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Oryza sativa
cluster # 10808 cluster # 10808       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10808#0 length = 2086 sequences # 4  
consensus_10808#1 length = 810 sequences # 3  
consensus_10808#2 length = 154 sequences # 1  

consensusID : consensus_10808#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2086
fasta sequence
                              [GGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGCGGAGGAGAGAGGCGGCTCGCCGGCTCGAGCTCGACTGCTCCCCACTCGCGGCCGGGAGGGAGGGAGGGGGAGAGAAAGGAGAGAGGTGATTCGATGGAGGCGAAGGGGGAGAATGACGCGCGGGCGCCGCTCCTGGCGGAGCGGCGGCGCAACTCGGTCGGGTCGATGCGCGGGGAGTTCGTGTCGCGGCTGCCCAAGAAGGTGCTCGACGCCGTCGACCCCGAGAGGCCGTCCCACGTCGACTTCTCCCGCTCCAAGGGCCTCCGCGAAGGAGAGAAAGAATACTATGAGAAACAATTTGCCACCTTGAGATCCTTTGAGGAAGTTGATTCAATAGAAGAATCCAATGTAATGAGTGAAGAAGATGATATTGCGGAGCAAAAGCAGAGTGAGTTTGCCATGAAGATATCAAACTATGCAAACATGATTCTTTTGGCGTTGAAGATATATGCTACAATTAAAAGTGGATCAATTGCTATAGCTGCCTCGACATTGGACTCGCTGCTTGATCTCATGGCTGGTGGTATCCTTTGGTTCACACATCTCTCGATGAAGAGCATCAACGTCTACAAGTATCCTATTGGTAAACTGAGGGTGCAGCCTGTTGGAATCATCATCTTTGCTGCTGTAATGGCTACATTAGGATTCCAAGTATTTGTTCAAGCTGTGGAAAAGCTGATAGTGAACGAGACTCCAGATAAATTGACTCCAGTGCAGCTCACATGGCTATATTCTATCATGATTTTTGCAACAGTAGTTAAGCTAGCCCTCTGGCTCTACTGCAGAACATCTGGTAACAAGATAGTCCGTGCCTATGCTAAGGATCATTATTTTGACGTCGTCACGAATGTTGTGGGTTTGGCTGCTGCTGTCCTTGGTGATATGTTCTACTGGTGGATTGACCCAGTTGGTGCAATTGCCCTTGCAGTGTACACAATTACAAACTGGTCTGGAACGGTGTGGGAAAATGCAGTGTCACTAGTGGGTGAATCAGCTCCGCCAGAAATGCTGCAGAAGTTGACATATTTGGCCATCAGACATCATCCTCAAATCAAGCGTGTCGATACAGTTCGAGCATACACCTTTGGGGTTCTTTACTTTGTTGAGGTTGACA-TTGAGCTGCCAGAGGAATTGCCCCTTAAGGAGGCACATGCTATTGGAGAATCACTTC-AAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCGAGTGTGACCA-CAAGCCAGAGCACAAC-ATTCTC-AGCAAGTTGCCTAGCAGCCAACC-ATGACCACCAACTTGAATTCCACCGTGAAACGAATTAGCTGGCTTGTTCGCTTG-CCATGCAGGATGTGCTACAGTACGTGCCGCATTATGCTATATGAAACGGCTGAAGACAAATGAGATTGTCTGGCCATCATTTCTGAAAGTAGGCCTAAGAGAATACTGTATTAGTTAAG-TACCTATATTAGAGATTATGTGGACTGAACTTGTGCATCCCTCTGTTTAAGAGTTTTGTTGTGAGGAAAGTTC-AGCACAAAGGGGAAATCACGTTCTGGATGATCTCAAGCAATTTTTTTGTTCTGAAATTCAGGTCAGTTGTAAATATTGTCTGGTTTGCTTAACAATGGTGTGTAAGTGCCCTACATTGCTGGGAAGGTCAAGGTGTATGTGCTAAAAGAAACTCATTTTAACAAATGTGGTTTTGCCTTTTTCAGCCCAACATCAGGCCCAGCACTCCTTCCAAATTG-AGAAAGGAAAACAGAACTGGCCCAGTAGGTGTAAACTGGATGCAAAGCAATGCACCCGGCAAACATCCAGCAAACAACAAGCAGTAAAAATTTACAACGTAAAGCCTCTTCGATAGACCGGATATTTTCATTTATTGAATTTGAAATTCTTTTGAAATTTCTTCACAGTGCAAGTACTTCTATTAGGATTGTAGGATGATTCTTCTGCAGTTGTACCCTTTGTCACTAGTGGTTGTACCATTGCAGTCCGTAGTACGGCCGTGGGACTGTCTGTAAGCCACGCATTATTGGCTGAAATGCTGAATTT]

[+] EMBL AK065961             [GGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGCGGAGGAGAGAGGCGGCTCGCCGGCTCGAGCTCGACTGCTCCCCACTCGCGGCCGGGAGGGAGGGAGGGGGAGAGAAAGGAGAGAGGTGATTCGATGGAGGCGAAGGGGGAGAATGACGCGCGGGCGCCGCTCCTGGCGGAGCGGCGGCGCAACTCGGTCGGGTCGATGCGCGGGGAGTTCGTGTCGCGGCTGCCCAAGAAGGTGCTCGACGCCGTCGACCCCGAGAGGCCGTCCCACGTCGACTTCTCCCGCTCCAAGGGCCTCCGCGAAGGAGAGAAAGAATACTATGAGAAACAATTTGCCACCTTGAGATCCTTTGAGGAAGTTGATTCAATAGAAGAATCCAATGTAATGAGTGAAGAAGATGATATTGCGGAGCAAAAGCAGAGTGAGTTTGCCATGAAGATATCAAACTATGCAAACATGATTCTTTTGGCGTTGAAGATATATGCTACAATTAAAAGTGGATCAATTGCTATAGCTGCCTCGACATTGGACTCGCTGCTTGATCTCATGGCTGGTGGTATCCTTTGGTTCACACATCTCTCGATGAAGAGCATCAACGTCTACAAGTATCCTATTGGTAAACTGAGGGTGCAGCCTGTTGGAATCATCATCTTTGCTGCTGTAATGGCTACATTAGGATTCCAAGTATTTGTTCAAGCTGTGGAAAAGCTGATAGTGAACGAGACTCCAGATAAATTGACTCCAGTGCAGCTCACATGGCTATATTCTATCATGATTTTTGCAACAGTAGTTAAGCTAGCCCTCTGGCTCTACTGCAGAACATCTGGTAACAAGATAGTCCGTGCCTATGCTAAGGATCATTATTTTGACGTCGTCACGAATGTTGTGGGTTTGGCTGCTGCTGTCCTTGGTGATATGTTCTACTGGTGGATTGACCCAGTTGGTGCAATTGCCCTTGCAGTGTACACAATTACAAACTGGTCTGGAACGGTGTGGGAAAATGCAGTGTCACTAGTGGGTGAATCAGCTCCGCCAGAAATGCTGCAGAAGTTGACATATTTGGCCATCAGACATCATCCTCAAATCAAGCGTGTCGATACAGTTCGAGCATACACCTTTGGGGTTCTTTACTTTGTTGAGGTTGACA TTGAGCTGCCAGAGGAATTGCCCCTTAAGGAGGCACATGCTATTGGAGAATCACTTC AAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCGAGTGTGACCA CAAGCCAGAGCACAAC ATTCTC AGCAAGTTGCCTAGCAGCCAACC ATGACCACCAACTTGAATTCCACCGTGAAACGAATTAGCTGGCTTGTTCGCTTG CCATGCAGGATGTGCTACAGTACGTGCCGCATTATGCTATATGAAACGGCTGAAGACAAATGAGATTGTCTGGCCATCATTTCTGAAAGTAGGCCTAAGAGAATACTGTATTAGTTAAG TACCTATATTAGAGATTATGTGGACTGAACTTGTGCATCCCTCTGTTTAAGAGTTTTGTTGTGAGGAAAGTTC AGCACAAAGGGGAAATCACGTTCTGGATGATCTCAAGCAATTTTTTTGTTCTGAAATTCAGGTCAGTTGTAAATATTGTCTGGTTTGCTTAACAATGGTGTGTAAGTGCCCTACATTGCTGGGAAGGTCAAGGTGTATGTGCTAAAAGAAACTCATTTTAACAAATGTGGTTTTGCCTTTTTCAGCCCAACATCAGGCCCAGCACTCCTTCCAAATTG AGAAAGGAAAACAGAACTGGCCCAGTAGGTGTAAACTGGATGCAAAGCAATGCACCCGGCAAACATCCAGCAAACAACAAGCAGTAAAAATTTACAACGTAAAGCCTCTTCGATAGACCGGATATTTTCATTTATTGAATTTGAAATTCTTTTGAAATTTCTTCACAGTGCAAGTACTTCTATTAGGATTGTAGGATGATTCTTCTGCAGTTGTACCCTTTGTCACTAGTGGTTGTACCATTGCAGTCCGTAGTACGGCCGTGGGACTGTCTGTAAGCCACGCATTATTGGCTGAAATGCTGAATTT]
[+] EMBL AK070223             [                                               CTCGCCGGCTCGAGCTCGACTGCTCCCCACTCGCGGCCGGGAGGGAGGGAGGGGGAGAGAAAGGAGAGAGGTGATTCGATGGAGGCGAAGGGGGAGAATGACGCGCGGGCGCCGCTCCTGGCGGAGCGGCGGCGCAACTCGGTCGGGTCGATGCGCGGGGAGTTCGTGTCGCGGCTGCCCAAGAAGGTGCTCGACGCCGTCGACCCCGAGAGGCCGTCCCACGTCGACTTCTCCCGCTCCAAGGGCCTCCGCGAAGGAGAGAAAGAATACTATGAGAAACAATTTGCCACCTTGAGATCCTTTGAGGAAGTTGATTCAATAGAAGAATCCAATGTAATGAGTGAAGAAGATGATATTGCGGAGCAAAAGCAGAGTGAGTTTGCCATGAAGATATCAAACTATGCAAACATGATTCTTTTGGCGTTGAAGATATATGCTACAATTAAAAGTGGATCAATTGCTATAGCTGCCTCGACATTGGACTCGCTGCTTGATCTCATGGCTGGTGGTATCCTTTGGTTCACACATCTCTCGATGAAGAGCATCAACGTCTACAAGTATCCTATTGGTAAACTGAGGGTGCAGCCTGTTGGAATCATCATCTTTGCTGCTGTAATGGCTACATTAGGGTTCCAAGTATTTGTTCAAGCTGTGGAAAAGCTGATAGTGAACGAGACTCCAGATAAATTGACTCCAGTGCAGCTCACATGGCTATATTCTATCATGATTTTTGCAACAGTAGTTAAGCTAGCCCTCTGGCTCTACTGCAGAACATCTGGTAACAAGATAGTCCGTGCCTATGCTAAGGATCATTATTTTGACGTCGTCACGAATGTTGTGGGTTTGGCTGCTGCTGTCCTTGGTGATATGTTCTACTGGTGGATTGACCCAGTTGGTGCAATTGCCCTTGCAGTGTACACAATTACAAACTGGTCTGGAACGGTGTGGGAAAATGCAGTGTCACTAGTGGGTGAATCAGCTCCGCCAGAAATGCTGCAGAAGTTGACATATTTGGCCATCAGACATCATCCTCAAATCAAGCGTGTCGATACAGTTCGAGCATACACCTTTGGGGTTCTTTACTTTGTTGAGGTTGACA TTGAGCTGCCAGAGGAATTGCCCCTTAAGGAGGCACATGCTATTGGAGAATCACTTC AAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCGAGTGTGACCA CAAGCCAGAGCACAAC ATTCTC AGCAAGTTGCCTAGCAGCCAACC ATGACCACCAACTTGAATTCCACCGTGAAACGAATTAGCTGGCTTGTTCGCTTG CCATGCAGGATGTGCTACAGTACGTGCCGCATTATGCTATATGAAACGGCTGAAGACAAATGAGATTGTCTGGCCATCATTTCTGAAAGTAGGCCTAAGAGAATACTGTATTAGTTAAG TGCCTATATTAGAGATTATGTGGACTGAACTTGTGCATCCCTCTGTTTAAGAGTTTTGTTGTGAGGAAAGTTC AGCACAAAGGGGAAATCACGTTCTGGATGATCTCAAGCAATTTTTTTGTTCTGAAATTCAGGTCAGTTGTAAATATTGTCTGGTTTGCTTAACAATGGTGTGTAAGTGCCCTACATTGCTGGGAAGGTCAAGGTGTATGTGCTAAAAGA                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM038150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCACTAGTGGGTGAATCAGCTCC CCAGAAATGCTCAAGAAGTTGACATATTT GCCATCAGACATCATCCTCAAATCAAGCGTGTCGATACAGTTCGAGCATACACCTTTGGGGTTCTTTACTTTGTTGAGGTTGACACTTGAGCTGCCAGAGGAATTGCCCCTTAAGGAGGCACATGCTATTGGAGAATCACTTCAAAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCGAGTGTGACCACCAAGCCAGAGCACAACAATTCTCAAGCAAGTTGCCTAGCAGCCAACCAATGACCACCAACTTGAATTCCCCCNTGAAACGAATTAGCTGGCTTGTTCGCTTGCCCATGCAGGATGTG TACAGTACGT CCGCATTATGCTATATGAAACGGCTGAAGACAAATGAGATTGTCTGGCCATCATTTCTGAAAGTAGGCCTAAGAGAATACTGTATTAGTTAAG TACCTATATTAGAGATTATGTGGACTGAAaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BI806755             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TAGTTAAGNTACCTATATTAGAGATTATGTGGACTGAACTTGTGCATCCCTCTGTTTAAGAGTTTTGTTGTGAGGAAAGTTCTAGCAC AAGGGGAAATCACGTTCTGGATGATCTCAAGCCATNTTTTTGTTCTGAAATTCAGGTCAGTTGTAAATATTGTCTGGTTTGCTTAACAATGGTGTGTAAGTGCCCTACATTGCTGGGAAGGTCAAGGTGTATGTGCTAAAAGAAACTCATTTTAACAAATGTGGTTTTGCCTTTTTCAGCCCAACATCAGGCCCAGCACTCTTTCCAAATTGTAGAAAGGAAAACAGAACTGGCCCAGTAGGTGTAAACTGGATGC AAGC ATGCACCCGGC AACATCCAGC AAC ACAAGCAGT AAAATTTAC ACGT AAGCCTCTTCGATAGACCGGATATTTTCATTTATTGAATTTGAAATTCTTTTGAAAaaaaaaa                                                                                                                                               ]


>consensus_10808#0 GGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGCGGAGGAGAGAGGCGGCTCGCCGGCTCGA GCTCGACTGCTCCCCACTCGCGGCCGGGAGGGAGGGAGGGGGAGAGAAAGGAGAGAGGTG ATTCGATGGAGGCGAAGGGGGAGAATGACGCGCGGGCGCCGCTCCTGGCGGAGCGGCGGC GCAACTCGGTCGGGTCGATGCGCGGGGAGTTCGTGTCGCGGCTGCCCAAGAAGGTGCTCG ACGCCGTCGACCCCGAGAGGCCGTCCCACGTCGACTTCTCCCGCTCCAAGGGCCTCCGCG AAGGAGAGAAAGAATACTATGAGAAACAATTTGCCACCTTGAGATCCTTTGAGGAAGTTG ATTCAATAGAAGAATCCAATGTAATGAGTGAAGAAGATGATATTGCGGAGCAAAAGCAGA GTGAGTTTGCCATGAAGATATCAAACTATGCAAACATGATTCTTTTGGCGTTGAAGATAT ATGCTACAATTAAAAGTGGATCAATTGCTATAGCTGCCTCGACATTGGACTCGCTGCTTG ATCTCATGGCTGGTGGTATCCTTTGGTTCACACATCTCTCGATGAAGAGCATCAACGTCT ACAAGTATCCTATTGGTAAACTGAGGGTGCAGCCTGTTGGAATCATCATCTTTGCTGCTG TAATGGCTACATTAGGATTCCAAGTATTTGTTCAAGCTGTGGAAAAGCTGATAGTGAACG AGACTCCAGATAAATTGACTCCAGTGCAGCTCACATGGCTATATTCTATCATGATTTTTG CAACAGTAGTTAAGCTAGCCCTCTGGCTCTACTGCAGAACATCTGGTAACAAGATAGTCC GTGCCTATGCTAAGGATCATTATTTTGACGTCGTCACGAATGTTGTGGGTTTGGCTGCTG CTGTCCTTGGTGATATGTTCTACTGGTGGATTGACCCAGTTGGTGCAATTGCCCTTGCAG TGTACACAATTACAAACTGGTCTGGAACGGTGTGGGAAAATGCAGTGTCACTAGTGGGTG AATCAGCTCCGCCAGAAATGCTGCAGAAGTTGACATATTTGGCCATCAGACATCATCCTC AAATCAAGCGTGTCGATACAGTTCGAGCATACACCTTTGGGGTTCTTTACTTTGTTGAGG TTGACATTGAGCTGCCAGAGGAATTGCCCCTTAAGGAGGCACATGCTATTGGAGAATCAC TTCAAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCG AGTGTGACCACAAGCCAGAGCACAACATTCTCAGCAAGTTGCCTAGCAGCCAACCATGAC CACCAACTTGAATTCCACCGTGAAACGAATTAGCTGGCTTGTTCGCTTGCCATGCAGGAT GTGCTACAGTACGTGCCGCATTATGCTATATGAAACGGCTGAAGACAAATGAGATTGTCT GGCCATCATTTCTGAAAGTAGGCCTAAGAGAATACTGTATTAGTTAAGTACCTATATTAG AGATTATGTGGACTGAACTTGTGCATCCCTCTGTTTAAGAGTTTTGTTGTGAGGAAAGTT CAGCACAAAGGGGAAATCACGTTCTGGATGATCTCAAGCAATTTTTTTGTTCTGAAATTC AGGTCAGTTGTAAATATTGTCTGGTTTGCTTAACAATGGTGTGTAAGTGCCCTACATTGC TGGGAAGGTCAAGGTGTATGTGCTAAAAGAAACTCATTTTAACAAATGTGGTTTTGCCTT TTTCAGCCCAACATCAGGCCCAGCACTCCTTCCAAATTGAGAAAGGAAAACAGAACTGGC CCAGTAGGTGTAAACTGGATGCAAAGCAATGCACCCGGCAAACATCCAGCAAACAACAAG CAGTAAAAATTTACAACGTAAAGCCTCTTCGATAGACCGGATATTTTCATTTATTGAATT TGAAATTCTTTTGAAATTTCTTCACAGTGCAAGTACTTCTATTAGGATTGTAGGATGATT CTTCTGCAGTTGTACCCTTTGTCACTAGTGGTTGTACCATTGCAGTCCGTAGTACGGCCG TGGGACTGTCTGTAAGCCACGCATTATTGGCTGAAATGCTGAATTT



consensusID : consensus_10808#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 810
fasta sequence
                              [GCACAATTCCTTATGTGTTCTGAAAGTTACTTACTAGATTAACTGGCAGATAGTCGTATACTGAATTAATGATGCTTATTGCTATCCTTGATGCAGTGTCACTAGTGGGTGAATCAGCTCCGCCAGAAATGCTGCAGAAGTTGACATATTTGGCCATCAGACATCATCCTCAAATCAAGCGTGTCGATACAGTTCGAGCATACACCTTTGGGGTTCTTTACTTTGTTGAGGTTGGTACCTCAGTTTTTCTGTTGCCTTGCTGTTTTTTTCCCTTTTAGGTAAATATATATGCTCTTCCCAGCTAATTTGATCAACGGACTGGCAGGTTGACATTGAGCTGCCAGAGGAATTGCCCCTTAAGGAGGCACATGCTATTGGAGAATCACTTCAAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCGAGTGTGACCACAAGCCAGAGCACAACATTCTCAGCAAGTTGCCTAGCAGCCAACCATGACCACCAACTTGAATTCCACCGTGAAACGAATTAGCTGGCTTGTTCGCTTGCCATGCAGGATGTGCTACAGTACGTGCCGCATTATGCTATATGAAACGGCTGAAGACAAATGAGATTGTCTGGCCATCATTTCTGAAAGTAGGCCTAAGAGAATACTGTATTAGTTAAGTACCTATATTAGAGATTATGTGGACTGAACTTGTGCATCCCTCTGTTTAAGAGTTTTGTTGTGAGGAAAGTTCAGCACAAAGGGGAAATCACGTTCTGGATGATCTCAAGCAATTTTTTTGTTCTGAATAAAAGGA]

[+] EMBL CB679414             [GCACAATTCCTTATGTGTTCTGAAAGTTACTTACTAGATTAACTGGCAGATAGTCGTATACTGAATTAATGATGCTTATTGCTATCCTTGATGCAGTGTCACTAGTGGGTGAATCAGCTCCGCCAGAAATGCTGCAGAAGTTGACATATTTGGCCATCAGACATCATCCTCAAATCAAGCGTGTCGATACAGTTCGAGCATACACCTTTGGGGTTCTTTACTTTGTTGAGGTTGGTACCTCAGTTTTTCTGTTGCCTTGCTGTTTTTTTCCCTTTTAGGTAAATATATATGCTCTTCCCAGCTAATTTGATCAACGGACTGGCAGGTTGACATTGAGCTGCCAGAGGAATTGCCCCTTAAGGAGGCACATGCTATTGGAGAATCACTTCAAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCGAGTGTGACCACAAGCCAGAGCACAACATTCTCAACAAGTTGCCTAGCAGCCAACCATGACCACCAACTTGAATTCCACCGTGAAACGAATTAGCTGGCTTGTTCGCTTGCCATGCACGATGTGCTACAGTACGTGCCGCATTATGCTATATGAAACGGCTGAAGACAAATGAGATTGTCTGGCCATCATTTCTGAAAGTAGGCCTAAGAGAATACTGTATTAGTTAAGTACCTATATTAGAGATTATGTGGACTGAACTTGTGCATCCCTCTGTTTAAGAGTTTTGTTGTGAGGAAAGTTCAGCACAAAGGGGAAATCACGT                                          ]
[-] EMBL CB679415             [                                                        TATACTGAATTAATGATGCTTATTGCTATCCTGNATGCAGTGTCACTAGTGGGTGAATCAGCTCCGCCAGAAATGCTGCAGAAGTTGACATATTTGGCCATCAGACATCATCCTCAAATCAAGCGTGTCGATACAGTTCGAGCATACACCTTTGGGGTTCTTTACTTTGTTGAGGTTGGTACCTCAGTTTTTCTGTTGCCTTGCTGTTTTTTTCCCTTTTAGGTAAATATATATGCTCTTCCCAGCTAATTTGATCAACGGACTGGCAGGTTGACATTGAGCTGCCAGAGGAATTGCCCCTTAAGGAGGCACATGCTATTGGAGAATCACTTCAAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCGAGTGTGACCACAAGCCAGAGCACAACATTCTCAGCAAGTTGCCTAGCAGCCAACCATGACCACCAACTTGAATTCCACCGTGAAACGAATTAGCTGGCTTGTTCGCTTGCCATGCAGGATGTGCTACAGTACGTGCCGCATTATGCTATATGAAACGGCTGAAGACAAATGAGATTGTCTGGCCATCATTTCTGAAAGTAGGCCTAAGAGAATACTGTATTAGTTAAGTACCTATATTAGAGATTATGTGGACTGAACTTGTGCATCCCTCTGTTTAAGAGTTTTGTTGTGAGGAAAGTTCAGCACAAAGGGGAAATCACGTTCTGGATGATCTCAAGCAATTTTTTTGTTCTGAATAAAAGGA]
[-] EMBL CB679413             [                                                                                                                                                                             ATCAAGAGCGTCGATACAGTTCGAGCATACACCTTCGGGGTTCTTTACTTTGCTGAGGATGGTACCTCAGTTTTTCTGTTGCCTTGGTGTTTTTTTCCCTTTTAGGTAAATATATATGCTCTTCCCAGCTAATTTGATCAACGGACTGGCAGGTTGACATTGAGCTGCCAGAGGAATTGCCCCTTTAGGAGGCACATGCTATTGGAGAATCACTTCAAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCGAGTGTGCCCTCAAGCCAGAGCACAACATTGTCAGCAAGTTGCTTAGCACCCAACCATGACCACCACCTTGAATTCCCCCGTGAAACGAATTAGCTGGCTTGTTCGCTTGCCATGCAGGATGTGTTACAGTTCGTGCCGCATTATGCTATATGAAACGGCGGAAGACTAATGAGATTGTCTGGCCATCATTTCTGAAAGTAGGCCTAAGAGAATTCCGTATTAGTTAAGTCCCTATATTAGAGATTACGTGGAGCGACCTTGTGCATCCCTCTGTTTAAGAGTCTTGTTGTGAGGAAAGTTCAGCACAAAGGGGAAATCACGTTGTGGATGATCTCAAGt                         ]


>consensus_10808#1 GCACAATTCCTTATGTGTTCTGAAAGTTACTTACTAGATTAACTGGCAGATAGTCGTATA CTGAATTAATGATGCTTATTGCTATCCTTGATGCAGTGTCACTAGTGGGTGAATCAGCTC CGCCAGAAATGCTGCAGAAGTTGACATATTTGGCCATCAGACATCATCCTCAAATCAAGC GTGTCGATACAGTTCGAGCATACACCTTTGGGGTTCTTTACTTTGTTGAGGTTGGTACCT CAGTTTTTCTGTTGCCTTGCTGTTTTTTTCCCTTTTAGGTAAATATATATGCTCTTCCCA GCTAATTTGATCAACGGACTGGCAGGTTGACATTGAGCTGCCAGAGGAATTGCCCCTTAA GGAGGCACATGCTATTGGAGAATCACTTCAAATAAAGATCGAGGAGCTCCCAGAAGTCGA GCGGGCATTTGTTCACCTTGATTTCGAGTGTGACCACAAGCCAGAGCACAACATTCTCAG CAAGTTGCCTAGCAGCCAACCATGACCACCAACTTGAATTCCACCGTGAAACGAATTAGC TGGCTTGTTCGCTTGCCATGCAGGATGTGCTACAGTACGTGCCGCATTATGCTATATGAA ACGGCTGAAGACAAATGAGATTGTCTGGCCATCATTTCTGAAAGTAGGCCTAAGAGAATA CTGTATTAGTTAAGTACCTATATTAGAGATTATGTGGACTGAACTTGTGCATCCCTCTGT TTAAGAGTTTTGTTGTGAGGAAAGTTCAGCACAAAGGGGAAATCACGTTCTGGATGATCT CAAGCAATTTTTTTGTTCTGAATAAAAGGA



consensusID : consensus_10808#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 154
fasta sequence
                              [TTTGTTGGTGGAGGAAAAGTGTCAAGCAACAAAGGGGGAATATCACGTGTCTGGATGATCTCAACAATTTTTTTGTTCTGAAATTCAGGTCAGTTGTAAATATTGTCTGGTTTGCTTAACAATGCCCTCTAAGTCCCTACATTGCTGGGAAAAA]

[+] EMBL BM420601             [TTTGTTGGTGGAGGAAAAGTGTCAAGCAACAAAGGGGGAATATCACGTGTCTGGATGATCTCAACAATTTTTTTGTTCTGAAATTCAGGTCAGTTGTAAATATTGTCTGGTTTGCTTAACAATGCCCTCTAAGTCCCTACATTGCTGGGAAAAA]


>consensus_10808#2 TTTGTTGGTGGAGGAAAAGTGTCAAGCAACAAAGGGGGAATATCACGTGTCTGGATGATC TCAACAATTTTTTTGTTCTGAAATTCAGGTCAGTTGTAAATATTGTCTGGTTTGCTTAAC AATGCCCTCTAAGTCCCTACATTGCTGGGAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10808#0      GGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGCGGAGGAGAGAGGCGGCTCGCCGGCTCGA 60
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      GCTCGACTGCTCCCCACTCGCGGCCGGGAGGGAGGGAGGGGGAGAGAAAGGAGAGAGGTG 120
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      ATTCGATGGAGGCGAAGGGGGAGAATGACGCGCGGGCGCCGCTCCTGGCGGAGCGGCGGC 180
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      GCAACTCGGTCGGGTCGATGCGCGGGGAGTTCGTGTCGCGGCTGCCCAAGAAGGTGCTCG 240
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      ACGCCGTCGACCCCGAGAGGCCGTCCCACGTCGACTTCTCCCGCTCCAAGGGCCTCCGCG 300
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      AAGGAGAGAAAGAATACTATGAGAAACAATTTGCCACCTTGAGATCCTTTGAGGAAGTTG 360
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      ATTCAATAGAAGAATCCAATGTAATGAGTGAAGAAGATGATATTGCGGAGCAAAAGCAGA 420
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      GTGAGTTTGCCATGAAGATATCAAACTATGCAAACATGATTCTTTTGGCGTTGAAGATAT 480
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      ATGCTACAATTAAAAGTGGATCAATTGCTATAGCTGCCTCGACATTGGACTCGCTGCTTG 540
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      ATCTCATGGCTGGTGGTATCCTTTGGTTCACACATCTCTCGATGAAGAGCATCAACGTCT 600
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      ACAAGTATCCTATTGGTAAACTGAGGGTGCAGCCTGTTGGAATCATCATCTTTGCTGCTG 660
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      TAATGGCTACATTAGGATTCCAAGTATTTGTTCAAGCTGTGGAAAAGCTGATAGTGAACG 720
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      AGACTCCAGATAAATTGACTCCAGTGCAGCTCACATGGCTATATTCTATCATGATTTTTG 780
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      CAACAGTAGTTAAGCTAGCCCTCTGGCTCTACTGCAGAACATCTGGTAACAAGATAGTCC 840
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      GTGCCTATGCTAAGGATCATTATTTTGACGTCGTCACGAATGTTGTGGGTTTGGCTGCTG 900
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      CTGTCCTTGGTGATATGTTCTACTGGTGGATTGACCCAGTTGGTGCAATTGCCCTTGCAG 960
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      TGTACACAATTACAAACTGGTCTGGAACGGTGTGGGAAAATGCAGTGTCACTAGTGGGTG 1020
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      AATCAGCTCCGCCAGAAATGCTGCAGAAGTTGACATATTTGGCCATCAGACATCATCCTC 1080
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      AAATCAAGCGTGTCGATACAGTTCGAGCATACACCTTTGGGGTTCTTTACTTTGTTGAGG 1140
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   

consensus_10808#0      TTGACATTGAGCTGCCAGAGGAATTGCCCCTTAAGGAGGCACATGCTATTGGAGAATCAC 1200
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      --------------------------------GCACAATTCCTTATGTGTTCTGAAAGTT 28
                                                                                   

consensus_10808#0      TTCAAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCG 1260
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ACTTACTAGATTAACTGGCAGATAGTCGTATACTGAATTAATGATGCTTATTGCTATCCT 88
                                                                                   

consensus_10808#0      AGTGTGACCACAAGCCAGAGCACAACATTCTCAGCAAGTTGCCTAGCAGCCAACCATGAC 1320
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      TGATGCAGTGTCACTAGTGGGTGAATCAGCTCCGCCAGAAATGCTGCAGAAGTTGACATA 148
                                                                                   

consensus_10808#0      CACCAACTTGAATTCCACCGTGAAACGAATTAGCTGGCTTGTTCGCTTGCCATGCAGGAT 1380
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      TTTGGCCATCAGACATCATCCTCAAATCAAGCGTGTCGATACAGTTCGAGCATACACCTT 208
                                                                                   

consensus_10808#0      GTGCTACAGTACGTGCCGCATTATGCTATATGAAACGGCTGAAGACAAATGAGATTGTCT 1440
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      TGGGGTTCTTTACTTTGTTGAGGTTGGTACCTCAGTTTTTCTGTTGCCTTGCTGTTTTTT 268
                                                                                   

consensus_10808#0      GGCCATCATTTCTGAAAGTAGGCCTAAGAGAATACTGTATTAGTTAAGTACCTATATTAG 1500
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      TCCCTTTTAGGTAAATATATATGCTCTTCCCAGCTAATTTGATCAACGGACTGGCAGGTT 328
                                                                                   

consensus_10808#0      AGATTATGTGGACTGAACTTGTGCATCCCTCTGTTTAAGAGTTTTGTTGTGAGGAAAGTT 1560
consensus_10808#2      ---------------------------------------TTTGTTGGTGGAGGAAAAGTG 21
consensus_10808#1      GACATTGAGCTGCCAGAGGAATTGCCCCTTAAGGAGGCACATGCTATTGGAGAATCACTT 388
                                                                *  *  **       * * 

consensus_10808#0      -----CAGCACAAAGGGGAAATCACGT-TCTGGATGATCTCAAGCAATTTT---TTTGTT 1611
consensus_10808#2      TCAAGCAACAAAGGGGGAATATCACGTGTCTGGATGATCTCAA-CAATTTT---TTTGTT 77
consensus_10808#1      CAAATAAAGATCGAGGAGCTCCCAGAAGTCGAGCGGGCATTTGTTCACCTTGATTTCGAG 448
                             *  *    **      **    **  *  *   *      *  **   ** *  

consensus_10808#0      CTGAAATTCAGGTCAGTTGTAAATATTGTCTG--GTTTGCTTAACAATGGTGTGTAAGTG 1669
consensus_10808#2      CTGAAATTCAGGTCAGTTGTAAATATTGTCTG--GTTTGCTTAACAATGCCCTCTAAGT- 134
consensus_10808#1      TGTGACCACAAGCCAGAGCACAACATTCTCAGCAAGTTGCCTAGCAGCCAACCATGACCA 508
                           *   ** * ***     ** *** ** *    **** ** **        * *   

consensus_10808#0      CC---CTACATTGCTGGGAAGGTCAAGGTGTATGTGCTAAAAGAAACTCATTTTAACAAA 1726
consensus_10808#2      CC---CTACATTGCTGGGAAAAA------------------------------------- 154
consensus_10808#1      CCAACTTGAATTCCACCGTGAAACGAATTAGCTGGCTTGTTCGCTTGCCATGCAGGATGT 568
                       **    *  *** *   *                                          

consensus_10808#0      TGTGGTTTTGCCTTTTTCAGCCCAACATCAGGCCCAGCACTCCTTCCAAATTGAGAAAGG 1786
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      GCTACAGTACGTGCCGCATTATGCTATATGAAACGGCTGAAGACAAATGAGATTGTCTGG 628
                                                                                   

consensus_10808#0      AAAACAGAACTGGCCCAGTAGGTGTAAACTGGATGCAAAGCAATGCACCCGGCAAACATC 1846
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      CCATCATTTCTGAAAGTAGGCCTAAGAGAATACTGTATTAGTTAAGTACCTATATTAGAG 688
                                                                                   

consensus_10808#0      CAGCAAACAACAAGCAGTAAAAATTTACAACGTAAAGCCTCTTCGATAGACCGGATATTT 1906
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ATTATGTGGACTGAACTTGTGCATCCCTCTGTTTAAGAGTTTTGTTGTGAGGAAAGTTCA 748
                                                                                   

consensus_10808#0      TCATTTATTGAATTTGAAATTCTTTTGAAATTTCTTCACAGTGCAAGTACTTCTATTAGG 1966
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      GCACAAAGGGGAAATCACGTTCTGGATGATCTCAAGCAATTTTTTTGTTCTGAATAAAAG 808
                                                                                   

consensus_10808#0      ATTGTAGGATGATTCTTCTGCAGTTGTACCCTTTGTCACTAGTGGTTGTACCATTGCAGT 2026
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      GA---------------------------------------------------------- 810
                                                                                   

consensus_10808#0      CCGTAGTACGGCCGTGGGACTGTCTGTAAGCCACGCATTATTGGCTGAAATGCTGAATTT 2086
consensus_10808#2      ------------------------------------------------------------
consensus_10808#1      ------------------------------------------------------------
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)