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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10835#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1774 fasta sequence
[AGGAGACGCTCTCACCGGCGAGGGTTTAGCGCCGCTTTTCTCAGGGTTTCTCGGCGGGCGGCGGCGCGCCAGCTTCCGTCGACCACGAGGCTAAAACCCTAATCCCGGCGATGAGGCGGCTGCCCAAATCGCTCCTGCTCGCCTCCCTCTCCAAGCCCTTCCTCCGCCGCAACCGGGAACCCCTCCCGCTCCTCCGGCCGCCGCCGCGTCCCCTCCCGCGCGTGCTCCCCTTCGCCGCACGAACCCTAGCCGCGCCGGCCGCTCCTCCTCCCGAGGCGGCGCCGGCTGCTCAATCCGATGGGTTCGCGCTCCTGGAGGCCGCCCAGCTCCGGGAGGCCGCGGACGACCACCAGGAGGCCCTCGCCCTCGCCATCAAGGCGCTCGAGCCGCTGCAGGCGTCGCACGGCGGCTGGTCGCTCCCCGTCGCGCGCACCCTCCGCCTCGCGGCGTCTGACCTCATGCGCGCCATGGAGCTGAAGGCCGTGTTCCTGGAGAAAGGGAGTTTGGAGTTGGGAAATGCTTACAAGGATGTCGCCGAGGCCTACAGAGGCGTACTGGCCTGTGACAAAGCGTTGCCACTGTGCCTTGAGGCGTTGGAGATTGCCCGTAATCATTTCGGAGGAGATTCCCAAGAGGTGGCTAAGGTCCGGCAGCTTCTCGCGACCATCTATGCTGGATCAGGTCGAAATGAGGAGGCACTGGAGCAGTATGAAATCGTTCGGATGGTGTATGAGAGGCTGGGGTTGGATGTGGAGCTTTCTCTGGCTGAAACTGATGTGGCCATGGTGCTGGTTTTGTTGGGGAGATCTGAGGAGGCAATGGATGTTCTTAAAAGGGTGATCAATCGGGCTGGCAAAGAGAGTGAGGAGCGTGCACTAGCATTCGTTGCAATGGCAAATATTTTGTGCATCCAGGACAGAAAGGCCGACTCAAAGCGG-TGCTTAGAGATTGCTCGTGAGATTCTTGACACGAAGATTTCTGTGAGTCCCTTACAGGTTGCGCAGGTGTATGCAGAGATGTCGATGTTGTATGAGACAATGATAGAATTTGAGGTGGCGCTGTGTTTGATGAAGAAAACACTTGTGTTTCTCGACGGCGTATCTGAGATGCAGCACATTCAGGGGAGCATATCAGCTAGAATGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATATCTGCAGAGCGCAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATAAGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCAGAGTCAGCTATAAAGTACTTTACTATTGCGAAGGACATTATTAATGCTACATATGGGCCAAAACATGAGGATACTATCGACACCATCCAGTCCATTGCAAATGCATATGGGGTGATGGGAAGCTACAAGCAGGCAATGGATTACCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTGCTTTCGAGGAACTCAGGGAAGCTCAAAGGCTTCGGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCTTCTCTCATCAACGTCCACCACCTAGATGATTCAATGGTAAATTATGTTTTTATAATTTTGATGCA-TTGACTCCATAAAAATCATTCTTGTTGAGTTAGTGGACGATTATTCCTGCAGTAAACATGGCCACATGGGCAGGAGGATTTTTCTAGTATTATAAATC]
[+] EMBL AK111396 [AGGAGACGCTCTCACCGGCGAGGGTTTAGCGCCGCTTTTCTCAGGGTTTCTCGGCGGGCGGCGGCGCGCCAGCTTCCGTCGACCACGAGGCTAAAACCCTAATCCCGGCGATGAGGCGGCTGCCCAAATCGCTCCTGCTCGCCTCCCTCTCCAAGCCCTTCCTCCGCCGCAACCGGGAACCCCTCCCGCTCCTCCGGCCGCCGCCGCGTCCCCTCCCGCGCGTGCTCCCCTTCGCCGCACGAACCCTAGCCGCGCCGGCCGCTCCTCCTCCCGAGGCGGCGCCGGCTGCTCAATCCGATGGGTTCGCGCTCCTGGAGGCCGCCCAGCTCCGGGAGGCCGCGGACGACCACCAGGAGGCCCTCGCCCTCGCCATCAAGGCGCTCGAGCCGCTGCAGGCGTCGCACGGCGGCTGGTCGCTCCCCGTCGCGCGCACCCTCCGCCTCGCGGCGTCTGACCTCATGCGCGCCATGGAGCTGAAGGCCGTGTTCCTGGAGAAAGGGAGTTTGGAGTTGGGAAATGCTTACAAGGATGTCGCCGAGGCCTACAGAGGCGTACTGGCCTGTGACAAAGCGTTGCCACTGTGCCTTGAGGCGTTGGAGATTGCCCGTAATCATTTCGGAGGAGATTCCCAAGAGGTGGCTAAGGTCCGGCAGCTTCTCGCGACCATCTATGCTGGATCAGGTCGAAATGAGGAGGCACTGGAGCAGTATGAAATCGTTCGGATGGTGTATGAGAGGCTGGGGTTGGATGTGGAGCTTTCTCTGGCTGAAACTGATGTGGCCATGGTGCTGGTTTTGTTGGGGAGATCTGAGGAGGCAATGGATGTTCTTAAAAGGGTGATCAATCGGGCTGGCAAAGAGAGTGAGGAGCGTGCACTAGCATTCGTTGCAATGGCAAATATTTTGTGCATCCAGGACAGAAAGGCCGACTCAAAGCGG TGCTTAGAGATTGCTCGTGAGATTCTTGACACGAAGATTTCTGTGAGTCCCTTACAGGTTGCGCAGGTGTATGCAGAGATGTCGATGTTGTATGAGACAATGATAGAATTTGAGGTGGCGCTGTGTTTGATGAAGAAAACACTTGTGTTTCTCGACGGCGTATCTGAGATGCAGCACATTCAGGGGAGCATATCAGCTAGAATGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATATCTGCAGAGCGCAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATAAGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCAGAGTCAGCTATAAAGTACTTTACTATTGCGAAGGACATTATTAATGCTACATATGGGCCAAAACATGAGGATACTATCGACACCATCCAGTCCATTGCAAATGCATATGGGGTGATGGGAAGCTACAAGCAGGCAATGGATTACCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTGCTTTCGAGGAACTCAGGGAAGCTCAAAGGCTTCGGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCTTCTCTCATCAACGTCCACCACCTAGATGATTCAATGGTAAATTATGTTTTTATAATTTTGATGCA TTGACTCCATAAAAATCATTCTTGTTGAGTTAGTGGACGATTA ]
[+] EMBL CA999382 [ TGGCGAAGAGAGTGAGGAGCGTGCACTATCATTCGTTGCAATGGCAAATATTTTGTGCATCCAGGACAGAAAGGCCGACTCAAAGCGGTTGCTTAGAGATTGCTCGTGAGATTCTTGACACGAAGATTTCTGTGAGTCCCTTACAGGTTGCGCAGGTGTATGCAGAGATGTCGATGTTGTATGAGACAATGATAGAATTTGAGGTGGCGCTGTGTTTGATGAAGAAAACACTTGTGTTTCTCGACGGCGTATCTGAGATGCAGCACATTCAGGGGAGCATATCAGCTAGAATGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATATCTGCAGAGCGCAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTACGGTTTGCTTATAAGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCA ]
[+] EMBL CA999349 [ TGGCAAAGAGAGTGAGGAGCGTGCACTAGCATTCGTTGCAATGGCAAATATTTTGTGCATCCAGGACAGAAAGGCCGACTCAAAGCGG TGCTTAGAGATTGCTCGTGAGATTCTTGACACGAAGATTTCTGTGAGTCCCTTACAGGTTGCGCAGGTGTATGCAGAGATGTCGATGTTGTATGAGACAATGATAGAATTTGAGGTGGCGCTGTGTTTGATGAAGAAAACACTTGTGTTTCTCGACGGCGTATCTGAGATGCAGCACATTCAGGGGAGCATATCAGCTAGAATGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATATCTGCAGAGCGCAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATAAGCATTTGGGAGATGCTTATCTTGCC ]
[-] EMBL CB631504 [ tgnACACGAAGATTTCTGTGAGTCCCTTACAGGTTGCGCAGGTGTATGCAGAGATGTCGATGTTGTATGAGACAATGATAGAATTTGAGGTGGCGCTGTGTTTGATGAAGAAAACACTTGTGTTTCTCGACGGCGTATCTGAGATGCAGCACATTCAGGGGAGCATATCAGCTAGAATGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATTTCTGCAGAGCGCAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATAAGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCAGAGTCAGCTATAAAGTACTTTACTATTGCGAAGGACATTATTAATGCTACATATGGGCCAAAACATGAGGATACTATCGACACCATCCAGTCCATTGCAAATGCATATGGGGTGATGGGAAGCTACAAGCAGGCAATGGATTACCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTGCTTTCGAGGAACTCAGGGAAGCTCAAAGACTTCGGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAG TTCTCTCATCAATGTCCACCACCTAGATGATTCAATGGTAAATTATGTTTTTATAATTTTGATGCAGTTGACTCAATAAAAATCATTCTTGTTGAGTTAGCGGACGATTATTCCTGCAGTAAACATGGCCACATGGGCAGGAGGATTTTTCTAGTATTATAAATC]
consensusID : consensus_10835#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 818 fasta sequence
[AGCTAGAATGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATTTCTGCAGAGCGCAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATAAGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCAGAGTCAGCTATAAAGTACTTTACTATTGCGAAGGACATTATTAATGCTACATATGGGCCAAAACATGAGGATACTATCGACACCATCCAGTCCATTGCAAATGCATATGGGGTGATGGGAAGCTACAAGCAGGCAATGGATTACCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTGCTTTCGAGGAACTCAGGGAAGCTCAAAGACTTCGGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCTCTCATCAATGTCCACCACCTAGATGATTCAATGGTGTGAATACAGGACATTACAAGACTTGGTATATCTTTATGAGTGGCAGTTAGTGCATGACACAGTTTGTGTATCGAGCGCTGGAAATCATGATACTTGATGATGTCCACTACTTCACTTTTAGAATATTTACCTGACGAGAACTGGATTCATGTATTTGCCGAGTTGGAAGTATCAGNTCTACTCCTTNCGNTTCAAATTACTTGGCGGTTTAGTTTAGCTTTGNCAATTGTCATAAGTCAAACAGNTGGAAGNTTGACCATTTAATTTCTGAAACTTTACATAGNTTAACATGCGAATTATATT]
[+] EMBL CA764514 [AGCTAGAATGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATTTCTGCAGAGCGCAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATAAGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCAGAGTCAGCTATAAAGTACTTTACTATTGCGAAGGACATTATTAATGCTACATATGGGCCAAAACATGAGGATACTATCGACACCATCCAGTCCATTGCAAATGCATATGGGGTGATGGGAAGCTACAAGCAGGCAATGGATTACCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTGCTTTCGAGGAACTCAGGGAAGCTCAAAGACTTCGGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCTCTCATCAATGTCCACCACCTAGATGATTCAATGGTGTGAATACAGGACATTACAAGACTTGGTATATCTTTATGAGTGGCAGTTAGTGCATGACACAGTTTGTGTATCGAGCGCTGGAAATCATGATACTTGATGATGTCCACTACTTCACTTTTAGAATATTTACCTGACGAGAACTGGATTCATGTATTTGCCGAGTTGGAAGTATCAGNTCTACTCCTTNCGNTTCAAATTACTTGGCGGTTTAGTTTAGCTTTGNCAATTGTCATAAGTCAAACAGNTGGAAGNTTGACCATTTAATTTCTGAAACTTTACATAGNTTAACATGCGAATTATATT]
consensusID : consensus_10835#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence
[ATGATAGAATNTGAGGTGGCGCTGTGTTTGATGAAGAAAACACTTGTGTTTCTCGACGGCGTATTTGAGATGTAGCACATTCAGGGGAGCATATCAGCTAGAATGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATTTTTGCAGAGCGCAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATAAGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCAGAGTCAGCTATAAAGTACTTTACTATTGCGAAGGACATTATTAATGCTACATATGGGCCAAAACATGAGGATACTATCGACACCATCCAGTCCATTGCAAATGCATATGGGGTGATGGGAAGCTACAAGCAGGCAATGGATTACCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTGCTTTCGAGGAACTCAGGGAAGCTCAAAGACTTCGGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCTCTCATCAATGTCCCCCCCCTAGATGATTCAATGGTAAATTATGTTTTTATAATTTTGATGCATTGACTCAATAAAAATCATTCTTGTTGAGTTAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA762162 [ATGATAGAATNTGAGGTGGCGCTGTGTTTGATGAAGAAAACACTTGTGTTTCTCGACGGCGTATTTGAGATGTAGCACATTCAGGGGAGCATATCAGCTAGAATGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATTTTTGCAGAGCGCAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATAAGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCAGAGTCAGCTATAAAGTACTTTACTATTGCGAAGGACATTATTAATGCTACATATGGGCCAAAACATGAGGATACTATCGACACCATCCAGTCCATTGCAAATGCATATGGGGTGATGGGAAGCTACAAGCAGGCAATGGATTACCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTGCTTTCGAGGAACTCAGGGAAGCTCAAAGACTTCGGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCTCTCATCAATGTCCCCCCCCTAGATGATTCAATGGTAAATTATGTTTTTATAATTTTGATGCATTGACTCAATAAAAATCATTCTTGTTGAGTTAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10835#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 679 fasta sequence
[TCGGGTAACCGCCCAGCGTTTTCCCCCGGCGCGATCTTTGTAAAAGCGGCGGGCCCGTGGGGGCGGCGTTCTCCGACTCCCTATAGGGCCGCTGGGGTGCCCGGCCCCCCCTGGAGGTGCCCGGATGCGATAAGCTTGCTTAAGGGCCGAGGCAAGGGGGAAAAATTCAAGAGCTGCTTTGGCCCCTTGCCCTTTGGGTTAGGGTTTGCTTATAAGCATTTGGGAGATGGTTATCTTGCCCTGAACCAATCAGAGTGAGCTATAAAGTGCTTTACTATTGCGAAGGACATCATTAATGCTGCATATGGGCCAAAACATGAGGGTACTATCGCCACCATCCAGTCCATTGCAAATGCATGTGGGGTGATGGGAAGCTACAAGCAGGCAATGGATTCCCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTGCTTTCGAGGAACTCAGGGAAGCTCAAAGATTTCGGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCTTTCATCAATGTCCCCCACCTAGATGATTCAATGGTAAATTGTGTTTTTATAATTTTGATGCATTGACTCAATAAAAATCATTCTTGTTGAGTTAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA762161 [TCGGGTAACCGCCCAGCGTTTTCCCCCGGCGCGATCTTTGTAAAAGCGGCGGGCCCGTGGGGGCGGCGTTCTCCGACTCCCTATAGGGCCGCTGGGGTGCCCGGCCCCCCCTGGAGGTGCCCGGATGCGATAAGCTTGCTTAAGGGCCGAGGCAAGGGGGAAAAATTCAAGAGCTGCTTTGGCCCCTTGCCCTTTGGGTTAGGGTTTGCTTATAAGCATTTGGGAGATGGTTATCTTGCCCTGAACCAATCAGAGTGAGCTATAAAGTGCTTTACTATTGCGAAGGACATCATTAATGCTGCATATGGGCCAAAACATGAGGGTACTATCGCCACCATCCAGTCCATTGCAAATGCATGTGGGGTGATGGGAAGCTACAAGCAGGCAATGGATTCCCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTGCTTTCGAGGAACTCAGGGAAGCTCAAAGATTTCGGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCTTTCATCAATGTCCCCCACCTAGATGATTCAATGGTAAATTGTGTTTTTATAATTTTGATGCATTGACTCAATAAAAATCATTCTTGTTGAGTTAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10835#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 401 fasta sequence
[GGTGGGCCCNGGTGGCTTTCNANGGAAACNCGGGAAGGTCCNTTCANTTNCGCGGTATCAGCTAAAAATATACCAGCCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGAACGAGAATAGTTCTCTCATCAATGTCCACCACCTAGATGATTCAATGGTAAATTATGTTTTTATAATTTCGATGCATTGACCAATAAAAATCATTCTTGTTGAATTAGCGGGACGATTATTCCTGCNGTATACATGGCCACATGGGCATGAAGATTTTCCTAGTATTATAAATCNAGTTTTTTNCCAAGGGCCCTGACNGCTGATAATCANCTGATATGAGTNTTTTACTGTGGGAAACAAACNCCTGAAACTTGCTGNAATNATATGTTNTTTGCCTNA]
[+] EMBL BE228505 [GGTGGGCCCNGGTGGCTTTCNANGGAAACNCGGGAAGGTCCNTTCANTTNCGCGGTATCAGCTAAAAATATACCAGCCATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGAACGAGAATAGTTCTCTCATCAATGTCCACCACCTAGATGATTCAATGGTAAATTATGTTTTTATAATTTCGATGCATTGACCAATAAAAATCATTCTTGTTGAATTAGCGGGACGATTATTCCTGCNGTATACATGGCCACATGGGCATGAAGATTTTCCTAGTATTATAAATCNAGTTTTTTNCCAAGGGCCCTGACNGCTGATAATCANCTGATATGAGTNTTTTACTGTGGGAAACAAACNCCTGAAACTTGCTGNAATNATATGTTNTTTGCCTNA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 AGGAGACGCTCTCACCGGCGAGGGTTTAGCGCCGCTTTTCTCAGGGTTTCTCGGCGGGCG 60
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 GCGGCGCGCCAGCTTCCGTCGACCACGAGGCTAAAACCCTAATCCCGGCGATGAGGCGGC 120
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 TGCCCAAATCGCTCCTGCTCGCCTCCCTCTCCAAGCCCTTCCTCCGCCGCAACCGGGAAC 180
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 CCCTCCCGCTCCTCCGGCCGCCGCCGCGTCCCCTCCCGCGCGTGCTCCCCTTCGCCGCAC 240
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 GAACCCTAGCCGCGCCGGCCGCTCCTCCTCCCGAGGCGGCGCCGGCTGCTCAATCCGATG 300
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 GGTTCGCGCTCCTGGAGGCCGCCCAGCTCCGGGAGGCCGCGGACGACCACCAGGAGGCCC 360
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 TCGCCCTCGCCATCAAGGCGCTCGAGCCGCTGCAGGCGTCGCACGGCGGCTGGTCGCTCC 420
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 CCGTCGCGCGCACCCTCCGCCTCGCGGCGTCTGACCTCATGCGCGCCATGGAGCTGAAGG 480
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 CCGTGTTCCTGGAGAAAGGGAGTTTGGAGTTGGGAAATGCTTACAAGGATGTCGCCGAGG 540
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 CCTACAGAGGCGTACTGGCCTGTGACAAAGCGTTGCCACTGTGCCTTGAGGCGTTGGAGA 600
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 TTGCCCGTAATCATTTCGGAGGAGATTCCCAAGAGGTGGCTAAGGTCCGGCAGCTTCTCG 660
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 CGACCATCTATGCTGGATCAGGTCGAAATGAGGAGGCACTGGAGCAGTATGAAATCGTTC 720
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 GGATGGTGTATGAGAGGCTGGGGTTGGATGTGGAGCTTTCTCTGGCTGAAACTGATGTGG 780
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 CCATGGTGCTGGTTTTGTTGGGGAGATCTGAGGAGGCAATGGATGTTCTTAAAAGGGTGA 840
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 TCAATCGGGCTGGCAAAGAGAGTGAGGAGCGTGCACTAGCATTCGTTGCAATGGCAAATA 900
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 TTTTGTGCATCCAGGACAGAAAGGCCGACTCAAAGCGGTGCTTAGAGATTGCTCGTGAGA 960
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 TTCTTGACACGAAGATTTCTGTGAGTCCCTTACAGGTTGCGCAGGTGTATGCAGAGATGT 1020
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ------------------------------------------------------------
consensus_10835#3 -----------------------TCGGGTAACCGCCCAGCGTTTTCCCCCGGCGCGATCT 37
consensus_10835#2 -----------------ATGATAGAATNTGAGGTGGCGCTGTGTTTGATGAAGAAAACAC 43
consensus_10835#0 CGATGTTGTATGAGACAATGATAGAATTTGAGGTGGCGCTGTGTTTGATGAAGAAAACAC 1080
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ----------------------------------------------------AGCTAGAA 8
consensus_10835#3 TTGTAAAAGCGGCGGGCCCGTGGGGGCGGCGTTCTCCGACTCCCTATAGGGCCGCTGGGG 97
consensus_10835#2 TTGTGTTTCTCGACGGCGTATTTGAGATGTAGCACATTCAGGGGAGCATATCAGCTAGAA 103
consensus_10835#0 TTGTGTTTCTCGACGGCGTATCTGAGATGCAGCACATTCAGGGGAGCATATCAGCTAGAA 1140
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 TGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATTTCTGCAGAGCG 68
consensus_10835#3 TGCC-CGGCCCCCCCTGGAGGTGCCCGGATGCGATAAGCTTGCTTAAGGGCCG--AGGCA 154
consensus_10835#2 TGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATTTTTGCAGAGCG 163
consensus_10835#0 TGGGGTGGCTTCTTCTGAAGACCGAAAGAGTAGATGAGGCTGTTCCATATCTGCAGAGCG 1200
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 CAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATA 128
consensus_10835#3 AGGGGGAAAAATTCAAGAGCTGCTTTGGCCCCTTGCCCTTTGGGTTAGGGTTTGCTTATA 214
consensus_10835#2 CAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATA 223
consensus_10835#0 CAATTGAAAAATTGAAGAACTGCTTTGGACCATTGCACTTTGGATTAGGGTTTGCTTATA 1260
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 AGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCAGAGTCAGCTATAAAGTACTTTA 188
consensus_10835#3 AGCATTTGGGAGATGGTTATCTTGCCCTGAACCAATCAGAGTGAGCTATAAAGTGCTTTA 274
consensus_10835#2 AGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCAGAGTCAGCTATAAAGTACTTTA 283
consensus_10835#0 AGCATTTGGGAGATGCTTATCTTGCCATGAACCAATCAGAGTCAGCTATAAAGTACTTTA 1320
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 CTATTGCGAAGGACATTATTAATGCTACATATGGGCCAAAACATGAGGATACTATCGACA 248
consensus_10835#3 CTATTGCGAAGGACATCATTAATGCTGCATATGGGCCAAAACATGAGGGTACTATCGCCA 334
consensus_10835#2 CTATTGCGAAGGACATTATTAATGCTACATATGGGCCAAAACATGAGGATACTATCGACA 343
consensus_10835#0 CTATTGCGAAGGACATTATTAATGCTACATATGGGCCAAAACATGAGGATACTATCGACA 1380
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 CCATCCAGTCCATTGCAAATGCATATGGGGTGATGGGAAGCTACAAGCAGGCAATGGATT 308
consensus_10835#3 CCATCCAGTCCATTGCAAATGCATGTGGGGTGATGGGAAGCTACAAGCAGGCAATGGATT 394
consensus_10835#2 CCATCCAGTCCATTGCAAATGCATATGGGGTGATGGGAAGCTACAAGCAGGCAATGGATT 403
consensus_10835#0 CCATCCAGTCCATTGCAAATGCATATGGGGTGATGGGAAGCTACAAGCAGGCAATGGATT 1440
consensus_10835#4 ------------------------------------------------------------
consensus_10835#1 ACCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTG-CTTTCGAGG--AAC 365
consensus_10835#3 CCCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTG-CTTTCGAGG--AAC 451
consensus_10835#2 ACCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTG-CTTTCGAGG--AAC 460
consensus_10835#0 ACCAAGAACAAGTTATAGATGCTTATGAAAGCTGTGGCCCTGGTG-CTTTCGAGG--AAC 1497
consensus_10835#4 ------------------------------GGTG-GGCCCNGGTGGCTTTCNANGGAAAC 29
* ** ***** **** ***** * * ***
consensus_10835#1 TCAGGGAAGCTCAAAGACTTC---GGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTC 422
consensus_10835#3 TCAGGGAAGCTCAAAGATTTC---GGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTC 508
consensus_10835#2 TCAGGGAAGCTCAAAGACTTC---GGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTC 517
consensus_10835#0 TCAGGGAAGCTCAAAGGCTTC---GGTATCAGCTAAAAATAAAAGCCCGAGGTTTACCTC 1554
consensus_10835#4 NCGGGAAGGTCCNTTCANTTNCGCGGTATCAGCTAAAAATATA---CCAG--------CC 78
* ** * * * ** ***************** * ** *
consensus_10835#1 ATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCT--- 479
consensus_10835#3 ATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCT--- 565
consensus_10835#2 ATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCT--- 574
consensus_10835#0 ATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGACCGAGAATAGTTCTTCT 1614
consensus_10835#4 ATGCATGCTTCCCTGCCAACTCATTGCCAACTAAATTCCAAGAACGAGAATAGTTCT--- 135
******************************************* *************
consensus_10835#1 CTCATCAATGTCCACCACCTAGATGATTCAATGGTGTGAATACAGGACATTACAAGACTT 539
consensus_10835#3 TTCATCAATGTCCCCCACCTAGATGATTCAATGGT-----------AAATTGT--GTTTT 612
consensus_10835#2 CTCATCAATGTCCCCCCCCTAGATGATTCAATGGT-----------AAATTAT--GTTTT 621
consensus_10835#0 CTCATCAACGTCCACCACCTAGATGATTCAATGGT-----------AAATTAT--GTTTT 1661
consensus_10835#4 CTCATCAATGTCCACCACCTAGATGATTCAATGGT-----------AAATTAT--GTTTT 182
******* **** ** ****************** * *** * **
consensus_10835#1 GGTATATCTTTATGAGTGGCAGTTAGTGCATGACACAGTTTGTGTATCGA-GCGCTGGAA 598
consensus_10835#3 TATA-ATTTTGATGCATTG-ACTCAATAAAAATCATTCTTGTTGAGTTAA-AAAAAAAAA 669
consensus_10835#2 TATA-ATTTTGATGCATTG-ACTCAATAAAAATCATTCTTGTTGAGTTAA-AAAAAAAAA 678
consensus_10835#0 TATA-ATTTTGATGCATTG-ACTCCATAAAAATCATTCTTGTTGAGTTAG-TGGACGATT 1718
consensus_10835#4 TATA-ATTTCGATGCATTG--ACCAATAAAAATCATTCTTGTTGAATTAGCGGGACGATT 239
** ** * *** * * * * ** ** ** *
consensus_10835#1 ATCATGATACTTGATGATGTCCACTACTTCACTTTTAGAATATTTACCTGACGAGAACTG 658
consensus_10835#3 AAAAAAAAAA-------------------------------------------------- 679
consensus_10835#2 AAAAAAAAAAAA------------------------------------------------ 690
consensus_10835#0 ATTCCTGCAGTAAACATGGCC----ACATGGGCAGGAGGATTTTTCTAGTATTATAAATC 1774
consensus_10835#4 ATTCCTGCNGTATACATGGCC----ACATGGGCATGAAGATTTTCCTAGTATTATAAATC 295
*
consensus_10835#1 GATTCATGTATTTGCCGAGTTGGAAGTATCAGNTCTACTCCT-TNCGNTTCAAATTACTT 717
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 ------------------------------------------------------------
consensus_10835#4 NAGTTTTTTNCCAAGGGCCCTGACNGCTGATAATCANCTGATATGAGTNTTTTACTGTGG 355
consensus_10835#1 GGCGGTTTAGTTTAGCTTTGNCAATTGTCATAAGTCAAACAGNTGGAAGNTTGACCATTT 777
consensus_10835#3 ------------------------------------------------------------
consensus_10835#2 ------------------------------------------------------------
consensus_10835#0 ------------------------------------------------------------
consensus_10835#4 GAAACAAACNCCTGAAACTTGCTGNAATNATATGTTNTTTGCCTNA-------------- 401
consensus_10835#1 AATTTCTGAAACTTTACATAGNTTAACATGCGAATTATATT 818
consensus_10835#3 -----------------------------------------
consensus_10835#2 -----------------------------------------
consensus_10835#0 -----------------------------------------
consensus_10835#4 -----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||