGAGGCCAGGGTCCGCGTCATGGCCGCGCTGCGGCGGCTCGCGCGCTGCGTTGGCTGCGAGAGCAAGGAGAGGTTAGCAAGCATCGAGGCACTTTCAAGCATTGTTCGTTCCTTGTCTAGAGATGTTGACGAGACAAGGGAAGCAATTGCATTGCTATTGGATTTGTCAGACATCCCGCAAGTTCGGCAGAGGATTGGCAGGATTAAAGGCAGTATAGTAATGCTAGTCACATTAAGAAATGCACATGAACCAGGTACCCATGATGATGCAGAGAAATTGCTGCACATGTTGTCATCCAATCCGCAAAATGTGCTCCTGATGGCCGAGGCTGGTTATTTTCGACCATTGATACATTACCTGAAAGAAGGTTCTGATATGAACAAGATCCTAATGGCAACTGCTATTTCTAAAATGTTCCTCTCTGAGCCGATGAAATCTTCCCTTGGAGAAGATGGTGCAGTTGAGCCTCTAGTGGAAATGTTTAAATCCGGAAATCTTGAAGCCAAGCACTCGGCCCTAGGTGCCTTACTTAATCTCTCTAGCTCTCTACAAAATGCAGAAATTTTGATAAATTCTGGCATAACAGGACCACTGCTCCAACTTCTATTCTCTGTCACGTCAGTGTTAATGACCCTTAGAGAGCCAGCCTCAGCTATACTTGCAGCTATTGCACAATCTGAGCGTATCCTGCTTCATAAGGATGTAGCTCCTCAAATGCTCTCGCTTCTTAACTTATCGAGTCCAGTAATTCAACTTCACCTCCTAAGGGCCCTAAATAGTATTTCTGGGCACACAAATGCTAAAAGAGCTAGAGCTAAAATTAGACAAAATGGTGGAGTGCAACTCCTCCTGCCCTTCCTGACAGAAAAGAATATTGATATCAAAATTGCTGCTTTGAATTTTATTTCCAATCTGTCAAAAGATGCTTCACAGGAATTAGCTGAGCAGATTAGGGATACCCACCTTAATATTTTCGTGAAGATTATCTCTTCACCTACATCTGGAAATGAGAAGGCTGCAGCTATTGGTATCCTAAGCAACCTCCCAGTGACAGACAAGAAGATTACTGAGTTACTCACTGAAGCAAACTTGCTTCCTCTCCTGATATCCTTACTTGAGATAAACATCACAGCGCCATTGACACCATTGAGAACGTCTTTACTTGAGGGCATTGCTGGCGTGTTAATTCGGTTCACAGTCCCTTGGGATAAAAAATTACAAAGTTTAGCAGTTGGACATGGGGTGGTTCCTTGCCTTGTTAAGTTGCTTTCGGAAGGATCAATAAAAGCCAAGTCTAAAGCAGCAACATCCTTGGCTCAACTGTCACAGAATTCACTAGCATTACGTAAGACAAAATTGCCAAGGTGGCTTTGTGTTGCCCCATCAGCTGAAACTTACTGTTTAGTTCACAACTCCCAGTGCACTGTCAAAAGCACTTTCTGCTTAGTGAAAGCTGGTGCTGTCAGTCCTCTGATCCAAATCTTAGAAGATGACAATCGTGAAGCAGATGGTGCAGTATTGGAAGCACTAGCTACCCTTATGCAGGATGAGATTTGGGAAAACGGGAGCAAGGTGATAGAAAAGGCATCAGGTGTTCATGCTCTGCTGAGAATTGCTGAGGCAGGAAACTCAACTTCCCAGGAGAAGGCGATATGGATGCTTGAGAGGATCTTCCGGCTTGAAGCCCACAGAGAGCGTTATGGTGAAATCGCACAAGCTTTGCTCATTGATCTTGCTCAGAAAGGAGATCCTATCCTGAAACCAATGATTGGAAAGATACTTGCTCACCTTGAGCTACTTCAAACACAATCGAGCTACTTTTAAGCATGTTTGGGGTGCAACTGTCCATGCTGAAACTAGCAAAATGGCATGTGTAACTGGCCTTTTGCAAG-TTATGCTGCGCAATGCATGTTGAGCATACGCTTGAATGATGTCTGATCCAGGTTTGCCAGGCAGTGATCTTCTCCACCAAATGTTACTGTGGACCAATTTGAAGAATGTTTCAACTGTGACATTGTACCTCCGGAAGAAGTGATTTTGTGGGGTTACAGACTTCCAGTTGTGGCTGTACAAATAGCAATCTAGCAGAGCAAAGGGTGATTGTGCATCGTGGACAGCAATCTTGTGTTGGTCTGTCATTTTTGTTAGTTCGTGGATTATATAGTGTTTAAAGGAGATAGATTGCAAGTTGTATAGTTAGTCATGTGCCATTTCTTCTTTTGTGTATAAAATGGTGATATGAATCAAAAAG--AAAAAAAAAACAGTGATATATACTAGTACAATTGTTTTGTACAGCGAACTTGTTCAACAGGGCAATAGATGAAGATCATTCTTTTTGAGAAAAAAAAAAAGA]

[+] EMBL AK119342             [CGTCTCCATGGTCGACTTGACCTCTTCTTCCTCTTCCTCCCCCTCCTCCGCTTACTCCAATCCTTCTCTCCTCCCGCGACGCCGCTGCCCACTCACCATAGCCCCGACCTCCGCAGCCACCTGACGCGCGCTCGCTCGCTTCTTGGTGGTGTTCGGTTTGGC         GCTGCTGCTGCTGCTATGCCGAGAACGGCGGCGGGGGTGGACGTGGAGGACCTCCTCGTCCGCGTCAAGAACGGCGCCGACGCCGAGCTCGCCGAGGTGGCGCGGGAGGTGGCGGCGCTCGCGGAGCAGGGGAGGCTCGGGGAGGACGACGACGAGGACGGGGTCCTGGTGCCGGCGCTGCTCGCGCGGCTCGCCGCCGCCGGGGGCGCGGAGGCCAGGGTCCGCGTCATGGCCGCGCTGCGGCGGCTCGCGCGCTGCGTTGGCTGCGAGAGCAAGGAGAGGTTAGCAAGCATCGAGGCACTTTCAAGCATTGTTCGTTCCTTGTCTAGAGATGTTGACGAGACAAGGGAAGCAATTGCATTGCTATTGGATTTGTCAGACATCCCGCAAGTTCGGCAGAGGATTGGCAGGATTAAAGGCAGTATAGTAATGCTAGTCACATTAAGAAATGCACATGAACCAGGTACCCATGATGATGCAGAGAAATTGCTGCACATGTTGTCATCCAATCCGCAAAATGTGCTCCTGATGGCCGAGGCTGGTTATTTTCGACCATTGATACATTACCTGAAAGAAGGTTCTGATATGAACAAGATCCTAATGGCAACTGCTATTTCTAAAATGTTCCTCTCTGAGCCGATGAAATCTTCCCTTGGAGAAGATGGTGCAGTTGAGCCTCTAGTGGAAATGTTTAAATCCGGAAATCTTGAAGCCAAGCACTCGGCCCTAGGTGCCTTACTTAATCTCTCTAGCTCTCTACAAAATGCAGAAATTTTGATAAATTCTGGCATAACAGGACCACTGCTCCAACTTCTATTCTCTGTCACGTCAGTGTTAATGACCCTTAGAGAGCCAGCCTCAGCTATACTTGCAGCTATTGCACAATCTGAGCGTATCCTGCTTCATAAGGATGTAGCTCCTCAAATGCTCTCGCTTCTTAACTTATCGAGTCCAGTAATTCAACTTCACCTCCTAAGGGCCCTAAATAGTATTTCTGGGCACACAAATGCTAAAAGAGCTAGAGCTAAAATTAGACAAAATGGTGGAGTGCAACTCCTCCTGCCCTTCCTGACAGAAAAGAATATTGATATCAAAATTGCTGCTTTGAATTTTATTTCCAATCTGTCAAAAGATGCTTCACAGGAATTAGCTGAGCAGATTAGGGATACCCACCTTAATATTTTCGTGAAGATTATCTCTTCACCTACATCTGGAAATGAGAAGGCTGCAGCTATTGGTATCCTAAGCAACCTCCCAGTGACAGACAAGAAGATTACTGAGTTACTCACTGAAGCAAACTTGCTTCCTCTCCTGATATCCTTACTTGAGATAAACATCACAGCGCCATTGACACCATTGAGAACGTCTTTACTTGAGGGCATTGCTGGCGTGTTAATTCGGTTCACAGTCCCTTGGGATAAAAAATTACAAAGTTTAGCAGTTGGACATGGGGTGGTTCCTTGCCTTGTTAAGTTGCTTTCGGAAGGATCAATAAAAGCCAAGTCTAAAGCAGCAACATCCTTGGCTCAACTGTCACAGAATTCACTAGCATTACGTAAGACAAAATTGCCAAGGTGGCTTTGTGTTGCCCCATCAGCTGAAACTTACTGTTTAGTTCACAACTCCCAGTGCACTGTCAAAAGCACTTTCTGCTTAGTGAAAGCTGGTGCTGTCAGTCCTCTGATCCAAATCTTAGAAGATGACAATCGTGAAGCAGATGGTGCAGTATTGGAAGCACTAGCTACCCTTATGCAGGATGAGATTTGGGAAAACGGGAGCAAGGTGATAGAAAAGGCATCAGGTGTTCATGCTCTGCTGAGAATTGCTGAGGCAGGAAACTCAACTTCCCAGGAGAAGGCGATATGGATGCTTGAGAGGATCTTCCGGCTTGAAGCCCACAGAGAGCGTTATGGTGAAATCGCACAAGCTTTGCTCATTGATCTTGCTCAGAAAGGAGATCCTATCCTGAAACCAATGATTGGAAAGATACTTGCTCACCTTGAGCTACTTCAAACACAATCGAGCTACTTTTAAGCATGTTTGGGGTGCAACTGTCCATGCTGAAACTAGCAAAATGGCATGTGTAACTGGCCTTTTGCAAG TTATGCTGCGCAATGCATGTTGAGCATACGCTTGAATGATGTCTGATCCAGGTTTGCCAGGCAGTGATCTTCTCCACCAAATGTTACTGTGGACCAATTTGAAGAATGTTTCAACTGTGACATTGTACCTCCGGAAGAAGTGATTTTGTGGGGTTACAGACTTCCAGTTGTGGCTGTACAAATAGCAATCTAGCAGAGCAAAGGGTGATTGTGCATCGTGGACAGCAATCTTGTGTTGGTCTGTCATTTTTGTTAGTTCGTGGATTATATAGTGTTTAAAGGAGATAGATTGCAAGTTGTATAGTTAGTCATGTGCCATTTCTTCTTTTGTGTATAAAATGGT                                                                                                                        ]
[+] EMBL CB633759             [                                                                                                                                   TCGCTCGCTTCTTGGTGGTGTTCGGTTTGGCGCTGCTGCTGCTGCTGCTGCTGCTATGCCGAGAACGGCGGCGGGGGTGGACGTGGAGGACCTCCTCGTCCGCGTCAAGAACGGCGCCGACGCCGAGCTCGCCGAGGTGGCGCGGGAGGTGGCGGCGCTCGCGGAGCAGGGGAGGCTCGGGGAGGACGACGACGAGGACGGGGTCCTGGTGCCGGCGCTGCTCGCGCGGCTCGCCGCCGCCGGGGGCGCGGAGGCCAGGGTCCGCGTCATGGCCGCGCTGCGGCGGCTCGCGCGCTGCGTTGGCTGCGAGAGCAAGGAGAGGTTAGCAAGCATCGAGGCACTTTCAAGCATTGTTCGTTCCTTGTCTAGAGATGTTGACGAGACAAGGGAAGCAATTGCATTGCTATTGGATTTGTCAGACATCCCGCAAGTTCGGCAGAGGATTGGCAGGATTAAAGGCAGTATAGTAATGCTAGTCACATTAAGAAATGCACATGAACCAGGTACCCATGATGATGCAGAGAAATTGCTGCACATGTTGTCATCCAATCCGCAAAATGTGCTCCTGATGGCCGAGGCTGGTTATTTTCGACCATTGATACATTACCTGAAAGAAGGTTCTGATATGAACAAGATCCTAATGGCAACTGCTATTTCTATAATGTTCCTCTCTGAGCCGATGAAATCTTCCCTTGGAGAAGATGGTGCAGTTGAGCCTCTAGTGGAAATGTTTATATCCTGAAATCTTGca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB637244             [                                                                                                                                                                                                                                                                                                                                                                              GCCGCCGGGGGCGCGGAGGCCAGGGTCCGCGTCATGGCCGCGCTGCGGCGGCTCGCGCGCTGCGTTGGCTGCGAGAGCAAGGAGAGGTTAGCAAGCATCGAGGCACTTTCAAGCATTGTTCGTTCCTTGTCTAGAGATGTTGACGAGACAAGGGAAGCAATTGCATTGCTATTGGATTTGTCAGACATCCCGCAAGTTCGGCAGAGGATTGGCAGGATTAAAGGCAGTATAGTAATGCTAGTCACATTAAGAAATGCACATGAACCAGGTACCCATGATGATGCAGAGAAATTGCTGCACATGTTGTCATCCAATCCGCAAAATGTGCTCCTGATGGCCGAGGCTGGTTATTTTCCACCATTGATACATTACCTGAAAGAAGGTTCTGATATGAACAAGATCCTAATGGCAACTGCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF329828             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTAGCAGTTGGACATGGGGTGGTTCCTTGCCTTGTTAAGTTGCTTTCGGAAGGATCAATAAAAGCCAAGTCTAAAGCAGCAACATCCTTGGCTCAACTGTCACAGAATTCACTAGCATTACGTAAGACAAAATTGCCAAGGTGGCTTTGTGTTGCCCCATCAGCTGAAACTTACTGTTTAGTTCACAACTCCCAGTGCACTGTCAAAAGCACTTTCTGCTTAGTGAAAGCTGGTGCTGTCAGTCCTCTGATCCAAATCTTAGAAGATGACAATCGTGAAGCAGATGGTGCAGTATTGGAAGCACTAGCTACCCTTATGCAGGATGAGATTTGGGAAAACGGGAGCAAGGTGATAGAAAAGGCATCAGGTGTTCATGCTCTGCTGAGAATTGCTGAGGCAGGAAACTCAACTTCCCAGGAGAAGGCGATATGGATGCTTGAGAGGATCTTCCGGCTTGAAGCCCACAGAGAGCGTTATGGTGAAATCGCACAAGCTTTGCTCATTGATCTTGCTCAAAAAGGAGATCCTATCCTGAAACCAATGATTGGAAAGATACTTGCTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB633760             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAGATTGGGAAAAACGGGAGCAAGGTGATAGAAAAGGCATCAGGTGTTCATGCTCTGCTGAGAATTGCTGAGGCAGGAAACTCAACTTCCCAGGAGAAGGCGATATGGATGCTTGAGAGGATCTTCCGGCTTGAAGCCCACAGAGAGCGTTATGGTGAAATCGCACAAGCTTTGCTCATTGATCTTGCTCAGAAAGGAGATCCTATCCTGAAACCAATGATTGGAAAGATACTTGCTCACCTTGAGCTACTTCAAACACAATCGAGCTACTTTTAAGCATGTTTGGGGTGCAACTGTCCATGCTGAAACTAGCAAAATGGCATGTGTAACTGGCCTTTTGCAAG TTATGCTGCGCAATGCATGTTGAGCATACGCTTGAATGATGTCTGATCCAGGTTTGCCAGGCAGTGATCTTCTCCACCAAATGTTACTGTGGACCAATTTGAAGAATGTTTCAACTGTGACATTGTACCTCCGGAAGAAGTGATTTTGTGGGGTTACAGACTTCCAGTTGTGGCTGTACAAATAGCAATCTAGCAGAGCAAAGGGAGATTGTGCATCGTGGACAGCAATCTTGTGTTGGTCTGTCATTTTTGTTAGTTCGTGGATTATATAGTGTTTAAAGGAGATAGATTTCAAGTTGTATAGTTAGTCATGTGCCGTTTCTTCTTTTGTGTATAAAATGGTGATAGGAATCAAAAAG  ATAAAAAAAACAGTGATATATACTAGTACAATTGTTTTGTACAGCGAACTTGTTCAACAGGGCAATAGATGAAGATCATTCTTTTTGAGAAAAAAAAAAAGA]
[-] EMBL CF329829             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTTGGGGTGCAACTGTCCATGCTGAAACTAGCAAAATGGCATGTGTAACTGGCCTTTTGCAAG TTATGCTGCGCAACGCATGTTGAGCATACGCTTGAATGATGTCTGATCCAGGTTTGCCAGGCAGTGATCTTCTCCACCAAATGTTACTGTGGACCAATTTGAAGAATGTTTCAACTGTGACATTGTACCTCCGGAAGAAGTGATTTTGTGGGTTTACAGACTTCCAGTTGTGGCTGTACAAATAGCAATCTAGCAGAGCAAAGGGTGATTGTGCATCGTGGACAGCAATCTTGTGTTGGTCTGTCATTTTTGATAGTTCGTGGATTATATAGTGTTTAAAGGAGATAGATTGCAAGCTGAATAGTTAGTCATGTGCCATTTCTTCTTTTGTGTATAAAATGGTGATATGAATCAAAAAGAAAAAAAAAAAACAGTGATATATACTAGTACAATTGTTTTGTACAGCGAACTTGTTCAACATAGCAATAGATGAAGATCATTCTTTTTGAGAAAAAA       ]
[+] EMBL AU162097             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCATGCTGAAACTAGCAAAATGGCATGTGTAACTGGCCTTTTGCAAGTTTAT NTGCGCAATGCATGTTGAGCATACGCTTGAATGATGTCTGATCCAGGTTTGCCAGGCAGTGATCTTCTCCACCAAATGTTACTGTGGACCAATTTGAAGAATGTTTCAACTGTGACATTGTACCTCCGGAAGAAGTGATTTTGTGGGGTTACAGACTTCCAGTTGTGGCTGTACAAATAGCAATCTAGCAGAGCAAAGGGTGATTGTGCATCGTGGACAGCAATCTTGTGTTGGTCTGTNATTTTTGTTAGTTCGTGGATTATATAGTGTTTAAAGGAGATAGATTGCAAGTTGTATAGTTAGTCATGTGCCATTTCTTCTTTTGTGTATAAAATGGTGATATGAATCAAAAAG  AAAAAAAAAAaaaaaa                                                                                      ]


>consensus_10774#0 CGTCTCCATGGTCGACTTGACCTCTTCTTCCTCTTCCTCCCCCTCCTCCGCTTACTCCAA TCCTTCTCTCCTCCCGCGACGCCGCTGCCCACTCACCATAGCCCCGACCTCCGCAGCCAC CTGACGCGCGCTCGCTCGCTTCTTGGTGGTGTTCGGTTTGGCGCTGCTGCTGCTGCTATG CCGAGAACGGCGGCGGGGGTGGACGTGGAGGACCTCCTCGTCCGCGTCAAGAACGGCGCC GACGCCGAGCTCGCCGAGGTGGCGCGGGAGGTGGCGGCGCTCGCGGAGCAGGGGAGGCTC GGGGAGGACGACGACGAGGACGGGGTCCTGGTGCCGGCGCTGCTCGCGCGGCTCGCCGCC GCCGGGGGCGCGGAGGCCAGGGTCCGCGTCATGGCCGCGCTGCGGCGGCTCGCGCGCTGC GTTGGCTGCGAGAGCAAGGAGAGGTTAGCAAGCATCGAGGCACTTTCAAGCATTGTTCGT TCCTTGTCTAGAGATGTTGACGAGACAAGGGAAGCAATTGCATTGCTATTGGATTTGTCA GACATCCCGCAAGTTCGGCAGAGGATTGGCAGGATTAAAGGCAGTATAGTAATGCTAGTC ACATTAAGAAATGCACATGAACCAGGTACCCATGATGATGCAGAGAAATTGCTGCACATG TTGTCATCCAATCCGCAAAATGTGCTCCTGATGGCCGAGGCTGGTTATTTTCGACCATTG ATACATTACCTGAAAGAAGGTTCTGATATGAACAAGATCCTAATGGCAACTGCTATTTCT AAAATGTTCCTCTCTGAGCCGATGAAATCTTCCCTTGGAGAAGATGGTGCAGTTGAGCCT CTAGTGGAAATGTTTAAATCCGGAAATCTTGAAGCCAAGCACTCGGCCCTAGGTGCCTTA CTTAATCTCTCTAGCTCTCTACAAAATGCAGAAATTTTGATAAATTCTGGCATAACAGGA CCACTGCTCCAACTTCTATTCTCTGTCACGTCAGTGTTAATGACCCTTAGAGAGCCAGCC TCAGCTATACTTGCAGCTATTGCACAATCTGAGCGTATCCTGCTTCATAAGGATGTAGCT CCTCAAATGCTCTCGCTTCTTAACTTATCGAGTCCAGTAATTCAACTTCACCTCCTAAGG GCCCTAAATAGTATTTCTGGGCACACAAATGCTAAAAGAGCTAGAGCTAAAATTAGACAA AATGGTGGAGTGCAACTCCTCCTGCCCTTCCTGACAGAAAAGAATATTGATATCAAAATT GCTGCTTTGAATTTTATTTCCAATCTGTCAAAAGATGCTTCACAGGAATTAGCTGAGCAG ATTAGGGATACCCACCTTAATATTTTCGTGAAGATTATCTCTTCACCTACATCTGGAAAT GAGAAGGCTGCAGCTATTGGTATCCTAAGCAACCTCCCAGTGACAGACAAGAAGATTACT GAGTTACTCACTGAAGCAAACTTGCTTCCTCTCCTGATATCCTTACTTGAGATAAACATC ACAGCGCCATTGACACCATTGAGAACGTCTTTACTTGAGGGCATTGCTGGCGTGTTAATT CGGTTCACAGTCCCTTGGGATAAAAAATTACAAAGTTTAGCAGTTGGACATGGGGTGGTT CCTTGCCTTGTTAAGTTGCTTTCGGAAGGATCAATAAAAGCCAAGTCTAAAGCAGCAACA TCCTTGGCTCAACTGTCACAGAATTCACTAGCATTACGTAAGACAAAATTGCCAAGGTGG CTTTGTGTTGCCCCATCAGCTGAAACTTACTGTTTAGTTCACAACTCCCAGTGCACTGTC AAAAGCACTTTCTGCTTAGTGAAAGCTGGTGCTGTCAGTCCTCTGATCCAAATCTTAGAA GATGACAATCGTGAAGCAGATGGTGCAGTATTGGAAGCACTAGCTACCCTTATGCAGGAT GAGATTTGGGAAAACGGGAGCAAGGTGATAGAAAAGGCATCAGGTGTTCATGCTCTGCTG AGAATTGCTGAGGCAGGAAACTCAACTTCCCAGGAGAAGGCGATATGGATGCTTGAGAGG ATCTTCCGGCTTGAAGCCCACAGAGAGCGTTATGGTGAAATCGCACAAGCTTTGCTCATT GATCTTGCTCAGAAAGGAGATCCTATCCTGAAACCAATGATTGGAAAGATACTTGCTCAC CTTGAGCTACTTCAAACACAATCGAGCTACTTTTAAGCATGTTTGGGGTGCAACTGTCCA TGCTGAAACTAGCAAAATGGCATGTGTAACTGGCCTTTTGCAAGTTATGCTGCGCAATGC ATGTTGAGCATACGCTTGAATGATGTCTGATCCAGGTTTGCCAGGCAGTGATCTTCTCCA CCAAATGTTACTGTGGACCAATTTGAAGAATGTTTCAACTGTGACATTGTACCTCCGGAA GAAGTGATTTTGTGGGGTTACAGACTTCCAGTTGTGGCTGTACAAATAGCAATCTAGCAG AGCAAAGGGTGATTGTGCATCGTGGACAGCAATCTTGTGTTGGTCTGTCATTTTTGTTAG TTCGTGGATTATATAGTGTTTAAAGGAGATAGATTGCAAGTTGTATAGTTAGTCATGTGC CATTTCTTCTTTTGTGTATAAAATGGTGATATGAATCAAAAAGAAAAAAAAAACAGTGAT ATATACTAGTACAATTGTTTTGTACAGCGAACTTGTTCAACAGGGCAATAGATGAAGATC ATTCTTTTTGAGAAAAAAAAAAAGA



consensusID : consensus_10774#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 457
fasta sequence
                              [GAACTGGCCTGTTTGCAAGTTNATGCTGCGCAAATGCATGTTGAGCATGACGCTTGGAATGGATGTGCTGATGCCAGGTGTTGCCAGGCAAGTGATGCTGTGCTGCCACCTAATGTNTACTGGTGGGACCAATTTTGAAGAATGGTGTTGCAACTGGTGACATTGTACCTGCCGGAAGAAGTGATTTTGTGGGGTTACAGACTTCCAGTTGTGGCTGTACAAATAGCAATCTAGCAGAGCAAAGGGAGATTGTGCATCGTGGACAGCAAATGCTTGGTGGTGTGGGTGCTGGTGCATGTGTTTGGTTGAGTTGCGTGGGATTATATGAGTGGTGTTAAAGGAGATAGATTTCAAGTTGTATAGTTAGNCATGTGCCGTTTCTTCTTTTGTGTATAAAATGGNGATATGAATCAAAAGATAAAAAACAGTGATATATACTAGTACAATTGTTTNTGTA]

[+] EMBL BQ907635             [GAACTGGCCTGTTTGCAAGTTNATGCTGCGCAAATGCATGTTGAGCATGACGCTTGGAATGGATGTGCTGATGCCAGGTGTTGCCAGGCAAGTGATGCTGTGCTGCCACCTAATGTNTACTGGTGGGACCAATTTTGAAGAATGGTGTTGCAACTGGTGACATTGTACCTGCCGGAAGAAGTGATTTTGTGGGGTTACAGACTTCCAGTTGTGGCTGTACAAATAGCAATCTAGCAGAGCAAAGGGAGATTGTGCATCGTGGACAGCAAATGCTTGGTGGTGTGGGTGCTGGTGCATGTGTTTGGTTGAGTTGCGTGGGATTATATGAGTGGTGTTAAAGGAGATAGATTTCAAGTTGTATAGTTAGNCATGTGCCGTTTCTTCTTTTGTGTATAAAATGGNGATATGAATCAAAAGATAAAAAACAGTGATATATACTAGTACAATTGTTTNTGTA]


>consensus_10774#1 GAACTGGCCTGTTTGCAAGTTNATGCTGCGCAAATGCATGTTGAGCATGACGCTTGGAAT GGATGTGCTGATGCCAGGTGTTGCCAGGCAAGTGATGCTGTGCTGCCACCTAATGTNTAC TGGTGGGACCAATTTTGAAGAATGGTGTTGCAACTGGTGACATTGTACCTGCCGGAAGAA GTGATTTTGTGGGGTTACAGACTTCCAGTTGTGGCTGTACAAATAGCAATCTAGCAGAGC AAAGGGAGATTGTGCATCGTGGACAGCAAATGCTTGGTGGTGTGGGTGCTGGTGCATGTG TTTGGTTGAGTTGCGTGGGATTATATGAGTGGTGTTAAAGGAGATAGATTTCAAGTTGTA TAGTTAGNCATGTGCCGTTTCTTCTTTTGTGTATAAAATGGNGATATGAATCAAAAGATA AAAAACAGTGATATATACTAGTACAATTGTTTNTGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10774#0      CGTCTCCATGGTCGACTTGACCTCTTCTTCCTCTTCCTCCCCCTCCTCCGCTTACTCCAA 60
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TCCTTCTCTCCTCCCGCGACGCCGCTGCCCACTCACCATAGCCCCGACCTCCGCAGCCAC 120
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CTGACGCGCGCTCGCTCGCTTCTTGGTGGTGTTCGGTTTGGCGCTGCTGCTGCTGCTATG 180
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CCGAGAACGGCGGCGGGGGTGGACGTGGAGGACCTCCTCGTCCGCGTCAAGAACGGCGCC 240
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GACGCCGAGCTCGCCGAGGTGGCGCGGGAGGTGGCGGCGCTCGCGGAGCAGGGGAGGCTC 300
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GGGGAGGACGACGACGAGGACGGGGTCCTGGTGCCGGCGCTGCTCGCGCGGCTCGCCGCC 360
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GCCGGGGGCGCGGAGGCCAGGGTCCGCGTCATGGCCGCGCTGCGGCGGCTCGCGCGCTGC 420
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GTTGGCTGCGAGAGCAAGGAGAGGTTAGCAAGCATCGAGGCACTTTCAAGCATTGTTCGT 480
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TCCTTGTCTAGAGATGTTGACGAGACAAGGGAAGCAATTGCATTGCTATTGGATTTGTCA 540
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GACATCCCGCAAGTTCGGCAGAGGATTGGCAGGATTAAAGGCAGTATAGTAATGCTAGTC 600
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      ACATTAAGAAATGCACATGAACCAGGTACCCATGATGATGCAGAGAAATTGCTGCACATG 660
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TTGTCATCCAATCCGCAAAATGTGCTCCTGATGGCCGAGGCTGGTTATTTTCGACCATTG 720
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      ATACATTACCTGAAAGAAGGTTCTGATATGAACAAGATCCTAATGGCAACTGCTATTTCT 780
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      AAAATGTTCCTCTCTGAGCCGATGAAATCTTCCCTTGGAGAAGATGGTGCAGTTGAGCCT 840
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CTAGTGGAAATGTTTAAATCCGGAAATCTTGAAGCCAAGCACTCGGCCCTAGGTGCCTTA 900
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CTTAATCTCTCTAGCTCTCTACAAAATGCAGAAATTTTGATAAATTCTGGCATAACAGGA 960
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CCACTGCTCCAACTTCTATTCTCTGTCACGTCAGTGTTAATGACCCTTAGAGAGCCAGCC 1020
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TCAGCTATACTTGCAGCTATTGCACAATCTGAGCGTATCCTGCTTCATAAGGATGTAGCT 1080
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CCTCAAATGCTCTCGCTTCTTAACTTATCGAGTCCAGTAATTCAACTTCACCTCCTAAGG 1140
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GCCCTAAATAGTATTTCTGGGCACACAAATGCTAAAAGAGCTAGAGCTAAAATTAGACAA 1200
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      AATGGTGGAGTGCAACTCCTCCTGCCCTTCCTGACAGAAAAGAATATTGATATCAAAATT 1260
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GCTGCTTTGAATTTTATTTCCAATCTGTCAAAAGATGCTTCACAGGAATTAGCTGAGCAG 1320
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      ATTAGGGATACCCACCTTAATATTTTCGTGAAGATTATCTCTTCACCTACATCTGGAAAT 1380
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GAGAAGGCTGCAGCTATTGGTATCCTAAGCAACCTCCCAGTGACAGACAAGAAGATTACT 1440
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GAGTTACTCACTGAAGCAAACTTGCTTCCTCTCCTGATATCCTTACTTGAGATAAACATC 1500
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      ACAGCGCCATTGACACCATTGAGAACGTCTTTACTTGAGGGCATTGCTGGCGTGTTAATT 1560
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CGGTTCACAGTCCCTTGGGATAAAAAATTACAAAGTTTAGCAGTTGGACATGGGGTGGTT 1620
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CCTTGCCTTGTTAAGTTGCTTTCGGAAGGATCAATAAAAGCCAAGTCTAAAGCAGCAACA 1680
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TCCTTGGCTCAACTGTCACAGAATTCACTAGCATTACGTAAGACAAAATTGCCAAGGTGG 1740
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CTTTGTGTTGCCCCATCAGCTGAAACTTACTGTTTAGTTCACAACTCCCAGTGCACTGTC 1800
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      AAAAGCACTTTCTGCTTAGTGAAAGCTGGTGCTGTCAGTCCTCTGATCCAAATCTTAGAA 1860
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GATGACAATCGTGAAGCAGATGGTGCAGTATTGGAAGCACTAGCTACCCTTATGCAGGAT 1920
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GAGATTTGGGAAAACGGGAGCAAGGTGATAGAAAAGGCATCAGGTGTTCATGCTCTGCTG 1980
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      AGAATTGCTGAGGCAGGAAACTCAACTTCCCAGGAGAAGGCGATATGGATGCTTGAGAGG 2040
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      ATCTTCCGGCTTGAAGCCCACAGAGAGCGTTATGGTGAAATCGCACAAGCTTTGCTCATT 2100
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      GATCTTGCTCAGAAAGGAGATCCTATCCTGAAACCAATGATTGGAAAGATACTTGCTCAC 2160
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      CTTGAGCTACTTCAAACACAATCGAGCTACTTTTAAGCATGTTTGGGGTGCAACTGTCCA 2220
consensus_10774#1      ------------------------------------------------------------
                                                                                   

consensus_10774#0      TGCTGAAACTAGCAAAATGGCATGTGTAACTGGCCT-TTTGCAAGTTA-TGCTGCGCAA- 2277
consensus_10774#1      --------------------------GAACTGGCCTGTTTGCAAGTTNATGCTGCGCAAA 34
                                                  ********* **********  ********** 

consensus_10774#0      TGCATGTTGAGCAT-ACGCTTGAAT--GATGT-CTGAT-CCAGGT-TTGCCAGGCA-GTG 2330
consensus_10774#1      TGCATGTTGAGCATGACGCTTGGAATGGATGTGCTGATGCCAGGTGTTGCCAGGCAAGTG 94
                       ************** ******* *   ***** ***** ****** ********** ***

consensus_10774#0      ATCTTCT----CCACCAAATGTT-ACTGT--GGACCAATTT-GAAGAATG---TTTCAAC 2379
consensus_10774#1      ATGCTGTGCTGCCACCTAATGTNTACTGGTGGGACCAATTTTGAAGAATGGTGTTGCAAC 154
                       **  * *    ***** *****  ****   ********** ********   ** ****

consensus_10774#0      TG-TGACATTGTACCT-CCGGAAGAAGTGATTTTGTGGGGTTACAGACTTCCAGTTGTGG 2437
consensus_10774#1      TGGTGACATTGTACCTGCCGGAAGAAGTGATTTTGTGGGGTTACAGACTTCCAGTTGTGG 214
                       ** ************* *******************************************

consensus_10774#0      CTGTACAAATAGCAATCTAGCAGAGCAAAGGGTGATTGTGCATCGTGGACAGCAAT--CT 2495
consensus_10774#1      CTGTACAAATAGCAATCTAGCAGAGCAAAGGGAGATTGTGCATCGTGGACAGCAAATGCT 274
                       ******************************** **********************   **

consensus_10774#0      TG----------TGTTGGTCTGTCATTTTTGTTAGTTCGTG---GATTATAT-AGTGTT- 2540
consensus_10774#1      TGGTGGTGTGGGTGCTGGTGCATGTGTTTGGTTGAGTTGCGTGGGATTATATGAGTGGTG 334
                       **          ** ****   *   *** ***   * * *   ******** **** * 

consensus_10774#0      -TAAAGGAGATAGATTGCAAGTTGTATAGTTAGTCATGTGCCATTTCTTCTTTTGTGTAT 2599
consensus_10774#1      TTAAAGGAGATAGATTTCAAGTTGTATAGTTAGNCATGTGCCGTTTCTTCTTTTGTGTAT 394
                        *************** **************** ******** *****************

consensus_10774#0      AAAATGGTGATATGAATCAAAAAGAAAAAAAAAACAGTGATATATACTAGTACAATTGTT 2659
consensus_10774#1      AAAATGGNGATATGAATCAAAAG---ATAAAAAACAGTGATATATACTAGTACAATTGTT 451
                       ******* **************    * ********************************

consensus_10774#0      TTGTACAGCGAACTTGTTCAACAGGGCAATAGATGAAGATCATTCTTTTTGAGAAAAAAA 2719
consensus_10774#1      TN-TGTA----------------------------------------------------- 457
                       *  *  *                                                     

consensus_10774#0      AAAAGA 2725
consensus_10774#1      ------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)