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Oryza sativa
cluster # 10872 cluster # 10872       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10872#0 length = 1131 sequences # 5  
consensus_10872#1 length = 1039 sequences # 2  
consensus_10872#2 length = 769 sequences # 1  

consensusID : consensus_10872#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1131
fasta sequence
                              [CACCTGCCTGCTGGTGTGTATCTTAAAACATTTCCCTTTAATTTACGAAGGAAAGAGTTTATTCCACAACCTCAATTCTTCTGAAAGTCTAGAAATCAACTCCCTCAAATTCTTAACACCATCACTTTACCCGCAGTAGTTTGGGTAACTGAAAATATGTGATCAATTTGTTGTTATAATGGGAATTTTGATAGCTCTAATTATTGCTTAAAATAACGGTAATCATGTGTCATATTTTCTGTTCATTAGCGAATCAAACCCTGTACAGGACTACAAGAAAATTCCTTCCTTTCAGCTGTGTTAAAAAATGGTACCTCCCAATCATGCAATAGTTTTTTTTTTTAAAGTCCGTCAACCATGCAATAGTAACTCAGAAATATTGTGATACATCACATGTGCATAGGAACACACACTATTACAATTCAAAATACTAGCACATGCATACTTTTCTGGGTAATCACTTAATTGATGATCCTATATGCTCTATCGAGATCTTGTTCTGCTCGAATAGGATGCCGGATTGGGCTGAAATGGCATCATCACTTAACCAGCTATCGGACTCTGAGGTCGTGTTGCAGTGCTCCACCTCTCCAGCTGCCGAGCCACCACATTTTGTGGAAAATGAGAGAAGGATATGGAGATACTTGATTGAAAATCCATATTGGCAAGACACATTTCCGAAATACAAGCCTCGGGTCTTCCATAGGACCAGTGATGGAAGGTGGTCACGTTACTCAATAGTATCATCCAGCTAACATTGGTGCTCTCTCTACATGCGGAACAAGGGGATATATACTTCATATATAATCTCTCCTTTGTTAGAACCTGTGATAGATTGTGGTGTGGCAACACAGGATTTCTTCTGAACAGCGGGCATCAATCCCAGTCGATTCTAGATTTCTTTCTCCTGTGAGTTGTCCCATGTAATCATCCTTGGAAGGTGAATGAGGAATTATTCAGATTTTCCCCGTAGACGCACAGAAGTCTCAAGTTGATGTATTAGCACAGAACCTGTGTTAGGATTGTTGATTGATAGGCAACATGGATGATGGCATTCCGTTCTCGTCTCATATGCTCCGACCATTGTTACTTGGTATTTTCTGAAGGGAACATTTTTCATTTTGGCAAAAA]

[+] EMBL CA999988             [CACCTGCCTGCTGGTGTGTATCTTAAAACATTTCCCTTTAATTTACGAAGGAAAGAGTTTATTCCACAACCTCAATTCTTCTGAAAGTCTAGAAATCAACTCCCTCAAATTCTTAACACCATCACTTTACCCGCAGTAGTTTGGGTAACTGAAAATATGTGATCAATTTGTTGTTATAATGGGAATTTTGATAGCTCTAATTATTGCTTAAAATAACGGTAATCATGTGTCATATTTTCTGTTCATTAGCGAATCAAACCCTGTACAGGACTACAAGAAAATTCCTTCCTTTCAGCTGTGTTAAAAAATGGTACCTCCCAATCATGCAATAGTTTTTTTTTTTAAAGTCCGTCAACCATGCAATAGTAACTCAGAAATATTGTGATACATCACATGTGCATAGGAACACACACTATTACAATTCAAAATACTAGCACATGCATACTTTTCTGGGTAATCACTTAATTGATGATCCTATATGCTCTATCGAGATCTTGTTCTGCTCGAATAGGATGCCGGATTGGGCTGAAATGGCATCATCACTTAACCAGCTATCGGACTCTGAGGTCGTGTTGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSR21442A            [                                                                 ACAACCTCAATTCTTCTGAAAGTCTAGAAATCAACTCCCTCAAATTCTTAACACCATCACTTTACCCGCAGTAGTTTGGGTAACTGAAAATATGTGATCAATTTGTTGTTATAATGGGAATTTTGATAGCTCTAATTATTGCTTAAAATAACGGTAATCATGTGTCATATTTTCTGTTCATTAGCGAATCAAACCCTGTACAGGACTACAAGAAAATTCCTTCCTTTCAGCTGTGTTAAAAAATGGTACCTCCCAATCATGCAATAGTTTTTTTTTTTAAAGTCCGTCAACCATGCANTAGTAACTCAGAAATATTGTGATACATCACATGTGCATAGGNNCACACACTATTACAATTCAAAATACTAGCACATGCATACTTTTCTGGGNAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSR26111A            [                                                                 ACAACCTCAATTCTTCTGAAAGTCTAGAAATCAACTCCCTCAAATTCTTAACACCATCACTTTACCCGCAGTAGTTTGGGTAACTGAAAATATGTGATCAATTTGTTGTTATAATGGGAATTTTGATAGCTCTAATTATTGCTTAAAATAACGGTAATCATGTGTCATATTTTCTGTTCATTAGCGAATCAAACCCTGTACAGGACTACAAGAAAATTCCTTCCTTTCAGCTGTGTTAAAAAATGGTACCTCCCAATCATGCAATAGTTTTTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB645152             [                                                                                                                                                                                                                                                                                                                                                                 AACCATGCAATAGTAACTCAGAAATATTGTGATACATCACATGTGCATAGGAACACACACTATTACAATTCAAAATACTAGCACATGCATACTTTTCTGGGTAATCACTTAATTGATGATCCTATATGCTCTATCGATATCTTGTTCTGCTCGTATAGGATGCCGGATTGGGCTGAAATGGCATCATCACTTAACCAGCTATCGGACTCTGAGGTCTTGTTGCAGTGCTCCACCTCTCCAGCTGCCGAGCCACCACATTTTGTGGAAAATGAGAGAAGGATATGGAGATACTTGATTGAAAATCCATATTGGCAAGACACATTTCCGAAATACAAGCCTCGGGTCTTCCATAGGACCAGTGATGGAAGGTGGTCACGTTACTCAATAGTATCATCCAGCTAACATTGGTGCTCTCTCTACATGCGGAACAAGGGGATATATACTTCATATATAATCTCTCCTTTGTTAGAACCTGTGATAGATTGTGGTGTGGCAACACAGGATTTCTTCTGAACAGCGGGCATCAATCCCAGTCGATTCTAGATTTCTTTCTCCTGTGAGTTGTCCCATGTAATCATCCTTGGAAGGTGAATGAGGAATTATTCAGATTTTCCCCGTAGACGCACAGAAGTCTCAAGTTGATGTATTAGCACAGAACCTGTGTTAGGATTGTTGATTGATAGGCAACATGGATGATGGCATTCCGTTCTCGTCTCATATGCTCCGACCATTGTTACTTGGTATTTTCTGAAGGGAACATTTTT              ]
[+] EMBL AU173318             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CATAGGACCAGTGATGGAAGGTGGTCACGTTACTCAATAGTATCATCCAGCTAACATTGGTGCTCTCTCTACATGCGGAACAAGGGGATATATACTTCATATATAATCTCTCCTTTGTTAGAACCTGTGATAGATTGTGGTGTGGCAACACAGGATTTCTTNTGAACAGCGGGCATCAATCCCAGTCGATTCTAGATTTCTTTCTCCTGTGAGTTGTCCCATGTAATCATCCTTGGAAGGTGAATGAGGAATTATTCAGATTTTCCCCGTAGACGCACAGAAGTCTCAAGTTGATGTATTAGCACAGAACCTGTGTTAGGATTGTTGATTGATAGGCAACATGGATGATGGCATTCCGTTCTCGTCTCATATGCTCCGACCATTGTTACTTGGTATTTTCTGAAGGGAACATTTTTCATTTTGGCAAAAA]


>consensus_10872#0 CACCTGCCTGCTGGTGTGTATCTTAAAACATTTCCCTTTAATTTACGAAGGAAAGAGTTT ATTCCACAACCTCAATTCTTCTGAAAGTCTAGAAATCAACTCCCTCAAATTCTTAACACC ATCACTTTACCCGCAGTAGTTTGGGTAACTGAAAATATGTGATCAATTTGTTGTTATAAT GGGAATTTTGATAGCTCTAATTATTGCTTAAAATAACGGTAATCATGTGTCATATTTTCT GTTCATTAGCGAATCAAACCCTGTACAGGACTACAAGAAAATTCCTTCCTTTCAGCTGTG TTAAAAAATGGTACCTCCCAATCATGCAATAGTTTTTTTTTTTAAAGTCCGTCAACCATG CAATAGTAACTCAGAAATATTGTGATACATCACATGTGCATAGGAACACACACTATTACA ATTCAAAATACTAGCACATGCATACTTTTCTGGGTAATCACTTAATTGATGATCCTATAT GCTCTATCGAGATCTTGTTCTGCTCGAATAGGATGCCGGATTGGGCTGAAATGGCATCAT CACTTAACCAGCTATCGGACTCTGAGGTCGTGTTGCAGTGCTCCACCTCTCCAGCTGCCG AGCCACCACATTTTGTGGAAAATGAGAGAAGGATATGGAGATACTTGATTGAAAATCCAT ATTGGCAAGACACATTTCCGAAATACAAGCCTCGGGTCTTCCATAGGACCAGTGATGGAA GGTGGTCACGTTACTCAATAGTATCATCCAGCTAACATTGGTGCTCTCTCTACATGCGGA ACAAGGGGATATATACTTCATATATAATCTCTCCTTTGTTAGAACCTGTGATAGATTGTG GTGTGGCAACACAGGATTTCTTCTGAACAGCGGGCATCAATCCCAGTCGATTCTAGATTT CTTTCTCCTGTGAGTTGTCCCATGTAATCATCCTTGGAAGGTGAATGAGGAATTATTCAG ATTTTCCCCGTAGACGCACAGAAGTCTCAAGTTGATGTATTAGCACAGAACCTGTGTTAG GATTGTTGATTGATAGGCAACATGGATGATGGCATTCCGTTCTCGTCTCATATGCTCCGA CCATTGTTACTTGGTATTTTCTGAAGGGAACATTTTTCATTTTGGCAAAAA



consensusID : consensus_10872#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1039
fasta sequence
                              [TCCCTTCCGCGACGCGGCGGCGACTCCGGCGACGCGACATCGGCGATGCTCCTCGTCGACGGCGAGCCCGTCTCCGCCTCCGCCTCCCCCACCTTCGGCTCCTCCCGCGGGGGGAGCGGCGGGAGGGAGCTGGTGGCGGCGCTCATGGGGAACCCCGGGCTCCGCGCCGCATCGGAGAGGCTCAGGGCGGAGCCGGAGAGGCGGATCTCGTCGGGGCCAGAGGAGGATGATGCGGACGCCGCGGCGGCGGCGGCGCCGAGGCACGTGTACGTGTTCCAGCGGGAGTTCGCCACGGTTGATCCGGCGCGCGTCGAGTTAGTGGGCACAGATGAGGTGACTACATGCGTGGGTGTAGTAATTCGCAACAACAAGACTGGAATGTAAGTGAAAAAGGAAGTGAGCATTTAAGCTGAACCTGACCTCCATTAGCCACATGGACTTCCCAAAAATTGTGGAGGGAGGGCTCAAACAGATGTTAGAATTACTTGGTGATGACAATGCACCGTTTGATGTTCACCTGATTGGTGGCTTTGATGATGTTTCTACAAAGGTTGTACATTCTGCTGGAAGGAAGCACATCAAACAGGAAGGGTATTCCTATCCACTATGTTGCAGGATACTTGAGGTGTTGTATAAGTCCCGGCAGCAATTCCATCTTCGTACATTTTGTGTCCTTGGGAGCAATACCACAACTGATTCATACGGGAATACACGGCCAATAATCGGTGGATTTGTGGTGGAGACCTCATCTGGGGCTGTTAATCCAGCAAGCTTTGAAATGAATTCAGGGTGTCCAGATGAAATAGTTAGGAGAATTCGTGTGAGCGTTTCTTCTTATGATCCAAATTGGCAAGGAAGGCTACTAGAGACTTATGATACTCACAGTGATGCTTTTGAAATTGCACCTGCCTGCTGGATGCCGGATTGGGCTGAAATGGCATCATCACTTAACCAGCTATCGGACTCTGAGGTCTTGTTGCAGTGCTCCACCTCTCCAGCTGCCGAGCCACCACATTTTGTGGAAAATGAGAGAAGGATA]

[+] EMBL CB645151             [TCCCTTCCGCGACGCGGCGGCGACTCCGGCGACGCGACATCGGCGATGCTCCTCGTCGACGGCGAGCCCGTCTCCGCCTCCGCCTCCCCCACCTTCGGCTCCTCCCGCGGGGGGAGCGGCGGGAGGGAGCTGGTGGCGGCGCTCATGGGGAACCCCGGGCTCCGCGCCGCATCGGAGAGGCTCAGGGCGGAGCCGGAGAGGCGGATCTCGTCGGGGCCAGAGGAGGATGATGCGGACGCCGCGGCGGCGGCGGCGCCGAGGCACGTGTACGTGTTCCAGCGGGAGTTCGCCACGGTTGATCCGGCGCGCGTCGAGTTAGTGGGCACAGATGAGGTGACTACATGCGTGGGTGTAGTAATTCGCAACAACAAGACTGGAATGTAAGTGAAAAAGGAAGTGAGCATTTAAGCTGAACCTGACCTCCATTAGCCACATGGACTTCCCAAAAATTGTGGAGGGAGGGCTCAAACAGATGTTAGAATTACTTGGTGATGACAATGCACCGTTTGATGTTCACCTGATTGGTGGCTTTGATGATGTTTCTACAAAGGTTGTACATTCTGCTGGAAGGAAGCACATCAAACAGGAAGGGTATTCCTATCCACTATGTTGCAGGATACTTGAGGTGTTGTATAAGTCCCGGCAGCAATTCCATCTTCGTACATTTTGTGTCCTTGGGAGCAATACCACAACTGATTCATACGGGAATACACGGCCAATAATCGGTGGATTTGTGGTGGAGACCTCATCTGGGGCTGTTAATCCAGCAAGCTTTGAAATGAATTCAGGGTGTCCAGATGAAATAGTTAGGAGAATTCGTGTGAGCGTTTCTTC                                                                                                                                                                                                             ]
[+] EMBL AU173176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TACTTGAGGTGTTGTATAAGTCCCGGCAGCAATTCCATCTTCGTACATTTTGTGTCCTTGGGAGCAATACCACAACTGATTCATAC GGAATACACGGCCAATAATCGGTGGATTTGTGGTGGAGACCTCATCTGGGGCTGTTAATCCAGCAAGCTTTGAAATGAATTCAAGGTGTCCAGATGAAATAGTTAGGAGAATTCGTGTGAGCGTTTCTTCTTATGATCCAAATTGGCAAGGAAGGCTACTAGAGACTTATGATACTCACAGTGATGCTTTTGAAATTGCACCTGCCTGCTGGATGCCGGATTGGGCTGAAATGGCATCATCACTTAACCAGCTATCGGACTCTGAGGTCTTGTTGCAGTGCTCCACCTCTCCAGCTGCCGAGCCACCACATTTTGTGGAAAATGAGAGAAGGATA]


>consensus_10872#1 TCCCTTCCGCGACGCGGCGGCGACTCCGGCGACGCGACATCGGCGATGCTCCTCGTCGAC GGCGAGCCCGTCTCCGCCTCCGCCTCCCCCACCTTCGGCTCCTCCCGCGGGGGGAGCGGC GGGAGGGAGCTGGTGGCGGCGCTCATGGGGAACCCCGGGCTCCGCGCCGCATCGGAGAGG CTCAGGGCGGAGCCGGAGAGGCGGATCTCGTCGGGGCCAGAGGAGGATGATGCGGACGCC GCGGCGGCGGCGGCGCCGAGGCACGTGTACGTGTTCCAGCGGGAGTTCGCCACGGTTGAT CCGGCGCGCGTCGAGTTAGTGGGCACAGATGAGGTGACTACATGCGTGGGTGTAGTAATT CGCAACAACAAGACTGGAATGTAAGTGAAAAAGGAAGTGAGCATTTAAGCTGAACCTGAC CTCCATTAGCCACATGGACTTCCCAAAAATTGTGGAGGGAGGGCTCAAACAGATGTTAGA ATTACTTGGTGATGACAATGCACCGTTTGATGTTCACCTGATTGGTGGCTTTGATGATGT TTCTACAAAGGTTGTACATTCTGCTGGAAGGAAGCACATCAAACAGGAAGGGTATTCCTA TCCACTATGTTGCAGGATACTTGAGGTGTTGTATAAGTCCCGGCAGCAATTCCATCTTCG TACATTTTGTGTCCTTGGGAGCAATACCACAACTGATTCATACGGGAATACACGGCCAAT AATCGGTGGATTTGTGGTGGAGACCTCATCTGGGGCTGTTAATCCAGCAAGCTTTGAAAT GAATTCAGGGTGTCCAGATGAAATAGTTAGGAGAATTCGTGTGAGCGTTTCTTCTTATGA TCCAAATTGGCAAGGAAGGCTACTAGAGACTTATGATACTCACAGTGATGCTTTTGAAAT TGCACCTGCCTGCTGGATGCCGGATTGGGCTGAAATGGCATCATCACTTAACCAGCTATC GGACTCTGAGGTCTTGTTGCAGTGCTCCACCTCTCCAGCTGCCGAGCCACCACATTTTGT GGAAAATGAGAGAAGGATA



consensusID : consensus_10872#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 769
fasta sequence
                              [GCTTAATCAAATCGATTAAGCAAACCACTTCCCTTCCGCGACGCGGCGGCGACTCCGGCGACGCGACATCGGCGATGCTCCTCGTCGACGGCGAGCCCGTCTCCGCCTCCGCCTCCCCCACCTTCGGCTCCTCCCGCGGGGGGAGCGGCGGGAGGGAGCTGGTGGCGGCGCTCATGGGGAACCCCGGGCTCCGCGCCGCATCGGAGAGGCTCAGGGCGGAGCCGGAGAGGCGGATCTCGTCGGGGCCAGAGGAGGATGATGCGGACGCCGCGGCGGCGGCGGCGCCGAGGCACGTGTACGTGTTCCAGCGGGAGTTCGCCACGGTTGATCCGGCGCGCGTCGAGTTAGTGGGCACAGATGAGGTGACTACATGCGTGGGTGTAGTAATTCGCAACAACAAGACTGGAATGACCTCCATTAGCCACATGGACTTCCCAAAAATTGTGGAGGGAGGGCTCAAACAGATGTTAGAATTACTTGGTGATGACAATGCACCGTTTGATGTTCACCTGATTGGTGGCTTTGATGATGTTTCTACAAAGGTTGTACATTCTGCTGGAAGGAAGCACATCAAACAGGAAGGGTATTCCTATCCACTATGTTGCAGGATACTTGAGGTGTTGTATAAGTCCCGGCAGCAATTCCATCTTCGTACATTTTGTGTCCTTGGGAGCAATACCACAACTGATTCATACGGGAATACACGGCCAATAATCGGTGGATTTGTGGTGGAGACCTCATCTGGGGCTGTTAATCCCAGCAGCTTTGA]

[+] EMBL CB642629             [GCTTAATCAAATCGATTAAGCAAACCACTTCCCTTCCGCGACGCGGCGGCGACTCCGGCGACGCGACATCGGCGATGCTCCTCGTCGACGGCGAGCCCGTCTCCGCCTCCGCCTCCCCCACCTTCGGCTCCTCCCGCGGGGGGAGCGGCGGGAGGGAGCTGGTGGCGGCGCTCATGGGGAACCCCGGGCTCCGCGCCGCATCGGAGAGGCTCAGGGCGGAGCCGGAGAGGCGGATCTCGTCGGGGCCAGAGGAGGATGATGCGGACGCCGCGGCGGCGGCGGCGCCGAGGCACGTGTACGTGTTCCAGCGGGAGTTCGCCACGGTTGATCCGGCGCGCGTCGAGTTAGTGGGCACAGATGAGGTGACTACATGCGTGGGTGTAGTAATTCGCAACAACAAGACTGGAATGACCTCCATTAGCCACATGGACTTCCCAAAAATTGTGGAGGGAGGGCTCAAACAGATGTTAGAATTACTTGGTGATGACAATGCACCGTTTGATGTTCACCTGATTGGTGGCTTTGATGATGTTTCTACAAAGGTTGTACATTCTGCTGGAAGGAAGCACATCAAACAGGAAGGGTATTCCTATCCACTATGTTGCAGGATACTTGAGGTGTTGTATAAGTCCCGGCAGCAATTCCATCTTCGTACATTTTGTGTCCTTGGGAGCAATACCACAACTGATTCATACGGGAATACACGGCCAATAATCGGTGGATTTGTGGTGGAGACCTCATCTGGGGCTGTTAATCCCAGCAGCTTTGA]


>consensus_10872#2 GCTTAATCAAATCGATTAAGCAAACCACTTCCCTTCCGCGACGCGGCGGCGACTCCGGCG ACGCGACATCGGCGATGCTCCTCGTCGACGGCGAGCCCGTCTCCGCCTCCGCCTCCCCCA CCTTCGGCTCCTCCCGCGGGGGGAGCGGCGGGAGGGAGCTGGTGGCGGCGCTCATGGGGA ACCCCGGGCTCCGCGCCGCATCGGAGAGGCTCAGGGCGGAGCCGGAGAGGCGGATCTCGT CGGGGCCAGAGGAGGATGATGCGGACGCCGCGGCGGCGGCGGCGCCGAGGCACGTGTACG TGTTCCAGCGGGAGTTCGCCACGGTTGATCCGGCGCGCGTCGAGTTAGTGGGCACAGATG AGGTGACTACATGCGTGGGTGTAGTAATTCGCAACAACAAGACTGGAATGACCTCCATTA GCCACATGGACTTCCCAAAAATTGTGGAGGGAGGGCTCAAACAGATGTTAGAATTACTTG GTGATGACAATGCACCGTTTGATGTTCACCTGATTGGTGGCTTTGATGATGTTTCTACAA AGGTTGTACATTCTGCTGGAAGGAAGCACATCAAACAGGAAGGGTATTCCTATCCACTAT GTTGCAGGATACTTGAGGTGTTGTATAAGTCCCGGCAGCAATTCCATCTTCGTACATTTT GTGTCCTTGGGAGCAATACCACAACTGATTCATACGGGAATACACGGCCAATAATCGGTG GATTTGTGGTGGAGACCTCATCTGGGGCTGTTAATCCCAGCAGCTTTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10872#1      -------------------------------TCCCTTCCGCGACGCGGCGGCGACTCCGG 29
consensus_10872#2      --GCTTAATCAAATCGATTAAGCAAACCACTTCCCTTCCGCGACGCGGCGGCGACTCCGG 58
consensus_10872#0      CACCTGCCTGCTGGTGTGTATCTTAAAACATTTCCCTTTAATTTACGAAGGAAAG--AGT 58
                                                      * ** *        **  **  *    * 

consensus_10872#1      CGACGCGACATCGGCGATGCTCCTCGTCGACGGCGAGCCCGTCTCCGCCTCCGCCTCCCC 89
consensus_10872#2      CGACGCGACATCGGCGATGCTCCTCGTCGACGGCGAGCCCGTCTCCGCCTCCGCCTCCCC 118
consensus_10872#0      TTATTCCACAACCTCAATTCTTCTGAAAGTCTA-GAAATCAACTCC-CTCAAATTCTTAA 116
                         *  * *** *  * ** ** **    * *   **   *  **** *            

consensus_10872#1      CACCTTCGGCTCCTCCCGCGGGGG---GAGCGGCGGGAGGGAGCTGGTGGCGGCGCTCAT 146
consensus_10872#2      CACCTTCGGCTCCTCCCGCGGGGG---GAGCGGCGGGAGGGAGCTGGTGGCGGCGCTCAT 175
consensus_10872#0      CACCATCA-CTTTACCCGCAGTAGTTTGGGTAACTGAAAATATGTGATCAATTTGTTGTT 175
                       **** **  **   ***** *  *   * *   * * *   *  ** *      * *  *

consensus_10872#1      G----GGGAACCCCGG--GCTCCG--CGCCGCATCGGAGAGGCTCAGGGCGGAGCCGGAG 198
consensus_10872#2      G----GGGAACCCCGG--GCTCCG--CGCCGCATCGGAGAGGCTCAGGGCGGAGCCGGAG 227
consensus_10872#0      ATAATGGGAATTTTGATAGCTCTAATTATTGCTTAAAATAACGGTAATCATGTGTCATAT 235
                            *****    *   ****        ** *   * *     *     * * *  * 

consensus_10872#1      AGGCGGATCTC------GTCGGGGCCAGAGGAGGATGATGCGGACGCCGCGGCGG--CGG 250
consensus_10872#2      AGGCGGATCTC------GTCGGGGCCAGAGGAGGATGATGCGGACGCCGCGGCGG--CGG 279
consensus_10872#0      TTTCTGTTCATTAGCGAATCAAACCCTGTACAGGACTACAAGAAAATTCCTTCCTTTCAG 295
                          * * **         **    ** *   ****  *   * *     *  *    * *

consensus_10872#1      CGGCGCCGAGGCACGTGTACGTGT---TCCAGCGGGAGTTCGCCACGGTTGATCCGGCGC 307
consensus_10872#2      CGGCGCCGAGGCACGTGTACGTGT---TCCAGCGGGAGTTCGCCACGGTTGATCCGGCGC 336
consensus_10872#0      CTGTGTTAAAAAATG-GTACCTCCCAATCATGCAATAGTTTTTTTTTTTAAAGTCCGTCA 354
                       * * *   *   * * **** *     **  **   ****        *  *  * *   

consensus_10872#1      GCGTCGAGTTAGTGGG-CACAGATGAGGTGACTACAT-GCGTGGGTGTAGTAATTCGCA- 364
consensus_10872#2      GCGTCGAGTTAGTGGG-CACAGATGAGGTGACTACAT-GCGTGGGTGTAGTAATTCGCA- 393
consensus_10872#0      ACCATGCAATAGTAACTCAGAAATATTGTGA-TACATCACATGTGCATAGGAACACACAC 413
                        *   *   ****    ** * **   **** *****  * ** *  *** **  * ** 

consensus_10872#1      ----ACAAC----AAGACTGGAATGTAAGTGAAAAAGGAAGTGAGCATTTAA--GCTGAA 414
consensus_10872#2      ----ACAAC----AAGACTGGAATG----------------------------------- 410
consensus_10872#0      TATTACAATTCAAAATACTAGCACATGCATACTTTTCTGGGTAATCACTTAATTGATGAT 473
                           ****     ** *** * *                                     

consensus_10872#1      CCTG--ACCTCCATTAGCCACATGGACTTCCCAAAAATTGTGGAGGGAGGGCTCAAACAG 472
consensus_10872#2      ------ACCTCCATTAGCCACATGGACTTCCCAAAAATTGTGGAGGGAGGGCTCAAACAG 464
consensus_10872#0      CCTATATGCTCTATCGAGATCTTGTTCTGCTCGAATAGGATGCCGGATTGGGCTGAAATG 533
                               *** **      * **  ** * * ** *   **  **   **    **  *

consensus_10872#1      ATGTTAGAA-TTACTTGGTGATGACAATGCACCGTTTGATGTTCACCTGATTGGTGGCTT 531
consensus_10872#2      ATGTTAGAA-TTACTTGGTGATGACAATGCACCGTTTGATGTTCACCTGATTGGTGGCTT 523
consensus_10872#0      GCATCATCACTTAACCAGCTATCGGACTCTGAGGTC--GTGTTGCAGTGCTCCACCTCTC 591
                          * *  * ***    *  **   * *     **    ****    ** *      ** 

consensus_10872#1      TGA-TGATGTTTCTACAAAGGTTGTACATTCTGCTGGAAGGAAGCACATCAAACAGGAAG 590
consensus_10872#2      TGA-TGATGTTTCTACAAAGGTTGTACATTCTGCTGGAAGGAAGCACATCAAACAGGAAG 582
consensus_10872#0      CAGCTGCCGAGCCACCACATTTTGTGGAAAATGAGAGAAGGATATGGAGATACTTGATTG 651
                           **  *   *  ** *  ****  *   **   ******     *   *   *   *

consensus_10872#1      GGTATTCCTATCCACTATG-----TTGCAGGATAC----TTGAGGTGTTGTATAAGTCC- 640
consensus_10872#2      GGTATTCCTATCCACTATG-----TTGCAGGATAC----TTGAGGTGTTGTATAAGTCC- 632
consensus_10872#0      AAAATCCATATTGGCAAGACACATTTCCGAAATACAAGCCTCGGGTCTTCCATAGGACCA 711
                          ** * ***   * *       ** *   ****     *  *** **  *** * ** 

consensus_10872#1      -CGGCAGCAATT--CCATCTTCGTACATTTTGTGTCCTTGGGAGCAATACCACAACTGAT 697
consensus_10872#2      -CGGCAGCAATT--CCATCTTCGTACATTTTGTGTCCTTGGGAGCAATACCACAACTGAT 689
consensus_10872#0      GTGATGGAAGGTGGTCACGTTACTCAATAGTATCATCCAGCTAACATTGGTGCTCTCTCT 771
                         *   * *  *   **  **  *  **  * *   *  *  * ** *    *      *

consensus_10872#1      TCATACGGGA-------ATACACGGCCAATAATCGGTGGATTTGTGGTGGAGACCTCATC 750
consensus_10872#2      TCATACGGGA-------ATACACGGCCAATAATCGGTGGATTTGTGGTGGAGACCTCATC 742
consensus_10872#0      ACATGCGGAACAAGGGGATATATACTTCATATATAATCTCTCCTTTGTTAGAACCTGTGA 831
                        *** *** *       *** *      ***     *   *   * **    ****    

consensus_10872#1      TGGG--GCTGT-TAATCCAGCAAGCTTTGAAATGAATTCAGGGTGTCCAGATGAAATAGT 807
consensus_10872#2      TGGG--GCTGT-TAATCCCAGCAGCTTTGA------------------------------ 769
consensus_10872#0      TAGATTGTGGTGTGGCAACACAGGATTTCTTCTGAACAGCGGGCATCAATCCCAGTCGAT 891
                       * *   *  ** *          * ***                                

consensus_10872#1      TAGGAGAAT---TCGTGTGAGCGTTTCTTCTTATGATCCAAATTGGCAAGGAAGGCTACT 864
consensus_10872#2      ------------------------------------------------------------
consensus_10872#0      TCTAGATTTCTTTCTCCTGTGAGTTGTCCCATGTAATCATCCTTGG-AAGGTGAATGAGG 950
                                                                                   

consensus_10872#1      AGAGACTTATGATACTCACAGTGATGCTTTTGAAATTGCACCTGCCTGCTGGATGCCGGA 924
consensus_10872#2      ------------------------------------------------------------
consensus_10872#0      AATTATTCAGATTTTCCCCGTAGACGCACAGAAGTCTCAAGTTGATGTATTAGCACAGAA 1010
                                                                                   

consensus_10872#1      TTGGGCTGAAATGGCATCATCACTTAACCAGCTAT-CGGACTCTGAGGTCTTGTTGCAGT 983
consensus_10872#2      ------------------------------------------------------------
consensus_10872#0      C----CTGTGTTAGGATTGTTGATTGATAGGCAACATGGATGATGGCATTCCGTTCTCGT 1066
                                                                                   

consensus_10872#1      GCTCCACCTCTCCAGCTGCCGAGCCACCACATTTTGTGGAAAATGAGAGAAGGATA---- 1039
consensus_10872#2      ------------------------------------------------------------
consensus_10872#0      -CTCATATGCTCCGACCATTGTTACTTGGTATTTTCTGAAGGGAACATTTTTCATTTTGG 1125
                                                                                   

consensus_10872#1      ------
consensus_10872#2      ------
consensus_10872#0      CAAAAA 1131
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)