These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10830#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 839 fasta sequence [TTTTTTTTTTTTTTTTTTAAATTTCTTAATTATAGC-GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG-CCGCCGCGC-AT-CATCTGCTTGAAC-TCGAGGAAGTCGAC-GCGGCCGTCGCCGTCCCTGTCGACCTGGCCGATCATGCGGCCGCAGTCCTCCGCCGTCC-GGCCCTGCTTGATCCCCAGCGACGCCAGCACGGCGCCCAGCTCGTCCACGGTGATGAACCCGTCGCCGTTCCGGTCGAACACGTCGAACGCCTCGCGCATGCTCGCCTCATCCACGTCGCAGGCGCCGCCGCCGCCGCCGCCGCCGCCGTCGACGCGCATGACGGTCTCGTACAGCTGGGTGAACTCGTCCATGTCGACGCACCCGTCGCCGTTGGCGTCGATGCGGGCGATGGTGGCGGCGAGCTCCTCCCTGTGCACGGGCATCCCGAGCCTCTCCAGCGACTCCGTCAGCTCCTCCCGGGTGATCCGGCCGTCGCCGTCACGGTCGAACAGCTCGAACACCCGCCGGAGCTCCGCCTGCTGGTCGCACGCCATCCCCTCGCCGCCGGCCGGCGCCCGCCGCCGCTAGCTGGTGGTGCAGCCGGCTGCACGTACGGCCACAGGGGAGCGTGTGGGAGGGAGGCGTCGGAGGCCGCGGTGGTGGTGG] [+] EMBL AU183053 [TTTTTTTTTTTTTTTTTTAAATTTCTTAATTATAGCAGGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG CCGCCGCGC AT CATCTGCTTGAAC TCGAGGAAGTCGAC GCGGCCGTCGCCGTCCCTGTCGACCT ] [-] EMBL AU197581 [ TTTTTTTTTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG CCGCCGCGC AT CATCTGCTTGAAC TCGAGGAAGTCGAC GCGGCCGTCGCCGTCCCTGTCGACCTG ] [-] EMBL AU029820 [ TTTTTTTTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCANCGGAGCGTGGCGAACGGGCCCGCCGGGA AT CATCTGCTTGAACTTCGAGGAAGTCGACGGGGGCCGTtggc ] [-] EMBL AU029816 [ TTTTTTTTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGTG CCGCCG GN ATNCATCTGCTTGAAC TCGAGGAAGTCGAC GCGGNCGTCGACGTCCCTGTCGACCTGGCCGATCATGC ] [-] EMBL C99000 [ TTTTTTTTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGNTCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG CCGCCGCGCAAT CATCTGCTTGAAC TCGAGGAAGTCGAC GCGGCCGTCGCCGTCCCTGTNGACCTGGg ] [-] EMBL AU175134 [ TTTTTTTTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG CCGCCGCGA AT CATCTGCTTGAAC TCGAGGAAGTCGAC GCGGCCGTCGCCGTCCCTGTCGACCTG ] [+] EMBL AK100200 [ TTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTCCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG CCGCCGCGC AT CATCTGCTTGAAC TCGAGGAAGTCGAC GCGGCCGTCGCCGTCCCTGTCGACCTGGCCGATCATGCGGCCGCAGTCCTCCGCCGTCC GGCCCTGCTTGATCCCCAGCGACGCCAGCACGGCGCCCAGCTCGTCCACGGTGATGAACCCGTCGCCGTTCCGGTCGAACACGTCGAACGCCTCGCGCATGCTCGCCTCATCCACGTCGCAGGCGCCGCCGCCGCCGCCGCCGCCGCCGTCGACGCGCATGACGGTCTCGTACAGCTGGGTGAACTCGTCCATGTCGACGCACCCGTCGCCGTTGGCGTCGATGCGGGCGATGGTGGCGGCGAGCTCCTCCCTGTGCACGGGCATCCCGAGCCTCTCCAGCGACTCCGTCAGCTCCTCCCGGGTGATCCGGCCGTCGCCGTCACGGTCGAACAGCTCGAACACCCGCCGGAGCTCCGCCTGCTGGTCGCACGCCATCCCCTCGCCGCCGGCCGGCGCCCGCCGCCGCTAGCTGGTGGTGCAGCCGGCTGCACGTACGGCCACAGGGGAGCGTGTGGGAGGGAGGCGTCGGAGGCCGCGGTGGTGGTGG] [-] EMBL AU101243 [ CCTCCGCCGTCCGGGCCCTGCTTGATCCCCAGCGACGCCAGCACGGCGCCCAGCTCGTCCACGGTGATGAACCCGTCGCCGTTCCGGTCGAACACGTCGAACGCCTCGCGCATGCTCGCCTCATCCACGTCGCAGGCGCCGCCGCCGCCGCCGCCGCCGCCGTCGACGCGCATGACGGTCTCGTACAGCTGGGTGAACTCGTCCATGTCGACGCACCCGTCGCCGTTGGCGTCGATGCGGGCGATGGTGGCGGCGAGCTCCTCCCTGTGCACGGGCATCCCGAGCCTCTCCAGCGACTCCGTCAGCTCCTCCCGGGTGATCCGGCCGTCGCCGTCACGGTCGAACAGCTCGAACACCCGCCGGAGCTCCGCCTGCTGGTCGCACGCCATCCCCTCGCCGCCGGCCGGCGCCCGCCGCCGCTAGCTGGTGGTGCAGCCGGCTGCACGTACGGCCACAGGGGAGCGTGTGGGAGGGAGGCGTCGGAGGCCGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||