These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10813#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1330 fasta sequence [TCCTGGGCTTTTTAGTCTACTCGATCTAACTCCAAATCCCATCAACCCCGCCGCCGCCGCCGCCGCCGCCACCACCGCGAGACGCGAGAGGAGAGTGAAAGAAAGATTCAGAGAGAGAGAGAGAGTAAGCATGATGTCCTTCAGCCAGCCCGACGCCTTCTCGCCGTCGCAGTTCACCTCCTCCCAGAATGCCGCCGCCGACTCTACCACCCCTTCCAAGAGCCGGGGCGCATCGAGCACCATGCCGCTCACCGTGAAGCAGATCTCTGAAGCGCAGCAATCTGGCATCACCGGGGAGAAGGGCGCTCCCTTCGTCGTCGACGGCGTCGAGACAGCCAACGTTAGGCTTGTGGGATTGGTCAGTGGCAAGACGGAGCGGAACACCGATGTGTCCTTCACGATCGACGATGGCACCGGCCGCCTCGATTTCATCAGATGGGTCAATGATGGTGCTGATTCTGCTGAAACCGCTGCTGTTCAGAATGGAATGTATGTTTCTGTCATTGGTAGCCTCAAGGGGCTTCAGGAGAGGAAGCGTGCTACTGCTTTCGCTATCAGGCCTGTAACTGATTATAATGAGGTCACACTGCATTTCA-TTCAGTGCGTGCGAATGCATTTAGAGAA-CACCAAATCACAGATTGGTAGCCCTGCAAAAACATA-TTCTG-CCATGGGATCCTCATCTTCCAATGGCTTCAGTGAAATGACCACTCCGACCTCTGTGAAATCCAACCCGGCACCAGTGCTCAGT-GTAACAAATGGATCAAAAACTGAT-TTGAACACAGAAGT-GCTGAATGTTTTCCGCGA-ACCAGCAAACGT-CGAGAGCGAGCA-TGGTGTGC-ACA-TTGATGAAATCGTGAAGCGCTTCAGGCTA-CCGGAGGCCAAGATCAAGGTAGCTATTGATTACCTCGCTGACATTGGGCACATATACTCAACAATCGACGAGTCTCACTACAAGTCAGCGTTCAATGAATAAAGGGGATTGAAGCCTCAGTTACTTACTAGTATGTATCCTCTAGCCTCGAAGCTGGCTGCAGCTGAAACTGAAGAACAATCGAGATGCTTCATGTTTGCTTGTCATACTAACCAGTGTGCGTTTGTTTTGCTCCATCCAGTGAAATTACATGTAACCGTATCTGTATTACGAGTAGCACATATCGAGTGACAAAACATATAATATATGTATGTTTGTTGTTTTGCAGCATCAGCATTATTTGGACTGTAACATGCTTGATTGATCTCTTTGGATGCAGTTAATTTCATTGTGATATTAACTCACGCATCATCGATCGATCGTGTGTTTTTTGGTAGCTAGATGGTCCAATCACAATAATCT] [+] EMBL AU162293 [TCCTGGGCTTTTTAGTCTACTCGATCTAACTCCAAATCCCATCAACCCCGCCGCCGCCGCCGCCGCCGCCACCACCGCGAGACGCGAGAGGAGAGTGAAAGAAANATTCAGAGAGAGNGANAGAGTAAGCATGATGTCCTTCAGCCAGCCCGACGCCTTCTCGCCGTCGCAGTTCACCTCCTCCCAGAATGCCGCCGCCGACTCTACCACCCCTTCCAAGAGCCGGGGCGCATCGAGCACCATGCCGCTCACCGTGAAGCAGATCTCTGAAGCGCA AACTCTGGCATCACCGGGGAGAAGGGC NT CCTTCGTCGTCNA GGCGT GAGACAG CAACGTTAGct ] [+] EMBL AK103235 [ TTAGTCTACTCGATCTAACTCCAAATCCCATCAACCCCGCCGCCGCCGCCGCCGCCGCCACCACCGCGAGACGCGAGAGGAGAGTGAAAGAAAGATTCAGAGAGAGAGAGAGAGTAAGCATGATGTCCTTCAGCCAGCCCGACGCCTTCTCGCCGTCGCAGTTCACCTCCTCCCAGAATGCCGCCGCCGACTCTACCACCCCTTCCAAGAGCCGGGGCGCATCGAGCACCATGCCGCTCACCGTGAAGCAGATCTCTGAAGCGCAGCAATCTGGCATCACCGGGGAGAAGGGCGCTCCCTTCGTCGTCGACGGCGTCGAGACAGCCAACGTTAGGCTTGTGGGATTGGTCAGTGGCAAGACGGAGCGGAACACCGATGTGTCCTTCACGATCGACGATGGCACCGGCCGCCTCGATTTCATCAGATGGGTCAATGATGGTGCTGATTCTGCTGAAACCGCTGCTGTTCAGAATGGAATGTATGTTTCTGTCATTGGTAGCCTCAAGGGGCTTCAGGAGAGGAAGCGTGCTACTGCTTTCGCTATCAGGCCTGTAACTGATTATAATGAGGTCACACTGCATTTCA TTCAGTGCGTGCGAATGCATTTAGAGAA CACCAAATCACAGATTGGTAGCCCTGCAAAAACATA TTCTG CCATGGGATCCTCATCTTCCAATGGCTTCAGTGAAATGACCACTCCGACCTCTGTGAAATCCAACCCGGCACCAGTGCTCAGT GTAACAAATGGATCAAAAACTGAT TTGAACACAGAAGT GCTGAATGTTTTCCGCGA ACCAGCAAACGT CGAGAGCGAGCA TGGTGTGC ACA TTGATGAAATCGTGAAGCGCTTCAGGCTA CCGGAGGCCAAGATCAAGGTAGCTATTGATTACCTCGCTGACATTGGGCACATATACTCAACAATCGACGAGTCTCACTACAAGTCAGCGTTCAATGAATAAAGGGGATTGAAGCCTCAGTTACTTACTAGTATGTATCCTCTAGCCTCGAAGCTGGCTGCAGCTGAAACTGAAGAACAATCGAGATGCTTCATGTTTGCTTGTCATACTAACCAGTGTGCGTTTGTTTTGCTCCATCCAGTGAAATTACATGTAACCGTATCTGTATTACGAGTAGCACATATCGAGTGACAAAACATATAATATATGTATGTTTGTTGTT ] [+] EMBL OSA278822 [ caACTCGATCTAACTCCAAATCCCATCAACCCCGCCGCCGCCGCCGCCGCCGCCACCACCGCGAGACGCGAGAGGAGACTGAAAGAAAGATTC AGAGAGAGAGAGAGTAAGCATGATGTCCTTCAGCCAGCCCGACGCCTTCTCGCCGTCGCAGTTCACCTCCTCCCAGAATGCCGCCGCCGACTCTACCACCCCTTCCAAGAGCCGGGGCGCATCGAGCACCATGCCGCTCACCGTGAAGCAGATCTCTGAAGCGCAGCAATCTGGCATCACCGGGGAGAAGGGCGCTCCCTTCGTCGTCGACGGCGTCGAGACAGCCAACGTTAGGCTTGTGGGATTGGTCAGTGGCAAGACGGAGCGGAACACCGATGTGTCCTTCACGATCGACGATGGCACCGGCCGCCTCGATTTCATCAGATGGGTCAATGATGGTGCTGATTCTGCTGAAACCGCTGCTGTTCAGAATGGAATGTATGTTTCTGTCATTGGTAGCCTCAAGGGGCTTCAGGAGAGGAAGCGTGCTACTGCTTTCGCTATCAGGCCTGTAACTGATTATAATGAGGTCACACTGCATTTCA TTCAGTGCGTGCGAATGCATTTAGAGAA CACCAAATCACAGATTGGTAGCCCTGCAAAAACATA TTCTG CCATGGGATCCTCATCTTCCAATGGCTTCAGTGAAATGACCACTCCGACCTCTGTGAAATCCAACCCGGCACCAGTGCTCAGT GTAACAAATGGATCAAAAACTGAT TTGAACACAGAGGT GCTGAATGTTTTCCGCGA ACCAGCAAACGT CGAGAGCGAGCA TGGTGTGC ACA TTGATGAAATCGTGAAGCGCTTCAGGCTA CCGGAGGCCAAGATCAAGGTAGCTATTGATTACCTCGCTGACATTGGGCACATATACTCAACAATCGACGAGTCTCACTACAAGTCAGCGTTCAATGAATAAAGGGGATTGAAGCCTCAGTTACTTACTAGTATGTATCCTCTAGCCTCGAAGCTGGCTGCAGCTGAAACTGAAGAACAATCGAGATGCTTCATGTTTGCTTGTCATACTAACCAGTGTGCGTTTGTTTTGCTCCATCCAGTGAAATTACATGTAACCGTATCTGTATTACGAGTAGCACATATCGAGTGACAAAACATATAATATATGTATGTTTGTTGTTTTGCAGCATCAGCATTATTTGGACTGTAACATGCTTGATTGATCTCTTTGGATGCAGTTAATTTCATTGTGATATTAACTCACGCATCATCGATCGATCGTGTGTTTTTTGGTAGCTAGATGGTCCAATCACAATAATCT] [+] EMBL AB037145 [ TCGATCTAACTCCAAATCCCATCAACCCCGCCGCCGCCGCCGCCGCCGCCACCACCGCGAGACGCGAGAGGAGAGTGAAAGAAAGATTCAGAGAGAGAGAGAGAGTAAGCATGATGTCCTTCAGCCAGCCCGACGCCTTCTCGCCGTCGCAGTTCACCTCCTCCCAGAATGCCGCCGCCGACTCTACCACCCCTTCCAAGAGCCGGGGCGCATCGAGCACCATGCCGCTCACCGTGAAGCAGATCTCTGAAGCGCAGCAATCTGGCATCACCGGGGAGAAGGGCGCTCCCTTCGTCGTCGACGGCGTCGAGACAGCCAACGTTAGGCTTGTGGGATTGGTCAGTGGCAAGACGGAGCGGAACACCGATGTGTCCTTCATGATCGACGATGGCACCGGCCGCCTCGATTTCATCAGATGGGTCAATGATGGTGCTGATTCTGCTGAAACCGCTGCTGTTCAGAATGGAATGTATGTTTCTGTCATTGGTAGCCTCAAGGGGCTTCAGGAGAGGAAGCGTGCTACTGCTTTCGCTATCAGGCCTGTAACTGATTATAATGAGGTCACACTGCATTTCA TTCAGTGCGTGCGAATGCATTTAGAGAA CACCAAATCACAGATTGGTAGCCCTGCAAAAACATA TTCTG CCATGGGATCCTCATCTTCCAATGGCTTCAGTGAAATGACCACTCCGACCTCTGTGAAATCCAACCCGGCACCAGTGCTCAGT GTAACAAATGGATCAAAAACTGAT TTGAACACAGAAGT GCTGAATGTTTTCCGCGA ACCAGCAAACGT CGAGAGCGAGCA TGGTGTGC ACA TTGATGAAATCGTGAAGCGCCTCAGGCTA CCGGAGGCCAAGATCAAGGTAGCTATTGATTACCTCGCTGACATTGGGCACATATACTCAACAATCGACGAGTCTCACTACAAGTCAGCGTTCAATGAATAAAGGGGATTGAAGCCTCAGTTACTTACTAGTATGTATCCTCTAGCCTCGAAGCTGGCTGCAGCTGAAACTGAAGAACAATCGAGATGCTTCATGTTTGCTTGTCATACTAACCAGTGTGCGTTTGTTTTGCTCCATCCAGTGAAATTACATGTAACCGTATCTGTATTACGAGTAGCACATATCGAGTGACAAAACATATAATCTATGTATGTTTGTTGTTTTGCAGCAaaaaaaa ] [+] EMBL AU183932 [ CATCAACCCCGCCGCCGCCGCCGCCGCCGCCACCACCGCGAGACGCGAGAGGAGAGTGAAAGAAAGATTCAGAGAGAGAGAGAGAGTAAGCATGATGTCCTTCAGCCAGCCCGACGCCTTCTCGCCGTCGCAGTTCACCTCCTCCCAGAATGCCGCCGCCGACTCTACCACCCCTTCCAAGAGCCGGGGCGCATCGAGCACCATGCCGCTCACCGTGAAGCAGATCTCTGAAGCGCAGCAATCTGGCATCACCGGGGAGAAGGGCGCTCCCTTCGTCGTCGACGGCGTCGAGACAGCCAACGTTAGGCTTGTGGGATTGGTCAGTGGCAAGACGGAGCGGAACACCGATGTGTCCTTCACGATCGACGATGGCACCGGCCGCCTCGATTTCATCAGATGGGTCAATGATGGTGCTGATTCTGCTGAA ] [+] EMBL CA756655 [ AGCAATCTGGCACCACCGGGGAGAAGGGCGCTCCCTTCGTCGTCGACGGCGTCGAGACAGCCAACGTTAGGCTTGTGGGATTGGTCAGTGGCAAGACGGAGCGGAACACCGATGTGTCCTTCACGATCGACGATGGCACCGGCCGCCTCGATTTCATCAGATGGGTCAATGATGGTGCTGATTCTGCTGAAACCGCTGCTGTTCAGAATGGAATGTATGTTTCTGTCATTGGTAGCCTCAAGGGGCTTCAGGAGAGGAAGCGTGCTACTGCTTTCGCTATCAGGCCTGTAACTGATTATAATGAGGTCACACTGCATTTCA TTCAGTGCGTGCGAATGCATTTAGAGAA CACCAAATCACAGATTGGTGGCCCTGCAAAAACATA TTCTG CCATGGGATCCTCATCTTCCAATGGCTTCAGTGAAATGACCACTCCNACCTCCGTGAAATCCAACCCGGCACCAGTGCTCAGT GTAACAAATGGATCAAAAACTGAT TTGAACACAGAGGT GCTGAATGTTTTCCGCGA ACCAGCANACGT CGAGAGCGAGCA TGGTGTGC ACA TTGATGAAATCGTGAAGCGCTTCAGGCTA CCGGAGGCCAAGATCAAGGTAGCTATTGATTACCTCGCTTACATTGGGC ] [+] EMBL AU030219 [ ATGAGNTCACACTGCATTTCATTTCAGTGCGTGCGAATGCATTTAGAGAACCACCAAATCACAGATTGGTANCCCTGCAAAAACATATTTCTGCCCATGGGATCCTCATCTTCCAATGGCTTCAGTGAAATGACCACTCCGACCTCTNTGAAATCCAACCCGGCACCAGTGCTCAGT GTAACAAATGGATCAAAAACTGAT TTGAACACAGAAGT GCTGAATGTTTTCCGCGA ACCAGCAAACGT CGAGAGCGAGCA TGGTGTGC ACA TTGATGAAATCGTGAAGCGCTTCAGGCTA CCGGAGGCCAAGATCAAGGTAGCTATTGATTACCTCGCTGACATTGGGCACATATACTCAACAATCGACGAGTCTCACTACAAGTCAGCGTTCAATGAATAAAGGGGATTGAAGCCTCAGTTACTTACTAGTATGTATCCTCTAGCCTCGAAGCTGGCTGCAGCTGAAACTGAAGAACAATCGAGATGCTTCATGTTTGCTTGTCATACTAACCAGTGTGCGTTTGTTTTGCTCCATCCAGTGAAATTACATGTAACCGTATCTGTATTACGAGTAGCACATATCGAGTGACAAAACATATAATATATGTATGTTTGTTGTTTTGCAGCAaaaaa ] [+] EMBL BI796818 [ GCTCAGTGGTAACAAATGGATCGAAAACTGATGTTGAACACAGAGGTGGCTGAATGTTTTCC CGATACC TCCAACGTCCGAGAGCGAGCATTGGTGTGCAACATTTGATGAAATCGTGAAGCGCTTCAGGCTACCCGGAGGCCAAGATCAAGGTAGCTATTGATTACCTCGCTGACATTGGGCACATATACTCAAC ATCGACGAGTCTCACTACAAGTCAGCGTTCAATGAATAAAGGGGATTGAAGCCTCAGTTACTTACTAGTATGTATCCTCTAGCCTCGAAGCTGGCTGCAGCTGAAACTGAAGAACCATCGAGATGCTTCATGTTTGCTTGTCATACTAACCAGTGTGCGTTTGTTTTGCTCCATCCAGTGAAATTACATGTAACCGTATCTGTATTACGAGTAGCACATATCGAGTGAC AAACATATAATATATGTATGTTTGTTGTTTTGCAGCATCAGCATTAaaaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||