cluster # 10817

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Oryza sativa
cluster # 10817 cluster # 10817 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10817#0 length = 1090 sequences # 8
consensusID : consensus_10817#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1090
fasta sequence
                              [CAGCAACGCCCACGAGATCGGCCTCAGCGTGTTCGACGGCATCGCCGA-GTGGCTCGTCGACGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGGCGCGT-ACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAGGTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGGCAACTTCACCACGGAGGTGG-AGGCGGAGCTGAAGGCGACCAGCCTGGTGGAGTTCACCGGCGACGGCCGG-AACAAGACCGTGTCGC-TGGAGGCGAAGCA-GG-AGACGAAGACGCTGATCCGGGCGGGCGACACGCGGAAGGTGATCGGCAGGGTGGAGAGGGAGGCCAAGTACCCGCTGTCGCTCTTCGCGGAGACCGAGGACGGCGAGAACGGCACGTCCGTCGTCACGGTGAGCCTCACCCACGGCCTCAGCGTGGAGACGGAGGTCGAGA-CGAAGGCCCTCGAGAGCAAGGAGAAGCTCGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGGGTCGGTGACGACGACCCAGGCGTACCGGTTCAGCGACGACGAG-CGGGAGTACGAGCGGGCGATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGT-CACCGAGAGC-TTCAGCGCCC-T-GGCCG-CCGCAGCGGCGGACGCTCGCCG-CCGCCGGTTCCACG-CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAATTTTGGTTGTGTTTGTCTTAATAAAAACGAAATAAAGCTGGAAATTGCAGATTA]

[+] EMBL AK101858             [CAGCAACGCCCACGAGATCGGCCTCAGCGTGTTCGACGGCATCGCCGA GTGGCTCGTCGACGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGGCGCGT ACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAGGTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGGCAACTTCACCACGGAGGTGG AGGCGGAGCTGAAGGCGACCAGCCTGGTGGAGTTAACCGGCGACGGCCGG AACAAGACCGTGTCGC TGGAGGCGAAGCA GG AGACGAAGACGCTGATCCGGGCGGGCGACACGCGGAAGGTGATCGGCAGGGTGGAGAGGGAGGCCAAGTACCCGCTGTCGCTCTTCGCGGAGACCGAGGACGGCGAGAACGGCACGTCCGTCGTCACGGTGAGCCTCACCCACGGCCTCAGCGTGGAGACGGAGGTCGAGA CGAAGGCCCTCGAGAGCAAGGAGAAGCTCGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGGGTCGGTGACGACGACCCAGGCGTACCGGTTCAGCGACGACGAG CGGGAGTACGAGCGGGCGATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGT CACCGAGAGC TTCAGCGCCC T GGCCG CCGCAGCGGCGGACGCTCGCCG CCGCCGGTTCCACG CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAATTTTGGTTGTGTTTGTCTTAATAAAAACGAAATAAAGCTGGAAATTGCA     ]
[+] EMBL AK105661             [CAGCAACGCCCACGAGATCGGCCTCAGCGTGTTCGACGGCATCGCCGA GTGGCTCGTCGACGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGGCGCGT ACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAGGTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGGCAACTTCACCACGGAGGTGG AGGCGGAGCTGAAGGCGACCAGCCTGGTGGAGTTCACCGGCGACGGCCGG AACAAGACCGTGTCGC TGGAGGCGAAGCA GG AGACGAAGACGCTGATCCGGGCGGGCGACACGCGGAAGGTGATCGGCAGGGTGGAGAGGGAGGCCAAGTACCCGCTGTCGCTCTTCGCGGAGACCGAGGACGGCGAGAACGGCACGTCCGTCGTCACGGTGAGCCTCACCCACGGCCTCAGCGTGGAGACGGAGGTCGAGA CGAAGGCCCTCGAGAGCAAGGAGAAGCTCGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGGGTCGGTGACGACGACCCAGGCGTACCGGTTCAGCGACGACGAG CGGGAGTACGAGCGGGCGATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGT CACCGAGAGC TTCAGCGCCC T GGCCG CCGCAGCGGCGGACGCTCGCCG CCGCCGGTTCCACG CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAATTTTGGTTGTGTCTGTCTTAATAAAAACGAAATAAAGCTGGAA           ]
[+] EMBL AU065635             [                     CCTCAGCGTGTTCGACGGCATCG CGANNTGGCTCGTCGACGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGG G GTAACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAGGTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGGCAACTTCACCACGGAGGTGGAAGGCGGACTTGAAGGCGACCANCCTGGTGGAGTTCACCGGCGACGGCCGG AACAAGACNGTGTCGCTTGGAGGCGAA CA GGTAGACG ANACGCTTATCNGGGCGGGCGANACcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU065644             [                     CCTCAGCGTGTTCGACGGCATCG CGANGTGGCTCGTCGACGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGG G GTAACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAGGTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGGCAACTTCACCACGGAGGTGG ANGCGGA CTGAAGGC NCCAGCCTGGTGGAGTTCANCGGCGACGGCCGGAAACAAGACCGTGTCGC TGGAGGCGAA CAGGG AGACGAAGACGCTGATCCGGGCGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB665189             [                                                                                                                                                                                                                                                                              GCTGAAGGCGACCAGCCTGGTGGAGTTCACCGGCGACGGCCGG AACAAGACCGTGTCGC TGGAGGCGAAGCA GG AGACGAAGACGCTGATCCGGGCGGGCGACACGCGGAAGGTGATCGGCAGGGTGGAGAGGGAGGCCAAGTACCCGCTGTCGCTCTTCGCGGAGACCGAGGACGGCGAGAACGGCACGTCCGTCGTCACGGTGAGCCTCACCCACGGCCTCAGCGTGGAGACGGAGGTCGAGA CGAAGGCCCTCGAGAGCAAGGAGAAGCTCGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGGGTCGGTGACGACGACCCAGGCGTACCGGTTCAGCGACGACGAG CGGGAGTACGAGCGGGCGATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGT CACCGAGAGC TTCAGCGCCC T GGCCG CCGCAGCGGCGGACGCTCGCCG CCGCCGGTTCCACG CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAATTTTGGTTGTGTTTGTCTTAGTAAAAACGAAATAAAGCTGGAAATTGCAGATTA]
[+] EMBL AU030174             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              acCGGCGAGAACGGCACNTCCGTCGTCACGTTGAGCTTCACCCACGGCCTCAGCNTGGAGACGGAGGTCGAGACCGAAGNCCCTCGAGAGCAAGGAGAAGCTCGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGGNTCGGTGACGACGACCCAGGCGTACCGNTTCAGCGACGACGAGCCGGGANTACGAGCGGGCGATCGACGTCNTGGACGGCGCCGTGCTCAGCGACAACGTCCACCGAGAGC TTCAGCGCCN TGGGCCG CCGCAGCGGCGGACGCTCGCCG CCGCCGGTTCCACG CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTNCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAAaaaa                                                  ]
[-] EMBL CB637485             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccACGAG CGGGAGCACGAGCGGGCGATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGT CACCGAGAGC TTCAGCGCCC T GGCCG CCGCAGCGGCGGACGCTCGCCG CCGCCGGTTCCACG CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAATTTTGGTTGTGTTTGTCTTAATAAAAACGAAATAAAGCTGGAAAAAGCAG    ]
[+] EMBL AU030203             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGCTTTCAGCGCCCNT GGCCGCCCGCAGCGGCGGACGNTCGCCGCCCGCCGGTTCCACGCCCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTNCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCNGTTCAAAaaaa                                                  ]




>consensus_10817#0
CAGCAACGCCCACGAGATCGGCCTCAGCGTGTTCGACGGCATCGCCGAGTGGCTCGTCGA
CGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGGCGC
GTACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAG
GTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGG
CAACTTCACCACGGAGGTGGAGGCGGAGCTGAAGGCGACCAGCCTGGTGGAGTTCACCGG
CGACGGCCGGAACAAGACCGTGTCGCTGGAGGCGAAGCAGGAGACGAAGACGCTGATCCG
GGCGGGCGACACGCGGAAGGTGATCGGCAGGGTGGAGAGGGAGGCCAAGTACCCGCTGTC
GCTCTTCGCGGAGACCGAGGACGGCGAGAACGGCACGTCCGTCGTCACGGTGAGCCTCAC
CCACGGCCTCAGCGTGGAGACGGAGGTCGAGACGAAGGCCCTCGAGAGCAAGGAGAAGCT
CGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGG
GTCGGTGACGACGACCCAGGCGTACCGGTTCAGCGACGACGAGCGGGAGTACGAGCGGGC
GATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGTCACCGAGAGCTTCAGCGCCCT
GGCCGCCGCAGCGGCGGACGCTCGCCGCCGCCGGTTCCACGCCGGCATTGCTGCGTTGTA
AGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATC
CAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCG
ACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAG
CGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCT
GCTTTTGCAGTTCAAATTTTGGTTGTGTTTGTCTTAATAAAAACGAAATAAAGCTGGAAA
TTGCAGATTA
clustalw multiple alignements is not computed in this case