These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10810#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 890 fasta sequence [CCCAACTTCTTAAAGAACAAAAAACGATCAGCCATGAAGAGCGGCAGCCTGCTGACGCTC-ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCGGCTACGTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGCACCGGCGGCGGCGGCGAGGAGGCGGTGAGGTCGAGGCCGTGGAAATGCTGCGACGACGCCGTGTGCACAAGGTCGATGCCGCCGACGTGCAGCTGCCAGGACAAGGTGAAGTCGTGCTCCGGCGGCTGCGGCAAGTGCGTGCAGGTGGAGTCGCAGCCGCCGCGCTTCCGCTGCCTCGATCGCTACCACGGCTTCCCGGGGCCCAAGTGTCACAA-CCAGCCAGC-TTAATTAGCTACTCATGTTAATTAGCCTCAGATCATACGATCCAA-CGGTGAATAAGAGCGACGCGTCGAGC-AGGGGCGCACGCGCTGACCGCTCGATC-AGCG-TTAACGCCTTGC-TTGCTGCCG-AGTAGCAGTGACATATGTGTAACATT-CGTGTGGTCACGTATG-TTTTTT-TCCTTTATTGTG-TTTTTTTTCTTTATTGTGTTTGTTTTATCTGGATCGTGAGGG-AATGTTTCGGTGACCAGAGTACGTAGTACTAGTATGTTGTGGTTGCTGTCCAATAAATAAGATGAATTTGGTNGCAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK102138 [CCCAACTTCTTAAAGAACAAAAAACGATCAGCCATGAAGAGCGGCAGCCTGCTGACGCTC ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCGGCTACGTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGCACCGGCGGCGGCGGCGAGGAGGCGGTGAGGTCGAGGCCGTGGAAATGCTGCGACGACGCCGTGTGCACAAGGTCGATGCCGCCGACGTGCAGCTGCCAGGACAAGGTGAAGTCGTGCTCCGGCGGCTGCGGCAAGTGCGTGCAGGTGGAGTCGCAGCCGCCGCGCTTCCGCTGCCTCGATCGCTACCACGGCTTCCCGGGGCCCAAGTGTCACAA CCAGCCAGC TTAATTAGCTACTCATGTTAATTAGCCTCAGATCATACGATCCAA CGGTGAATAAGAGCGACGCGTCGAGC AGGGGCGCACGCGCTGACCGCTCGATC AGCG TTAACGCCTTGC TTGCTGCCG AGTAGCAGTGACATATGTGTAACATT CGTGTGGTCACGTATG TTTTTT TCCTTTATTGTGTTTTTTTTTCTTTATTGTGTTTGTTTTATCTGGATCGTGAGGG AATGTTTCGGTGACCAGAGTACGTAGTACTAGTATGTTGTGGTTGCTGTCCAATAAATAAGATGA ] [+] EMBL AK105455 [ AACTTCTTAAAGAACAAAAAACGATCAGCCATGAAGAGCGGCAGCCTGCTGACGCTC ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCGGCTACGTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGCACCGGCGGCGGCGGCGAGGAGGCGGTGAGGTCGAGGCCGTGGAAATGCTGCGACGACGCCGTGTGCACAAGGTCGATGCCGCCGACGTGCAGCTGCCAGGACAAGGTGAAGTCGTGCTCCGGCGGCTGCGGCAAGTGCGTGCAGGTGGAGTCGCAGCCGCCGCGCTTCCGCTGCCTCGATCGCTACCACGGCTTCCCGGGGCCCAAGTGTCACAA CCAGCCAGC TTAATTAGCTACTCATGTTAATTAGCCTCAGATCATACGATCCAA CGGTGAATAAGAGCGACGCGTCGAGC AGGGGCGCACGCGCTGACCGCTCGATC AGCG TTAACGCCTTGC TTGCTGCCG AGTAGCAGTGACATATGTGTAACATT CGTGTGGTCACGTATGTTTTTTT TCCTTTATTGTG TTTTTTTTCTTTATTGTGTTTGTTTTATCTGGATCGTGAGGG AATGTTTCGGTGACCAGAGTACGTAGTACTAGTATGTTGTGGTTGCTGTCCAATAAATAAGATGA ] [+] EMBL OSR14061A [ CAAAAAACGATCAGCCATGAAGAGCGGCAG CTGCTGACGCTC ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAACAGCAACATCCGCCTCCCCACCGANGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGNTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTC ] [+] EMBL CA754640 [ ATCAGCCATGAAGAGCGGCAGCCTGCTGACGCTC ACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCTCCTCCGCCGCTGTCACCCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCGGCTACGTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGCACCGGCGGCGGCGGCGAGGAGGCGGTGAGGTCGAGGCCGTGGAAATGCTGCGACGACGCCGTGTGCACAAGGTCGATGCCGCCGACGTGCAGCTGCCAGGACAAGGTGAAGTCGTGCTCCGGCGGCTGCGGCAAGTGCGTGCAGGTGGAGTCGCAGCCGCCGCGCTTCCGCTGCCTCGATCGCTACCACGGCTTCCCGGGGCCCAAGTGTCACAA CCAGCCAGC TTAATTAGCTACTCATGTTAATTAGCCTCAGATCATACGATCCAA CGGTGAATAA ] [+] EMBL AU030400 [ CAGCCATGAAGAGCGGCA CCTGCTGAC NTCAACCCTGGGAGCCCTCCTCCTCGCCGGCATCCCCATCNCCTCCGCCGCTGTCACNCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCGTGGGACTGCTGCGACAAG TGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACNGCGCCGCCGCCTGCGAGGACTNCAAGCGTGCCGACGG GGCGGCTACGTCTGCCGGGACTGGTACTGGG ] [+] EMBL BE040470 [ TCACCCCCAACAGCAACATCCGCCTCCCCACCGACGGCGGCGACGAATGGCCGTCACCGCCTTGGGACTGCTGCGACAAGCTGAAGCAGTCGCCGCTCAGGATCTGGCCGCCCAAGTACAAGTGCCTGGACGAGGTCGACCACTGCGCCGCCGCCTGCGAGGACTGCAAGCGTGCCGACGGCGGCAGCTACGTCTGCCGGGACTGGTACTGGGGCGTCAACCCCGGGCCCAAGTGC ] [+] EMBL AU184150 [ CGCTGCCTCGATCGCTACCACGGCTTCCCGGGGCCCAAGTGTCNCAACCCAGCCAGCTTTAATTAGCTACTCATGTTAATTAGCCTCAGATCATACGATCCAACCGGTGAATAGAAGCGACGCGTCGAGCAAGGGGCGCACGCGCTGACCGCTCGATCAAGCGTTTAACGCCTTGCTTTGCTGCCGAAGTAGCAGTGACATATGTGTAACATT CGTGTGGTCACGTATG TTTTTT TCC TTATTGTG TTTTTTTTCTTTATGGTGTTTG TTTATCTGGATCGTGAGGGAAATGTTTCGGTGACCAGAGTACGTAGTACTAaaaa ] [+] EMBL AU095051 [ GGGGCGCACGCGCTGACCGCTCGATC AGCG TTAACGCCTTGC TTGCTGCCG AGTAGCAGTGACATATGTGTAACATTNCGTGTGGTCACGTATG TTTTTTNCCCTTTATTGTG TTTTTTTTCNTTATTGTGTTTGTTTTATCTGGATCGTGAGGG AATGTTTCGGTGACCAGAGTACGTAGTACTAGTATGTTGTGGTTGNTGTCCAATAAATAAGATGAATTTGGTNGCAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||