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Oryza sativa
cluster # 10809 cluster # 10809       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10809#0 length = 1149 sequences # 6  
consensus_10809#1 length = 1139 sequences # 1  
consensus_10809#2 length = 388 sequences # 1  

consensusID : consensus_10809#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1149
fasta sequence
                              [TCGACGGTGCGGCTCGGGCGTTGTGAGCGCGGACTCGTCGGCGCCAGGTCCGGCGGAATTCCTCTCGTGGGCGTCCCATCCGCGCCGGCGGGGCTCAGGCGGGAGCCGGATCTGGTGGCTGCGCCGCCGCCATCCCCGCTGCTGCTGCCCTTTGCTCTAGGCTTCGTCCAAGGGAGAGGCAGGGGCACGAGGGGAGCGGCGCTCGCTTCCCCTTCCCGTCCGAGCGCACGCAGCCGGAGCAGCGCTGCTAGCAAACTGCTTCGACCGCCTGATGGAGGAGGCGGAGGCAAGGCCCGCGCCGCCTGACCCCAACGACGCGAGGCAGCGGTTCTTGTTGGAGCTCGAGTTCATCCAGTGCCTCGCCAACCCTACCTAC-ATCCACTATCTAGCGCAGAACAGATACTTTGAGGATGAGGCGTTTATCGGTTATCTCAAGTATCTCAAGTATTGGCAGCGTCCGGAGTACATCAAGTACATAATGTATCCACACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAATGGCACATCCAGCAAGCAAGGAAGTTG-CTCATAGGCAG-CAATATTTCTTCTGGAAAAACTATAGGAACAATAGGCTAAAGCACATCTTACCCCGCCCTCCTCCTG-AACCAACTCCCACGCCAGCACCTGCACCAGCAGCGGTGCCCCCATCAGCAT-CAGTGCCGTCGACTGTGGTTCCACCTGTTGCTGCACCCCCATCAGCTTTGCTACCTATGT-CAGCAGCTGGTGCATCTGCCATGTCTCCTATG-CAGTTTGCAGGAACTCCTGGCACCAATATCCCAAAGAACGACATGAGAAATGT-CATGGGTGGACAGGGTGGTAGAAAGAGAAAGAT-AGGCTAGTGAAACTGTGGAAAATGCTGGTCAACTCAAGGACAACATTG-TG-CAAGGGAAGAGTAATCTTCAGATTTTTCTTTTCTCTGTAGGCCTTTATTTCAGACTCAGACAATTTAGAAGCTTAACAGTTATTTGTGCTGCTGGAGATGTAATTTAGATAACAATATGCCATGTACGCTTGGTCCTTGAATGATTGGCTCATTTATGTGGCCTTGTAGTTAGATAGTGTACTAATATTTTGTTCAGGCCTAGTTTAGTTCCAACTTTTAAAAAAA]

[+] EMBL AK107727             [TCGACGGTGCGGCTCGGGCGTTGTGAGCGCGGACTCGTCGGCGCCAGGTCCGGCGGAATTCCTCTCGTGGGCGTCCCATCCGCGCCGGCGGGGCTCAGGCGGGAGCCGGATCTGGTGGCTGCGCCGCCGCCATCCCCGCTGCTGCTGCCCTTTGCTCTAGGCTTCGTCCAAGGGAGAGGCAGGGGCACGAGGGGAGCGGCGCTCGCTTCCCCTTCCCGTCCGAGCGCACGCAGCCGGAGCAGCGCTGCTAGCAAACTGCTTCGACCGCCTGATGGAGGAGGCGGAGGCAAGGCCCGCGCCGCCTGACCCCAACGACGCGAGGCAGCGGTTCTTGTTGGAGCTCGAGTTCATCCAGTGCCTCGCCAACCCTACCTAC ATCCACTATCTAGCGCAGAACAGATACTTTGAGGATGAGGCGTTTATCGGTTATCTCAAGTATCTCAAGTATTGGCAGCGTCCGGAGTACATCAAGTACATAATGTATCCACACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAATGGCACATCCAGCAAGCAAGGAAGTTG CTCATAGGCAG CAATATTTCTTCTGGAAAAACTATAGGAACAATAGGCTAAAGCACATCTTACCCCGCCCTCCTCCTG AACCAACTCCCACGCCAGCACCTGCACCAGCAGCGGTGCCCCCATCAGCAT CAGTGCCGTCGACTGTGGTTCCACCTGTTGCTGCACCCCCATCAGCTTTGCTACCTATGT CAGCAGCTGGTGCATCTGCCATGTCTCCTATG CAGTTTGCAGGAACTCCTGGCACCAATATCCCAAAGAACGACATGAGAAATGT CATGGGTGGACAGGGTGGTAGAAAGAGAAAGAT AGGCTAGTGAAACTGTGGAAAATGCTGGTCAACTCAAGGACAACATTG TG CAAGGGAAGAGTAATCTTCAGATTTTTCTTTTCTCTGTAGGCCTTTATTTCAGACTCAGACAATTTAGAAGCTTAACAGTTATTTGTGCTGCTGGAGATGTAATTTAGATAACAATATGCCATGTACGCTTGGTCCTTGAATGATTGGCTCATTTATGTGGCCTTGTAGTTAGATAGTGTACTAATATTTT                                   ]
[+] EMBL C73780               [       TGCGGCTCGGGCGTTGTGAGCGCGGACTCGTCGGCGCCAGGTCCGGCGGAATTCCTCTCGTGGGCGTCCCATCCGCGCCGGCGGGGCTCAGGCGGGAG CGNATCTGGTGGCTGCG CGCCGCCATCCCCGCTGCTGCTGCCCTTTGCTCTAGGCTTCGTCCAAGGGAGAGGCAGGGGCACGAGGGGAGCGGCGCTCGCTTCCCCTTCCCGTCCGAGCGCACGCAGCCGGAGCAGCGTTGCTAGCAAACTGCTTCGACCGCCTGATGGAGGAGGCGGAGGCAAGGCCCGCGCCGNCTGACCCCAACGACGCGAGGCAGCGGTTCTTGTTGGAGCTCGAGTTCATCCAGTGCCTTGGCAACCCTANCTACAATNCACTATCTAGCG AGAACAGATACTTTGAGGATGAGGCGTTTATCGGTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA757089             [                                                                                                                                                                                                                                                                                                                                                   GCTCGAGTTCATCCAGTGCCTCGCCAACCCTACCTAC ATCCACTATCTAGCGCAGAACAGATACTTTGAGGATGAGGCGTTTATCGGTTATCTCAAGTATCTCAAGTATTGGCAGCGTCCGGAGTACATCAAGTACATAATGTATCCACACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAATGGCACATCCAGCAAGCAAGGAAGTTG CTCATAGGCAG CAATATTTCTTCTGGAAAAACTATAGGAACAATAGGCTAAAGCACATCTTACCCCGCCCTCCTCCTG AACCAACTCCCACGCCAGCACCTGCACCAGCAGCGGTGCCCCCATCAGCAT CAGTGCCGTCGACTGTGGTTCCACCTGTTGCTGCACCCCCATCAGCTTTGCTACCTATGT CAGCAGCTGGTGCATCTGCCATGTCTCCTATG CAGTTTGCAGGAACTCCTGGCACCAATATCCCAAAGAACGACATGAGAAATGT CATGGGTGGACAGGGTGGTAGAAAGAGAAAGAT AGGCTAGTGAAACTGTGGAAAATGCTGGTCAACTCAAGGACCACATTGNTG C AGGGAAGAGTAATCTTCAGATTTT                                                                                                                                                                                                        ]
[+] EMBL CB096896             [                                                                                                                                                                                                                                                                                                                                                                                                                               GGCGTTTATCGGTTATCTCAAGTATCTCAAGTATTGGCAGCGTCCGGAGTACATCAAGTACATAATGTATCCACACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAATGGCACATCCAGCAAGCAAGGAAGTTG CTCATAGGCAG CAATATTTCTTCTGGAAAAACTATAGGAACAATAGGCTAAAGCACATCTTACCCCGCCCTCCTCCTG AACCAACTCCCACGCCAGCACCTGCACCAGCAGCGGTGCCCCCATCAGCAT CAGTGCCGTCGACTGTGGTTCCACCTGTTGCTGCACCCCCATCAGCTTTGCTACCTATGT CAGCAGCTGGTGCATCTGCCATGTCTCCTATG CAGTTTGCAGGAACTCCTGGCACCAATATCCCAAAGAACGACATGAGAAATGT CATGGGTGGACAGGGTGGTAGAAAGAGAAAGAT AGGCTAGTGAAACTGTAGAAAATGCTGGTCAACTCAAGGACAACATTG TG CAAGGGAAGAGTAATCTTCAGATTTTTCTTTTCTCTGTAGGCCTTTATTTCAGACTCAGACAATTTAGAAGCTTAACAGTTATTTGTGCTGCTGGAGATGTAATTTAGATAACAATATGCCATGTACGCTTGGTCCTTGAATGATTGGCTCATTTATGTGGCCTTGTAGTTAGATAGTGTACTAATATT                                     ]
[+] EMBL CD645587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATCCACACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAATGGCACATCCAGCAAGCAAGGAAGTTG CTCATAGGCAG CAATATTTCTTCTGGAAAAACTATAGGAACAATAGGCTAAAGCACATCTTACCCCGCCCTCCTCCTG AACCAACTCCCACGCCAGCACCTGCACCAGCGGCGGTGCCCCCATCAGCAT CAGTGCCGTCGACTGTGGTTCCACCTGTTGCTGCACCCCCATCAGCTTTGCTACCTATGT CAGCAGCTGGTGCATCTGCCATGTCTCCTATG CAGTTTGCAGGAACTCCTGGCACCAATATCCCAAAGAACGACATGAGAAATGT CATGGGTGGACAGGGTGGTAGAAAGAGAAAGAT AGGCTAGTGAAACTGTGGAAAATGCTGGTCAACTCAAGGACAACATTG TG CAAGGGAAGAGTAATCTTCAGATTTTTCTTTTCTCTGTAGGCCTTTATTTCAGACTCAGACAATTTAGAAGCTTAACAGTTATTTGTGCTGCTGGAGATGTAATTTAGAT                                                                                                                    ]
[+] EMBL C99584               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTTGCCTCATAGGCAGCCAATATTTCTTCTGGAAAAACTATAGGAACAATAGGCT AAGCAC TCTTA CCCG CCTCCTCCTGAAACCAACTCCCACGCC GCCACTGCACCAGCAGC GTGCCCCCATCAGCATCCAGTGCCNTCGACTGTGGTTCCACCTGTTGCTGCACCCCCATCAGCTTTGCTACCTATGTCCAGCAGCTGGTGCATCTGCCATGTCTCCTATGCCAGTTTGCCGGAACTCCTGGCACCAATATCCCAAAGAACGACATGAGAAATGTCCATGGGTGGACAGGGTGGTAGAAAGAGAAAGATNAGGCTAGTGAAACTGTGGAAAATGCTGGTCAACTCAAGGACAACATTG TGCCAAGGGAAGAGTAATCTTCAGATTTTTCTTTTCTCTGTAGGCCTTTATTTCAGACTCAGACAATTTAGAAGCTTAACAGTTATTTGTGCTGCTGGAGATGTAATTTAGATAACAATATGCCATGTACGCTTGGTCCTTGAATGATTGGCTCATTTATGTGGCCTTGTAGTTAGATAGTGTACTAATATTTTGTTCAGGCCTAGTTTAGTTCCAACTTTTAAAAAAA]


>consensus_10809#0 TCGACGGTGCGGCTCGGGCGTTGTGAGCGCGGACTCGTCGGCGCCAGGTCCGGCGGAATT CCTCTCGTGGGCGTCCCATCCGCGCCGGCGGGGCTCAGGCGGGAGCCGGATCTGGTGGCT GCGCCGCCGCCATCCCCGCTGCTGCTGCCCTTTGCTCTAGGCTTCGTCCAAGGGAGAGGC AGGGGCACGAGGGGAGCGGCGCTCGCTTCCCCTTCCCGTCCGAGCGCACGCAGCCGGAGC AGCGCTGCTAGCAAACTGCTTCGACCGCCTGATGGAGGAGGCGGAGGCAAGGCCCGCGCC GCCTGACCCCAACGACGCGAGGCAGCGGTTCTTGTTGGAGCTCGAGTTCATCCAGTGCCT CGCCAACCCTACCTACATCCACTATCTAGCGCAGAACAGATACTTTGAGGATGAGGCGTT TATCGGTTATCTCAAGTATCTCAAGTATTGGCAGCGTCCGGAGTACATCAAGTACATAAT GTATCCACACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAAT GGCACATCCAGCAAGCAAGGAAGTTGCTCATAGGCAGCAATATTTCTTCTGGAAAAACTA TAGGAACAATAGGCTAAAGCACATCTTACCCCGCCCTCCTCCTGAACCAACTCCCACGCC AGCACCTGCACCAGCAGCGGTGCCCCCATCAGCATCAGTGCCGTCGACTGTGGTTCCACC TGTTGCTGCACCCCCATCAGCTTTGCTACCTATGTCAGCAGCTGGTGCATCTGCCATGTC TCCTATGCAGTTTGCAGGAACTCCTGGCACCAATATCCCAAAGAACGACATGAGAAATGT CATGGGTGGACAGGGTGGTAGAAAGAGAAAGATAGGCTAGTGAAACTGTGGAAAATGCTG GTCAACTCAAGGACAACATTGTGCAAGGGAAGAGTAATCTTCAGATTTTTCTTTTCTCTG TAGGCCTTTATTTCAGACTCAGACAATTTAGAAGCTTAACAGTTATTTGTGCTGCTGGAG ATGTAATTTAGATAACAATATGCCATGTACGCTTGGTCCTTGAATGATTGGCTCATTTAT GTGGCCTTGTAGTTAGATAGTGTACTAATATTTTGTTCAGGCCTAGTTTAGTTCCAACTT TTAAAAAAA



consensusID : consensus_10809#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1139
fasta sequence
                              [CTCACTTTTGCCCTCGCCGCCTGAGCGCCAGTACAAAGGGGAACGCCGAGTACGCCGCCGCCGCCGCCGCGCCGCCCGCCGCCGCGGCCCTCTCTGCTGCTGCCTCGCTCTAGGGTTCGTCCAAGGGGGGGGGGGAGAGAGAGAGAGAGAAGGGCGGCTCTCAGCGCGAGCAGCGGCGGGGCTTCCCCTTCCCGTCCGAGTGCCGCGCGCATCCAGGGCCTTCGAGGTGCTTGCTGCGTGATGGAGCCGGAGGCAATGCCGGCGCCTGACCCCAACGACGCGAGGCAGCGGTTCTTGTTGGAGCTCGAGTTCATCCAGTGCCTCGCAAACCCTACCTACATCCACTATCTAGCACAGAATAGGTACTTTGAGGATGAGGCATTTATCGGGTATCTCAAGTATCTCAAATACTGGCAGCGTCCGGAGTACATCAAATACATAATGTATCCGCACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAATGGCCCATCCAGCAAGCAAGGAAGTTGCTCATAGGCAGCAATATTTCTTCTGGAAAAACTATAGGAACAATAGGTTGAAGCACATCTTACCCCGCCCTCCTCCTGAACCAACTCCGGCACCTGCACCTGCACCTGCACCAGCAACAGTGCCCCCAGCAGCACCAGTGCCGTCGACCGTGGTTCCACCTGTTGCTGCACCATCATCATCTTTGCCACCTATGTCAGCAGCTGGTGCATCTGCAATGTCTCCTATGCAGTTTGCAGGAACCCCTGGCACCAATATCCCAAAGAACGACATGAGAAATGTCATGGGTGGACAGGGTGGTAGAAAGAGAAAGATGGGCTAGTGGAACTGTGGAACATGCTGGTCAACTTTAACAGACAGACAACATTGTATGCAAGTGAAGAGTAATCTTCATATTTATTTCCTCGTAGGCCTTTTTTTGCAGCAATTTAGAAGCTAACAGTTACTCCTATTTGTGCCGCTGGAGATGTAATTTGGATAACAATATGTCCTGTACGCTTGGCCCTTGAATGATTGGCTCATCTATGTGGCCTTGTAATTATAGGAGTACTAATTTTTTGGTCACTGGAAGATCACTGAAAACGCCAGAGAATCCACAGTAAAAGCCTGTTT]

[+] EMBL AK069258             [CTCACTTTTGCCCTCGCCGCCTGAGCGCCAGTACAAAGGGGAACGCCGAGTACGCCGCCGCCGCCGCCGCGCCGCCCGCCGCCGCGGCCCTCTCTGCTGCTGCCTCGCTCTAGGGTTCGTCCAAGGGGGGGGGGGAGAGAGAGAGAGAGAAGGGCGGCTCTCAGCGCGAGCAGCGGCGGGGCTTCCCCTTCCCGTCCGAGTGCCGCGCGCATCCAGGGCCTTCGAGGTGCTTGCTGCGTGATGGAGCCGGAGGCAATGCCGGCGCCTGACCCCAACGACGCGAGGCAGCGGTTCTTGTTGGAGCTCGAGTTCATCCAGTGCCTCGCAAACCCTACCTACATCCACTATCTAGCACAGAATAGGTACTTTGAGGATGAGGCATTTATCGGGTATCTCAAGTATCTCAAATACTGGCAGCGTCCGGAGTACATCAAATACATAATGTATCCGCACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAATGGCCCATCCAGCAAGCAAGGAAGTTGCTCATAGGCAGCAATATTTCTTCTGGAAAAACTATAGGAACAATAGGTTGAAGCACATCTTACCCCGCCCTCCTCCTGAACCAACTCCGGCACCTGCACCTGCACCTGCACCAGCAACAGTGCCCCCAGCAGCACCAGTGCCGTCGACCGTGGTTCCACCTGTTGCTGCACCATCATCATCTTTGCCACCTATGTCAGCAGCTGGTGCATCTGCAATGTCTCCTATGCAGTTTGCAGGAACCCCTGGCACCAATATCCCAAAGAACGACATGAGAAATGTCATGGGTGGACAGGGTGGTAGAAAGAGAAAGATGGGCTAGTGGAACTGTGGAACATGCTGGTCAACTTTAACAGACAGACAACATTGTATGCAAGTGAAGAGTAATCTTCATATTTATTTCCTCGTAGGCCTTTTTTTGCAGCAATTTAGAAGCTAACAGTTACTCCTATTTGTGCCGCTGGAGATGTAATTTGGATAACAATATGTCCTGTACGCTTGGCCCTTGAATGATTGGCTCATCTATGTGGCCTTGTAATTATAGGAGTACTAATTTTTTGGTCACTGGAAGATCACTGAAAACGCCAGAGAATCCACAGTAAAAGCCTGTTT]


>consensus_10809#1 CTCACTTTTGCCCTCGCCGCCTGAGCGCCAGTACAAAGGGGAACGCCGAGTACGCCGCCG CCGCCGCCGCGCCGCCCGCCGCCGCGGCCCTCTCTGCTGCTGCCTCGCTCTAGGGTTCGT CCAAGGGGGGGGGGGAGAGAGAGAGAGAGAAGGGCGGCTCTCAGCGCGAGCAGCGGCGGG GCTTCCCCTTCCCGTCCGAGTGCCGCGCGCATCCAGGGCCTTCGAGGTGCTTGCTGCGTG ATGGAGCCGGAGGCAATGCCGGCGCCTGACCCCAACGACGCGAGGCAGCGGTTCTTGTTG GAGCTCGAGTTCATCCAGTGCCTCGCAAACCCTACCTACATCCACTATCTAGCACAGAAT AGGTACTTTGAGGATGAGGCATTTATCGGGTATCTCAAGTATCTCAAATACTGGCAGCGT CCGGAGTACATCAAATACATAATGTATCCGCACTGCCTTTTCTTTCTTGAGCTCCTCCAA AATGCGAATTTCCGGAATGCAATGGCCCATCCAGCAAGCAAGGAAGTTGCTCATAGGCAG CAATATTTCTTCTGGAAAAACTATAGGAACAATAGGTTGAAGCACATCTTACCCCGCCCT CCTCCTGAACCAACTCCGGCACCTGCACCTGCACCTGCACCAGCAACAGTGCCCCCAGCA GCACCAGTGCCGTCGACCGTGGTTCCACCTGTTGCTGCACCATCATCATCTTTGCCACCT ATGTCAGCAGCTGGTGCATCTGCAATGTCTCCTATGCAGTTTGCAGGAACCCCTGGCACC AATATCCCAAAGAACGACATGAGAAATGTCATGGGTGGACAGGGTGGTAGAAAGAGAAAG ATGGGCTAGTGGAACTGTGGAACATGCTGGTCAACTTTAACAGACAGACAACATTGTATG CAAGTGAAGAGTAATCTTCATATTTATTTCCTCGTAGGCCTTTTTTTGCAGCAATTTAGA AGCTAACAGTTACTCCTATTTGTGCCGCTGGAGATGTAATTTGGATAACAATATGTCCTG TACGCTTGGCCCTTGAATGATTGGCTCATCTATGTGGCCTTGTAATTATAGGAGTACTAA TTTTTTGGTCACTGGAAGATCACTGAAAACGCCAGAGAATCCACAGTAAAAGCCTGTTT



consensusID : consensus_10809#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 388
fasta sequence
                              [ATGAGGCGTTTATCGGTTATCTCAAGTATCTCAAGTATTGGCAGCGTCCGGAGTACATCAAGTACATAATGTGTGTGGCCCTATAATTTAGATTTATCTGCAAGTAGGTGCCTGCTGTGACGAAATACCTTTGTTCATAGTGGTTGCTGATGATGCAGGTATCCACACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAATGGCACATCCAGCAAGCAAGGAAGTTGCTCATAGGCAGCAATATTTCTTCTGGAAAAACTATAGGAACAATAGGCTAAAGCACATCTTACCCCGCCCTCCTCCTGAACCAACTCCCACGCCAGCACCTGCACCAGCAGCGGTGCCCCCATCAGCATCAGTGCCGTCGACTG]

[+] EMBL AU174589             [ATGAGGCGTTTATCGGTTATCTCAAGTATCTCAAGTATTGGCAGCGTCCGGAGTACATCAAGTACATAATGTGTGTGGCCCTATAATTTAGATTTATCTGCAAGTAGGTGCCTGCTGTGACGAAATACCTTTGTTCATAGTGGTTGCTGATGATGCAGGTATCCACACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAATGGCACATCCAGCAAGCAAGGAAGTTGCTCATAGGCAGCAATATTTCTTCTGGAAAAACTATAGGAACAATAGGCTAAAGCACATCTTACCCCGCCCTCCTCCTGAACCAACTCCCACGCCAGCACCTGCACCAGCAGCGGTGCCCCCATCAGCATCAGTGCCGTCGACTG]


>consensus_10809#2 ATGAGGCGTTTATCGGTTATCTCAAGTATCTCAAGTATTGGCAGCGTCCGGAGTACATCA AGTACATAATGTGTGTGGCCCTATAATTTAGATTTATCTGCAAGTAGGTGCCTGCTGTGA CGAAATACCTTTGTTCATAGTGGTTGCTGATGATGCAGGTATCCACACTGCCTTTTCTTT CTTGAGCTCCTCCAAAATGCGAATTTCCGGAATGCAATGGCACATCCAGCAAGCAAGGAA GTTGCTCATAGGCAGCAATATTTCTTCTGGAAAAACTATAGGAACAATAGGCTAAAGCAC ATCTTACCCCGCCCTCCTCCTGAACCAACTCCCACGCCAGCACCTGCACCAGCAGCGGTG CCCCCATCAGCATCAGTGCCGTCGACTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10809#0      TCGACGGTGCGGCTCGGGCGTTGTGAGCGCGGACTCGTCGGCGCCAGGTCCGGCGGAATT 60
consensus_10809#1      ------------------------------------------CTCACTTTTGCC----CT 14
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      CCTCTCGTGGGCGTCC-CATCCGCGCCGGCGGGGCTCAGGCGGGAGCCGGATCTGGTGGC 119
consensus_10809#1      CGCCGCCTGAGCGCCAGTACAAAGGGGAACGCCGAGTACGCCGCCGCCGCCGCCGCGCCG 74
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      TGCGCCGCCGCCATCCCCGCTGCTGCTGCCCTTTGCTCTAGGCTTCGTCCAAGGGAGAGG 179
consensus_10809#1      CCCGCCGCCGCGGCCCTCTCTGCTGCTGCC--TCGCTCTAGGGTTCGTCCAAGGGGGGGG 132
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      CAGGGGCAC-----GAGGGGAGCGGCGCTCGCTTCCCCTTCCCGTCCGAGCGCACGCAGC 234
consensus_10809#1      GGGAGAGAGAGAGAGAGAAGGGCGGCTCTCAGCGCGAGCAGCGGCGGGGCTTCCCCTTCC 192
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      CGGAGCAGCGCTGCTAGCAAACTG---CTTCGA-----CCGCCTGATGGAGGAGGCGGAG 286
consensus_10809#1      CGTCCGAGTGCCGCGCGCATCCAGGGCCTTCGAGGTGCTTGCTGCGTGATGGAGCCGGAG 252
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      GCAAGGCCCGCGCCGCCTGACCCCAACGACGCGAGGCAGCGGTTCTTGTTGGAGCTCGAG 346
consensus_10809#1      GCAATGCCGGCGCC---TGACCCCAACGACGCGAGGCAGCGGTTCTTGTTGGAGCTCGAG 309
consensus_10809#2      ---------------------------------ATGAGGCGTTTATCGGTT-ATCTCAAG 26
                                                        * *  *** ** * * *  * *** **

consensus_10809#0      TTCATCCAGTGCCTCGCCAACCCTACCTACATCCACTATCTAGCGCAGAACAGATACTTT 406
consensus_10809#1      TTCATCCAGTGCCTCGCAAACCCTACCTACATCCACTATCTAGCACAGAATAGGTACTTT 369
consensus_10809#2      TATCTCAAGTATTGGCAGCGTCCGGAGTACATCAAGTACATAATGTGTGT--GGCCCTAT 84
                       *   ** ***           **    ****** * **  **          *   ** *

consensus_10809#0      GAGGATGAGGCGTTTATCGGTTATCTCAAGTATCTCAAGTATTGGCAGCGTCCGGAGTAC 466
consensus_10809#1      GAGGATGAGGCATTTATCGGGTATCTCAAGTATCTCAAATACTGGCAGCGTCCGGAGTAC 429
consensus_10809#2      AATTTAGATTTATCTG-CAAGTAGGTGCCTGCTGTGACGAAATACCTTTGTTCATAGTGG 143
                        *    **    * *  *   **  *      * * *   * *  *   ** *  ***  

consensus_10809#0      AT-CAAGTACATAATGTATCCACACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAA 525
consensus_10809#1      AT-CAAATACATAATGTATCCGCACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAA 488
consensus_10809#2      TTGCTGATGATGCAGGTATCCACACTGCCTTTTCTTTCTTGAGCTCCTCCAAAATGCGAA 203
                        * *   *     * ****** **************************************

consensus_10809#0      TTTCCGGAATGCAATGGCACATCCAGCAAGCAAGGAAGTTGCTCATAGGCAGCAATATTT 585
consensus_10809#1      TTTCCGGAATGCAATGGCCCATCCAGCAAGCAAGGAAGTTGCTCATAGGCAGCAATATTT 548
consensus_10809#2      TTTCCGGAATGCAATGGCACATCCAGCAAGCAAGGAAGTTGCTCATAGGCAGCAATATTT 263
                       ****************** *****************************************

consensus_10809#0      CTTCTGGAAAAACTATAGGAACAATAGGCTAAAGCACATCTTACCCCGCCCTCCTCCTGA 645
consensus_10809#1      CTTCTGGAAAAACTATAGGAACAATAGGTTGAAGCACATCTTACCCCGCCCTCCTCCTGA 608
consensus_10809#2      CTTCTGGAAAAACTATAGGAACAATAGGCTAAAGCACATCTTACCCCGCCCTCCTCCTGA 323
                       **************************** * *****************************

consensus_10809#0      ACCAACTCC------CACGCCAGCACCTGCACCAGCAGCGGTGCCCCCATCAGCATCAGT 699
consensus_10809#1      ACCAACTCCGGCACCTGCACCTGCACCTGCACCAGCAACAGTGCCCCCAGCAGCACCAGT 668
consensus_10809#2      ACCAACTCC------CACGCCAGCACCTGCACCAGCAGCGGTGCCCCCATCAGCATCAGT 377
                       *********        * ** *************** * ********* ***** ****

consensus_10809#0      GCCGTCGACTGTGGTTCCACCTGTTGCTGCACCCCCATCAGCTTTGCTACCTATGTCAGC 759
consensus_10809#1      GCCGTCGACCGTGGTTCCACCTGTTGCTGCACCATCATCATCTTTGCCACCTATGTCAGC 728
consensus_10809#2      GCCGTCGACTG------------------------------------------------- 388
                       ********* *                                                 

consensus_10809#0      AGCTGGTGCATCTGCCATGTCTCCTATGCAGTTTGCAGGAACTCCTGGCACCAATATCCC 819
consensus_10809#1      AGCTGGTGCATCTGCAATGTCTCCTATGCAGTTTGCAGGAACCCCTGGCACCAATATCCC 788
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      AAAGAACGACATGAGAAATGTCATGGGTGGACAGGGTGGTAGAAAGAGAAAGATAGGCTA 879
consensus_10809#1      AAAGAACGACATGAGAAATGTCATGGGTGGACAGGGTGGTAGAAAGAGAAAGATGGGCTA 848
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      GTGAAACTGTGGAAAATGCTGGTCAACTCAAG------GACAACATTGT--GCAAGGGAA 931
consensus_10809#1      GTGGAACTGTGGAACATGCTGGTCAACTTTAACAGACAGACAACATTGTATGCAAGTGAA 908
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      GAGTAATCTTCAGATTTTTCTTTTCTCTGTAGGCCTTTATTT-CAGACTCAGACAATTTA 990
consensus_10809#1      GAGTAATCTTCATATTT---ATTTCCTCGTAGGCCTTTTTTTGCAGCAATTTAGAAGCTA 965
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      GAAGCTTAACAGTTATTTGTGCTGCTGGAGATGTAATTTAGATAACAATATGCCATGTAC 1050
consensus_10809#1      ACAGTT--ACTCCTATTTGTGCCGCTGGAGATGTAATTTGGATAACAATATGTCCTGTAC 1023
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      GCTTGGTCCTTGAATGATTGGCTCATTTATGTGGCCTTGTAGTTAGATAGTGTACTAATA 1110
consensus_10809#1      GCTTGGCCCTTGAATGATTGGCTCATCTATGTGGCCTTGTAATTATA-GGAGTACTAATT 1082
consensus_10809#2      ------------------------------------------------------------
                                                                                   

consensus_10809#0      TTTTGTTCAGGCCTAGTTTAGTTCCAACTTTTAAAAAAA------------------ 1149
consensus_10809#1      TTTTGGTCACTGGAAGATCACTGAAAACGCCAGAGAATCCACAGTAAAAGCCTGTTT 1139
consensus_10809#2      ---------------------------------------------------------
                                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)