|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10869#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1975 fasta sequence
[ATGCGACCAAGAAGCGTGTGGCCATCGTCCGCGCCGGCGCCAGCGGCCTGACGGCGTGCAAGCACGCGCTGGCGAAGGGCTTCCGGCCGGTGGTCTTCGAGGCCGCCGGCGACGGCGTCGGCGGCGTGTGGAGGCGCACGCTGGCGTCGACGAGGCTGCAGACGCCGGCGTTCGCCTACCGGTTCTCCGACTTCCCGTGGCCGGCGGACGTGTCGGGCGCCGAGGTGTTCCCGCGGCACGACCAGGTGGTCGAATACCTCGCCGCCTACGCGCGGCGCCACGGCGTGACGGAGTGCGTCCGGTTCGGCTGCAAGGTGCTCGCCGCCGAGTACGCCGGGGTGCCCGATGAGGAGGCGGCGGCGTGGGAGCGGTGGTCGGGGAATGGCGAGGCCTTCGGCGACGGCTCCGGCGAGTGGCTTCTCACGGTGCAGCACCCTGGATCCGAAGCTACCCAGATACACAGGGTCGATTTCCTGATACTCTGCACTGGGAGATTCAGTGGAGTTGCCCACACCCCAACATTTCCACCCAACCGAGGCCCCGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGGCCACGCCGCCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCTTCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGTGGCAGGTATCCGTGCGCCATGATCTGCCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTGTGGGGCGTCAGCCTTGGACACCTCTTCTGCAACCGGCTGGCCGAGCTCACCGTTCACAAGCCCGGCGAGGGGCTTGCATTGGCCCTCCTCGCAATTCTGCTCACCCCTTTGAGATGGCTGCTGTCGAAGCCGGCAGAGACCTACTTCAAGATGCAGATCCCGATGGAGAAGCACGGGATGGTGCCGGAGGAGAGCTTCGCGGGATCAATGTCGGGCTGCCGGCTCGGAGTCCTCCCCGACAAGTTCTACGACAGGGTGGAGGAAGGCAGCATCCTGATCAAGAGGGCAAGATCTTTCAGCTTCTGCACGGACGGCTTGGTGCTCGACGACGACGACACCGGCGAGCGCGTCGACGCCGACGTCGTCGTGCTCGCCACCGGCTTCCGTGGCGACCAGAAGCTCACGGACATGTTCGTCTCGGCGACGTTCAAGCAGCAGATAGTAGCAGCTCCTCTGTACAGGTGATACTCCGCACATCGCCGTCAACGATCCGTTCGCCGGCGAGCCGGCCAGCGTCTCGCCGCCGATGAGCATTCATTCGTTCGTGCAGGCAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGATCGGGTACACCGAGAACCTGACGAGCATCTACACCTTCGAGATGATGGCCAAGTGGGTGGCGCACCTCCTCGCCGGCGCGTTCCGGCTGCCGAGCGTCGTGCGGATGGAGGCGAGCGCGGCGGAGTGGGACGAACACCTGGCGATGAGGAGGCACGGCGAGGGCGGCGGCGGCAAGCCGTGCCTCGGCGGCGTTAGCACGTGGTACAACGACGAGATGTGCCGGGACATGGGGTACGAGCCGAGGAGGAAGAAAGGGATTCTTGCAGCTACGCTGGTATCCTCTGAAGTCTGAACTCAAGTGAAACTGATCAGTGATCGATCGATCACTGATGTGTTGATCACGAGTATACGATAAAAAAGAACATGAACTTTGGAATTGTTGGGCTTTCAGAAAGGGGAAAATAAGTTGGGCTGCGATATGAAGAGGAAAATAAGTCGAGGAAATAAGCGTTGTTCCAAAACTTTGTTGCATCGCCCATCGTTCTTCTGCAAAACATTGTTCGTGTATATCTATTTCCGTCTGGCTAAAATCTAACAGAGAGCACGATACCTTTTCGAGATATACATGTGTGATGTGTCTGAAAAAAACAAGAGTATATGGCCTCATTTGATTTAAAGGAAATTCATA]
[+] EMBL AK071914 [ATGCGACCAAGAAGCGTGTGGCCATCGTCGGCGCCGGCGCCAGCGGCCTGACGGCGTGCAAGCACGCGCTGGCGAAGGGCTTCCGGCCGGTGGTCTTCGAGGCCGCCGGCGACGGCGTCGGCGGCGTGTGGAGGCGCACGCTGGCGTCGACGAGGCTGCAGACGCCGGCGTTCGCCTACCGGTTCTCCGACTTCCCGTGGCCGGCGGACGTGTCGGGCGCCGAGGTGTTCCCGCGGCACGACCAGGTGGTCGAATACCTCGCCGCCTACGCGCGGCGCCACGGCGTGACGGAGTGCGTCCGGTTCGGCTGCAAGGTGCTCGCCGCCGAGTACGCCGGGGTGCCCGATGAGGAGGCGGCGGCGTGGGAGCGGTGGTCGGGGAATGGCGAGGCCTTCGGCGACGGCTCCGGCGAGTGGCTTCTCACGGTGCAGCACCCTGGATCCGAAGCTACCCAGATACACAGGGTCGATTTCCTGATACTCTGCACTGGGAGATTCAGTGGAGTTGCCCACACCCCAACATTTCCACCCAACCGAGGCCCCGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGGCCACGCCGCCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCTTCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGTGGCAGGTATCCGTGCGCCATGATCTGCCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTGTGGGGCGTCAGCCTTGGACACCTCTTCTGCAACCGGCTGGCCGAGCTCACCGTTCACAAGCCCGGCGAGGGGCTTGCATTGGCCCTCCTCGCAATTCTGCTCACCCCTTTGAGATGGCTGCTGTCGAAGCCGGCAGAGACCTACTTCAAGATGCAGATCCCGATGGAGAAGCACGGGATGGTGCCGGAGGAGAGCTTCGCGGGATCAATGTCGGGCTGCCGGCTCGGAGTCCTCCCCGACAAGTTCTACGACAGGGTGGAGGAAGGCAGCATCCTGATCAAGAGGGCAAGATCTTTCAGCTTCTGCACGGACGGCTTGGTGCTCGACGACGACGACACCGGCGAGCGCGTCGACGCCGACGTCGTCGTGCTCGCCACCGGCTTCCGTGGCGACCAGAAGCTCACGGACATGTTCGTCTCGGCGACGTTCAAGCAGCAGATAGTAGCAGCTCCTCTGTACAGGTGATACTCCGCACATCGCCGTCAACGATCCGTTCGCCGGCGAGCCGGCCAGCGTCTCGCCGCCGATGAGCATTCATTCGTTCGTGCAGGCAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGATCGGGTACACCGAGAACCTGACGAGCATCTACACCTTCGAGATGATGGCCAAGTGGGTGGCGCACCTCCTCGCCGGCGCGTTCCGGCTGCCGAGCGTCGTGCGGATGGAGGCGAGCGCGGCGGAGTGGGACGAACACCTGGCGATGAGGAGGCACGGCGAGGGCGGCGGCGGCAAGCCGTGCCTCGGCGGCGTTAGCACGTGGTACAACGACGAGATGTGCCGGGACATGGGGTACGAGCCGAGGAGGAAGAAAGGGATTCTTGCAGCTACGCTGGTATCCTCTGAAGTCTGAACTCAAGTGAAACTGATCAGTGATCGATCGATCACTGATGTGTTGATCACGAGTATACGATAAAAAAGAACATGAACTTTGGAATTGTTGGGCTTTCAGAAAGGGGAAAATAAGTTGGGCTGCGATATGAAGAGGAAAATAAGTCGAGGAAATAAGCGTTGTTCCAAAACTTTGTTGCATCGCCCATCGTTCTTCTGCAAAACATTGTTCGTGTATATCTATTTCCGTCTGGCTAAAATCTAACAGAGAGCACGATACCTTTTCGAGATATACATGTGTGATGTGTCTGAAAAAAACAAGAGTATATGGCCTCATTTGATTTAAAGGAAATTCATA]
[+] EMBL CB652408 [ CATCGCCCTCGCCGGCGCCAGCGGCCTGACGGCGTGCAAGCACGCGCTGGCGAAGGGCTTCCGGCCGGTGGTCTTCGAGGCCGCCGGCGACGGCGTCGGCGGCGTGTGGAGGCGCACGCTGGCGTCGACGAGGCTGCAGACGCCGGCGTTCGCCTACCGGTTCTCCGACTTCCCGTGGCCGGCGGACGTGTCGGGCGCCGAGGTGTTCCCGCGGCACGACCAGGTGGTCGAATACCTCGCCGCCTACGCGCGGCGCCACGGCGTGACGGAGTGCGTCCGGTTCGGCTGCAAGGTGCTCGCCGCCGAGTACGCCGGGGTGCCCGATGAGGAGGCGGCGGCGTGGGAGCGGTGGTCGGGGAATGGCGAGGCCTTCGGCGACGGCTCCGGCGAGTGGCTTCTCACGGTGCAGCACCCTGGATCCGAAGCTACCCAGATACACAGGGTCGATTTCCTGATACTCTGCACTGGGAGATTCAGTGGAGTTGCCCACACCCCAACATTTCCACCCAACCGAGGCCCCGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGGCCACGCCGCCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCTTCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGTGGCAGGTATCCGTGCGCCATGATCTGCCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTGTGGGGCGTCAGCCTTGGACACCTCTTCTGNCACCGGCTGGCCGAGCTCACCGTTCACAAGCCCGGCGAGGGGCTTG ]
[+] EMBL CB651908 [ CATCGTCCGCGCCGGCGCCAGCGGCCTGACGGCGTGCAAGCACGCGCTGGCGAAGGGCTTCCGGCCGGTGGTCTTCGAGGCCGCCGGCGACGGCGTCGGCGGCGTGTGGAGGCGCACGCTGGCGTCGACGAGGCTGCAGACGCCGGCGTTCGCCTACCGGTTCTCCGACTTCCCGTGGCCGGCGGACGTGTCGGGCGCCGAGGTGTTCCCGCGGCACGACCAGGTGGTCGAATACCTCGCCGCCTACGCGCGGCGCCACGGCGTGACGGAGTGCGTCCGGTTCGGCTGCAAGGTGCTCGCCGCCGAGTACGCCGGGGTGCCCGATGAGGAGGCGGCGGCGTGGGAGCGGTGGTCGGGGAATGGCGAGGCCTTCGGCGACGGCTCCGGCGAGTGGCTTCTCACGGTGCAGCACCCTGGATCCGAAGCTACCCAGATACACAGGGTCGATTTCCTGATACTCTGCACTGGGAGATTCAGTGGAGTTGCCCACACCCCAACATTTCCACCCAACCGAGGCCCCGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGGCCACGCCGCCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCTTCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGTGGCAGGTATCCGTGCGCCATGATCTGCCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTGTGGGGCGTCAGCCTTGGACACCTCTTCTGCAAC ]
consensusID : consensus_10869#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1828 fasta sequence
[TGCGACCAAGAAGCGTGTGGCCATCGTCGGCGCCGGCGCCAGCGGCCTGACGGCGTGCAAGCACGCGCTGGCGAAGGGCTTCCGGCCGGTGGTCTTCGAGGCCGCCGGCGACGGCGTCGGCGGCGTGTGGAGGCGCACGCTGGCGTCGACGAGGCTGCAGACGCCGGCGTTCGCCTACCGGTTCTCCGACTTCCCGTGGCCGGCGGACGTGTCGGGCGCCGAGGTGTTCCCGCGGCACGACCAGGTGGTCGAATACCTCGCCGCCTACGCGCGGCGCCACGGCGTGACGGAGTGCGTCCGGTTCGGCTGCAAGGTGCTCGCCGCCGAGTACGCCGGGGTGCCCGATGAGGAGGCGGCGGCGTGGGAGCGGTGGTCGGGGAATGGCGAGGCCTTCGGCGACGGCTCCGGCGAGTGGCTTCTCACGGTGCAGCACCCTGGATCCGAAGCTACCCAGATACACAGGGTCGATTTCCTGATACTCTGCACTGGGAGATTCAGTGGAGTTGCCCACACCCCAACATTTCCACCCAACCGAGGCCCCGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGACCACGCCGCCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCTTCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGTGGCAGGTATCCGTGCGCCATGATCTGTCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTGTGGGGCGTCAGCCTTGGACACCTCTTCTGCAACCGGCTGGCCGAGCTCACCGTTCACAAGCCCGGCGAGGGGCTTGCATTGGCCCTCCTCGCAATTCTGCTCACCCCTTTGAGATGGCTGCTGTCGAAGCTGGCAGAGACCTACTTCAAGATGCAGATCCCGATGGAGAAGCACGGGATGGTGCCGGAGGAGAGCTTCGCGGGATCAATGTCGGGCTGCCGGCTCGGAGTCCTCCCCGACAAGTTCTACGACAGGGTGGAGGAAGGCAGCATCCTGATCAAGAGGGCAAGATCTTTCAGCTTCTGCACGGACGGCTTGGTGCTCGACGACGACGACACCGGCGAGCGCGTCGACGCCGACGTCGTCGTGCTCGCCACCGGCTTCCGTGGCGACCAGAAGCTCACGGACATGTTCGTCTCGGCGACGTTCAAGCAGCAGATAGTAGCAGCTCCTCTGTACAGGCAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGATCGGGTACACCGAGAACCTGACGAGCATCTACACCTTCGAGATGATGGCCAAGTGGGTGGCGCACCTCCTCGCCGGCGCGTTCCGGCTGCCGAGCGTCGTGCGGATGGAGGCGAGCGCGGCGGAGTGGGACGAACACCTGGCGATGAGGAGGCACGGCGAGGGCGGCGGCGGCAAGCCGTGCCTCGGCGGCGTTAGCACGTGGTACAACGACGAGATGTGCCGGGACATGGGGTACGAGCCGAGGAGGAAGAAAGGGATTCTTGCAGCTACGCTGGTATCCTCTGAAGTCTGAACTCAAGTGAAACTGATCAGTGATCGATCGATCACTGATGTGTTGATCACGAGTATACGATAAAAAAGAACATGAACTTTGGAATTGTTGGGCTTTCAGAAAGGGGAAAATAAGTTGGGCTGCGATATGAAGAGGAAAATAAGTCGAGGAAATAAGCGTTGTTCCAAAACTTTGTTGCATCGCCCATCGTTCTTCTGCAAAACATTGTTCGTGTATATCTATTTCCGTCTGGCTAAAATCTAACAGAGAGCACGATACCTTTTCGAGATAAAAAAAAGA]
[+] EMBL AK106056 [TGCGACCAAGAAGCGTGTGGCCATCGTCGGCGCCGGCGCCAGCGGCCTGACGGCGTGCAAGCACGCGCTGGCGAAGGGCTTCCGGCCGGTGGTCTTCGAGGCCGCCGGCGACGGCGTCGGCGGCGTGTGGAGGCGCACGCTGGCGTCGACGAGGCTGCAGACGCCGGCGTTCGCCTACCGGTTCTCCGACTTCCCGTGGCCGGCGGACGTGTCGGGCGCCGAGGTGTTCCCGCGGCACGACCAGGTGGTCGAATACCTCGCCGCCTACGCGCGGCGCCACGGCGTGACGGAGTGCGTCCGGTTCGGCTGCAAGGTGCTCGCCGCCGAGTACGCCGGGGTGCCCGATGAGGAGGCGGCGGCGTGGGAGCGGTGGTCGGGGAATGGCGAGGCCTTCGGCGACGGCTCCGGCGAGTGGCTTCTCACGGTGCAGCACCCTGGATCCGAAGCTACCCAGATACACAGGGTCGATTTCCTGATACTCTGCACTGGGAGATTCAGTGGAGTTGCCCACACCCCAACATTTCCACCCAACCGAGGCCCCGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGACCACGCCGCCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCTTCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGTGGCAGGTATCCGTGCGCCATGATCTGTCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTGTGGGGCGTCAGCCTTGGACACCTCTTCTGCAACCGGCTGGCCGAGCTCACCGTTCACAAGCCCGGCGAGGGGCTTGCATTGGCCCTCCTCGCAATTCTGCTCACCCCTTTGAGATGGCTGCTGTCGAAGCTGGCAGAGACCTACTTCAAGATGCAGATCCCGATGGAGAAGCACGGGATGGTGCCGGAGGAGAGCTTCGCGGGATCAATGTCGGGCTGCCGGCTCGGAGTCCTCCCCGACAAGTTCTACGACAGGGTGGAGGAAGGCAGCATCCTGATCAAGAGGGCAAGATCTTTCAGCTTCTGCACGGACGGCTTGGTGCTCGACGACGACGACACCGGCGAGCGCGTCGACGCCGACGTCGTCGTGCTCGCCACCGGCTTCCGTGGCGACCAGAAGCTCACGGACATGTTCGTCTCGGCGACGTTCAAGCAGCAGATAGTAGCAGCTCCTCTGTACAGGCAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGATCGGGTACACCGAGAACCTGACGAGCATCTACACCTTCGAGATGATGGCCAAGTGGGTGGCGCACCTCCTCGCCGGCGCGTTCCGGCTGCCGAGCGTCGTGCGGATGGAGGCGAGCGCGGCGGAGTGGGACGAACACCTGGCGATGAGGAGGCACGGCGAGGGCGGCGGCGGCAAGCCGTGCCTCGGCGGCGTTAGCACGTGGTACAACGACGAGATGTGCCGGGACATGGGGTACGAGCCGAGGAGGAAGAAAGGGATTCTTGCAGCTACGCTGGTATCCTCTGAAGTCTGAACTCAAGTGAAACTGATCAGTGATCGATCGATCACTGATGTGTTGATCACGAGTATACGATAAAAAAGAACATGAACTTTGGAATTGTTGGGCTTTCAGAAAGGGGAAAATAAGTTGGGCTGCGATATGAAGAGGAAAA ]
[+] EMBL OSS3009A [ ntgnGACACCTCTTCTGCAACCGGCTGGCCGAGCTCACCGTTCACAAGCCCGGCGAGGGGCTTGCATTGGCCCTCCTCGCAATTCTGCTCACCCCTTTGAGATGGCTGCTGTCGAAGCTGGCAGAGACCTACTTCAAGATGCAGATCCCGATGGAGAAGCACGGGATGGTGCCGGAGGAGAGCTTCGCGGGATCAATGTCGGGCTGCCGGCTCGGAGTCCTCCCCGACAAGTTCTACGACAGGGTGGAGGAAGGCAGCATCCTGATCAAGAGGGCAAGATCTTTCAGCTTCTGCACGGACGGCTTGGTGCTCG ]
[-] EMBL CB651909 [ TCCTGATCAAGAGGGCAAGATCTTTCAGCTTCTGCACGGACGGCTTGGTGCTCGACGACGACGACACCGGCGAGCGCGTCGACGCCGACGTCGTCGTGCTCGCCACCGGCTTCCGTGGCGACCAGAAGCTCACGGACATGTTCGTCTCGGCGACGTTCAAGCAGCAGATAGTAGCAGCTCCTCTGTACAGGCAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGATCGGGTACACCGAGAACCTGACGAGCATCTACACCTTCGAGATGATGGCCAAGTGGGTGGCGCACCTCCTCGCCGGCGCGTTCCGGCTGCCGAGCGTCGTGCGGATGGAGGCGAGCGCGGCGGAGTGGGACGAACACCTGGCGATGAGGAGGCACGGCGAGGGCGGCGGCGGCAAGCCGTGCCTCGGCGGCGTTAGCACGTGGTACAACGACGAGATGTGCCGGGACATGGGGTACGAGCCGAGGAGGAAGAAAGGGATTCTTGCAGCTACGCTGGTATCCTCTGAAGTCTGAACTCAAGTGAAACTGATCAGTGATCGATCGATCACTGATGTGTTGATCACGAGTATACGATAAAAAAGAACATGAACTTTGGAATTGTTGGGCTTTCAGAAAGGGGAAAATAAGTTGGGCTGCGATATGAAGAGGAAAATAAGTCGAGGAAATAAGCGTTGTTCCAAAACTTTGTTGCATCGCCCATCGTTCTTCTGCAAAACATTGTTCGTGTATATCTATTTCCGTCTGGCTAAAATCTAACAGAGAGCACGATACCTTTTCGAGATAAAAAAAAGA]
[+] EMBL AU174276 [ ACCTGGCGATGAGGAGGCACGGCGAGGGCGGCGGCGGCAANCCGTGCCTCGGCGGCGTTAGCACGTGGTACAACGACGAGATGTGCCGGGACATGGGGTACGAGCCGAGGAGGAAGAAAGGGATTCTTGCAGCTACGCTGGTATCCTCTGAAGTCTGAACTCAAGTGAAACTGATCAGTGATCGATCGATCACTGATGTGTTGATCACGAGTATACGATAAAAAAGAACATGAACTTTGGAATTGTTGGGCTTTCAGAAAGGGGAAAATAAGTTGGGCTGCGATATGAAGAGGAAAATAAGTCGAGGAAATAAGCGTTGTTCCAAAACTTTGTTGCATCGCCCATCGTTNTTNTGCAAAACATTGTTCGTGTATATCTATTTCCGTCTGGCTAAAATCTAACAGAGAGCACGATACCTTTTCGAGAAAAAAA ]
consensusID : consensus_10869#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 423 fasta sequence
[CGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGGCCACGCCGCCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCTTCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGTAAGATCCACATTTCGCGGCGAGAGTAATTAATCGATCTGTGATGAACTGTTGAGCGTGCGTGCTGCCTGCCATGGATCAGGTGGCAGGTATCCGTGCGCCATGATCTGCCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTGTGGGGCGTCAGCCTTGGACACCTCTTCTGCAACCGGCTGGCCGAGCTCACCGTTCACAAGCCCGGCGAGGGGCTTGCATTGGCCCTCCTCGCAATTCTGCTCACCCCTTTGGTTTGTGATGTTA]
[+] EMBL AU173204 [CGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGGCCACGCCGCCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCTTCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGTAAGATCCACATTTCGCGGCGAGAGTAATTAATCGATCTGTGATGAACTGTTGAGCGTGCGTGCTGCCTGCCATGGATCAGGTGGCAGGTATCCGTGCGCCATGATCTGCCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTGTGGGGCGTCAGCCTTGGACACCTCTTCTGCAACCGGCTGGCCGAGCTCACCGTTCACAAGCCCGGCGAGGGGCTTGCATTGGCCCTCCTCGCAATTCTGCTCACCCCTTTGGTTTGTGATGTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10869#0 ATGCGACCAAGAAGCGTGTGGCCATCGTCCGCGCCGGCGCCAGCGGCCTGACGGCGTGCA 60
consensus_10869#1 -TGCGACCAAGAAGCGTGTGGCCATCGTCGGCGCCGGCGCCAGCGGCCTGACGGCGTGCA 59
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 AGCACGCGCTGGCGAAGGGCTTCCGGCCGGTGGTCTTCGAGGCCGCCGGCGACGGCGTCG 120
consensus_10869#1 AGCACGCGCTGGCGAAGGGCTTCCGGCCGGTGGTCTTCGAGGCCGCCGGCGACGGCGTCG 119
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 GCGGCGTGTGGAGGCGCACGCTGGCGTCGACGAGGCTGCAGACGCCGGCGTTCGCCTACC 180
consensus_10869#1 GCGGCGTGTGGAGGCGCACGCTGGCGTCGACGAGGCTGCAGACGCCGGCGTTCGCCTACC 179
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 GGTTCTCCGACTTCCCGTGGCCGGCGGACGTGTCGGGCGCCGAGGTGTTCCCGCGGCACG 240
consensus_10869#1 GGTTCTCCGACTTCCCGTGGCCGGCGGACGTGTCGGGCGCCGAGGTGTTCCCGCGGCACG 239
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 ACCAGGTGGTCGAATACCTCGCCGCCTACGCGCGGCGCCACGGCGTGACGGAGTGCGTCC 300
consensus_10869#1 ACCAGGTGGTCGAATACCTCGCCGCCTACGCGCGGCGCCACGGCGTGACGGAGTGCGTCC 299
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 GGTTCGGCTGCAAGGTGCTCGCCGCCGAGTACGCCGGGGTGCCCGATGAGGAGGCGGCGG 360
consensus_10869#1 GGTTCGGCTGCAAGGTGCTCGCCGCCGAGTACGCCGGGGTGCCCGATGAGGAGGCGGCGG 359
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 CGTGGGAGCGGTGGTCGGGGAATGGCGAGGCCTTCGGCGACGGCTCCGGCGAGTGGCTTC 420
consensus_10869#1 CGTGGGAGCGGTGGTCGGGGAATGGCGAGGCCTTCGGCGACGGCTCCGGCGAGTGGCTTC 419
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 TCACGGTGCAGCACCCTGGATCCGAAGCTACCCAGATACACAGGGTCGATTTCCTGATAC 480
consensus_10869#1 TCACGGTGCAGCACCCTGGATCCGAAGCTACCCAGATACACAGGGTCGATTTCCTGATAC 479
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 TCTGCACTGGGAGATTCAGTGGAGTTGCCCACACCCCAACATTTCCACCCAACCGAGGCC 540
consensus_10869#1 TCTGCACTGGGAGATTCAGTGGAGTTGCCCACACCCCAACATTTCCACCCAACCGAGGCC 539
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 CCGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGGCCACGCCG 600
consensus_10869#1 CCGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGACCACGCCG 599
consensus_10869#2 -CGAAGTGTTCCACGGCCAAGTGCTTCACTCCATGGACTACTCCAACATGGGCCACGCCG 59
************************************************** ********
consensus_10869#0 CCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCT 660
consensus_10869#1 CCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCT 659
consensus_10869#2 CCGCCGACGAGCTGATCAGAGGCAAGCGCGTCGCCGTCGTCGGCTCCGGCAAGTCGGCCT 119
************************************************************
consensus_10869#0 TCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGT------------------------- 695
consensus_10869#1 TCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGT------------------------- 694
consensus_10869#2 TCGACACGGTGGCGGAGTGCGCCGCTGCAAACGGTAAGATCCACATTTCGCGGCGAGAGT 179
***********************************
consensus_10869#0 ---------------------------------------------------------GGC 698
consensus_10869#1 ---------------------------------------------------------GGC 697
consensus_10869#2 AATTAATCGATCTGTGATGAACTGTTGAGCGTGCGTGCTGCCTGCCATGGATCAGGTGGC 239
***
consensus_10869#0 AGGTATCCGTGCGCCATGATCTGCCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTG 758
consensus_10869#1 AGGTATCCGTGCGCCATGATCTGTCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTG 757
consensus_10869#2 AGGTATCCGTGCGCCATGATCTGCCGGAGCGGGCGGTGGATGGTGAACGGCGGGTTCGTG 299
*********************** ************************************
consensus_10869#0 TGGGGCGTCAGCCTTGGACACCTCTTCTGCAACCGGCTGGCCGAGCTCACCGTTCACAAG 818
consensus_10869#1 TGGGGCGTCAGCCTTGGACACCTCTTCTGCAACCGGCTGGCCGAGCTCACCGTTCACAAG 817
consensus_10869#2 TGGGGCGTCAGCCTTGGACACCTCTTCTGCAACCGGCTGGCCGAGCTCACCGTTCACAAG 359
************************************************************
consensus_10869#0 CCCGGCGAGGGGCTTGCATTGGCCCTCCTCGCAATTCTGCTCACCCCTTTGAGATGGCTG 878
consensus_10869#1 CCCGGCGAGGGGCTTGCATTGGCCCTCCTCGCAATTCTGCTCACCCCTTTGAGATGGCTG 877
consensus_10869#2 CCCGGCGAGGGGCTTGCATTGGCCCTCCTCGCAATTCTGCTCACCCCTTTGGTTTG--TG 417
*************************************************** ** **
consensus_10869#0 CTGTCGAAGCCGGCAGAGACCTACTTCAAGATGCAGATCCCGATGGAGAAGCACGGGATG 938
consensus_10869#1 CTGTCGAAGCTGGCAGAGACCTACTTCAAGATGCAGATCCCGATGGAGAAGCACGGGATG 937
consensus_10869#2 ATGTTA------------------------------------------------------ 423
***
consensus_10869#0 GTGCCGGAGGAGAGCTTCGCGGGATCAATGTCGGGCTGCCGGCTCGGAGTCCTCCCCGAC 998
consensus_10869#1 GTGCCGGAGGAGAGCTTCGCGGGATCAATGTCGGGCTGCCGGCTCGGAGTCCTCCCCGAC 997
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 AAGTTCTACGACAGGGTGGAGGAAGGCAGCATCCTGATCAAGAGGGCAAGATCTTTCAGC 1058
consensus_10869#1 AAGTTCTACGACAGGGTGGAGGAAGGCAGCATCCTGATCAAGAGGGCAAGATCTTTCAGC 1057
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 TTCTGCACGGACGGCTTGGTGCTCGACGACGACGACACCGGCGAGCGCGTCGACGCCGAC 1118
consensus_10869#1 TTCTGCACGGACGGCTTGGTGCTCGACGACGACGACACCGGCGAGCGCGTCGACGCCGAC 1117
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 GTCGTCGTGCTCGCCACCGGCTTCCGTGGCGACCAGAAGCTCACGGACATGTTCGTCTCG 1178
consensus_10869#1 GTCGTCGTGCTCGCCACCGGCTTCCGTGGCGACCAGAAGCTCACGGACATGTTCGTCTCG 1177
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 GCGACGTTCAAGCAGCAGATAGTAGCAGCTCCTCTGTACAGGTGATACTCCGCACATCGC 1238
consensus_10869#1 GCGACGTTCAAGCAGCAGATAGTAGCAGCTCCTCTGTACAGG------------------ 1219
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 CGTCAACGATCCGTTCGCCGGCGAGCCGGCCAGCGTCTCGCCGCCGATGAGCATTCATTC 1298
consensus_10869#1 ------------------------------------------------------------
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 GTTCGTGCAGGCAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGATCGGGTACACCG 1358
consensus_10869#1 -----------CAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGATCGGGTACACCG 1268
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 AGAACCTGACGAGCATCTACACCTTCGAGATGATGGCCAAGTGGGTGGCGCACCTCCTCG 1418
consensus_10869#1 AGAACCTGACGAGCATCTACACCTTCGAGATGATGGCCAAGTGGGTGGCGCACCTCCTCG 1328
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 CCGGCGCGTTCCGGCTGCCGAGCGTCGTGCGGATGGAGGCGAGCGCGGCGGAGTGGGACG 1478
consensus_10869#1 CCGGCGCGTTCCGGCTGCCGAGCGTCGTGCGGATGGAGGCGAGCGCGGCGGAGTGGGACG 1388
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 AACACCTGGCGATGAGGAGGCACGGCGAGGGCGGCGGCGGCAAGCCGTGCCTCGGCGGCG 1538
consensus_10869#1 AACACCTGGCGATGAGGAGGCACGGCGAGGGCGGCGGCGGCAAGCCGTGCCTCGGCGGCG 1448
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 TTAGCACGTGGTACAACGACGAGATGTGCCGGGACATGGGGTACGAGCCGAGGAGGAAGA 1598
consensus_10869#1 TTAGCACGTGGTACAACGACGAGATGTGCCGGGACATGGGGTACGAGCCGAGGAGGAAGA 1508
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 AAGGGATTCTTGCAGCTACGCTGGTATCCTCTGAAGTCTGAACTCAAGTGAAACTGATCA 1658
consensus_10869#1 AAGGGATTCTTGCAGCTACGCTGGTATCCTCTGAAGTCTGAACTCAAGTGAAACTGATCA 1568
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 GTGATCGATCGATCACTGATGTGTTGATCACGAGTATACGATAAAAAAGAACATGAACTT 1718
consensus_10869#1 GTGATCGATCGATCACTGATGTGTTGATCACGAGTATACGATAAAAAAGAACATGAACTT 1628
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 TGGAATTGTTGGGCTTTCAGAAAGGGGAAAATAAGTTGGGCTGCGATATGAAGAGGAAAA 1778
consensus_10869#1 TGGAATTGTTGGGCTTTCAGAAAGGGGAAAATAAGTTGGGCTGCGATATGAAGAGGAAAA 1688
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 TAAGTCGAGGAAATAAGCGTTGTTCCAAAACTTTGTTGCATCGCCCATCGTTCTTCTGCA 1838
consensus_10869#1 TAAGTCGAGGAAATAAGCGTTGTTCCAAAACTTTGTTGCATCGCCCATCGTTCTTCTGCA 1748
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 AAACATTGTTCGTGTATATCTATTTCCGTCTGGCTAAAATCTAACAGAGAGCACGATACC 1898
consensus_10869#1 AAACATTGTTCGTGTATATCTATTTCCGTCTGGCTAAAATCTAACAGAGAGCACGATACC 1808
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 TTTTCGAGATATACATGTGTGATGTGTCTGAAAAAAACAAGAGTATATGGCCTCATTTGA 1958
consensus_10869#1 TTTTCGAGATAAAAAAAAGA---------------------------------------- 1828
consensus_10869#2 ------------------------------------------------------------
consensus_10869#0 TTTAAAGGAAATTCATA 1975
consensus_10869#1 -----------------
consensus_10869#2 -----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||