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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10823#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2072 fasta sequence
[CTTAGACAAGAAGCACCAAATAAAAAGTGGCCAGCAGCTTCTAAATCTAAAAAAGAGTGAAAGCGGCACTGCTGTTGAGACTTACAAGTATGATGAGGCTGTTAGCTTGAAGAAATTTTACTTGGCAATCATTATGCATGAATATCCCTTTAGTATTGTTGAGCATGAGTACTTTGTGGATTTTATTAAGTCATTGCACCCTACCTTTCCAATCAAAAGTCGCATAACTGTTAGGAAACATATATTGGATATGTTTTTGGATGAGAAGAAGAAAATGTATGAGTACTTTAAAACTCTTGCATGCCGCTTTAGTACAACCATGGACATGTGGACCTCAAATCAAAATAAAGGTTATATGTGCATCACTGTGCATTGGATAGATGATACGTGGTGCATGCAAAAGAGAATTATAAAGTTTATGCATGTAGAGGGTCATCACTCAGGGAAAAACTTGTGCAAAGAGTTCTATGATAGTGTACTGGATTGGAACCTTGATAGGAAATTGCTTGCACTTACTTTGGACAATGCATCTGCCAATGATGTATGTGCTAGGGGTTTAGTAGAAAAACTGAATGATATACAACCCTTGGTTTGTGAGGGGATCTTTTTCCATGTGAGATGTTTGAATCATATTTTCAATCTTGTTGCTCAAGATGGGTTGAAGCAAATTTCATCTAGTGTTTCAAATATTAGAAACACAATTTCAATTTTGAACTCCCCACTGCAGTGGTCAGAATTCATGAAGTGTGCTTCTGAGTGTGATGGTTTAGACACTACTTGTGGGCTGTCTTTGGATGTTCCAACAAGGTGGAATTCCACATATATCATGTTAAAGCAAGCTATTCACTATAGAAATGCTTTTAATAGGCTCTTTCTTTGTCATAGAAGCAAATATCATAAATGTGCCCCAAAAGATGATGATTAGATTATGGCAAAGTCATTGTGCATATGCTTGAAGAGATTTTATGATTCTACTTTGATCTTCTCTGGCATTAGTTATCCAACTGCAAATCTGTTTTTTTAGAAAATTCTGTCAAATTAAGATGGCAGTAGAAGAATGGTGCCGTAGTTCTAATACAATCATAGCAACTATGGGCAAGTCAATGAAACCTAAGTATGATAAATATTGGGAGAAGTCCAATATGGCTCTTTCTGAAGCTTGCTTGCTTGATCCTAGGTTCAAGAGAACACTTCTTGAGTATTATGCAGATAAGGTTTATGGTGTGGTAGCCCCAAAACACATGGCGGATTTCATGGTTGTTATTAATAAGCTATTTGATACTTATGCATCTAGTCAAGCAAGTTCAAAGAGTCCAGCAGCTACAAATGTGCAGAATAATCTTTTAGTGAGTAAAGACTATGATGGGGAGAGCGATGATGAGCTTGATGCAGATGTTCAACAATACTTGCGTGCTAGTACTGCCCCTGGAATAGGCACTAAGAGTGAGTTAGAAGTTTACTTGGAACAGCCACTATTGGAATGGTACACATCAGACAAAACCACATTTAATATTTTGCATTGGTGGTCACTCAAGCAACATGAGTTTCCTATTCTCAGTTTCTCACTAGACTTGCTCGTGATGTTCTGGCTATTCAAGTATCAACTATAGCTTCAGAATCTGCATTCAGTGTCGGTGGCCGTGTTATTGATCCATTCCGTAGCAGTCTAGACCCTGAAATTGTGCAAGCTCTGATTTGCACCAAAGATTGGACTGCAGCATCAAGAAAAGGTGGAAATGTGGTTGGGTCTATCTTACTGAGAAGGACATGGAGAACCTGGAGCAGAACTTCTGTGCCATGTTGTCCTTGGCTAATGGAACAGAGCAAGAGACAGAGACAGTGGAATGTTCTAATGAGGATGGCATTGCGCCAATGGATGTTTGAAGAAAATGTTGGTCAATTTAATTTTCAAGTTACATCTAATTTCAAGTTTCCATTTCAAATTAGTGTACTCCTGCTGCACAAGTGGATGAGATATGTTTTGTGATGAACCATGTACTGATGTGTTTTGTGATTGAACTATGTTTTGTGATGAACTATGTATTTATAGTGTGATGTGTTTTGTGATTGAA]
[+] EMBL AK064475 [CTTAGACAAGAAGCACCAAATAAAAAGTGGCCAGCAGCTTCTAAATCTAAAAAAGAGTGAAAGCGGCACTGCTGTTGAGACTTACAAGTATGATGAGGCTGTTAGCTTGAAGAAATTTTACTTGGCAATCATTATGCATGAATATCCCTTTAGTATTGTTGAGCATGAGTACTTTGTGGATTTTATTAAGTCATTGCACCCTACCTTTCCAATCAAAAGTCGCATAACTGTTAGGAAACATATATTGGATATGTTTTTGGATGAGAAGAAGAAAATGTATGAGTACTTTAAAACTCTTGCATGCCGCTTTAGTACAACCATGGACATGTGGACCTCAAATCAAAATAAAGGTTATATGTGCATCACTGTGCATTGGATAGATGATACGTGGTGCATGCAAAAGAGAATTATAAAGTTTATGCATGTAGAGGGTCATCACTCAGGGAAAAACTTGTGCAAAGAGTTCTATGATAGTGTACTGGATTGGAACCTTGATAGGAAATTGCTTGCACTTACTTTGGACAATGCATCTGCCAATGATGTATGTGCTAGGGGTTTAGTAGAAAAACTGAATGATATACAACCCTTGGTTTGTGAGGGGATCTTTTTCCATGTGAGATGTTTGAATCATATTTTCAATCTTGTTGCTCAAGATGGGTTGAAGCAAATTTCATCTAGTGTTTCAAATATTAGAAACACAATTTCAATTTTGAACTCCCCACTGCAGTGGTCAGAATTCATGAAGTGTGCTTCTGAGTGTGATGGTTTAGACACTACTTGTGGGCTGTCTTTGGATGTTCCAACAAGGTGGAATTCCACATATATCATGTTAAAGCAAGCTATTCACTATAGAAATGCTTTTAATAGGCTCTTTCTTTGTCATAGAAGCAAATATCATAAATGTGCCCCAAAAGATGATGATTAGATTATGGCAAAGTCATTGTGCATATGCTTGAAGAGATTTTATGATTCTACTTTGATCTTCTCTGGCATTAGTTATCCAACTGCAAATCTGTTTTTTTAGAAAATTCTGTCAAATTAAGATGGCAGTAGAAGAATGGTGCCGTAGTTCTAATACAATCATAGCAACTATGGGCAAGTCAATGAAACCTAAGTATGATAAATATTGGGAGAAGTCCAATATGGCTCTTTCTGAAGCTTGCTTGCTTGATCCTAGGTTCAAGAGAACACTTCTTGAGTATTATGCAGATAAGGTTTATGGTGTGGTAGCCCCAAAACACATGGCGGATTTCATGGTTGTTATTAATAAGCTATTTGATACTTATGCATCTAGTCAAGCAAGTTCAAAGAGTCCAGCAGCTACAAATGTGCAGAATAATCTTTTAGTGAGTAAAGACTATGATGGGGAGAGCGATGATGAGCTTGATGCAGATGTTCAACAATACTTGCGTGCTAGTACTGCCCCTGGAATAGGCACTAAGAGTGAGTTAGAAGTTTACTTGGAACAGCCACTATTGGAATGGTACACATCAGACAAAACCACATTTAATATTTTGCATTGGTGGTCACTCAAGCAACATGAGTTTCCTATTCTCAGTTTCTCACTAGACTTGCTCGTGATGTTCTGGCTATTCAAGTATCAACTATAGCTTCAGAATCTGCATTCAGTGTCGGTGGCCGTGTTATTGATCCATTCCGTAGCAGTCTAGACCCTGAAATTGTGCAAGCTCTGATTTGCACCAAAGATTGGACTGCAGCATCAAGAAAAGGTGGAAATGTGGTTGGGTCTATCTTACTGAGAAGGACATGGAGAACCTGGAGCAGAACTTCTGTGCCATGTTGTCCTTGGCTAATGGAACAGAGCAAGAGACAGAGACAGTGGAATGTTCTAATGAGGATGGCATTGCGCCAATGGATGTTTGAAGAAAATGTTGGTCAATTTAATTTTCAAGTTACATCTAATTTCAAGTTTCCATTTCAAATTAGTGTACTCCTGCTGCACAAGTGGATGAGATATGTTTTGTGATGAACCATGTACTGATGTGTTTTGTGATTGAACTATGTTTTGTGATGAACTATGTATTTATAGTGTGATGTGTTTTGTGATTGAA]
[+] EMBL AU068065 [ GCCCCAAAAGATGATGATTAGATTATGGCAAAGTCATTGTGCATATGCTTGAAGAGATTTTATGATTCTACTTTGATCTTCTCTGGCATTAGTTATCCAACTGCAAATCTGTTTTTTTAGAAAATTCTGTCAAATTAAGATGGCAGTAGAAGAATGGTGCCGTAGTTCTAATACAATCATAGCAACTATGGGCAAGTCAATGAAACCTAAGTATGATAAATATTGGGAGAAGTCCAATATGGCTCTTTCTGAAGCTTGCTTGCTTGA ]
[+] EMBL AU068064 [ AGTAAAGACTATGATGGGGAGACCGATGATGAGCTTGATGCAGATGTTCAACAATACTTGCGTGCTAGTACTGCCCCTGGAATAGGCACTAAGAGTGAGTTAGAAGTTTACTTGGAACAGCCACTATTGGAATGGTACACATCAGACAAAACCACATTTAATATTTTGCATTGGTGGTCACTCAAGCAACATGAGTTTCCTATTCTCAGTTTCTCACTAGACTTGCTCGTGATGTTCTGGCTATTCAAGTATCAACTATAGCTTCAGAATCTGCATTCAGTGTCGGTGGCCGTGTTATTGATCCATTCCGTAGCAGTCTAGACCCTGAAATTGTGCAAGCTCTGATTTGCACCAAAGATTGGACTGCAGCATCAAGAAAAGGTGGAAATGTGGTTGGGTCTATCTTACTGAGAAGGACATGGAGAACCTGGAGCAGAACTTCTGTGCCATGTTGTCCTTGGCTAATGGAACAGAGCAAGAGACAGAGACAGTGGAATGTTCTAATGAGGATGGCATTGCGCCAATGGATGTTTGAAGAAAATGTTGGTCAATTTAATTTTCAAGTTACATCTAATTTCAAGTTTCCATTTCAAATTAGTGTACTCCTGCTGCACAAGTGGATGAGATATGTTTTGTGATGAACCATGTACTGATGTGTTTTGTGATTGAACTATGTTTTGTGATGAACTAaaaaaa ]
consensusID : consensus_10823#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1892 fasta sequence
[TGCTCCGCTTGATTCCCCCTTCCTCTTTCCGGCCATCCCACTGCCCCTTCCCAGCCTCCTCCTCTCGCCGCCGGCTAGAAGCGCCGATAGCTGCCGTCCTCCGTCACTTCCTGCTCCGGTCGCGTTCGTACCATCGTGTTACTCCCGTGTATGCCCGTTCCAGCCGTTCGGGACACCATGCGCACCACCTGTTTGCGGGATTGTCTAGCCAAGCTGTTGCGCCGCGGGGGCCAGCGCCAGGGCCAGAGCTGATTCTGCTGCCCCACACAGTTATCTTTCGCGCGGGGGATGACGCGGAGCCGCAACGTGAGGCAACGGAGCAAGAAAAAGCGGGTGCACGCGCTCGAGGTGGCCACGGAGCGGTGGAAGGTGCTCACCAAGGTGCTCGCCGTCGTCGACGCGCTCAAGAAGGAGGAGGAGCACGTCACCCCGCTCAAGCGCCTCGAGATCCTGCGCCCGCAGCTTGGGCTCACCAAGCCCAACAAGGTCGCCCACTTCGTGAGCCGCTCGCCGCAGCTCTTCGAGGTCTGCCGCGACAGCCGCGGCGTCATGTGGGCGGGCCTCTCGCCGCAGGCCGAGGCGCTCATCGAGGAGGAGGCGCGCCTGCTGGAGGATCACTCGCGCACGGCCGCTGAGTACGTCACCAGGCTGCTGATGATGTCGGTGGACCGTCGTCTGGCTATCGACAAGATTGCACATTTCAGGCGCGACATGGGGCTTCCTCATGATTTCAAGACACGATGGGTTCACATGTTCCCCGAGCAGTTCAGGGTGGTCAGGTTGGAGGATGGCGATTACCTGGAGCTTGTCTCTTGGAACCCAAACTGGGCAGTCACCGAGCTCGAGAAAAAGACAGCAGCATTGACTGGTGATGCAAATGCTAACGGCATTGGCAGTCCACCAGGAGAGCTCTCACTATCATTCCCCATGAAGTTCCCACCAAATTTTACAAGTTACTACAAATTCTACGGAAAAGTTCATCATTATGTGAAAAAAGGGAATACCGAGCAGTTTCAGAAGACAACATACCTATATCCTTATTCAGAGGCAAGAGGATTGACTCCTGGCTCGCCTGAATTTGATAAGAGGGCAGTTGCTGTGATGCACGAGGTACTGAACTTCACGTTGGAAAAGAGGCTGGTGATTGATCACCTCACATATTTCTGTCGTGAGTTTGTTATGCCGCAGAAGTTGATGAGGCTGCTTCTGAAGCATTATGGCATCTTTTATGTGTATGAGAGGGGGAAGCGGTTTAGCGTGTTCTTGACGAAGTCTTATGATGGGACAAAATTGATAGAGAAGTGCCCACTGGTGAGGTGGAAGGAAAAAGTTCTTCAACTTACCAGCTATAGAGGGAGGATCAAGAATCTTGGTAAATTTGCCGAGTTGTTTGATTCAGAGGACTATTTGTTTGGTAATGATGATAGTAGCAGTGCTACTGATTCTATATTGGATGTCAAAAGTGAAGATTCAGATGATATCATGGATGATGGCGCTCTTGCAGATGATACTGAGATGGATGTA-GGGGATCTAAGTGATTGTTGCATAGAGTGAATAAGTGACATCCATTAATTTAAA-GAGCAG-TTTTTGATATTTGTTCCCTAACAATCAAGCTCCAAAAGTAAATTCTTGTGATCCTAGGGCAATGGTTATATTCTCTTACTCCCTCGCTCATGGCATATTTGGATTCTTTATATTAACCCGGGGCTTAAATAGAAACTCTTGCTGATTGGATATGTACTTCTTGCTTATTGCTAAAAATATAAACCATGCGTACTTTATGTTTATGTAGATCAGTTGGTTCTTCCTTTTTTATTCACAGAAGATGATATTTGCAAAAAATTGTGCCAAAGCATTATATATTGAAGTTATGAAACGTCAAGCAAGATTTG]
[+] EMBL AK064006 [TGCTCCGCTTGATTCCCCCTTCCTCTTTCCGGCCATCCCACTGCCCCTTCCCAGCCTCCTCCTCTCGCCGCCGGCTAGAAGCGCCGATAGCTGCCGTCCTCCGTCACTTCCTGCTCCGGTCGCGTTCGTACCATCGTGTTACTCCCGTGTATGCCCGTTCCAGCCGTTCGGGACACCATGCGCACCACCTGTTTGCGGGATTGTCTAGCCAAGCTGTTGCGCCGCGGGGGCCAGCGCCAGGGCCAGAGCTGATTCTGCTGCCCCACACAGTTATCTTTCGCGCGGGGGATGACGCGGAGCCGCAACGTGAGGCAACGGAGCAAGAAAAAGCGGGTGCACGCGCTCGAGGTGGCCACGGAGCGGTGGAAGGTGCTCACCAAGGTGCTCGCCGTCGTCGACGCGCTCAAGAAGGAGGAGGAGCACGTCACCCCGCTCAAGCGCCTCGAGATCCTGCGCCCGCAGCTTGGGCTCACCAAGCCCAACAAGGTCGCCCACTTCGTGAGCCGCTCGCCGCAGCTCTTCGAGGTCTGCCGCGACAGCCGCGGCGTCATGTGGGCGGGCCTCTCGCCGCAGGCCGAGGCGCTCATCGAGGAGGAGGCGCGCCTGCTGGAGGATCACTCGCGCACGGCCGCTGAGTACGTCACCAGGCTGCTGATGATGTCGGTGGACCGTCGTCTGGCTATCGACAAGATTGCACATTTCAGGCGCGACATGGGGCTTCCTCATGATTTCAAGACACGATGGGTTCACATGTTCCCCGAGCAGTTCAGGGTGGTCAGGTTGGAGGATGGCGATTACCTGGAGCTTGTCTCTTGGAACCCAAACTGGGCAGTCACCGAGCTCGAGAAAAAGACAGCAGCATTGACTGGTGATGCAAATGCTAACGGCATTGGCAGTCCACCAGGAGAGCTCTCACTATCATTCCCCATGAAGTTCCCACCAAATTTTACAAGTTACTACAAATTCTACGGAAAAGTTCATCATTATGTGAAAAAAGGGAATACCGAGCAGTTTCAGAAGACAACATACCTATATCCTTATTCAGAGGCAAGAGGATTGACTCCTGGCTCGCCTGAATTTGATAAGAGGGCAGTTGCTGTGATGCACGAGGTACTGAACTTCACGTTGGAAAAGAGGCTGGTGATTGATCACCTCACATATTTCTGTCGTGAGTTTGTTATGCCGCAGAAGTTGATGAGGCTGCTTCTGAAGCATTATGGCATCTTTTATGTGTATGAGAGGGGGAAGCGGTTTAGCGTGTTCTTGACGAAGTCTTATGATGGGACAAAATTGATAGAGAAGTGCCCACTGGTGAGGTGGAAGGAAAAAGTTCTTCAACTTACCAGCTATAGAGGGAGGATCAAGAATCTTGGTAAATTTGCCGAGTTGTTTGATTCAGAGGACTATTTGTTTGGTAATGATGATAGTAGCAGTGCTACTGATTCTATATTGGATGTCAAAAGTGAAGATTCAGATGATATCATGGATGATGGCGCTCTTGCAGATGATACTGAGATGGATGTA GGGGATCTAAGTGATTGTTGCATAGAGTGAATAAGTGACATCCATTAATTTAAA GAGCAG TTTTTGATATTTGTTCCCTAACAATCAAGCTCCAAAAGTAAATTCTTGTGATCCTAGGGCAATGGTTATATTCTCTTACTCCCTCGCTCATGGCATATTTGGATTCTTTATATTAACCCGGGGCTTAAATAGAAACTCTTGCTGATTGGATATGTACTTCTTGCTTATTGCTAAAAATATAAACCATGCGTACTTTATGTTTATGTAGATCAGTTGGTTCTTCCTTTTTTATTCACAGAAGATGATATTTGCAAAAAATTGTGCCAAAGCATTATATATTGAAGTTATGAAACGTCAAGCAAGATTTG]
[+] EMBL CA764768 [ agggGGGCAGTCACCGAGCTCGAGAAAAAGACGGCAGCATTGACTGGTGATGCAAATGCTAACGACATTGCCAGTCCACCAGGAGAGCTCTCACTATCATTCCCCATGAAGTTCCCACCAAATTTTACAAGTTACTACAAATTCCGCGGAAAAGTTCACCATTATGTGAAAAAAGGCAATACTGAGCAGTTTCAGAAGACAACATACCTATCTCCTTATGCAGAACCAGGAGGATTGACTCCTGGCTCGCCGGAGTTTGACAAGAGGGCAGTTGCAGTGATGCATGAGATACTGAACTTCACGTTGGAAAAGAGGCTGGTGACTGATCACCTCACACATTTCCGTCGTGAGTTTGTTATGCCGCAGAAGTTGATGAGACTGCTTCTGAAGCATTATGGCATCTTTTATGTGTCTGAGAGGGGGAAGCGGTTTAGCGTATTCTTGACGGAGTCTTATGATGGGACAGAATTAATAGAGAAGTGCCCATTGGTGAGGTGGAAGGAAAAAGTCCTTCAACTTACCAGCTATAGAGGGAAGATCAAGAATCTTGGTAAATTTGCCGAGTTGTCTGATTCAGAGGACTATTTGTTTGGTAATGATGATAGTAGCGGTGCTACTGATTCTATATTGGATGTCAAAAGTGAAGATTCGGATGATATCATGGATGATGGCGCTCTTGCAGATGATACTGAGATGGATGTANGGGGATCTAAGTGATTGGTGCCTANAGTGAATAAGTGACATCGATTAATTTAAAGGAGCAGNTTTTTATTTTTTGTTCCCTAACGATCAAGCTCCAAAAGTCTATTCTTGgng ]
consensusID : consensus_10823#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 626 fasta sequence
[CCCACGCCTCCCGGCTTCCAGAAATCTGCCATTCAGTGTCCGGTGNCCGTGTTATTGATCCCATTCCGTAGCCAGTCTAGACCCTGAAATTGTGCCAAGCTCTGATTTGCCACCAAAGATTGGACTGCAGCATCAAGAAAAGGTGGAAATGTGGTTGGGTCTATCTTACTGAGAAGGACATGGAGAACCTGGAGCCAGAACTTCTGTGCCCATGTTGTCCTTGGCTAATGGAACAGAGCCAAGAGACAGAGACAGTGGAATGTTCTAATGAGGATGGCATTGCCGCCAATGGATGTTTGAAGAAAATGTTGGTCCAATTTAATTTTCCAAGTTACATCTAATTTCCAAGTTTCCATTTCAAATTAGTGTACTCCTGCTGCACAAGTGGATGAGATATGTTTTGTGATGAACCATGTACTGATGTGTTTTGTGATTGAACTATGTTTTGTGATGAACTATGTATTTATAGTGTGATGTGTTTTGTGATTGAACTAAGTACTGAAATACTGATGGACTGACGTGTCATGTGTGTTGCTGTTCTGTGATGATTAATGAACTATTGCTGTTCTGTGATGATTGATGAACTAAGTATTGATGGGCTGATGTTCAAAAAAAAAAAAAAAAAA]
[+] EMBL AU056956 [CCCACGCCTCCCGGCTTCCAGAAATCTGCCATTCAGTGTCCGGTGNCCGTGTTATTGATCCCATTCCGTAGCCAGTCTAGACCCTGAAATTGTGCCAAGCTCTGATTTGCCACCAAAGATTGGACTGCAGCATCAAGAAAAGGTGGAAATGTGGTTGGGTCTATCTTACTGAGAAGGACATGGAGAACCTGGAGCCAGAACTTCTGTGCCCATGTTGTCCTTGGCTAATGGAACAGAGCCAAGAGACAGAGACAGTGGAATGTTCTAATGAGGATGGCATTGCCGCCAATGGATGTTTGAAGAAAATGTTGGTCCAATTTAATTTTCCAAGTTACATCTAATTTCCAAGTTTCCATTTCAAATTAGTGTACTCCTGCTGCACAAGTGGATGAGATATGTTTTGTGATGAACCATGTACTGATGTGTTTTGTGATTGAACTATGTTTTGTGATGAACTATGTATTTATAGTGTGATGTGTTTTGTGATTGAACTAAGTACTGAAATACTGATGGACTGACGTGTCATGTGTGTTGCTGTTCTGTGATGATTAATGAACTATTGCTGTTCTGTGATGATTGATGAACTAAGTATTGATGGGCTGATGTTCAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10823#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 456 fasta sequence
[TGCGGCATAACAAACTCACGACAGAAATATGTGAGGTGATCAATCACCAGCCTCTTTTCCAACGTGAAGTTCAGTACCTCGTGCATCACAGCAACTGCCCTCTTATCAAATTCAGGCGAGCCAGGAGTCAATCCTCTTGCCTCTGAATAAGGATATAGGCTAATGGAACGGAACAAGAGACAGAGACAGTAGAAGCGGAATGTTCTAATGAGGATGGCATTGCGCCAATGGATGTTTGAAGAAAATGTTGGTCAATTTAATTTTCAAGTTACATCTAATTTCAAGTTTCCATTTCAAATTAGTGTACTCCTGCTGCACAAGTGGATGAGATATGTTTGAACCATGTACTGATGTGTTTTGTGATTGAACTATGTTTTGTGATGAACTATGTATTTATAGGGTGATGTGTTTTGTGATAAAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGT]
[-] EMBL CF301959 [TGCGGCATAACAAACTCACGACAGAAATATGTGAGGTGATCAATCACCAGCCTCTTTTCCAACGTGAAGTTCAGTACCTCGTGCATCACAGCAACTGCCCTCTTATCAAATTCAGGCGAGCCAGGAGTCAATCCTCTTGCCTCTGAATAAGGATATAGGCTAATGGAACGGAACAAGAGACAGAGACAGTAGAAGCGGAATGTTCTAATGAGGATGGCATTGCGCCAATGGATGTTTGAAGAAAATGTTGGTCAATTTAATTTTCAAGTTACATCTAATTTCAAGTTTCCATTTCAAATTAGTGTACTCCTGCTGCACAAGTGGATGAGATATGTTTGAACCATGTACTGATGTGTTTTGTGATTGAACTATGTTTTGTGATGAACTATGTATTTATAGGGTGATGTGTTTTGTGATAAAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGT]
[+] EMBL CF301958 [TGCGGCATAACAAACTCACGACAGAAATATGTGAGGTGATCAATCACCAGCCTCTTTTCCAACGTGAAGTTCAGTACCTCGTGCATCACAGCAACTGCCCTCTTATCAAATTCAGGCGAGCCAGGAGTCAATCCTCTTGCCTCTGAATAAGGATATAGGCTAATGGAACGGAACAAGAGACAGAGACAGTAGAAGCGGAATGTTCTAATGAGGATGGCATTGCGCCAATGGATGTTTGAAGAAAATGTTGGTCAATTTAATTTTCAAGTTACATCTAATTTCAAGTTTCCATTTCAAATTAGTGTACTCCTGCTGCACAAGTGGATGAGATATGTTTGAACCATGTACTGATGTGTTTTGTGATTGAACTATGTTTTGTGATGAACTATGTATTTATAGGGTGATGTGTTTTGTGATAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10823#0 CTTAGACAAGAAGCACCAAATAAAAAGTGGCCAGCAGCTTCTAAATCTAAAAAAGAGTGA 60
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 ------------------------------------------------------------
consensus_10823#0 AAGCGGCACTGCTGTTGAGACTTACAAGTATGATGAGGCTGTTAGCTTGAAGAAATTTTA 120
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 ------------------------------------------------------------
consensus_10823#0 CTTGGCAATCATTATGCATGAATATCCCTTTAGTATTGTTGAGCATGAGTACTTTGTGGA 180
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 ------------------------------------------------------------
consensus_10823#0 TTTTATTAAGTCATTGCACCCTACCTTTCCAATCAAAAGTCGCATAACTGTTAGGAAACA 240
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 ------------------------------------------------------------
consensus_10823#0 TATATTGGATATGTTTTTGGATGAGAAGAAGAAAATGTATGAGTACTTTAAAACTCTTGC 300
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 ------------------------------------------------------------
consensus_10823#0 ATGCCGCTTTAGTACAACCATGGACATGTGGACCTCAAATCAAAATAAAGGTTATATGTG 360
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 ---------------------------TGCTCCGCTTGATTCCCCCTTCCTCTTTCCGGC 33
consensus_10823#0 CATCACTGTGCATTGGATAGATGATACGTGGTGCATGCAAAAGAGAATTATAAAGTTTAT 420
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 CATCCCACTGCCCCTTCCCAGCCTCCTCCTCTCGCCGCCGGCTAGAAGCGCCGATAGCTG 93
consensus_10823#0 GCATGTAGAGGGTCATCACTCAGGGAAAAACTTGTGCAAAGAGTTCTATGATAGTGTACT 480
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 CCGTCCTCCGTCACTTCCTGCTCCGGTCGCGTTCGTACCATCGTGTTACTCCCGTGTATG 153
consensus_10823#0 GGATTGGAACCTTGATAGGAAATTGCTTGCACTTACTTTGGACAATGCATCTGCCAATGA 540
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 CCCGTTCCAGCCGTTCGGGACACCATGCGCACCACCTGTTTGCGGGATTGTCTAGCCAAG 213
consensus_10823#0 TGTATGTGCTAGGGGTTTAGTAGAAAAACTGAATGATATACAACCCTTGGTTTGTGAGGG 600
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 CTGTTGCGCCGCGGGGGCCAGCGCCAGGGCCAGAGCTGATTCTGCTGCCCCACACAGTTA 273
consensus_10823#0 GATCTTTTTCCATGTGAGATGTTTGAATCATATTTTCAATCTTGTTGCTCAAGATGGGTT 660
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 TCTTTCGCGCGGGGGATGACGCGGAGCCGCAACGTGAGGCAACGGAGCAAGAAAAAGCGG 333
consensus_10823#0 GAAGCAAATTTCATCTAGTGTTTCAAATATTAGAAACACAATTTCAATTTTGAACTCCCC 720
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 GTGCACGCGCTCGAGGTGGCCACGGAGCGGTGGAAGGTGCTCACCAAGGTGCTCGCCGTC 393
consensus_10823#0 ACTGCAGTGGTCAGAATTCATGAAGTGTGCTTCTGAGTGTGATGGTTTAGACACTACTTG 780
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 GTCGACGCGCTCAAGAAGGAGGAGGAGCACGTCACCCCGCTCAAGCGCCTCGAGATCCTG 453
consensus_10823#0 TGGGCTGTCTTTGGATGTTCCAACAAGGTGGAATTCCACATATATCATGTTAAAGCAAGC 840
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 CGCCCGCAGCTTGGGCTCACCAA-GCCCAACAAGGTCGCCCACTTCGTGAGCCGCTCGCC 512
consensus_10823#0 TATTCACTATAGAAATGCTTTTAATAGGCTCTTTCTTTGTCATAGAAGCAAATATCATAA 900
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 GCAGCTCTTCGAGGTCTGCCGCGACAGCCGCGGCGTCATGTGGGCGGGCCTCTCGCCGCA 572
consensus_10823#0 ATGTGCCCCAAAAGATGATGATTAGATTATGGCAAAGTCATTGTGCATATGCTTGAAGAG 960
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 GGCCGAGGCGCTCATCGAGGAGGAGGCGCGCCTGCTGGAGGATCACTCGCGCACGGCCGC 632
consensus_10823#0 ATTTTATGATTCTACTTTGATCTTCTCTGGCATTAGTTATCCAACTGCAAATCTGTTTTT 1020
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 TGAGTACGTCACCAGGCTGCTGATGATGTCGGTGGACCGTCGTCTGGCTATCGACAAGAT 692
consensus_10823#0 TTAGAAAATTCTGTCAAATTAAGATGGCAGTAGAAGAATGGTGCCGTAGTTCTAATACAA 1080
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 TGCACATTTCAGGCGCGACATGGGGCTTCCTCATGATTTCAAGACACGATGGGTTCACAT 752
consensus_10823#0 TCATAGCAACTATGGGCAAGTCAATGAAACCTAAGTATGATAAATATTGGGAGAAGTCCA 1140
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 GTTCCCCGAGCAGTTCAGGGTGGTCAGGTTGGAGGATGGCGATTACCTGGAGCTTGTCTC 812
consensus_10823#0 ATATGGCTCTTTCTGAAGCTTGCTTGCTTGATCCTAGGTTCAAGAGAACACTTCTTGAGT 1200
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 TTGGAACCCAAACTGGGCAGTCACCGAGCTCGAGAAAAAGACAGCAGCATTGACTGGTGA 872
consensus_10823#0 ATTATGCAGATAAGGTTTATGGTGTGGTAGCCCCAAAACACATGGCGGATTTCATGGTTG 1260
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 TGCAAATGCTAACGGCATTGGCAGTCCACCAGGAGAGCTCTCACTATCATTCCCCATGAA 932
consensus_10823#0 TTATTAATAAGCTATTTGATACTTATGCATCTAGTCAAGCAAGTTCAAAGAGTCCAGCAG 1320
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 GTTCCCACCAAATTTTACAAGTTACTACAAATTCTACGGAAAAGTTCATCATTATGTGAA 992
consensus_10823#0 CTACAAATGTGCAGAATAATCTTTTAGTGAGTAAAGACTATGATGGGGAGAGCGATGATG 1380
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 AAAAGGGAATACCGAGCAGTTTCAGAAGACAACATACCTATATCCTTATTCAGAGGCAAG 1052
consensus_10823#0 AGCTTGATGCAGATGTTCAACAATACTTGCGTGCTAGTACTGCCCCTGGAATAGGCACTA 1440
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 AGGATTGACTCCTGGCTCGCCTGAATTTGATAAGAGGGCAGTTGCTGTGATGCACGAGGT 1112
consensus_10823#0 AGAGTGAGTTAGAAGTTTACTTGGAACAGCCACTATTGGAATGGTACACATCAGACAAAA 1500
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 ACTGAACTTCACGTTGGAAAAGAGGCTGGTGATTGATCACCTCACATATTTCTGTCGTGA 1172
consensus_10823#0 CCACATTTAATATTTTGCATTGGTGGTCACTCAAGCAACATGAGTTTCCTATTCTCAGTT 1560
consensus_10823#2 ------------------------------------------------------------
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 GTTTGTTATGCCGCAGAAGTTGATGAGGCTGCTTCTGAAGCATTATGGCATCTTTTATGT 1232
consensus_10823#0 TCTCACTAGACTTGCTCGTGATGTTCTGGCTATTCAAGTATCAACTATAGCTTCAGAATC 1620
consensus_10823#2 --------------------------------CCCACGCCTC--CCGGCTTCCAGAAATC 26
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 GTATGAGAGGGGGAAGCGGTTTAGCGTGTTCTTGACGAAGTCTTATGATGGGACAAAATT 1292
consensus_10823#0 TGC-ATTCAGTGTC-GGTGGCCGTGTT-ATTGATCC-ATTCCGTAGC-AGTCTAGACCCT 1675
consensus_10823#2 TGCCATTCAGTGTCCGGTGNCCGTGTT-ATTGATCCCATTCCGTAGCCAGTCTAGACCCT 85
consensus_10823#3 ------------------------------------TGCGGCATAACAAACTCACGAC-- 22
consensus_10823#1 GATAGAGAAGTGCCCACTGGTGAGGTGGAAGGAAAAAGTTCTTCAACTTACCAGCTATAG 1352
* *
consensus_10823#0 GAAATTGTGC-AAGCTC-TGATTTGC--ACCAAAGATTGGACTGCAGCATCAAGAAAAGG 1731
consensus_10823#2 GAAATTGTGCCAAGCTC-TGATTTGCC-ACCAAAGATTGGACTGCAGCATCAAGAAAAGG 143
consensus_10823#3 AGAAATATGTGAGG----TGATCAATC-ACCA--GCCTCTTTTCCAACGTGAAGTTCAGT 75
consensus_10823#1 AGGGAGGATCAAGAATCTTGGTAAATTTGCCGAGTTGTTTGATTCAGAGGACTATTTGTT 1412
* ** * ** * * **
consensus_10823#0 TGGAAATGTGGTTGGGT--CTATCTTACTGAGAAGGACATGGAGAACCTGGAGC-AGAAC 1788
consensus_10823#2 TGGAAATGTGGTTGGGT--CTATCTTACTGAGAAGGACATGGAGAACCTGGAGCCAGAAC 201
consensus_10823#3 ACCTCGTGCATCACAGCAACTGCCCTCTTATCAAATTCA-GGCGAGCCAGGAGTCAATCC 134
consensus_10823#1 TGGTAATG-ATGATAGTAGCAGTGCTACTGATTC-TATATTGGATGTCAAAAGTGAAGAT 1470
** * * * * * * * ** *
consensus_10823#0 TTCTGTGCC---ATGTTGTCCTTGGCTAATGGAACAGAGC-AAGAGACAGAGACAGT--- 1841
consensus_10823#2 TTCTGTGCCC--ATGTTGTCCTTGGCTAATGGAACAGAGCCAAGAGACAGAGACAGT--- 256
consensus_10823#3 TCTTGCCTCTGAATAAGGATATAGGCTAATGGAACGGAAC-AAGAGACAGAGACAGTAGA 193
consensus_10823#1 TCAGATGATATCATGGATGATGGCGCTCTTGCAGATGATA-CTGAGATGGATGTAGGGGA 1529
* ** *** ** * ** **** ** **
consensus_10823#0 ---GGAATGTTCTAATGAGGATGGCATTGC-GCCAATGGATGTTTGAAGAAAATGTTGGT 1897
consensus_10823#2 ---GGAATGTTCTAATGAGGATGGCATTGCCGCCAATGGATGTTTGAAGAAAATGTTGGT 313
consensus_10823#3 AGCGGAATGTTCTAATGAGGATGGCATTGC-GCCAATGGATGTTTGAAGAAAATGTTGGT 252
consensus_10823#1 TCTAAGTGATTGTTGCATAGAGTGAATAAGTGACATCCATTAATTTAAAGAGCAGTT--- 1586
** * ** * ** * ** * ** ** * ***
consensus_10823#0 C-AATTTAATTTTC-AAGTTACATCTAATTTC-AAGTTTCCATTTCAAATTAGTGTACTC 1954
consensus_10823#2 CCAATTTAATTTTCCAAGTTACATCTAATTTCCAAGTTTCCATTTCAAATTAGTGTACTC 373
consensus_10823#3 C-AATTTAATTTTC-AAGTTACATCTAATTTC-AAGTTTCCATTTCAAATTAGTGTACTC 309
consensus_10823#1 ----TTTGATATTT---GTTCC--CTAACAATCAAGCTCCAAAAGTAAATTCTTGTGATC 1637
*** ** ** *** * **** *** * * * ***** *** **
consensus_10823#0 CTGCTGCACAAGTGGATGAGATATGTTTTGTGATGAACCATGTACTGATGTGTTTTGTGA 2014
consensus_10823#2 CTGCTGCACAAGTGGATGAGATATGTTTTGTGATGAACCATGTACTGATGTGTTTTGTGA 433
consensus_10823#3 CTGCTGCACAAGTGGATGAGATATGTTT------GAACCATGTACTGATGTGTTTTGTGA 363
consensus_10823#1 CTAGGGCAATGGTTATATTCTCTTACTCCCTCGCTCATGGCATATTTGGATTCTTTAT-A 1696
** *** ** * * * ** * * *** * *
consensus_10823#0 TTGAACTATGTTTTGTGATGAACTATGTATTTATAGTGTGATGTGTTTTGTGATTGAA-- 2072
consensus_10823#2 TTGAACTATGTTTTGTGATGAACTATGTATTTATAGTGTGATGTGTTTTGTGATTGAACT 493
consensus_10823#3 TTGAACTATGTTTTGTGATGAACTATGTATTTATAGGGTGATGTGTTTTGTGATAAAAAA 423
consensus_10823#1 TTAACCCGGGGCTTAAATAGAAACTCTTGCTGATTGGAT-ATGTACTTCTTGCTTATTGC 1755
** * * * ** *** * * ** * * **** ** ** *
consensus_10823#0 ------------------------------------------------------------
consensus_10823#2 AAGTACTGAAATACTGATGGACTGACGTGTCATGTGTGTT-GCTGTTCTGTGATGATTAA 552
consensus_10823#3 AAAAAAAAAAAAAACAATGTCATGCCGTTACGT--------------------------- 456
consensus_10823#1 TAAAAATATAAACCATGCGTACTTTATGTTTATGTAGATCAGTTGGTTCTTCCTTTTTTA 1815
consensus_10823#0 ------------------------------------------------------------
consensus_10823#2 TGAACTATTGCTGTTCTGTGATGATTGATGAACTAAGTATTGATGGGCTGATGTTCAAAA 612
consensus_10823#3 ------------------------------------------------------------
consensus_10823#1 TTCACAGAAGATGATATTTGCAAAAAATTGTGCCAAAGCATTATATATTGAAGTTATGAA 1875
consensus_10823#0 -----------------
consensus_10823#2 AAAAAAAAAAAAAA--- 626
consensus_10823#3 -----------------
consensus_10823#1 ACGTCAAGCAAGATTTG 1892
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||