cluster # 10811

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Oryza sativa
cluster # 10811 cluster # 10811 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10811#0 length = 1386 sequences # 8
consensusID : consensus_10811#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1386
fasta sequence
                              [AGTATTACACCACCCAACACAAGCTCAGCCAGTTTACCACTCACACTAGCTGAGCTAG-AACTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTCTCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCAGCCGATGGTCCGGCCACACAAGGGCGGCGCCATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCAAGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCCGCGAATGGCGGCGAGCTCGTCAGCCCCGCCGGCTCATCCAGGTACCTGCTCAGCAGCCGCGC-CGCCGCCGCCGAGGAGATCCAGGAGGTGGAGGCTTCGGCTGCTCCGGCCGTCGATGCCAAGGTGGTCAGGGAAGAGCAAGCTGGTAGTGATGTGAAGAACACTCTGACGCAGGAGCAGGTGGTTGTACTGAAGGTATCAC-TGCACTGCAAAGCGTGCGCGGGCAAAG-TGAAGAAGCACC-TCGCCAAGATGGAAGGAGTGACATCTTTCAACATAGACTTCGCGGCGAAGAAGGTGACGGTGGTCGGCGACGTGACGCC-GC-TGGG-GGTGCTGAACAGCG-TGTCCAAGGTGAAGAACGCCCAGTTCTGGGCGGCGCCGCCGGCGATAGCCGCCTGATGAGAGATGAAAACGCATAGGATCCTCTCTGGTTAATTAGGTGCGGAAGCATGTGGGT-CACTGATGCTGGACCAGCTCGCTCTGCTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGCGCGTCGTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCTTCTTACTGTGATCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTTCTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGTGTTGTTCTTTTGCATGCTCTTACTGTAATATAAAC-TTTCACTGCAAGTCTGCAATACTGCATTATTGTTGTGTCGTACTGCAACTGTAGGTGGTGATCGCGTAGGTTGAGGTGGGATCGAGATCCTCTGCCTTCAAAACACCATACTTTTATCGCTGAAAGGTGAACCTATGATTCATCAAGTTCATATGTCAGTGATAAAGACATGTACATTTGAAGGTAGAGGAACATGATCCGTTGTGGTGGTGAGTAAACAGCAGCATCAGCCTAATTTGCTTGCAAGGTCAATAACATTTTTTAGATCAATAACATGTAGTAGCAGAACTCTCAAATGGAAAATAATGATTTATCCCTAGTACAATAAAAA]

[+] EMBL AK070263             [AGTATTACACCACCCAACACAAGCTCAGCCAGTTTACCACTCACACTAGCTGAGCTAG AACTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTCTCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCAGCCGATGGTCCGGCCACACAAGGGCGGCGCCATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCAAGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCCGCGAATGGCGGCGAGCTCGTCAGCCCCGCCGGCTCATCCAGGTACCTGCTCAGCAGCCGCGC CGCCGCCGCCGAGGAGATCCAGGAGGTGGAGGCTTCGGCTGCTCCGGCCGTCGATGCCAAGGTGGTCAGGGAAGAGCAAGCTGGTAGTGATGTGAAGAACACTCTGACGCAGGAGCAGGTGGTTGTACTGAAGGTATCAC TGCACTGCAAAGCGTGCGCGGGCAAAG TGAAGAAGCACC TCGCCAAGATGGAAGGAGTGACATCTTTCAACATAGACTTCGCGGCGAAGAAGGTGACGGTGGTCGGCGACGTGACGCC GC TGGG GGTGCTGAACAGCG TGTCCAAGGTGAAGAACGCCCAGTTCTGGGCGGCGCCGCCGGCGATAGCCGCCTGATGAGAGATGAAAACGCATAGGATCCTCTCTGGTTAATTAGGTGCGGAAGCATGTGGGT CACTGATGCTGGACCAGCTCGCTCTGCTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGCGCGTCGTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCTTCTTACTGTGATCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTTCTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGTGTTGTTCTTTTGCATGCTCTTACTGTAATATAAAC                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU183870             [                ACACAAGCTCAGCCAGTTTACCACTCACACTAGCTGAGCTAGNAACTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTCTCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCAGCCGATGGTCCGGCCACACAAGGGCGGCGCCATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCAAGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCCGCGAATGGCGGCGAGCTCGTCAGCCCCGCCGGCTCATCCAGGTACCTGCTCAGCAGCCGCGC CGCCGCCGCCGAGGAGATCCAGGAGGTGGAGGCTTCGGCTGCTCCGGCCGTCGATGCCAAGGTGGTCAGGGAAGAGCAAGCTGGTAGTGATGTGAAGAACACTCTGACGCAGGAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C74796               [                                TTTACCACTCACACTAGCTGAGCTAG AACTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTCTCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCA CCGATGGTCCGGCCACACAAGGGCGGCGCCATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCAAGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCCGCGAATGGCGGCGAGCTCGTCAGCCCCGACGGCTCATCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU030220             [                                    CCACTCACACTAGCTGAGCTAG AACTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTCTCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCA NCGATGGTCCGGCCACACAAGGGCGGCG CATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCAAGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAG ATCAG ACAAGGCGGCTG CGCGAATGGC GCGAGCTCGTCAG CCCGCCGGCTCATCCAGGTA CTGCTCA NA CCGCGCGCG CGCCGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C72789               [                                                                                                                                                                                                                                                           ACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCCGCGAATGGCGGCGAGCTCGTCAGCCCCGCCGGCTCATCCAGGTACCTGCTCAGCAGCCGCGC CGCCGCCGCCGAGGAGATCCAGGAGGTGGAGGCTTCGGCTGCTCCGGCCGTCGATGCCAAGGTGGTCAGGGAAGAGCAAGCTGGTAGTGATGTGAAGAACACTCTGACGCAGGAGCAGGTGGTTGTACTGAAGGTATCACTTGCACTGCAAAGCGTGCGCGGGCAAAGTTGAAGAAGCACCTTCGCCAAGATGGAAGGAGTGACATCTTTCAACATAGCTTTCGCGGCGAAGAAGGTTACGGTTGTCGGCGACGTTACGCC GCTTGGG GGTGCTTAACAGCGTTTTCCAAGGTGAAGAACG CCANTTTTNGGGGGCGCC NCGGCGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU094074             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  nTGGTTGTACTGAAGGTATCAC TGCACTGCAAA CGTGCGCGGGCAAAG TGAAGAAGCACC TCGCCAAGATGGAAGGAGTGACATCTTTCAACATAGACTTCGCGGCGAAGAAGGTGACGGTGGTCGGCGACGTGACGCC GN TGGG GGTGCTGAACAGCG TGTCCAANGTGAAGAACGCCCAGTTCTGGGCGGC CCGCCGGCGATAGCCGCCTGATGAGAGATGAAAACGCATAGGATCCTCTCTGGTTAATTAGGTGCGGAAGCATGTGGGT CACTGATGCTGGACCAGCTCGCTCTGCTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGCGCGTCGTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCTTCTTACTGTGATCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTTCTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGTGTTGTTCTTTTGCATGCTCTTACTGTAATATAAAC TTTCACTGCAAaaaaa                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA765284             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                cgggagGAAGGGA GCCGGG AGGGAGAGGCTGAACAGCG TGTCCAAGGTGAAGAACGCCCAGTTCTGGGCGGCGCCGCCGGCGATAGCCGCCTGATGAGAGATGAAAACGCATAGGATCCTCTCTGGTTAATTAGGTGCTGAAGCATGTGGGT CACTGATGCTGGACCAGCTCGCTCTGCTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGTGCGTCGTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCTTCTTACTGTGATCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTTCTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGTGTTGTTCTTTTGCATGCTCTTACTGTAATATAAACGTTTCACTGCAAGTCTGCAATA                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU030221             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCATGTGGGTCCACTGATGCTGGACCAGCTCGCTCTGCTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGCGCGTCNTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCCTCTTACTGTGATCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTTCTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGTGTTGTTCTTTTGCATGCTCTTACTGTAATATAAACGTTTCACTGCAAGTCTGCAATACTGCATTATTGTTGTGTCGTACTGCAACTGTAGGTGGTGATCGCGTAGGTTGAGGTGGGATCGAGATCCTCTGCCTTCAAAACACCATACTTTTATCGCTGAAAGGTGAACCTATGATTCATCAAGTTCATATGTCAGTGATAAAGACATGTACATTTGAAGGTAGAGGAACATGATCCGTTGTGGTGGTGAGTAAACAGCAGCATCAGCCTAATTTGCTTGCAAGGTCAATAACATTTTTTAGATCAATAACATGTAGTAGCAGAACTCTCAAATGGAAAATAATGATTTATCCCTAGTACAATAAAAA]




>consensus_10811#0
AGTATTACACCACCCAACACAAGCTCAGCCAGTTTACCACTCACACTAGCTGAGCTAGAA
CTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTC
TCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCAGCCGATGGTC
CGGCCACACAAGGGCGGCGCCATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCA
AGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCC
GCGAATGGCGGCGAGCTCGTCAGCCCCGCCGGCTCATCCAGGTACCTGCTCAGCAGCCGC
GCCGCCGCCGCCGAGGAGATCCAGGAGGTGGAGGCTTCGGCTGCTCCGGCCGTCGATGCC
AAGGTGGTCAGGGAAGAGCAAGCTGGTAGTGATGTGAAGAACACTCTGACGCAGGAGCAG
GTGGTTGTACTGAAGGTATCACTGCACTGCAAAGCGTGCGCGGGCAAAGTGAAGAAGCAC
CTCGCCAAGATGGAAGGAGTGACATCTTTCAACATAGACTTCGCGGCGAAGAAGGTGACG
GTGGTCGGCGACGTGACGCCGCTGGGGGTGCTGAACAGCGTGTCCAAGGTGAAGAACGCC
CAGTTCTGGGCGGCGCCGCCGGCGATAGCCGCCTGATGAGAGATGAAAACGCATAGGATC
CTCTCTGGTTAATTAGGTGCGGAAGCATGTGGGTCACTGATGCTGGACCAGCTCGCTCTG
CTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGC
GCGTCGTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCTTCTTACTGTGA
TCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTT
CTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGT
GTTGTTCTTTTGCATGCTCTTACTGTAATATAAACTTTCACTGCAAGTCTGCAATACTGC
ATTATTGTTGTGTCGTACTGCAACTGTAGGTGGTGATCGCGTAGGTTGAGGTGGGATCGA
GATCCTCTGCCTTCAAAACACCATACTTTTATCGCTGAAAGGTGAACCTATGATTCATCA
AGTTCATATGTCAGTGATAAAGACATGTACATTTGAAGGTAGAGGAACATGATCCGTTGT
GGTGGTGAGTAAACAGCAGCATCAGCCTAATTTGCTTGCAAGGTCAATAACATTTTTTAG
ATCAATAACATGTAGTAGCAGAACTCTCAAATGGAAAATAATGATTTATCCCTAGTACAA
TAAAAA
clustalw multiple alignements is not computed in this case