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Oryza sativa
cluster # 10850 cluster # 10850       Sequences # 8       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10850#0 length = 2527 sequences # 6  
 consensus_10850#1 length = 634 sequences # 2  
consensusID : consensus_10850#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2527
fasta sequence 
                              [CAAGCCAAGACGAACACGAAGAGAAGAGAGAAGCAAACCAAACGGAAGCAAGAACCCATCTCCCACCTCCCCCACCAGCAGCAGCAGCAGCAATCCGCGCACTCCGGCGCGCGCGGGGGAGCAGCAGCAGCAGCAGAAGCGGAATTCCTCGCGGCGGCGGCGGCGTCCTCCAATCCGATTCCGCCAATCCCAATTGCTGCCCCCCTCGGCGAGGTCAGCTCCAATTCTTGCTGTTTTTCTCGGATTCGATTCGGTCGTGGAGTGGGAGGCGGTTGGTCGCCCTCCTCGCCGGAGATCCAGGCGGCGCGGGCCCGGGGCGGAGCTCGCCGGGGTCGGGATCATGCCCCCATTGCGCTAGGGTTTGGGTGGGTAATCCAATTTGGCTCCCGCCCGACGACTCGCCGCCCTGGATGCTTGATTCGGGCCAGCCGCACCGCTCCCGGGGCGGGTGGTTGCTTCCGCGGCGATTGGTGTGGTTCCGGCGGAGATGAGATCGCCTCCATGGCTGGCGAGCTGGGAATTGGGCTACGGGCTCGCGCTCTGCAGGAGGCGACGGAGGCCATAGTGGTTTGATCCGAGCTGGGTTGGTGCGGCGCGCTGTCACCGATTCGTGGTTTCTGTGCTCTGAATCCGATATTGGGGTTCGCCGGGGTGGTGATTTTATGGACATGGTGAGGGAGGAGGCGTGGCCGCTCGCTGCACCGCAGCAGCAGCAGCAGCCATCAGCTCCTCCACCGCAGCCGCAGGCGCAGCAGCAGAATGGCCGTATCGATCTCCGCGAGGTGAAGCTTCGGCTGGAGAAGAGGCTTGGTCCTGACAGGTCAAGGAGGTACTTCAGCTACTTGAAGGGCTACCTGTCGAATAGGCTCAGCAAGGCGGATTTCGACAAGGTGTGCCTCCAAACATTGGGGAGAGAGAACCTCCGAGTGCATAATCAGCTGATACGCTCAGTTCTCTACAACGCCTACCATGCGAAGTGTCCACCTCCAACACCAGCACCAGATGTTGGGAGGTCTGTGGGAGCAACAGTGAAGAAGGTTTGTCAGCCCGGCGAAGCATTGAATTCTTGCAATGGGGACATCAGGTTATTACAGATGCAGGGGTCAAGGCATATGAGCACAATGCAAGATCATCAGTCAAAAGATCGGATGAAAAGCACGGGCCTGAGTTGTAGGGTAGATGCTTCTGCCAATCACAGCCAGATTACTCACGGTGGTGCGGCAGTACCAGAGAATGGCACCCTAAGTTCTTCTGACCTCAAGAGATCAGTGCATTTTCAACATGAATCTGCAGAGCCATTGGCAAAGCACCAACGTGTGGAGCAGTCACCAACTGGAAACATAATCAAGTTGAGAAGAAGCATGAGCAATGTCTCGGATCATTCTGCAGAAGCATCGAATAGCCCTGTACGGGCACCACTTGGAATTCCTTTTTGTTCAGCGAGTGTGGGCGGGGCAAGGAAATTACCACCACCACTAATTAGTGCAGGTGAGGATCACTGTACCAGCTGTTGTGAGCATCGTGAATTGTTAAATACAGAGGCATTGCATCGGCGGATGGAGAAAACAGCAGAGTCACTGGGCCTAGCTGGTGTCACATTGGATTGTGCTGACCTTCTGAATAACGGTTTGGACAAGTACTTGAAGAACCTGATTAGGTCATCAGTTGAGTTAATAGGAGCTAATGTTCAAAGTGATGCAAGAAAAGGGGAATTGTACAAGCAGCATGCATATGGAAAACATATGAATGGTGTTTGGTTGCCAAATCATGTTCAGATGCAATCAGGCAGTGGACCATCCGGAGCAACGAATGATATCAGAAATCACCACTTGATCTCCCTTGATGATTTCAAGGTAGCTATGCAGCTAAATCCTCAACAGCTCGGGGAGGACTGGCCAGTCCTCCTTGAAAAGATATGCTTATGTTCACCAGAAGAAAATGACTGACAGATGGAAAGTGCTATTTCAAATAGA-TTTTTTGTACCAATGTGTTTTTGGTGCCCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAGTCA-AGCAACAGAAGATGCGCATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGCGAAAGAAAGCCAATTCTTTTCTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTTGACGTTGCTTAGACCTCATTAGCTCTCCTGAGATGGAGACTGTTCATCCAAAAGTCCCAACTTCTATGTAACATCTGGCATAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGTAACTTATAGGAAAATGTTCTGTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAATTTTCTAGGTATCTTCAGTACTAATTTCAGGGATGTTGAACGTTAATTTTATTTAAATTCTTTTGTAACTGTGTTTTTGAAAGTTATATGTTAGATCTCTAAGACCTCTCCTCTCCCTTGATGTGTTTGTCTGCTTGGGAGTGGGTAGATGTTTCCATCTTCACTCCAGATATGAAAACGTAGATAT]

[+] EMBL AK065495             [CAAGCCAAGACGAACACGAAGAGAAGAGAGAAGCAAACCAAACGGAAGCAAGAACCCATCTCCCACCTCCCCCACCAGCAGCAGCAGCAGCAATCCGCGCACTCCGGCGCGCGCGGGGGAGCAGCAGCAGCAGCAGAAGCGGAATTCCTCGCGGCGGCGGCGGCGTCCTCCAATCCGATTCCGCCAATCCCAATTGCTGCCCCCCTCGGCGAGGTCAGCTCCAATTCTTGCTGTTTTTCTCGGATTCGATTCGGTCGTGGAGTGGGAGGCGGTTGGTCGCCCTCCTCGCCGGAGATCCAGGCGGCGCGGGCCCGGGGCGGAGCTCGCCGGGGTCGGGATCATGCCCCCATTGCGCTAGGGTTTGGGTGGGTAATCCAATTTGGCTCCCGCCCGACGACTCGCCGCCCTGGATGCTTGATTCGGGCCAGCCGCACCGCTCCCGGGGCGGGTGGTTGCTTCCGCGGCGATTGGTGTGGTTCCGGCGGAGATGAGATCGCCTCCATGGCTGGCGAGCTGGGAATTGGGCTACGGGCTCGCGCTCTGCAGGAGGCGACGGAGGCCATAGTGGTTTGATCCGAGCTGGGTTGGTGCGGCGCGCTGTCACCGATTCGTGGTTTCTGTGCTCTGAATCCGATATTGGGGTTCGCCGGGGTGGTGATTTTATGGACATGGTGAGGGAGGAGGCGTGGCCGCTCGCTGCACCGCAGCAGCAGCAGCAGCCATCAGCTCCTCCACCGCAGCCGCAGGCGCAGCAGCAGAATGGCCGTATCGATCTCCGCGAGGTGAAGCTTCGGCTGGAGAAGAGGCTTGGTCCTGACAGGTCAAGGAGGTACTTCAGCTACTTGAAGGGCTACCTGTCGAATAGGCTCAGCAAGGCGGATTTCGACAAGGTGTGCCTCCAAACATTGGGGAGAGAGAACCTCCGAGTGCATAATCAGCTGATACGCTCAGTTCTCTACAACGCCTACCATGCGAAGTGTCCACCTCCAACACCAGCACCAGATGTTGGGAGGTCTGTGGGAGCAACAGTGAAGAAGGTTTGTCAGCCCGGCGAAGCATTGAATTCTTGCAATGGGGACATCAGGTTATTACAGATGCAGGGGTCAAGGCATATGAGCACAATGCAAGATCATCAGTCAAAAGATCGGATGAAAAGCACGGGCCTGAGTTGTAGGGTAGATGCTTCTGCCAATCACAGCCAGATTACTCACGGTGGTGCGGCAGTACCAGAGAATGGCACCCTAAGTTCTTCTGACCTCAAGAGATCAGTGCATTTTCAACATGAATCTGCAGAGCCATTGGCAAAGCACCAACGTGTGGAGCAGTCACCAACTGGAAACATAATCAAGTTGAGAAGAAGCATGAGCAATGTCTCGGATCATTCTGCAGAAGCATCGAATAGCCCTGTACGGGCACCACTTGGAATTCCTTTTTGTTCAGCGAGTGTGGGCGGGGCAAGGAAATTACCACCACCACTAATTAGTGCAGGTGAGGATCACTGTACCAGCTGTTGTGAGCATCGTGAATTGTTAAATACAGAGGCATTGCATCGGCGGATGGAGAAAACAGCAGAGTCACTGGGCCTAGCTGGTGTCACATTGGATTGTGCTGACCTTCTGAATAACGGTTTGGACAAGTACTTGAAGAACCTGATTAGGTCATCAGTTGAGTTAATAGGAGCTAATGTTCAAAGTGATGCAAGAAAAGGGGAATTGTACAAGCAGCATGCATATGGAAAACATATGAATGGTGTTTGGTTGCCAAATCATGTTCAGATGCAATCAGGCAGTGGACCATCCGGAGCAACGAATGATATCAGAAATCACCACTTGATCTCCCTTGATGATTTCAAGGTAGCTATGCAGCTAAATCCTCAACAGCTCGGGGAGGACTGGCCAGTCCTCCTTGAAAAGATATGCTTATGTTCACCAGAAGAAAATGACTGACAGATGGAAAGTGCTATTTCAAATAGATTTTTTTGTACCAATGTGTTTTTGGTGCCCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAGTCA AGCAACAGAAGATGCGCATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGCGAAAGAAAGCCAATTCTTTTCTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTTGACGTTGCTTAGACCTCATTAGCTCTCCTGAGATGGAGACTGTTCATCCAAAAGTCCCAACTTCTATGTAACATCTGGCATAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGTAACTTATAGGAAAATGTTCTGTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAATTTTCTAGGTATCTTCAGTACTAATTTCAGGGATGTTGAACGTTAATTTTATTTAAATTCTTTTGTAACTGTGTTTTTGAAAGTTATATGTTAGATCTCTAAGACCTCTCCTCTCCCTTGATGTGTTTGTCTGCTTGGGAGTGGGTAGATGTTTCCATCTTCACTCCAGATATGAAAACGTAGATAT]
[+] EMBL CB637657             [            AACACGAAGAGAAGAGAGAAGCAAACCAAACGGAAGCAAGAACCCATCTCCCACCTCCCCCACCAGCAGCAGCAGCAGCAATCCGCGCACTCCGGCGCGCGCGGGGGAGCAGCAGCAGCAGCAGAAGCGGAATTCCTCGCGGCGGCGGCGGCGTCCTCCAATCCGATTCCGCCAATCCCAATTGCTGCCCCCCTCGGCGAGGTCAGCTCCAATTCTTGCTGTTTTTCTCGGATTCGATTCGGTCGTGGAGTGGGAGGCGGTTGGTCGCCCTCCTCGCCGGAGATCCAGGCGGCGCGGGCCCGGGGCGGAGCTCGCCGGGGTCGGGATCATGCCCCCATTGCGCTAGGGTTTGGGTGGGTAATCCAATTTGGCTCCCGCCCGACGACTCGCCGCCCTGGATGCTTGATTCGGGCCACCCGCACCGCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB637655             [            AACACGAAGAGAAGAGAGAAGCAAACCAAACGGAAGCAAGAACCCATCTCCCACCTCCCCCACCAGCAGCAGCAGCAGCAATCCGCGCACTCCGGCGCGCGCGGGGGAGCAGCAGCAGCAGCAGAAGCGGAATTCCTCGCGGCGGCGGCGGCGTCCTCCAATCCGATTCCGCCAATCCCAATTGCTGCCCCCCTCGGCGAGGTCAGCTCCAATTCTTGCTGTTTTTCTCGGATTCGATTCGGTCGTGGAGTGGGAGGCGGTTGGTCNCCCTCCTCGCCGGAGATCCAAGCGGCGCGGGCCCGGGGCGGAGCTCGCCGGGGTCGGGATCATGCCCCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB631005             [                                        AACGGAAGCAAGAACCCATCTCCCACCTCCCCCACCAGCAGCAGCCGCAGCAATCCGCGCACTCCGGCGCGCGCGGGGGAGCAGCAGCAGCAGCAGAAGCGGAATTCCTCGCGGCGGCGGCGGCGTCCTCCAATCCGATTCCGCCAATCCCAATTGCTGCCCCCCTCGGCGAGGTCAGCTCCAATTCTTGCTGTTTTTCTCGGATTCGATTCGGTCGTGGAGTGGGAGGCGGTTGGTCGCCCTCCTCGCCGGAGATCCAGGCGGCGCGGGCCCGGGGCGGAGCTCGCCGGGGTCGGGATCATGCCCCCATTGCGCTAGGGTTTGGGTGGGTAATCCAATTTGGCTCCCGCCCGACGACTCGCCGCCCTGGATGCTTGATTCGGGCCAGCCGCACCGCTCCCGGGGCGGGTGGTTGCTTCCGCGGCGATTGGTGTGGTTCCGGCGGAGATGAGATCGCCTCCATGGCTGGCGAGCTGGGAATTGGGCTACGGGCTCGCGTTCTGCAGGAGGCGACGGAGGCCATAGTGGTTTGATCCGAGCTGGGTTGGTGCGGCGCGCTGTCACCGATTCGTGGTTTCTGTGCTCTGAATCCGATATTGGGGTTCGCCGGGGTGGTGATTTTATGGACATGGTGAGGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB631006             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGTACTTGAAGAACCTGATTAGGTCATCAGTTGAGTTAATAGGAGCTAATGTTCAAAGTGATGCAAGAAAAGGGGAATTGTACAAGCAGCATGCATATGGAAAACATATGAATGGTGTTTGGTTGCCAAATCATGTTCAGATGCAATCAGGCAGTGGACCATCCGGAGCAACGAATGATATCAGAAATCACCACTTGATCTCCCTTGATGATTTCAAGGTAGCTATGCAGCTAAATCCTCAACAGCTCGGGGAGGACTGGCCAGTCCTCCTTGAAAAGATATGCTTATGTTCACCAGAAGAAAATGACTGACAGATGGAAAGTGCTATTTCAAATAGA TTTTTTGTACCAATGTGTTTTTGGTGCCCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAGTCA AGCAACAGAAGATGCGCATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGCGAAAGAAAGCCAATTCTTTTCTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTTGACGTTGCTTAGACCTCATTAGCTCTCCTGAGATGGAGACTGTTCATCCAAAAGTCCCAACTTCTATGTAACATCTGGCATAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGTAACTTATAGGAAAATGTTCTGTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAATTTTCTAGGTATCTTCAGTACTAATTTCAGGGATGGGGAACGTTAATTTTATTTAAA                                                                                                                                  ]
[+] EMBL BI812708             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACCAGAAGAAAATGACTGACAGATGGAAAGTGCTATTTCAAATAGA TTTTTTGTACC ATGTGTTTTTGGTGCCCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAGTCAGAGC ACAGAAGATGCGCATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGCGAAAGAAAGCCCATTCTTTTCTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTTGACGTTGCTTAGACCTCATTAGCTCTCCTGAGATGGAGACTGTTCATCC AAAGTCCCAACTTCTATGTAACATCTGGCATAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGTAACTTATAGGAAAATGTTCTGTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAATTTTCTAGGTATCTTCAGTACTAATTTCAGGGATGTTGAACGTTAATTTTATTTAAATTCTTTTGTAACTGTGTTTTTGAAAGTTAaaaa                                                                                                 ]




>consensus_10850#0
CAAGCCAAGACGAACACGAAGAGAAGAGAGAAGCAAACCAAACGGAAGCAAGAACCCATC
TCCCACCTCCCCCACCAGCAGCAGCAGCAGCAATCCGCGCACTCCGGCGCGCGCGGGGGA
GCAGCAGCAGCAGCAGAAGCGGAATTCCTCGCGGCGGCGGCGGCGTCCTCCAATCCGATT
CCGCCAATCCCAATTGCTGCCCCCCTCGGCGAGGTCAGCTCCAATTCTTGCTGTTTTTCT
CGGATTCGATTCGGTCGTGGAGTGGGAGGCGGTTGGTCGCCCTCCTCGCCGGAGATCCAG
GCGGCGCGGGCCCGGGGCGGAGCTCGCCGGGGTCGGGATCATGCCCCCATTGCGCTAGGG
TTTGGGTGGGTAATCCAATTTGGCTCCCGCCCGACGACTCGCCGCCCTGGATGCTTGATT
CGGGCCAGCCGCACCGCTCCCGGGGCGGGTGGTTGCTTCCGCGGCGATTGGTGTGGTTCC
GGCGGAGATGAGATCGCCTCCATGGCTGGCGAGCTGGGAATTGGGCTACGGGCTCGCGCT
CTGCAGGAGGCGACGGAGGCCATAGTGGTTTGATCCGAGCTGGGTTGGTGCGGCGCGCTG
TCACCGATTCGTGGTTTCTGTGCTCTGAATCCGATATTGGGGTTCGCCGGGGTGGTGATT
TTATGGACATGGTGAGGGAGGAGGCGTGGCCGCTCGCTGCACCGCAGCAGCAGCAGCAGC
CATCAGCTCCTCCACCGCAGCCGCAGGCGCAGCAGCAGAATGGCCGTATCGATCTCCGCG
AGGTGAAGCTTCGGCTGGAGAAGAGGCTTGGTCCTGACAGGTCAAGGAGGTACTTCAGCT
ACTTGAAGGGCTACCTGTCGAATAGGCTCAGCAAGGCGGATTTCGACAAGGTGTGCCTCC
AAACATTGGGGAGAGAGAACCTCCGAGTGCATAATCAGCTGATACGCTCAGTTCTCTACA
ACGCCTACCATGCGAAGTGTCCACCTCCAACACCAGCACCAGATGTTGGGAGGTCTGTGG
GAGCAACAGTGAAGAAGGTTTGTCAGCCCGGCGAAGCATTGAATTCTTGCAATGGGGACA
TCAGGTTATTACAGATGCAGGGGTCAAGGCATATGAGCACAATGCAAGATCATCAGTCAA
AAGATCGGATGAAAAGCACGGGCCTGAGTTGTAGGGTAGATGCTTCTGCCAATCACAGCC
AGATTACTCACGGTGGTGCGGCAGTACCAGAGAATGGCACCCTAAGTTCTTCTGACCTCA
AGAGATCAGTGCATTTTCAACATGAATCTGCAGAGCCATTGGCAAAGCACCAACGTGTGG
AGCAGTCACCAACTGGAAACATAATCAAGTTGAGAAGAAGCATGAGCAATGTCTCGGATC
ATTCTGCAGAAGCATCGAATAGCCCTGTACGGGCACCACTTGGAATTCCTTTTTGTTCAG
CGAGTGTGGGCGGGGCAAGGAAATTACCACCACCACTAATTAGTGCAGGTGAGGATCACT
GTACCAGCTGTTGTGAGCATCGTGAATTGTTAAATACAGAGGCATTGCATCGGCGGATGG
AGAAAACAGCAGAGTCACTGGGCCTAGCTGGTGTCACATTGGATTGTGCTGACCTTCTGA
ATAACGGTTTGGACAAGTACTTGAAGAACCTGATTAGGTCATCAGTTGAGTTAATAGGAG
CTAATGTTCAAAGTGATGCAAGAAAAGGGGAATTGTACAAGCAGCATGCATATGGAAAAC
ATATGAATGGTGTTTGGTTGCCAAATCATGTTCAGATGCAATCAGGCAGTGGACCATCCG
GAGCAACGAATGATATCAGAAATCACCACTTGATCTCCCTTGATGATTTCAAGGTAGCTA
TGCAGCTAAATCCTCAACAGCTCGGGGAGGACTGGCCAGTCCTCCTTGAAAAGATATGCT
TATGTTCACCAGAAGAAAATGACTGACAGATGGAAAGTGCTATTTCAAATAGATTTTTTG
TACCAATGTGTTTTTGGTGCCCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAG
TCAAGCAACAGAAGATGCGCATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGC
GAAAGAAAGCCAATTCTTTTCTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTT
GACGTTGCTTAGACCTCATTAGCTCTCCTGAGATGGAGACTGTTCATCCAAAAGTCCCAA
CTTCTATGTAACATCTGGCATAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGT
AACTTATAGGAAAATGTTCTGTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAA
TTTTCTAGGTATCTTCAGTACTAATTTCAGGGATGTTGAACGTTAATTTTATTTAAATTC
TTTTGTAACTGTGTTTTTGAAAGTTATATGTTAGATCTCTAAGACCTCTCCTCTCCCTTG
ATGTGTTTGTCTGCTTGGGAGTGGGTAGATGTTTCCATCTTCACTCCAGATATGAAAACG
TAGATAT

consensusID : consensus_10850#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 634
fasta sequence 
                              [AATCACCACTTGATCTCCCTTGATGATTTCAAGGTAGCTATGCAGCTAAATCCTCAACAGCTCGGGGAGGACTGGCCAGTCCTCCTTGAAAAGATATGCTTATGTTCACCAGAAGAAAATGACTGACAGATGGAAAGTGCTATTTCAAATAGATTTTTTGTACCAATGTGTTTTTGGTGCCCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAGTCAAGCAACAGAAGATGCGCATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGCGAAAGAAAGCCAATTCTTTTCTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTTGACGTTGCTTAGACCTCATTAGCTCTCCTGAGATGGAGACTGTTCATCCAAAAGTCCCAACTTCTATGTAACATCTGGCATAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGTAACTTATAGGAAAATGTTCTGTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAATTTTCTAGGTATCTTCAGTACTAATTTCAGGGATGTTGAACGTTAATTTTATTTAAATTCTTTTGTAACTGTGTTTTTGAAAAAAATATGTTAGATCT-CAAAAAAAAAGAAAAA]

[-] EMBL CB637658             [AATCACCACTTGATCTCCCTTGATGATTTCAAGGTAGCTATGCAGCTAAATCCTCAACAGCTCGGGGAGGACTGGCCAGTCCTCCTTGAAAAGATATGCTTATGTTCACCAGAAGAAAATGACTGACAGATGGAAAGTGCTATTTCAAATAGATTTTTTGTACCAATGTGTTTTTGGTGCCCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAGTCAAGCAACAGAAGATGCGCATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGCGAAAGAAAGCCAATTCTTTTCTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTTGACGTTGCTTAGACCTCATTAGCTCTCCTGAGATGGAGACTGTTCATCCAAAAGTCCCAACTTCTATGTAACATCTGGCATAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGTAACTTATAGGAAAATGTTCTGTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAATTTTCTAGGTATCTTCAGTACTAATTTCAGGGATGTTGAACGTTAATTTTATTTAAATTCTTTTGTAACTGTGTTTTTGAAAAAAATATGTTAGATCT CAAAAAAAAAGAAAA ]
[-] EMBL CB637656             [                                       ATGCAGTTAAATCCTCAACAGCTCGGGGAGGACTGGCCAGTCTTCCTTGAAAAGATATGCTTATGTTCACCAGAAGAAAATGACTGACAGATGGAAAGTGCTATTTCAAATAGATTTTTTGTACCAATGTGTTTTTGGTGCCCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAGTCAAGCAACAGAAGATGCGCATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGCGAAAGAAAGCCAATTCTTTTCTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTTGACGTTGCTTAGACCTCATTAGCTCTCCTGAGATGGAGACTGTTCATCCAAAAGTCCCAACTTCTATGTAACATCTGGCATAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGTAACTTATAGGAAAATGTTCTGTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAATTTTCTAGGTATCTTCAGTACTAA TTCAGGGATGTTGAACGTTAATTTTATTTAAAGTCTTTTGTAACTGTG TTTTGAAAAAAATATGTTAGATCTCCAAAAAAAAAGAAAAA]




>consensus_10850#1
AATCACCACTTGATCTCCCTTGATGATTTCAAGGTAGCTATGCAGCTAAATCCTCAACAG
CTCGGGGAGGACTGGCCAGTCCTCCTTGAAAAGATATGCTTATGTTCACCAGAAGAAAAT
GACTGACAGATGGAAAGTGCTATTTCAAATAGATTTTTTGTACCAATGTGTTTTTGGTGC
CCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAGTCAAGCAACAGAAGATGCGC
ATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGCGAAAGAAAGCCAATTCTTTT
CTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTTGACGTTGCTTAGACCTCATT
AGCTCTCCTGAGATGGAGACTGTTCATCCAAAAGTCCCAACTTCTATGTAACATCTGGCA
TAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGTAACTTATAGGAAAATGTTCT
GTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAATTTTCTAGGTATCTTCAGTA
CTAATTTCAGGGATGTTGAACGTTAATTTTATTTAAATTCTTTTGTAACTGTGTTTTTGA
AAAAAATATGTTAGATCTCAAAAAAAAAGAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10850#0      CAAGCCAAGACGAACACGAAGAGAAGAGAGAAGCAAACCAAACGGAAGCAAGAACCCATC 60
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      TCCCACCTCCCCCACCAGCAGCAGCAGCAGCAATCCGCGCACTCCGGCGCGCGCGGGGGA 120
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      GCAGCAGCAGCAGCAGAAGCGGAATTCCTCGCGGCGGCGGCGGCGTCCTCCAATCCGATT 180
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      CCGCCAATCCCAATTGCTGCCCCCCTCGGCGAGGTCAGCTCCAATTCTTGCTGTTTTTCT 240
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      CGGATTCGATTCGGTCGTGGAGTGGGAGGCGGTTGGTCGCCCTCCTCGCCGGAGATCCAG 300
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      GCGGCGCGGGCCCGGGGCGGAGCTCGCCGGGGTCGGGATCATGCCCCCATTGCGCTAGGG 360
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      TTTGGGTGGGTAATCCAATTTGGCTCCCGCCCGACGACTCGCCGCCCTGGATGCTTGATT 420
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      CGGGCCAGCCGCACCGCTCCCGGGGCGGGTGGTTGCTTCCGCGGCGATTGGTGTGGTTCC 480
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      GGCGGAGATGAGATCGCCTCCATGGCTGGCGAGCTGGGAATTGGGCTACGGGCTCGCGCT 540
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      CTGCAGGAGGCGACGGAGGCCATAGTGGTTTGATCCGAGCTGGGTTGGTGCGGCGCGCTG 600
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      TCACCGATTCGTGGTTTCTGTGCTCTGAATCCGATATTGGGGTTCGCCGGGGTGGTGATT 660
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      TTATGGACATGGTGAGGGAGGAGGCGTGGCCGCTCGCTGCACCGCAGCAGCAGCAGCAGC 720
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      CATCAGCTCCTCCACCGCAGCCGCAGGCGCAGCAGCAGAATGGCCGTATCGATCTCCGCG 780
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      AGGTGAAGCTTCGGCTGGAGAAGAGGCTTGGTCCTGACAGGTCAAGGAGGTACTTCAGCT 840
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      ACTTGAAGGGCTACCTGTCGAATAGGCTCAGCAAGGCGGATTTCGACAAGGTGTGCCTCC 900
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      AAACATTGGGGAGAGAGAACCTCCGAGTGCATAATCAGCTGATACGCTCAGTTCTCTACA 960
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      ACGCCTACCATGCGAAGTGTCCACCTCCAACACCAGCACCAGATGTTGGGAGGTCTGTGG 1020
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      GAGCAACAGTGAAGAAGGTTTGTCAGCCCGGCGAAGCATTGAATTCTTGCAATGGGGACA 1080
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      TCAGGTTATTACAGATGCAGGGGTCAAGGCATATGAGCACAATGCAAGATCATCAGTCAA 1140
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      AAGATCGGATGAAAAGCACGGGCCTGAGTTGTAGGGTAGATGCTTCTGCCAATCACAGCC 1200
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      AGATTACTCACGGTGGTGCGGCAGTACCAGAGAATGGCACCCTAAGTTCTTCTGACCTCA 1260
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      AGAGATCAGTGCATTTTCAACATGAATCTGCAGAGCCATTGGCAAAGCACCAACGTGTGG 1320
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      AGCAGTCACCAACTGGAAACATAATCAAGTTGAGAAGAAGCATGAGCAATGTCTCGGATC 1380
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      ATTCTGCAGAAGCATCGAATAGCCCTGTACGGGCACCACTTGGAATTCCTTTTTGTTCAG 1440
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      CGAGTGTGGGCGGGGCAAGGAAATTACCACCACCACTAATTAGTGCAGGTGAGGATCACT 1500
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      GTACCAGCTGTTGTGAGCATCGTGAATTGTTAAATACAGAGGCATTGCATCGGCGGATGG 1560
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      AGAAAACAGCAGAGTCACTGGGCCTAGCTGGTGTCACATTGGATTGTGCTGACCTTCTGA 1620
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      ATAACGGTTTGGACAAGTACTTGAAGAACCTGATTAGGTCATCAGTTGAGTTAATAGGAG 1680
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      CTAATGTTCAAAGTGATGCAAGAAAAGGGGAATTGTACAAGCAGCATGCATATGGAAAAC 1740
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      ATATGAATGGTGTTTGGTTGCCAAATCATGTTCAGATGCAATCAGGCAGTGGACCATCCG 1800
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      GAGCAACGAATGATATCAGAAATCACCACTTGATCTCCCTTGATGATTTCAAGGTAGCTA 1860
consensus_10850#1      --------------------AATCACCACTTGATCTCCCTTGATGATTTCAAGGTAGCTA 40
                                           ****************************************

consensus_10850#0      TGCAGCTAAATCCTCAACAGCTCGGGGAGGACTGGCCAGTCCTCCTTGAAAAGATATGCT 1920
consensus_10850#1      TGCAGCTAAATCCTCAACAGCTCGGGGAGGACTGGCCAGTCCTCCTTGAAAAGATATGCT 100
                       ************************************************************

consensus_10850#0      TATGTTCACCAGAAGAAAATGACTGACAGATGGAAAGTGCTATTTCAAATAGATTTTTTG 1980
consensus_10850#1      TATGTTCACCAGAAGAAAATGACTGACAGATGGAAAGTGCTATTTCAAATAGATTTTTTG 160
                       ************************************************************

consensus_10850#0      TACCAATGTGTTTTTGGTGCCCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAG 2040
consensus_10850#1      TACCAATGTGTTTTTGGTGCCCATCTGATGTACATTTGAGCTGAAGCGATTATACTGCAG 220
                       ************************************************************

consensus_10850#0      TCAAGCAACAGAAGATGCGCATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGC 2100
consensus_10850#1      TCAAGCAACAGAAGATGCGCATTTGGGGATAAGGCAGAATTCTGCTGTCAGATTTGCAGC 280
                       ************************************************************

consensus_10850#0      GAAAGAAAGCCAATTCTTTTCTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTT 2160
consensus_10850#1      GAAAGAAAGCCAATTCTTTTCTCCTGATAAATGCCCTCATAAAGAAGAATATCTTCCGTT 340
                       ************************************************************

consensus_10850#0      GACGTTGCTTAGACCTCATTAGCTCTCCTGAGATGGAGACTGTTCATCCAAAAGTCCCAA 2220
consensus_10850#1      GACGTTGCTTAGACCTCATTAGCTCTCCTGAGATGGAGACTGTTCATCCAAAAGTCCCAA 400
                       ************************************************************

consensus_10850#0      CTTCTATGTAACATCTGGCATAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGT 2280
consensus_10850#1      CTTCTATGTAACATCTGGCATAAGGGGACAGAAGACAGCAAAATGCAAGAGCTGTCCTGT 460
                       ************************************************************

consensus_10850#0      AACTTATAGGAAAATGTTCTGTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAA 2340
consensus_10850#1      AACTTATAGGAAAATGTTCTGTAAGTTTCTAGGTCAGGATGTACATTATTGATTCCAAAA 520
                       ************************************************************

consensus_10850#0      TTTTCTAGGTATCTTCAGTACTAATTTCAGGGATGTTGAACGTTAATTTTATTTAAATTC 2400
consensus_10850#1      TTTTCTAGGTATCTTCAGTACTAATTTCAGGGATGTTGAACGTTAATTTTATTTAAATTC 580
                       ************************************************************

consensus_10850#0      TTTTGTAACTGTGTTTTTGAAAGTTATATGTTAGATCTCTAAGACCTCTCCTCTCCCTTG 2460
consensus_10850#1      TTTTGTAACTGTGTTTTTGAAAAAAATATGTTAGATCTCAAAAAAAAAGAAAAA------ 634
                       **********************   ************** ** *                

consensus_10850#0      ATGTGTTTGTCTGCTTGGGAGTGGGTAGATGTTTCCATCTTCACTCCAGATATGAAAACG 2520
consensus_10850#1      ------------------------------------------------------------
                                                                                   

consensus_10850#0      TAGATAT 2527
consensus_10850#1      -------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)