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Oryza sativa
cluster # 10800 cluster # 10800       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10800#0 length = 1604 sequences # 2  
consensus_10800#1 length = 924 sequences # 5  
consensus_10800#2 length = 731 sequences # 1  

consensusID : consensus_10800#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1604
fasta sequence
                              [CGAACCCTACCCTAACGCCATTCCCCACCCCAGCAGCAGCAGCAGCAGACGCCAGTCACCTCGCAATCTCACGCGGTCACCCGCCGCATGACCGCGGCTCGATAGCGCCGCCGCCTCGCCGCCGGGCGTCCTCCTCCCCGGCGCCACCGCGTCGGCCTCCCTCCCCTCCCCTCCCCTCCCCTCCCCGAGCGCCCACCGCGTCGACCTCCAACCCCCGGGCCCCCACACCGCGTCCTCTTCGAGATCCGCATCCGCCCCCGCCGCCGCCTCTTGTCCTCTTCCCCGGCCGCCGCTGTTCCTCGATCCTGATTTGCTGGTGGCCGGCCGCCGGCGGAGCAGCCCGGAAGGTCTACGGCGCGCCGGCGATGTCGCCCAGCACCCTCGCTGCGTCGACCAGTATGAAATGGAGCAGCTGAATCCCCAAGCCTCACTTTAGGTCTGCCGCTGTTACAATGAGTCCATCAAGGAGCAGGAGCAACAGCAGGAGCAGAAGCAGAAGCAGAAGCGGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGTCGCAGCAGGAGCAGGAGCCGAAGCCGAAGCCCTCGGCGAGAAAGGCTGCGTAGTGAGCGTGTATCACGTCGCAGCCGCAGCCGCAGCCGAGCCGTAGCCCAATTCGTAGAAGAGAACATCGCGGCCACAGACACTTCGCAGCAGAATGCACTTCTGAAACTGTTTGTTGGAACTGCAAGCAGTCTGGCCACATTGCTACCGAATGCAAGAATGACGCCCTGTGTCACACCTGCAGCAAGACAGGTCATCTGGCACGTGATTGCCCAAGTTCAGGATCTAGTAAGCTATGCAACAAATGTTTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCGTCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGTCTCTGGGCATCTTGCTCGGAACTGTCAAAAAACGACCATTTCTTCAGAGATACAGGGCGGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGCAACTGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCACTGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCATTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTTGAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACTGCTTTGGTAGACCAGGCCATATCAAGTATTGTGCATGACTGTTTGAGCTATTTGACTCCTCCAAGCTTGCTCCTCCCCACTGACTGTTGCGTCGAGTTGTCCTCATTGTTCTGTATTCTCATATTATCTTCCTGGAAGAAAAGTTGACGAGTGAGATCAGGATAATCATTAAAAGGA]

[+] EMBL AK100155             [CGAACCCTACCCTAACGCCATTCCCCACCCCAGCAGCAGCAGCAGCAGACGCCAGTCACCTCGCAATCTCACGCGGTCACCCGCCGCATGACCGCGGCTCGATAGCGCCGCCGCCTCGCCGCCGGGCGTCCTCCTCCCCGGCGCCACCGCGTCGGCCTCCCTCCCCTCCCCTCCCCTCCCCTCCCCGAGCGCCCACCGCGTCGACCTCCAACCCCCGGGCCCCCACACCGCGTCCTCTTCGAGATCCGCATCCGCCCCCGCCGCCGCCTCTTGTCCTCTTCCCCGGCCGCCGCTGTTCCTCGATCCTGATTTGCTGGTGGCCGGCCGCCGGCGGAGCAGCCCGGAAGGTCTACGGCGCGCCGGCGATGTCGCCCAGCACCCTCGCTGCGTCGACCAGTATGAAATGGAGCAGCTGAATCCCCAAGCCTCACTTTAGGTCTGCCGCTGTTACAATGAGTCCATCAAGGAGCAGGAGCAACAGCAGGAGCAGAAGCAGAAGCAGAAGCGGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGTCGCAGCAGGAGCAGGAGCCGAAGCCGAAGCCCTCGGCGAGAAAGGCTGCGTAGTGAGCGTGTATCACGTCGCAGCCGCAGCCGCAGCCGAGCCGTAGCCCAATTCGTAGAAGAGAACATCGCGGCCACAGACACTTCGCAGCAGAATGCACTTCTGAAACTGTTTGTTGGAACTGCAAGCAGTCTGGCCACATTGCTACCGAATGCAAGAATGACGCCCTGTGTCACACCTGCAGCAAGACAGGTCATCTGGCACGTGATTGCCCAAGTTCAGGATCTAGTAAGCTATGCAACAAATGTTTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCGTCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGTCTCTGGGCATCTTGCTCGGAACTGTCAAAAAACGACCATTTCTTCAGAGATACAGGGCGGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGCAACTGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCACTGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCATTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTTGAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACTGCTTTGGTAGACCAGGCCATATCAAGTATTGTGCATGACTGTTTGAGCTATTTGACTCCTCCAAGCTTGCTCCTCCCCACTGACTGTTGCGTCGAGTTGTCCTCATTGTTCTGTATTCTCATATTATCTTCCTGGAAGAAAAGTTGACGAGTGAGAT                    ]
[-] EMBL CB669427             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGTCATCTGGCACGTGATTGCCCAAGTTCAGGATCTAGTAAGCTATGCAACAAATGTTTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCGTCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGTCTCTGGGCATCTTGCTCGGAACTGTCAAAAAACGACCATTTCTTCAGAGATACAGGGCGGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGCAACTGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCACTGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCATTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTTGAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACTGCTTTGGTAGACCAGGCCATATCAAGTATTGTGCATGACTGTTTGAGCTATTTGACTCCTCCAAGCTTGCTCCTCCCCACTGACTGTTGCGTCGAGTTGTCCTCATTGTTCTGTATTCTCATATTATCTTCAAGGGAGAAAAGTTGACGAGTGAGATCAGGATAATCATTAAAAGGA]


>consensus_10800#0 CGAACCCTACCCTAACGCCATTCCCCACCCCAGCAGCAGCAGCAGCAGACGCCAGTCACC TCGCAATCTCACGCGGTCACCCGCCGCATGACCGCGGCTCGATAGCGCCGCCGCCTCGCC GCCGGGCGTCCTCCTCCCCGGCGCCACCGCGTCGGCCTCCCTCCCCTCCCCTCCCCTCCC CTCCCCGAGCGCCCACCGCGTCGACCTCCAACCCCCGGGCCCCCACACCGCGTCCTCTTC GAGATCCGCATCCGCCCCCGCCGCCGCCTCTTGTCCTCTTCCCCGGCCGCCGCTGTTCCT CGATCCTGATTTGCTGGTGGCCGGCCGCCGGCGGAGCAGCCCGGAAGGTCTACGGCGCGC CGGCGATGTCGCCCAGCACCCTCGCTGCGTCGACCAGTATGAAATGGAGCAGCTGAATCC CCAAGCCTCACTTTAGGTCTGCCGCTGTTACAATGAGTCCATCAAGGAGCAGGAGCAACA GCAGGAGCAGAAGCAGAAGCAGAAGCGGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGA GTCGCAGCAGGAGCAGGAGCCGAAGCCGAAGCCCTCGGCGAGAAAGGCTGCGTAGTGAGC GTGTATCACGTCGCAGCCGCAGCCGCAGCCGAGCCGTAGCCCAATTCGTAGAAGAGAACA TCGCGGCCACAGACACTTCGCAGCAGAATGCACTTCTGAAACTGTTTGTTGGAACTGCAA GCAGTCTGGCCACATTGCTACCGAATGCAAGAATGACGCCCTGTGTCACACCTGCAGCAA GACAGGTCATCTGGCACGTGATTGCCCAAGTTCAGGATCTAGTAAGCTATGCAACAAATG TTTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCG TCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGT CTCTGGGCATCTTGCTCGGAACTGTCAAAAAACGACCATTTCTTCAGAGATACAGGGCGG CCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGCAACTG CATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCC ATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCAC TGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCATTGATTCTGCTTAGATAGCTTGCT TGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTTGAGGAATGATTCT GTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTG GGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACTGCTTTGGTAGACC AGGCCATATCAAGTATTGTGCATGACTGTTTGAGCTATTTGACTCCTCCAAGCTTGCTCC TCCCCACTGACTGTTGCGTCGAGTTGTCCTCATTGTTCTGTATTCTCATATTATCTTCCT GGAAGAAAAGTTGACGAGTGAGATCAGGATAATCATTAAAAGGA



consensusID : consensus_10800#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 924
fasta sequence
                              [AACATCGCGGCCACAGGGATCTTATATGCAAGAATTGCAGGAGGCCTGGTCACTTTGCTAGGGATTGCCAATCTACTGCTACATGCAACAGATGCAATCTTCCAGGACACTTCGCAGCAGAATGCACTTCTGAAACTGTTTGTTGGAACTGCAAGCAGTCTGGCCACATTGCTACCGAATGCAAGAATGACGCCCTGTGTCACACCTGCAGCAAGACAGGTCATCTGGCACGTGATTGCCCAAGTTCAGGATCTAGTAAGCTATGCAACAAATG-TTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCGTCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGTCTCTGGGCATCTTGCTCGGAACTGTCGAAAAACGA-CCATTTCTTCAGAGATACAGGGTGGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGC-AACTGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCACTGCTGGTTTTGATGCTCGGAATTTCGCATTGTTCCA-TTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTT-GAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACTGCTTTGGTAGACCAGGCCATATCAAGTATTGTGCATGACTGTTTGAGCTAAAAAAAAAAAAAAA]

[+] EMBL CF321457             [AACATCGCGGCCACAGGGATCTTATATGCAAGAATTGCAGGAGGCCTGGTCACTTTGCTAGGGATTGCCAATCTACTGCTACATGCAACAGATGCAATCTTCCAGGACACTTCGCAGCAGAATGCACTTCTGAAACTGTTTGTTGGAACTGCAAGCAGTCTGGCCACATTGCTACCGAATGCAAGAATGACGCCCTGTGTCACACCTGCAGCAAGACAGGTCATCTGGCACGTGATTGCCCAAGTTCAGGATCTAGTAAGCTATGCAACAAATGTTTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCGTCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGTCTCTGGGCATCTTGCTCGGAACTGTCAAAAAACGA CCATTTCTTCAGAGATACAGGGCGGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGC AACTGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACA                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CA759037             [                                                                                                                                                                                                                                                 AAGTTCAGGATCTAGTAAGCTATGCAACAAATG TTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCGTCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGTCTCTGGGCATCTTGCTCGGAACTGTCGAAAAACGA CCATTTCTTAAGAGATACAGGGTGGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGC AACTGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTTTGATGACAGCCATCCATACGCACTGCTGGTTTTGATGCTCGGAATTTCGCATTGTTCCA TTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTT GAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACTGCTTTGGTAGACCAGGCCATATCAAGTATTGTGCATGACTGTTTGAGCTAAAAAAAAAAAAAAA]
[-] EMBL CA759038             [                                                                                                                                                                                                                                                 AAGTTCAGGATCTAGTAAGCTATGCAACAAATG TTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCGTCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGTCTCTGGGCATCTTGCTCGGAACTGTCGAAAAACGA CCATTTCTTAAGAGATACAGGGTGGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGC AACTGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTTTGATGACAGCCATCCATACGCACTGCTGGTTTTGATGCTCGGAATTTCGCATTGTTCCA TTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTT GAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACTGCTTTGGTAGACCAGGCCATATCAAGTATTGTGCATGACTGTTTGAGCTAAAAAAAAAAAAAAA]
[+] EMBL BI811797             [                                                                                                                                                                                                                                                                                                                                                                                                       TGTCTCTGGGCATCTTGCTCGGAACTGTCGAAAAACGACCCATTTCTTCAGAGATACAGGGTGGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGC AACTGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCACTGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCACTTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAATTCGAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAAC AAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACTGCTTTGGTAGACCAGGCCATATCAAGTATTGTGCATGACTGTTTGAGCTAAAAA          ]
[+] EMBL BI811687             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTGTGTGGCAATCCAGGGCACATCA CCGCAAACTGCATGACAACCATGATCTGTGGCACCTGC GTGGGAGGGTTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCC CAGGTTCTGATGACAGCCATCCATACGCACTGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCA TTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAATT GAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAAC AAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACTGCTTTGGTAGACCAGGCCATATCAAGTATTGTGCATGACTGTTTGAGCTAAAAA          ]


>consensus_10800#1 AACATCGCGGCCACAGGGATCTTATATGCAAGAATTGCAGGAGGCCTGGTCACTTTGCTA GGGATTGCCAATCTACTGCTACATGCAACAGATGCAATCTTCCAGGACACTTCGCAGCAG AATGCACTTCTGAAACTGTTTGTTGGAACTGCAAGCAGTCTGGCCACATTGCTACCGAAT GCAAGAATGACGCCCTGTGTCACACCTGCAGCAAGACAGGTCATCTGGCACGTGATTGCC CAAGTTCAGGATCTAGTAAGCTATGCAACAAATGTTTAAGCCAGGCCACATTGCTGTTGA CTGCACCAACGAGCGGGCTTGCAACAACTGTCGTCAGCCTGGGCACATAGCTCGGGAGTG CACGAACGAGCCTGTTTGCAACCTGTGCAATGTCTCTGGGCATCTTGCTCGGAACTGTCG AAAAACGACCATTTCTTCAGAGATACAGGGTGGCCCTTTCCGTGACATTACCTGCCGCTT GTGTGGCAAGCCAGGGCACATCAGCCGCAACTGCATGACAACCATGATCTGTGGCACCTG CGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCT CCGCAGGTTCTGATGACAGCCATCCATACGCACTGCTGGTTTTGATGCTCGGAATTTCGC ATTGTTCCATTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATA CCTTTTGCTCTCTGGGAGTTGAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTG CTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAACAAAATGATGTATCTTCCCAA GAGAGACATCCAGAAAAACTGCTTTGGTAGACCAGGCCATATCAAGTATTGTGCATGACT GTTTGAGCTAAAAAAAAAAAAAAA



consensusID : consensus_10800#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 731
fasta sequence
                              [TGTTTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCGTCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGTCTCTGGGCATCTTGCTCGGAACTGTCAAAAAACGACCATTTCTTCAGAGATACAGGGCGGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGCAACTGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCACTGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCATTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTTGAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAGAGGGGAGGGGAGGGAGGCCGACGCGGTGGCGCCGGGGAGGAGGACGCCCGGCGGCGAGGCGGCGGCGCTATCGAGCCGCGGTCATGCGGCGGGTGACCGCGTGAGATTGCGAGGTGACTGGCGTCTGCTGCTGCTGCTGCTGGGGTG]

[-] EMBL CB669426             [TGTTTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCGTCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGTCTCTGGGCATCTTGCTCGGAACTGTCAAAAAACGACCATTTCTTCAGAGATACAGGGCGGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGCAACTGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCACTGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCATTGATTCTGCTTAGATAGCTTGCTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTTGAGGAATGATTCTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTGGGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAGAGGGGAGGGGAGGGAGGCCGACGCGGTGGCGCCGGGGAGGAGGACGCCCGGCGGCGAGGCGGCGGCGCTATCGAGCCGCGGTCATGCGGCGGGTGACCGCGTGAGATTGCGAGGTGACTGGCGTCTGCTGCTGCTGCTGCTGGGGTG]


>consensus_10800#2 TGTTTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGT CGTCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAAT GTCTCTGGGCATCTTGCTCGGAACTGTCAAAAAACGACCATTTCTTCAGAGATACAGGGC GGCCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGCAAC TGCATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGC CCATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGC ACTGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCATTGATTCTGCTTAGATAGCTTG CTTGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTTGAGGAATGATT CTGTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCG TGGGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAGAGGGGAGGGGAGGGAG GCCGACGCGGTGGCGCCGGGGAGGAGGACGCCCGGCGGCGAGGCGGCGGCGCTATCGAGC CGCGGTCATGCGGCGGGTGACCGCGTGAGATTGCGAGGTGACTGGCGTCTGCTGCTGCTG CTGCTGGGGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10800#0      CGAACCCTACCCTAACGCCATTCCCCACCCCAGCAGCAGCAGCAGCAGACGCCAGTCACC 60
consensus_10800#1      ------------------------------------------------------------
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      TCGCAATCTCACGCGGTCACCCGCCGCATGACCGCGGCTCGATAGCGCCGCCGCCTCGCC 120
consensus_10800#1      ------------------------------------------------------------
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      GCCGGGCGTCCTCCTCCCCGGCGCCACCGCGTCGGCCTCCCTCCCCTCCCCTCCCCTCCC 180
consensus_10800#1      ------------------------------------------------------------
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      CTCCCCGAGCGCCCACCGCGTCGACCTCCAACCCCCGGGCCCCCACACCGCGTCCTCTTC 240
consensus_10800#1      ------------------------------------------------------------
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      GAGATCCGCATCCGCCCCCGCCGCCGCCTCTTGTCCTCTTCCCCGGCCGCCGCTGTTCCT 300
consensus_10800#1      ------------------------------------------------------------
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      CGATCCTGATTTGCTGGTGGCCGGCCGCCGGCGGAGCAGCCCGGAAGGTCTACGGCGCGC 360
consensus_10800#1      ------------------------------------------------------------
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      CGGCGATGTCGCCCAGCACCCTCGCTGCGTCGACCAGTATGAAATGGAGCAGCTGAATCC 420
consensus_10800#1      ------------------------------------------------------------
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      CCAAGCCTCACTTTAGGTCTGCCGCTGTTACAATGAGTCCATCAAGGAGCAGGAGCAACA 480
consensus_10800#1      ------------------------------------------------------------
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      GCAGGAGCAGAAGCAGAAGCAGAAGCGGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGA 540
consensus_10800#1      ------------------------------------------------------------
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      GTCGCAGCAGGAGCAGGAGCCGAAGCCGAAGCCCTCGGCGAGAAAGGCTGCGTAGTGAGC 600
consensus_10800#1      ---------------AACATCGCGGCCACAGGGATCTTATATGCAAGAATTGCAGGAGGC 45
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      GTGTATCACGTCGCAGCCGCAGCCGCAGCCGAGCCGTAGCCCAATTCGTAGAAGAGAACA 660
consensus_10800#1      CTG-GTCACTTTGC-----TAGGGATTGCCAATCTACTGCTACATGCAACAGATGCAATC 99
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      TCGCGGCCACAGACACTTCGCAGCAGAATGCACTTCTGAAACTGTTTGTTGGAACTGCAA 720
consensus_10800#1      TTCCAG-----GACACTTCGCAGCAGAATGCACTTCTGAAACTGTTTGTTGGAACTGCAA 154
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      GCAGTCTGGCCACATTGCTACCGAATGCAAGAATGACGCCCTGTGTCACACCTGCAGCAA 780
consensus_10800#1      GCAGTCTGGCCACATTGCTACCGAATGCAAGAATGACGCCCTGTGTCACACCTGCAGCAA 214
consensus_10800#2      ------------------------------------------------------------
                                                                                   

consensus_10800#0      GACAGGTCATCTGGCACGTGATTGCCCAAGTTCAGGATCTAGTAAGCTATGCAACAAATG 840
consensus_10800#1      GACAGGTCATCTGGCACGTGATTGCCCAAGTTCAGGATCTAGTAAGCTATGCAACAAATG 274
consensus_10800#2      ----------------------------------------------------------TG 2
                                                                                 **

consensus_10800#0      TTTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCG 900
consensus_10800#1      TTT-AAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCG 333
consensus_10800#2      TTTTAAGCCAGGCCACATTGCTGTTGACTGCACCAACGAGCGGGCTTGCAACAACTGTCG 62
                       *** ********************************************************

consensus_10800#0      TCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGT 960
consensus_10800#1      TCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGT 393
consensus_10800#2      TCAGCCTGGGCACATAGCTCGGGAGTGCACGAACGAGCCTGTTTGCAACCTGTGCAATGT 122
                       ************************************************************

consensus_10800#0      CTCTGGGCATCTTGCTCGGAACTGTCAAAAAACGACCATTTCTTCAGAGATACAGGGCGG 1020
consensus_10800#1      CTCTGGGCATCTTGCTCGGAACTGTCGAAAAACGACCATTTCTTCAGAGATACAGGGTGG 453
consensus_10800#2      CTCTGGGCATCTTGCTCGGAACTGTCAAAAAACGACCATTTCTTCAGAGATACAGGGCGG 182
                       ************************** ****************************** **

consensus_10800#0      CCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGCAACTG 1080
consensus_10800#1      CCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGCAACTG 513
consensus_10800#2      CCCTTTCCGTGACATTACCTGCCGCTTGTGTGGCAAGCCAGGGCACATCAGCCGCAACTG 242
                       ************************************************************

consensus_10800#0      CATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCC 1140
consensus_10800#1      CATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCC 573
consensus_10800#2      CATGACAACCATGATCTGTGGCACCTGCGGTGGGAGGGGTCATATGTCATATGAGTGCCC 302
                       ************************************************************

consensus_10800#0      ATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCAC 1200
consensus_10800#1      ATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCAC 633
consensus_10800#2      ATCTGCAAGGATGTTTGATCGTGGGCTCCGCAGGTTCTGATGACAGCCATCCATACGCAC 362
                       ************************************************************

consensus_10800#0      TGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCATTGATTCTGCTTAGATAGCTTGCT 1260
consensus_10800#1      TGCTGGTTTTGATGCTCGGAATTTCGCATTGTTCCATTGATTCTGCTTAGATAGCTTGCT 693
consensus_10800#2      TGCTGGTTCTGATGCTCGGAATTTCGCATTGTTCCATTGATTCTGCTTAGATAGCTTGCT 422
                       ******** ***************************************************

consensus_10800#0      TGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTTGAGGAATGATTCT 1320
consensus_10800#1      TGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTTGAGGAATGATTCT 753
consensus_10800#2      TGACTATACCGAAACGGTTCTTTTATACCTTTTGCTCTCTGGGAGTTGAGGAATGATTCT 482
                       ************************************************************

consensus_10800#0      GTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTG 1380
consensus_10800#1      GTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTG 813
consensus_10800#2      GTAGGATGTATTTGGGTGAAACTTTTGCTTGTGTTAATCAGGGTGTTGTAGCCTTTCGTG 542
                       ************************************************************

consensus_10800#0      GGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACT-GCTTTGGTAGAC 1439
consensus_10800#1      GGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAAAAACT-GCTTTGGTAGAC 872
consensus_10800#2      GGGGAACAAAATGATGTATCTTCCCAAGAGAGACATCCAGAGAGGGGAGGGGAGGGAGGC 602
                       ***************************************** *     *    ** ** *

consensus_10800#0      CAG-GCCATATCA--AGTATTGTGCATGACTGTTTGAGCTATTT-GACTCCTCCAAGCTT 1495
consensus_10800#1      CAG-GCCATATCA--AGTATTGTGCATGACTGTTTGAGCTAAAA-AAAAAAAAAAA---- 924
consensus_10800#2      CGACGCGGTGGCGCCGGGGAGGAGGACGCCCGGCGGCGAGGCGGCGGCGCTATCGAGCCG 662
                       *   **  *  *    *    * * * * * *   * *                 *    

consensus_10800#0      GCTCCTCCCCACTGACTGTTGCGTCGAGTTGTCCTCATTGTTCTGTATTCTCATATTATC 1555
consensus_10800#1      ------------------------------------------------------------
consensus_10800#2      CGGTCATGCGGCGGGTGACCGCGTGAGATTGCGAGGTGACTGGCGTCTGCTGCTGCTGCT 722
                                                                                   

consensus_10800#0      TTCCTGGAAGAAAAGTTGACGAGTGAGATCAGGATAATCATTAAAAGGA 1604
consensus_10800#1      -------------------------------------------------
consensus_10800#2      GCTGGGGTG---------------------------------------- 731
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)