These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10817#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1090 fasta sequence [CAGCAACGCCCACGAGATCGGCCTCAGCGTGTTCGACGGCATCGCCGA-GTGGCTCGTCGACGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGGCGCGT-ACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAGGTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGGCAACTTCACCACGGAGGTGG-AGGCGGAGCTGAAGGCGACCAGCCTGGTGGAGTTCACCGGCGACGGCCGG-AACAAGACCGTGTCGC-TGGAGGCGAAGCA-GG-AGACGAAGACGCTGATCCGGGCGGGCGACACGCGGAAGGTGATCGGCAGGGTGGAGAGGGAGGCCAAGTACCCGCTGTCGCTCTTCGCGGAGACCGAGGACGGCGAGAACGGCACGTCCGTCGTCACGGTGAGCCTCACCCACGGCCTCAGCGTGGAGACGGAGGTCGAGA-CGAAGGCCCTCGAGAGCAAGGAGAAGCTCGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGGGTCGGTGACGACGACCCAGGCGTACCGGTTCAGCGACGACGAG-CGGGAGTACGAGCGGGCGATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGT-CACCGAGAGC-TTCAGCGCCC-T-GGCCG-CCGCAGCGGCGGACGCTCGCCG-CCGCCGGTTCCACG-CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAATTTTGGTTGTGTTTGTCTTAATAAAAACGAAATAAAGCTGGAAATTGCAGATTA] [+] EMBL AK101858 [CAGCAACGCCCACGAGATCGGCCTCAGCGTGTTCGACGGCATCGCCGA GTGGCTCGTCGACGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGGCGCGT ACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAGGTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGGCAACTTCACCACGGAGGTGG AGGCGGAGCTGAAGGCGACCAGCCTGGTGGAGTTAACCGGCGACGGCCGG AACAAGACCGTGTCGC TGGAGGCGAAGCA GG AGACGAAGACGCTGATCCGGGCGGGCGACACGCGGAAGGTGATCGGCAGGGTGGAGAGGGAGGCCAAGTACCCGCTGTCGCTCTTCGCGGAGACCGAGGACGGCGAGAACGGCACGTCCGTCGTCACGGTGAGCCTCACCCACGGCCTCAGCGTGGAGACGGAGGTCGAGA CGAAGGCCCTCGAGAGCAAGGAGAAGCTCGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGGGTCGGTGACGACGACCCAGGCGTACCGGTTCAGCGACGACGAG CGGGAGTACGAGCGGGCGATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGT CACCGAGAGC TTCAGCGCCC T GGCCG CCGCAGCGGCGGACGCTCGCCG CCGCCGGTTCCACG CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAATTTTGGTTGTGTTTGTCTTAATAAAAACGAAATAAAGCTGGAAATTGCA ] [+] EMBL AK105661 [CAGCAACGCCCACGAGATCGGCCTCAGCGTGTTCGACGGCATCGCCGA GTGGCTCGTCGACGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGGCGCGT ACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAGGTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGGCAACTTCACCACGGAGGTGG AGGCGGAGCTGAAGGCGACCAGCCTGGTGGAGTTCACCGGCGACGGCCGG AACAAGACCGTGTCGC TGGAGGCGAAGCA GG AGACGAAGACGCTGATCCGGGCGGGCGACACGCGGAAGGTGATCGGCAGGGTGGAGAGGGAGGCCAAGTACCCGCTGTCGCTCTTCGCGGAGACCGAGGACGGCGAGAACGGCACGTCCGTCGTCACGGTGAGCCTCACCCACGGCCTCAGCGTGGAGACGGAGGTCGAGA CGAAGGCCCTCGAGAGCAAGGAGAAGCTCGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGGGTCGGTGACGACGACCCAGGCGTACCGGTTCAGCGACGACGAG CGGGAGTACGAGCGGGCGATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGT CACCGAGAGC TTCAGCGCCC T GGCCG CCGCAGCGGCGGACGCTCGCCG CCGCCGGTTCCACG CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAATTTTGGTTGTGTCTGTCTTAATAAAAACGAAATAAAGCTGGAA ] [+] EMBL AU065635 [ CCTCAGCGTGTTCGACGGCATCG CGANNTGGCTCGTCGACGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGG G GTAACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAGGTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGGCAACTTCACCACGGAGGTGGAAGGCGGACTTGAAGGCGACCANCCTGGTGGAGTTCACCGGCGACGGCCGG AACAAGACNGTGTCGCTTGGAGGCGAA CA GGTAGACG ANACGCTTATCNGGGCGGGCGANACcc ] [+] EMBL AU065644 [ CCTCAGCGTGTTCGACGGCATCG CGANGTGGCTCGTCGACGCCAACCTGCACCTCTGGCTGGACCCCAGCACGTCGGACGTGCACGCCGCGCTCGG G GTAACCAGACGCCGCGCCTGAAAATCTCACGCCACTACTCGACGCGGCTGCTCGAGGGCAGGTTCAAGATCAAGGCCAAGAGGAAGTCCTCCTTCAGCGGCTGGGTCAAGTCCTCGTTCGGCAACTTCACCACGGAGGTGG ANGCGGA CTGAAGGC NCCAGCCTGGTGGAGTTCANCGGCGACGGCCGGAAACAAGACCGTGTCGC TGGAGGCGAA CAGGG AGACGAAGACGCTGATCCGGGCGGGCG ] [-] EMBL CB665189 [ GCTGAAGGCGACCAGCCTGGTGGAGTTCACCGGCGACGGCCGG AACAAGACCGTGTCGC TGGAGGCGAAGCA GG AGACGAAGACGCTGATCCGGGCGGGCGACACGCGGAAGGTGATCGGCAGGGTGGAGAGGGAGGCCAAGTACCCGCTGTCGCTCTTCGCGGAGACCGAGGACGGCGAGAACGGCACGTCCGTCGTCACGGTGAGCCTCACCCACGGCCTCAGCGTGGAGACGGAGGTCGAGA CGAAGGCCCTCGAGAGCAAGGAGAAGCTCGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGGGTCGGTGACGACGACCCAGGCGTACCGGTTCAGCGACGACGAG CGGGAGTACGAGCGGGCGATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGT CACCGAGAGC TTCAGCGCCC T GGCCG CCGCAGCGGCGGACGCTCGCCG CCGCCGGTTCCACG CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAATTTTGGTTGTGTTTGTCTTAGTAAAAACGAAATAAAGCTGGAAATTGCAGATTA] [+] EMBL AU030174 [ acCGGCGAGAACGGCACNTCCGTCGTCACGTTGAGCTTCACCCACGGCCTCAGCNTGGAGACGGAGGTCGAGACCGAAGNCCCTCGAGAGCAAGGAGAAGCTCGATGACGCGCAGGCCGCGCAAGGGTGGATGGTGCTCCTGGACCACGACGTGCTCAACGGNTCGGTGACGACGACCCAGGCGTACCGNTTCAGCGACGACGAGCCGGGANTACGAGCGGGCGATCGACGTCNTGGACGGCGCCGTGCTCAGCGACAACGTCCACCGAGAGC TTCAGCGCCN TGGGCCG CCGCAGCGGCGGACGCTCGCCG CCGCCGGTTCCACG CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTNCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAAaaaa ] [-] EMBL CB637485 [ ccACGAG CGGGAGCACGAGCGGGCGATCGACGTCGTGGACGGCGCCGTGCTCAGCGACAACGT CACCGAGAGC TTCAGCGCCC T GGCCG CCGCAGCGGCGGACGCTCGCCG CCGCCGGTTCCACG CCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTGCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCAGTTCAAATTTTGGTTGTGTTTGTCTTAATAAAAACGAAATAAAGCTGGAAAAAGCAG ] [+] EMBL AU030203 [ GAGCTTTCAGCGCCCNT GGCCGCCCGCAGCGGCGGACGNTCGCCGCCCGCCGGTTCCACGCCCGGCATTGCTGCGTTGTAAGGCTACCTTGGATTNCCGTGGGAGTTGAGCTGTTTCGTGTCATCGATGGCTACGGAATCCAGGTGAAATTCGTCAGTTCGAAGAATTCTTATGTGCAGGATTCGTTTCCGACCGCATCGACGTGACCAAGACTATTGCTTTTCTTCAGAGGTAAATTGTGCACTGTAATTTGTATTTAGCGTATAGTTTCTGTAATCTGTATTATGTATGCAATTTTGTCGGTGTGAATCGTCGTTTCTGCTTTTGCNGTTCAAAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||