cluster # 10836

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Oryza sativa
cluster # 10836 cluster # 10836 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10836#0 length = 976 sequences # 8
consensusID : consensus_10836#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 976
fasta sequence
                              [CTTGGCTACTGCATTGCAGGGAAGGAGAAGCTCCTGCTGTACGAGTACATGGAGAAAGGCGACCTCCACCGGTGGCTGCACGAGCTTCCAGCAGGGCGGCCCGACATGGAGGACGACACCGGCGGTGACATCTGGGAGGTGGCGGAGGACAAGCGGTCCATCTCCGACTGGCCGACCCGGCAC-CG-CATCGCGCTAGGGATCGCCCGAGGGCTCGCGTTCCTGCACCAAGGGTGGGCAGGGTCGGGTCGGCCGGTCGTGCACGGTCATCTGGTCCCAACCAACATCCTCCTCGGCGAAGACCTAGAGCC-TCGGATATCCGACTTCGGGCCACCCTAGCGACACGA-CGCCAGAGGGGGATGTGTACAGCTTCGGCGTGCTGGTGCTCGAGCTCATAACCGGCCAAGCC-GGCT-GGGACGAAGCGTCAGTTAGCTGGGCGCGGGGGATCATCCGCGACCAGAAGGGTCTAGACATCGTGGACCCGAGAGTGCGGGACGAGGCGGGCGGCGGGCCGGAGACGTCGACGGTGGAGCGGGAGATGGTGGAGTGCCTGCGGGTGGGGTACTCTGCACCGCGCAG-TCGCCGGAGAAGAGGCCGACGATGCAGCAGGTGGTGGGGGTGCTCAAGGACAT-CCGGGTGGCACCTGCCAGCAGCTCATCCACTTGACGGTGGTGGAGCAGCGCCATCGTGTGTGTCCGTCGCAATTGGGACCCGCCGTCGCCTGAGAAGAGATCCCAGTGTGGCAGCCTTT-CTGATCTGGTAGACAAGCCTTGGTGGTCGGTAGTAGAAACACATGTGCATGTAACAATTTTTTCTCGCCGGTAAAACAGTTGGTTTCAGAGCCCCTTGTCTCTCTTGTTTTTACTTTGGTGGATTTATTGCGTTGGGCAGGAACATCAACAGTTTTGGTACTGTATTTAATTGCAAGCCGCCATGAGNNNTNNNGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C22566               [CTTGGCTACTGCATTGCAGGGAAGGAGAAGCTCCTGCTGTACGAGTACATGGAGAAAGGCGACCTCCACCGGTGGCTGCACGAGCTTCCAGCAGGGCGGCCCGACATGGAGGACGACACCGGCGGTGACATCTGGGAGGTGGCGGAGGACAAGCGGTCCATCTCCGACTGGCCGACCCGGCAC CG CATCGCGCTAGGGATCGCCCGAGGGCTCGCGTTCCTGCACCAAGGGTGGGCAGGGTCGGGTCGGCCGGTCGTGCACGGTCATCTGGTCCCAACCAACATCCTCCTCGGCGAAGACCTAGAGCC TCGGATATCCGACTTCGGGCCACCCTAGCGACACGA CGCCAGAGGGGGATGTGTACAGCTTCGGCGTGCTGGTGCTCGAGCTCATAACCGGCCAAGCCGGGCT GGGACGAAGCGTCAGTTAGCTGGGCGCGGGGGATCATCCGCGACCAGAAGGGTCTAGACATCGTGGACCCGAGAGTGCGGGACGAGGCGGGCGGCGGGCCGGAGACGTCGACGGTGGAGCGGGAGATGGTGGAGTGCCTGCGGGTGGGGTACTCTGCACCGCGCAG TCGCCGGAGAAGAGGCCGACGATGCAGCAGGTGGTGGGGGTG TCAAGGACAT CCGGGTGGCA CTGCCAGCAGCTCATCCACTTGACGGTGGTGGAGCAGCGCCATCGTGTGTGTCCGTCG AATTGGGACCCGCCGTCGCCTGAGAAGAGATTCCAGTGTGGAAGCCTTT CTGATCTGGTAGACAAGCCTTGGTGGTCGGTAGTAGAAACACATGT                                                                                                                                                                                      ]
[+] EMBL C22574               [CTTGGCTACTGCATTGCAGGGAAGGAGAAGCTCCTGCTGTACGAGTACATGGAGAAAGGCGACCTCCACCGGTGGCTGCACGAGCTTCCAGCAGGGCGGCCCGACATGGAGGACGACACCGGCGGTGACATCTGGGAGGTGGCGGAGGACAAGCGGTCCATCTCCGACTGGCCGACCCGGCACNAA NATCGCGCTAGGGATCGCCCGAGGGCTCGCGTTCCTGCACCAAGGGTGGGCAGGGTCGGGTCGGCCGGTCGTGCACGGTCATCTGGTCCCAACCAACATCCTCCTCGGCGAAGACCTAGAGCC TCGGATATCCGACTTTCGGCCACCCTAGCGACACGA CGCCAGAGGGGGATGTGTACAGCTTCGGCGTGCTGGTGCTCGAGCTCATAACCGGCCAAGCC GGCT GGGACGAAGCGTCAGTTAGCTGGGCGCGGGGGATCATCCGCGACCAGAAGGGTCTAGACATCGTGGACCCGAGAGTGCGGGACGAGGCGGGCGGCGGGCCGGAGACGTCGACGGTGGAGCGGGAGATGGTGGAGTGCCTGCGGGTGGGGTACTCTGCACCGCGCAG TCGCCGGAGAAGAGGCCGACGATGCAGCAGGTGGTGGGGGTGCTCAAGGACAT CCGGGTGGCACCTGCCAGCAGCTCATCCACTTGACGGTGGTGGAGCAGCGCCATCGTGTGTGTCCGTCGCAATTGGGACCCGCCGTCG CTGAGAAGAGATTCCAGTGTGGCAG CTTT CTGATCTGGTA ACAAGCCTTGGTGGTCGGTAGTAG AACACATG                                                                                                                                                                                       ]
[+] EMBL C22492               [CTTGGCTACTGCATTGCAGGGAAGGAGAAGCTCCTGCTGTACGAGTACATGGAGAAAGGCGACCTCCACCGGTGGCTGCACGAGCTTCCAGCAGGGCGGCCCGACATGGAGGACGACACCGGCGGTGACATCTGGGAGGTGGCGGAGGACAAGCGGTCCATCTCCGACTGGCCGACCCGGCAC CGACATCGCGCTAGGGATCGCCCGAGGGCTCGCGTTCCTGCACCAAGGGTGGGCAGGGTCGGGTCGGCCGGTCGTGCACGGTCATCTGGTCCCAACCAACATCCTCCTCGGCGAAGACCTAGAGCCTTCGGATATCCGACTTTGGGNCACCCTAGCGACACGAGCGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C22564               [ TTGGCTACTGCATTGCAGGGAAGGAGAAGCTCCTGCTGTACGAGTACATGGAGAAAGGCGACCTCCACCGGTGGCTGCACGAGCTTCCAGCAGGGCGGCCCGACATGGAGGACGACACCGGCGGTGACATCTGGGAGGTGGCGGAGGACAAGCGGTCCATCTCCGACTGGCCGACCCGGCAC GG NATCGCGCTAGGGATCGCCCGAGGGCTCGCGTTCCTGCACCAAGGGTGGGCAGGGTCGGGTCGGCCGGTCGTGCACGGTCATCTGGTCCCAACCAACATCCTCCTCGGCGAAGACCTAGAGCC TCGGATATCCGACTTC GGCCACCCTAGCGACACGA CGCCAGAGGGGGATGTGTACAGCTTCGGCGTGCTGGTGCTCGAGCTCATAACCGGCCAAGCC GGCTGGGGACGAAGCGTCAGTTAGCTGGGCGCGGGGGATCATCCGCGACCAGAAGGGTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU029810             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGTTCGCCGGAGAAGAGGCCGACGATNCAGCAGGTGGTGGGGGTGCTCAAGGACATCCCGGGTGGCACCTGCCAGCAGCTCATCCACTTGACGGTGGTGGAGCAGCGCCATCGTGTGTGTCCGTCGCAATTGGGACCCGCCGTCGCCTGAGAAGAGATCCCAGTGTGGCAGCCTTTCCTGATCTGGTAGACAAGCCTTGGTGGTCGGTAGTAGAAACACATGTGCATGTAACAATTTTTTCTCGCCGGTAAAACAGTTGGTTTCAGAGCCCCTTGTCTCTCTTGTTTTTACTTTGGTGGATTTATTGCGTTGGGCAGGAACATCAACAGTTTTGGTACTGTATTTAATTGCAAGCCGCCATGAGNNNTNNNGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C22567               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGGCCGACGATGCAGCAGGTGNTGGGGGTGCTCAAGGACAT CCGGNTGGCACCTGCCAGCAGCTCATCCACTTGACGGTGGTGGAGCAGCGCCATCGTGTGTGTCCGTCGCAATTGGGACCCGCCGTCGCCTGAGAAGAGATCCCAGTGTGGCAGCCTTTCCTGATCTGGTAGACAAGCCTTGGTGGTCGGTAGTAGAAACACATGTGCATGTAACAATTTTTTCTCGCCGGTAAAACAGTTGGTTTCAGAGCCCCTTGTCTCTCTTGTTTTTACTTTGGTGGATTTATTGCGTTGGGCAGGAACATCAACAGTTTTGGTACTGTATTTAATTGCAAGCCGCCATGAGGNNTNCNGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C22575               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGNCCGACGATGCAGCAGGTGGTGGGGNTGCTCAAGGACAT CCGGGTGGCACCTGCCAGCAGCTCATCCACTTGACGGTGGTGGAGCAGCGCCATCGTGTGTGTCCGTCGCAATTGGGACCCGCCGTCGCCTGAGAAGAGATCCCAGTGTGGCAGCCTTTCCTGATCTGGTAGACAAGCCTTGGTGGTCGGTAGTAGAAACACATGTGCATGTAACAATTTTTTCTCGCCGGTAAAACAGTTGGTTTCAGAGCCCCTTGTCTCTCTTGTTTTTACTTTGGTGGATTTATTGCGTTGGGCAGGAACATCAACAGTTTTGGTACTGTATTTAATTGCAAGCCGCCNTGAGNNNTNNNNTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C22493               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATCTGGTAGACAAGCCTTGGTGGTCGGTAGTNGAAACACATGTGCATGTAACAATTTTTTCTCGCCGGTAAAACAGTTGGTTTCAGAGCCCCTTGTCTCTCTTGTTTTTNCTTTGGTGGATTTATTGCGTTGGGCAGGAACNTCAACAGTTTTGGTACTGTATTTAATTGCAAGCCGCNATNNNNNNTNNCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10836#0
CTTGGCTACTGCATTGCAGGGAAGGAGAAGCTCCTGCTGTACGAGTACATGGAGAAAGGC
GACCTCCACCGGTGGCTGCACGAGCTTCCAGCAGGGCGGCCCGACATGGAGGACGACACC
GGCGGTGACATCTGGGAGGTGGCGGAGGACAAGCGGTCCATCTCCGACTGGCCGACCCGG
CACCGCATCGCGCTAGGGATCGCCCGAGGGCTCGCGTTCCTGCACCAAGGGTGGGCAGGG
TCGGGTCGGCCGGTCGTGCACGGTCATCTGGTCCCAACCAACATCCTCCTCGGCGAAGAC
CTAGAGCCTCGGATATCCGACTTCGGGCCACCCTAGCGACACGACGCCAGAGGGGGATGT
GTACAGCTTCGGCGTGCTGGTGCTCGAGCTCATAACCGGCCAAGCCGGCTGGGACGAAGC
GTCAGTTAGCTGGGCGCGGGGGATCATCCGCGACCAGAAGGGTCTAGACATCGTGGACCC
GAGAGTGCGGGACGAGGCGGGCGGCGGGCCGGAGACGTCGACGGTGGAGCGGGAGATGGT
GGAGTGCCTGCGGGTGGGGTACTCTGCACCGCGCAGTCGCCGGAGAAGAGGCCGACGATG
CAGCAGGTGGTGGGGGTGCTCAAGGACATCCGGGTGGCACCTGCCAGCAGCTCATCCACT
TGACGGTGGTGGAGCAGCGCCATCGTGTGTGTCCGTCGCAATTGGGACCCGCCGTCGCCT
GAGAAGAGATCCCAGTGTGGCAGCCTTTCTGATCTGGTAGACAAGCCTTGGTGGTCGGTA
GTAGAAACACATGTGCATGTAACAATTTTTTCTCGCCGGTAAAACAGTTGGTTTCAGAGC
CCCTTGTCTCTCTTGTTTTTACTTTGGTGGATTTATTGCGTTGGGCAGGAACATCAACAG
TTTTGGTACTGTATTTAATTGCAAGCCGCCATGAGNNNTNNNGTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case