cluster # 10876

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Oryza sativa
cluster # 10876 cluster # 10876 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10876#0 length = 1295 sequences # 8
consensusID : consensus_10876#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1295
fasta sequence
                              [ACACAAACCTAGTTGGGGCAGTCATATTTTGCCATTTGCATTTCTTTCCTGGGTCTTGGGTTTGAAGGCTTGAAGGGTGGCCATGGACAGTTATAAGAACAGAGTGAATTTTGGGAACCAGGAGCCATTGGAAGGAAGCAGATTGTAAAAAAAAAAAAGAAGTTAACTCATATCGGATGCTTCTCCAATGAGGAACACGGATAGGCCAGTGCCACCATATTATCTGCCAATTAGCATGATGCAATTCTTCTCAGTGAAGGTGATCGAGATCATGGGAGGTCTCCAATGGCCACTCCACGTCTATGGTATCGTTGCTACGCGTGACTCACAAGATAACAAGAGGAACTTCTTGTTTCGTTGTGATAGAGAGCACTGCCAGACCCTTGCCTCACCACAGGATTCATGTTTGAGACTTACACGTCCTAGTCGAGCTATTGTAATAGTGAACCCTGTAGTTGTTGAGGTTGACTTGAAAGTGAAGGGCAGCAGAGGACCCCCATCTGAAGACAAGGTTTTAAGCGAGCATGCTTTTGTTCACAACCACACTGGTCATAGGATTAAACCTGGCTTTCCTCATAGACAGCTGGAATCAACAGAGGACAGCACGATGGAGTTTGTGTTTGCACATCTGCAGAGTGCAGTGGAGGCCACCATCACGGTTGGAGTCGTTGAAGGATCGCCTGATTTCAGGGCTCGTTTTACTGCTCGAACTGCTGGGATTGATGAGGATGTGTTGCTTCTTGACTTTCAGGATGGG--CCTAAGGTGGTGGTCGATGATGATGGGTTCGTCGTGCTCCGGCGACGTGTTGTTTCTGTTGAAGGGACA-GGGAAGCTGATTCTCCGGATGGAGGCTACAGATCACGGTGGCGATGACACGGCTGTTGTTAAGGAAGAAATCTTCTGTGCTAGAAAGACATCA-AGGAGCCAAAGTTACTTCATGCTTGGGTTTTGTAAGCTGTCGATCATCATCGCCTGGTCGTTACTTCCATAGATGTAGCGCCAGTTTAAGTCCTTGCGTAATTGTGTGTATTGTGTACTAGTAGTACTGCTTTGACTAAGCCAGATTGGTGTGACTCTGGGTTCTTACTAAAGAGCATCTCCAAAAGAGCAAATCAGGTGAAGAAAAAGATAGGAGTCGATATTCATCTGATACTATCTTGGTAAAGAAAAAGATAGGAATAGGAGACTATGCATTCATTATAGGCAATTAAATGCTAAGAACAAATACTCATTCTTATTATAAAAAGACCTGCTAGATAAACTCCATAGTAATGCCTTTTGGTCTAAAAAAAAAA]

[+] EMBL CB660476             [ACACAAACCTAGTTGGGGCAGTCATATTTTGCCATTTGCATTTCTTTCCTGGGTCTTGGGTTTGAAGGCTTGAAGGGTGGCCATGGACAGTTATAAGAACAGAGTGAATTTTGGGAACCAGGAGCCATTGGAAGGAAGCAGATTGTAAAAAAAAAAAAGAAGTTAACTCATATCGGATGCTTCTCCAATGAGGAACACGGATAGGCCAGTGCCACCATATTATCTGCCAATTAGCATGATGCAATTCTTCTCAGTGAAGGTGATCGAGATCATGGGAGGTCTCCAATGGCCACTCCACGTCTATGGTATCGTTGCTACGCGTGACTCACAAGATAACAAGAGGAACTTCTTGTTTCGTTGTGATAGAGAGCACTGCCAGACCCTTGCCTCACCACAGGATTCATGTTTGAGACTTACACGTCCTAGTCGAGCTATTGTAATAGTGAACCCTGTAGTTGTTGAGGTTGACTTGAAAGTGAAGGGCAGCAGAGGACCCCCATCTGAAGACAAGGTTTTAAGCGAGCATGCTTTTGTTCACAACCACACTGGTCATAGGATTAAACCTGGCTTTCCTCATAGACAGCTGGAATCAACAGAGGACAGCACGATGGAGTTTGTGTTTGCACATCTGCAGAGTGCAGTGGAGGCCACCATCACGGTTGGAGTCGTTGAAGGATCGCCTGATTTCAGGGCTCGTTTTACTGCTCGAACTGCTGGGATTGATGAGGATGTGTTGCTTCTTGACTTTCAGGATGGG  CCTAAGGTGGTGGTCGATGATGATGGGTTCGTCGTGCTCCGGCGACGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI978353             [                                                                                                                                                               AAGTTAACTCATATCGGATGCTTCTCCAATGAGGAACACGGATAGGCCAGTGCCACCATATTATCTGCCAATTAGCATGATGCAATTCTTCTCAGTGAAGGTGATCGAGATCATGGGAGGTCTCCAATGGCCACTCCACGTCTATGGTATCGTTGCTACGCGTGACTCACAAGATAACAAGAGGAACTTCTTGTTTCGTTGTGATAGAGAGCACTGCCAGACCCTTGCCTCACCACAGGATTCATGTTTGAGACTTACACGTCCTAGTCGAGCTATTGTAATAGTGAACCCTGTAGTTGTTGAGGTTGACTTGAAAGTGAAGGGCANNNNNNNACCCCCATCTGAAGACANNNNNTTAAGCGAGCATGCTTTTGNNCACAACCACACTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB634909             [                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTCCTAGTCGAGCTATTGTAATAGTGAACCCTGTAGTTGTTGAGGTTGACTTGAAAGTGAAGGGCAGCAGAGGACCCCCATCTGAAGACAAGGTTTTAAGCGAGCATGCTTTTGTTCACAACCACACTGGTCATAGGATTAAACCTGGCTTTCCTCATAGACAGCTGGAATCAACAGAGGACAGCACGATGGAGTTTGTGTTTGCACATCTGCAGAGTGCAGTGGAGGCCACCATCACGGTTGGAGTCGTTGAAGGATCGCCTGATTTCAGGGCTCGTTTTACTGCTCGAACTGCTGGGATTGATGAGGATGTGTTGCTTCTTGACTTTCAGGATGGG  TCTAAGGTGGTGGTCGATGATGATGGGTTCGTCGTGCTCCGGCGACGTGTTGTTTCTGTTGAAGGGACA GGGAAGCTGATTCTCCGGATGGAGGCTACAGATCACGGTGGCGATGACACGGCTGTTGTTAAGGAAGAAATCTTCTGTGCTAGAAAGACATCA AGGAGCCAAAGTTACTTCATGCTTGGGTTTTGTAAGCTGTCGATCATCATCGCCTGGTCGTTACTTCCATAGATGTAGCGCCAGTTTAAGTCCTTGCGTAATTGTGTGTATTGTGTACTAGTAGTACTGCTTTGACTAAGCCAGATTGGTGTGACTCTGGGTTCTTACTAAAGAGCATCTCCAAAAGAGCAAATCAGGTGA                                                                                                                                                                               ]
[-] EMBL CB639162             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAAACCTGGCTTTCTTCATAGACAGCTGGAATCAACAGAGGACAGCACGATGGAGTTTGTGTTTGCACATCTGCAGAGTGCAGTGGAGGCCACCATCACGGTTGGAGTCGTTGAAGGATCGCCTGATTTCAGGGCTCGTTTTACTGCTCGAACTGCTGGGATTGATGAGGATGTGTTGCTTCTTGACTTTCAGGATGGG  CCTAAGGTGGTGGTCGATGATGATGGGTTCGTCGTGCTCCGGCGACGTGTTGTTTCTGTTGAAGGGACA GGGAAGCTGATTCTCCGGATGGAGGCTACAGATCACGGTGGCGATGACACGGCTGTTGTTAAGGAAGAAATCTTCTGTGCTAAAAAGACATCA AGGAGCCAAAGTTACTTCATGCTTGGGTTTTGTAAGCTGTCGATCATCATCGCCTGGTCGTTACTTCCATAGATGTAGCGCCAGTTTAAGTCCTTGCGTAATTGTGTGTATTGTGTACTAGTAGTACTGCTTTGACTAAGCCAGATTGGTGTGACTCTGGGTTCTTACTAAAGAGCATCTCCAAAAAAACAAA                                                                                                                                                                                       ]
[-] EMBL CB636945             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGGATCGCTTGATTTCAGGGCTCGTTTTACTGCTCGAACTGCTGGGATTGATGAGGATGTGTTGCTTCTTGACTTTCAGGATGGG  CCTAAGGTGGTGGTCGATGATGATGGGTTCGTCGTGCTCCGGCGACGTGTTGTTTCTGTTGAAGGGACA GGGAAGCTGATTCTCCGGATGGAGGCTACAGATCACGGTGGCGATGACACGGCTGTTGTTAAGGAAGAAATCTTCTGTGCTAGAAAGACATCA AGGAGCCAAAGTTACTTCATGCTTGGGTTTTGTAAGCTGTCGATCATCATCGCCTGGTCGTTACTTCCATAGATGTAGCGCCAGTTTAAGTCCTTGCGTAATTGTGTGTATTGTGTACTAGTAGTACTGCTTTGACTAAGCCAGATTGGTGTGACTCTGGGTTCTTACTAAAGAGCATCTCCAAAAGAGCAAATCAGGTGAAGAAAAAGATAGGAGTCGATATTCATCTGATACTATCTTGGTAAAGAAAAAGATAGGAATAGGAGACTATGCATTCATTATAGGCAATTAAATGCTAAGAACAAATACTCATTCTTATTATAAAAAGAC                                              ]
[+] EMBL BM419362             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTTCCGGATGGGNTCTTAAGGTTGTGGTC AT ATAAT GGTTC TCGTGCTCC GCGACGTGTTGTTTCTGTTGAAGGGACA GGGAAGCTGATTCTCCGGATGGAGGCTACAGATCACGGTGGCGATGACACGGCTGTTGTTAAGGAAGAAATCTTCTGTGCTAGAAAGACATCA AGGAGCCCAAGTTACTTCATGCTTGGGTTTTGTAAGCTGTCGATCATCATCGCCTGGTCGTTACTTCCATAGATGTAGCGCCAGTTTAAGTCCTTGCGTAATTGTGTGTATTGTGTACTAGTAGTACTGCTTTGACTAAGCCAGATTGGTGTGACTCTGGGTTCTTACTAAAGAGCATCTCCAAAAGAGCAAATCAGGTGAAGAAAAAGATAGGAGTCGATATTCATCTGATACTATCTTGGTAAAGAAAAAGATAGGAATAGGAGACTATGCATTCATTATAGGCAATT AATGCTAAGAACNAATACTCATTCTTATTATAAAAAGACCTGCTAGATAAACTCCATAGTAATGCCTTTTGGTCTAAAAAAAAAA]
[-] EMBL AI978354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         nAAGGTGGTGGTCGATGATGATGGGTTCGTCGTGCTCNNNNGACGTGTTGTTTCTGTTGAAGGGACA GGGAAGCTGATTCTCCGGATGGAGGCTACAGATCACGGTGGCGATGACACGGCTGTTGTTAAGGAAGAAATCTTCTGTGCTAGAAAGACATCA AGGAGCCAAAGTTACTTCATGCTTGGGTTTTGTAAGCTGTCGATCATCATCGCCTGGTCGTTACTTCCATAGATGTAGCGCCAGTTTAAGTCCTTGCGTAATTGTGTGTATTGTGTACTAGTAGTACTGCTTTGA                                                                                                                                                                                                                                                 ]
[+] EMBL BM419000             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGACACGGGAAGCTGATTCTCCGGATGGAGGCTACNGATCCCGGTGGCGATGACCCGGCTGTTGTTAAGGAAGAAATCTTCTGTGCTAGAAAGACNTCACAGGAGCCCAAGTTACTTCATGCTTGGGTTTTGTAAGCTGTCGATCATCATCGCCTGGTCGTTACTTCCATAGATGTAGCGCCCGTTTAAGTCCTTGCGTAATTGTGTGTATTGTGTACTAGTAGTACTGCTTTGACTAAGCCCGATTGGTGTGACTCTGGGTTCTTACTAAAGAGCATCTCCCAAAGAGCCAATCCGGTGAAGAAAAAGATAGGAGTCGATATTCATCTGATACTATCTTGGTAAAG AAAAGATAGGAATAGGAGACTAT CATTC TTATA GCCATTAAATGCTAAGACCCAATACTCATTCTTATTATAAAAAGACCTGCTAGATAAACTCCATAGTAATCCCTTTTGGTCT          ]




>consensus_10876#0
ACACAAACCTAGTTGGGGCAGTCATATTTTGCCATTTGCATTTCTTTCCTGGGTCTTGGG
TTTGAAGGCTTGAAGGGTGGCCATGGACAGTTATAAGAACAGAGTGAATTTTGGGAACCA
GGAGCCATTGGAAGGAAGCAGATTGTAAAAAAAAAAAAGAAGTTAACTCATATCGGATGC
TTCTCCAATGAGGAACACGGATAGGCCAGTGCCACCATATTATCTGCCAATTAGCATGAT
GCAATTCTTCTCAGTGAAGGTGATCGAGATCATGGGAGGTCTCCAATGGCCACTCCACGT
CTATGGTATCGTTGCTACGCGTGACTCACAAGATAACAAGAGGAACTTCTTGTTTCGTTG
TGATAGAGAGCACTGCCAGACCCTTGCCTCACCACAGGATTCATGTTTGAGACTTACACG
TCCTAGTCGAGCTATTGTAATAGTGAACCCTGTAGTTGTTGAGGTTGACTTGAAAGTGAA
GGGCAGCAGAGGACCCCCATCTGAAGACAAGGTTTTAAGCGAGCATGCTTTTGTTCACAA
CCACACTGGTCATAGGATTAAACCTGGCTTTCCTCATAGACAGCTGGAATCAACAGAGGA
CAGCACGATGGAGTTTGTGTTTGCACATCTGCAGAGTGCAGTGGAGGCCACCATCACGGT
TGGAGTCGTTGAAGGATCGCCTGATTTCAGGGCTCGTTTTACTGCTCGAACTGCTGGGAT
TGATGAGGATGTGTTGCTTCTTGACTTTCAGGATGGGCCTAAGGTGGTGGTCGATGATGA
TGGGTTCGTCGTGCTCCGGCGACGTGTTGTTTCTGTTGAAGGGACAGGGAAGCTGATTCT
CCGGATGGAGGCTACAGATCACGGTGGCGATGACACGGCTGTTGTTAAGGAAGAAATCTT
CTGTGCTAGAAAGACATCAAGGAGCCAAAGTTACTTCATGCTTGGGTTTTGTAAGCTGTC
GATCATCATCGCCTGGTCGTTACTTCCATAGATGTAGCGCCAGTTTAAGTCCTTGCGTAA
TTGTGTGTATTGTGTACTAGTAGTACTGCTTTGACTAAGCCAGATTGGTGTGACTCTGGG
TTCTTACTAAAGAGCATCTCCAAAAGAGCAAATCAGGTGAAGAAAAAGATAGGAGTCGAT
ATTCATCTGATACTATCTTGGTAAAGAAAAAGATAGGAATAGGAGACTATGCATTCATTA
TAGGCAATTAAATGCTAAGAACAAATACTCATTCTTATTATAAAAAGACCTGCTAGATAA
ACTCCATAGTAATGCCTTTTGGTCTAAAAAAAAAA
clustalw multiple alignements is not computed in this case