cluster # 108

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Oryza sativa
cluster # 108 cluster # 108 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_108#0 length = 665 sequences # 2

consensusID : consensus_108#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 665
fasta sequence

                              [TTTTTTTTTTTTGAGCATCAATAATAAATTCCTGATAACTTTAACTTGTTCCGAGAGGATTACAACCAAACCATGCATAAATCAAACATGAATCTAAAATTTTAAGACAAACCATGACTCTNAAAAAGATGATGACAACTAAAAGGATCAGAACTCACACCAAACCAGGCATTAATCAACCATGAAACCTAAATTCTTATAAAATAACAACCATGACACTAAATGATGACAGATAGTCCCTTGATTTTCCTCTGAAACCTAAGCGCTGCTCTTGTTCTTCTTGCTCCTGGTCTCCTGAAGGATGTGCTCTAGAATCTCAAGCTTCAGCTTGGGCACACATAGATCAGCACCAGCATCTTTGAACTCTTCCATGCTGTTGGCGTCAACTGAGACTCCAACAATCATCACATCAGTAGCACCCATGGCACGGATCTTGGATGTTGCCTCAGGACCAGTCATGATGGGCATAAGATTGTCAGTCAAAACAATATCAAATGTTTCTCCTCCAAGGAATAGTTCAACAGCTTCTTTTCCATTCTGAACCACAGTGGTTTCAACTTGGAATTTGCGCAGCATCTGCGACAGGATCATGCGGTTCACTTTGATGTCCTCAACGAGCAATGCCCTCAGGTTGGATCCTTGNGTTTGGAACGCCATGAGAGCAA]

[+] EMBL CA762493             [TTTTTTTTTTTTGAGCATCAATAATAAATTCCTGATAACTTTAACTTGTTCCGAGAGGATTACAACCAAACCATGCATAAATCAAACATGAATCTAAAATTTTAAGACAAACCATGACTCTNAAAAAGATGATGACAACTAAAAGGATCAGAACTCACACCAAACCAGGCATTAATCAACCATGAAACCTAAATTCTTATAAAATAACAACCATGACACTAAATGATGACAGATAGTCCCTTGATTTTCCTCTGAAACCTAAGCGCTGCTCTTGTTCTTCTTGCTCCTGGTCTCCTGAAGGATGTGCTCTAGAATCTCAAGCTTCAGCTTGGGCACACATAGATCAGCACCAGCATCTTTGAACTCTTCCATGCTGTTGGCGTCAACTGAGACTCCAACAATCATCACATCAGTAGCACCCATGGCACGGATCTTGGATGTTGCCTCAGGACCAGTCATGATGGGCATAAGATTGTCAGTCAAAACAATATCAAATGTTTCTCCTCCAAGGAATAGTTCAACAGCTTCTTTTCCATTCTGAACCACAGTGGTTTCAACTTGGAATTTGCGCAGCATCTGCGACAGGATCATGCGGTTCACTTTGATGTCCTCAACGAGCAATGCCCTCAGGTTGGATCCTTGNGTTTGGAACGCCATGAGAGCAA]
[-] EMBL AA750189             [                                                                                                                                                                                                                   CATGACACT SATGATGACAGATAGTCCCTTGA  STCTTCTGAAACCTAAGCGCTGCTCTTGTTCTTCTTGCTCCTGGTCTCCTGAAGGATGTGCTCTAGAATCTCAAGCTTCAGCTTGGGCACACATAGATCAGCACCAGCATCTTTGAACTCTTCCATGCTGTTGGC                                                                                                                                                                                                                                                                                            ]




>consensus_108#0
TTTTTTTTTTTTGAGCATCAATAATAAATTCCTGATAACTTTAACTTGTTCCGAGAGGAT
TACAACCAAACCATGCATAAATCAAACATGAATCTAAAATTTTAAGACAAACCATGACTC
TNAAAAAGATGATGACAACTAAAAGGATCAGAACTCACACCAAACCAGGCATTAATCAAC
CATGAAACCTAAATTCTTATAAAATAACAACCATGACACTAAATGATGACAGATAGTCCC
TTGATTTTCCTCTGAAACCTAAGCGCTGCTCTTGTTCTTCTTGCTCCTGGTCTCCTGAAG
GATGTGCTCTAGAATCTCAAGCTTCAGCTTGGGCACACATAGATCAGCACCAGCATCTTT
GAACTCTTCCATGCTGTTGGCGTCAACTGAGACTCCAACAATCATCACATCAGTAGCACC
CATGGCACGGATCTTGGATGTTGCCTCAGGACCAGTCATGATGGGCATAAGATTGTCAGT
CAAAACAATATCAAATGTTTCTCCTCCAAGGAATAGTTCAACAGCTTCTTTTCCATTCTG
AACCACAGTGGTTTCAACTTGGAATTTGCGCAGCATCTGCGACAGGATCATGCGGTTCAC
TTTGATGTCCTCAACGAGCAATGCCCTCAGGTTGGATCCTTGNGTTTGGAACGCCATGAG
AGCAA

clustalw multiple alignements is not computed in this case