cluster # 10881

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Oryza sativa
cluster # 10881 cluster # 10881 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10881#0 length = 2556 sequences # 7

consensus_10881#1 length = 362 sequences # 1

consensusID : consensus_10881#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2556
fasta sequence

                              [ACGGCGTCGAAGGTGGAGCAGGAGGACACGGTGCGGCGGTGCAAGGAGCGGCGGCGGCACATGAAGGAGGCGGTGGCGTCGCGGCAGCAGCTGGCGTCGGCGCACGCCGACTACCTCCGCTCCCTCCGCCTCACCGCCGCCGCGCTCTCCCGCTTCGCGCAGGGCCACCCGTCGCTCGCCGTGTCGCACCACACCGCGCCGGTGCTCCTCACCACGGCCGCGCCCGCGCTGGCGCCGACGCCGACGCCGCCGCCGCCGTCATCCACGGCGTCGTCCTCGCTCCCGCCACCGACGCCGCTGCTCCCCAAGCACCAGCAGGCGCCGCCGCCGCCACCGCCCACGCAGTCGCATCAGCCGCCTCCTCCCGTGGCGGTGAGGGCTCCCCGCGGCGGGCCGCGTCGCCTCAAGGTGCCGCACATCCTGTCCGACTCCAGCGTCGCCAGCCCGGCGCGGTCGTCGTTCCGGAAGCCGGTGGTGGGGACGCCGTCGTCGTCGTCGGCGTGGGACTGGGAGAACTTCTACCCGCCGTCGCCGCCGGACTCCGAGTTCTTCGACCGCCGCAAGGCCGACCTCGAGGAGGCCAACCGCCTCCGCGAGCTCGAGGAGGAGGAGAAGGCCCGGGGCTACCTCCACCCCCACCACCTCAAGGAAGAGGACGAGGTCGACGACGACGACGACGAGAGGGAGGAGGAGATGCATTGCGGCGGATGGGAGGACGACGACGACCACTACGCGTCGACGACCACCTCGGAGACCAGATCGGAGGAGGGGGAAATGGGGAACAGATCGGAGTGCGGCTTCGCGGCCAGATCGGAGTACGGCGGCACGGCGCCGTCGGAGTACGCCGCCGCGCCGCTGCCACTGCCGCTGAGGAGGAGGGACGAGAGGTCGGAGGCCGGGGACTCCTCCTCCACGGTCACGGCGGCCGCCGAGATGCGGATGGTGATCCGCCACCGCACGCTGGCGGAGATCGTGGCCGCCATCGAGGAGTACTTTGTCAAGGCGGCCGAGGCCGGCAATGGCGTCTCGGAGCTCCTGGAGGCTAGCCGCGCGCAGCTGGACCGCAACTTCCGGCAGCTCAAAAAGACGGTGTACCACTCGAACAGCTTGCTATCGTCGCTGTCGTCGACATGGACTTCAAAGCCACCATTGGCTGTTCGCTACAAGTTGGACACCAATGCGTTAGAGATGGAGTCAATGGAAGGGAAGAGCCATGGGTCGACACTGGAGCGTCTTTTGGCCTGGGAGAAAAAGCTCTATCAGGAGGTCAAGGCTAGAGAGAGCGTTAAGATTGAGCACGAGAAGAAGCTTTCTACTCTGCAGAGCCTGGAGTACAGAGGGAGGGATAGTACCAAGCTGGATAAGACCAAGGCCTCCATAAACAAGCTGCAATCGTTGATCATCGTGACTTCACA-GGCCGCAACTACCACATCCTCAGCCATTGTCAGGGTGCGTGACAATGAGCTTGCACCACAGCTTGTCGAGCTTTGC-TTCGCGCTGTTGAGCATG-TGGAGATCAATGAACCATTTCCATGAGATCCAGAATGAAATTGTTCAGCAAGTCCGTGGTCTGGTAGACAATTCCATGGCTGAGTCAACATCTGATCTTC-ACCGGCTTGCCACCCGTGATCTTGAGGCTGCTGTCTCAGCATGGCACTCAAACTTCAACCGTCTCATCAAGTATCAACGTGATTATATACGTGCCCTCTATGGCTGGCTGAAGCTCACACTCTTCCAAGTGGACAGTAATATCCCACAAGAGGCTTACACCTCGCTGATCTCTCGTGAACTCACCACCTTCTGTGATGAGTGGAAGCAAGCACTGGACCGGCTTCCAGATGCTTCGGCTTCGGAGGCTATCAAGAGCTTCGTGAATGTTGTCCATGTCATCTACACTAAGCAGGCAGAGGAGATGAAAATAAAAAAGCGGACAGAGACATATTCAAAGGAGCTGGAAAAGAAGACCAACTCACTTCGAGCCATTGAGAAGAAGTACTACCAATCCTATTCAATGGTTGGCCTTGGCCTTCCTGGCAGTGGGCGCGATGGCATTGAAAGCCATTCGTTCGATGCCCGCGATCCTCTTGCAGAGAAGAAAACCGAGATTGCCCAATGTCGGCGGAAGGTGGAGGACGAAATGACAAGGCATGCTAAGGCAGTGGAGGTAACTAGATCAATGACA-CTGAACAACATCCAAACAGGCCTGCCAGGAATGTTCCAAGCCATAGCTGGTTTCTCAGGAACAGTTGTTGAAGCCCTTGACGTTGTCTGCAGGC-GAGCTGGATC-GGT-GCGGTAGAAGCTTGCGCTGCCAGACTTTCCAAGAAACCGTTCGTTAAGTCTTTTTGGGTGGTTCAGTAATTTATATAGGGAAAATGCAATATATATAGCTAAAATTAGTGATGAGAATATGGGGGAGAAGGCTCCCTTGATGTTTTGCCTTGTTGGGAGTTGGTCATTTTGGTTGTAGATAAATGATTTTACTCAGGATTGTTGATGTTCTTTTGCTTGTCCTGTGAAGTG-CAAGGGAAGATTACATTGTACAAAAAAAAAAAAAAAA]

[+] EMBL AF268596             [ACGGCGTCGAAGGTGGAGCAGGAGGACACGGTGCGGCGGTGCAAGGAGCGGCGGCGGCACATGAAGGAGGCGGTGGCGTCGCGGCAGCAGCTGGCGTCGGCGCACGCCGACTACCTCCGCTCCCTCCGCCTCACCGCCGCCGCGCTCTCCCGCTTCGCGCAGGGCCACCCGTCGCTCGCCGTGTCGCACCACACCGCGCCGGTGCTCCTCACCACGGCCGCGCCCGCGCTGGCGCCGACGCCGACGCCGCCGCCGCCGTCATCCACGGCGTCGTCCTCGCTCCCGCCACCGACGCCGCTGCTCCCCAAGCACCAGCAGGCGCCGCCGCCGCCACCGCCCACGCAGTCGCATCAGCCGCCTCCTCCCGTGGCGGTGAGGGCTCCCCGCGGCGGGCCGCGTCGCCTCAAGGTGCCGCACATCCTGTCCGACTCCAGCGTCGCCAGCCCGGCGCGGTCGTCGTTCCGGAAGCCGGTGGTGGGGACGCCGTCGTCGTCGTCGGCGTGGGACTGGGAGAACTTCTACCCGCCGTCGCCGCCGGACTCCGAGTTCTTCGACCGCCGCAAGGCCGACCTCGAGGAGGCCAACCGCCTCCGCGAGCTCGAGGAGGAGGAGAAGGCCCGGGGCTACCTCCACCCCCACCACCTCAAGGAAGAGGACGAGGTCGACGACGACGACGACGAGAGGGAGGAGGAGATGCATTGCGGCGGATGGGAGGACGACGACGACCACTACGCGTCGACGACCACCTCGGAGACCAGATCGGAGGAGGGGGAAATGGGGAACAGATCGGAGTGCGGCTTCGCGGCCAGATCGGAGTACGGCGGCACGGCGCCGTCGGAGTACGCCGCCGCGCCGCTGCCACTGCCGCTGAGGAGGAGGGACGAGAGGTCGGAGGCCGGGGACTCCTCCTCCACGGTCACGGCGGCCGCCGAGATGCGGATGGTGATCCGCCACCGCACGCTGGCGGAGATCGTGGCCGCCATCGAGGAGTACTTTGTCAAGGCGGCCGAGGCCGGCAATGGCGTCTCGGAGCTCCTGGAGGCTAGCCGCGCGCAGCTGGACCGCAACTTCCGGCAGCTCAAAAAGACGGTGTACCACTCGAACAGCTTGCTATCGTCGCTGTCGTCGACATGGACTTCAAAGCCACCATTGGCTGTTCGCTACAAGTTGGACACCAATGCGTTAGAGATGGAGTCAATGGAAGGGAAGAGCCATGGGTCGACACTGGAGCGTCTTTTGGCCTGGGAGAAAAAGCTCTATCAGGAGGTCAAGGCTAGAGAGAGCGTTAAGATTGAGCACGAGAAGAAGCTTTCTACTCTGCAGAGCCTGGAGTACAGAGGGAGGGATAGTACCAAGCTGGATAAGACCAAGGCCTCCATAAACAAGCTGCAATCGTTGATCATCGTGACTTCACA GGCCGCAACTACCACATCCTCAGCCATTGTCAGGGTGCGTGACAATGAGCTTGCACCACAGCTTGTCGAGCTTTGC TTCGCGCTGTTGAGCATG TGGAGATCAATGAACCATTTCCATGAGATCCAGAATGAAATTGTTCAGCAAGTCCGTGGTCTGGTAGACAATTCCATGGCTGAGTCAACATCTGATCTTC ACCGGCTTGCCACCCGTGATCTTGAGGCTGCTGTCTCAGCATGGCACTCAAACTTCAACCGTCTCATCAAGTATCAACGTGATTATATACGTGCCCTCTATGGCTGGCTGAAGCTCACACTCTTCCAAGTGGACAGTAATATCCCACAAGAGGCTTACACCTCGCTGATCTCTCGTGAACTCACCACCTTCTGTGATGAGTGGAAGCAAGCACTGGACCGGCTTCCAGATGCTTCGGCTTCGGAGGCTATCAAGAGCTTCGTGAATGTTGTCCATGTCATCTACACTAAGCAGGCAGAGGAGATGAAAATAAAAAAGCGGACAGAGACATATTCAAAGGAGCTGGAAAAGAAGACCAACTCACTTCGAGCCATTGAGAAGAAGTACTACCAATCCTATTCAATGGTTGGCCTTGGCCTTCCTGGCAGTGGGCGCGATGGCATTGAAAGCCATTCGTTCGATGCCCGCGATCCTCTTGCAGAGAAGAAAACCGAGATTGCCCAATGTCGGCGGAAGGTGGAGGACGAAATGACAAGGCATGCTAAGGCAGTGGAGGTAACTAGATCAATGACA CTGAACAACATCCAAACAGGCCTGCCAGGAATGTTCCAAGCCATAGCTGGTTTCTCAGGAACAGTTGTTGAAGCCCTTGACGTTGTCTGCAGGC GAGCTGGATC GGT GCGGTAGAAGCTTGCGCTGCCAGACTTTCCAAGAAACCGTTCGTTAAGTCTTTTTGGGTGGTTCAGTAATTTATATAGGGAAAATGCAATATATATAGCTAAAATTAGTGATGAGAATATGGGGGAGAAGGCTCCCTTGATGTTTTGCCTTGTTGGGAGTTGGTCATTTTGGTTGTAGATAAATGATTTTACTCAGGATTGTTGATGTTCTTTTGCTTGTCCTGTGAAGTG CAAGGGAAGATTACATTGTACAAAAAAAAAAAAAAAA]
[+] EMBL CB652151             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGACCACTACGCGTCGACGACCACCTCGGAGACCAGATCGGAGGAGGGGGAAATGGGGAACAGATCGGAGTGCGGCTTCGCGGCCAGATCGGAGTACGGCGGCACGGCGCCGTCGGAGTACGCCGCCGCGCCGCTGCCACTGCCGCTGAGGAGGAGGGACGAGAGGTCGGAGGCCGGGGACTCCTCCTCCACGGTCACGGCGGCCGCCGAGATGCGGATGGTGATCCGCCACCGCACGCTGGCGGAGATCGTGGCCGCCATCGAGGAGTACTTTGTCAAGGCGGCCGAGGCCGGCAATGGCGTCTCGGAGCTCCTGGAGGCTAGCCGCGCGCAGCTGGACCGCAACTTCCGGCAGCTCAAAAAGACGGTGTACCACTCGAACAGCTTGCTATCGTCGCTGTCGTCGACATGGACTTCAAAGCCACCATTGGCTGTTCGCTACAAGTTGGACACCAATGCGTTAGAGATGGAGTCAATGGAAGGGAAGAGCCATGGGTCGACACTGGAGCGTCTTTTGGCCTGGGAGAAAAAGCTCTATCAGGAGGTCAAGGCTAGAGAGAGCGTTAAGATTGAGCACGAGAAGAAGCTTTCTACTCTGCAGAGCCTGGAGTACAGAGGGAGGGATAGTACCAAGCTGGATAAGACCAAGGCCTCCATAAACAAGCTGCAATCGTTGATCATCGTGACTTCACA GGCCGCAACTACCACATCCTCAGCCATTGTCAGGGTGCGTGACAATGAGCTTGCACCACAGCTTGTCGAGCTTTGC TTCGCGCTGTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU070567             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GATGGTGATCCGCCACCGCACGCTGGCGGAGATCGTGGCCGCCATCGAGGAGTACTTTGTCAAGGCGGCCGAGGCCGGCAATGGCGTCTCGGAGCTCCTGGAGGCTAGCCGCGCGCA CTGGACCGCAACTTCCGGCAGCTCAAAAAGACGGTGTACCACTCGAACAGCTTGCTATCGTCGCTGTCGTCGACATGGACTTCAAAGCCACCATTGGCTGTTCGCTACAAGTTGGACACCAATGCGTTAGAGATGGAGTCAATGGAAGGGAAGAGCCATGGGTCGACACTGGAGCGTCTTTTGGCCTGGGAGAAAAAGCTCTATCAGGAGGTCAAGGCTAGAGAGAGCGTTAAGATTGAGCACGAGAAGAAGCTTTCTACTCTGCAGAGCCTGGAGTACAGAGGGAGGGATAGTACCAAGCTGGATAAGACCAAGGCCTCCATAAACAAGCTGCAATCGTTGATCATCGTGACTTCACAGGGCCGCAACTACCACATCCTCAGCCATTGTCAGGGTGCGTGACAATGAGCTTGCACCACAGCTTGTCGAGCTTTGCTTTCGCGCTGTTGAGCATGTTGGAGATCAATGAACCATTTCCATGAGATCCAGAATGAAATTGTTCAGCAAGTCCGTGGTCTGGTAGACAATTCCATGGCTGAGTCAACATCTGATCTTCAACCGGCTTGCCAACCGTGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AI978310             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACAGAGACATATTCAAAGGAGCTGGAAAAGAAGACCAACTCACTTCGAGCCATTGAGAAGAAGTACTACCAATCCTATTCAATGGTTGGCCTTGGCCTTCCTGGCAGTGGGCGCGATGGCATTGAAAGCCATTCGTTCGATGCCCGTGATCCTCTTGCAGAGAAGAAAACCGAGATTNNNCAATGTCGGCGGAAGNNGGAGGACGAAATGACAAGGCATGCTAAGGCAGTGGAGGTAACTAGATCAATGACA CTGAACAACATCCAAACAGGCn                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BI798886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTCTCCCAGAGAAGAAACCCGAGATTGCCCAATGTCGCCGGAAGTTGGAGGACGAAATGACAA GCATGCTAAGCCAGTGGAGGTAACTAGATCAATGACA CTGAACAACATCCAAACAGGCCTGCCAGGAATGTTCCAAGCCATAGCTGGTTTCTCAGGAACAGTTGTTGAAGCCCTTGACGTTGTCT CAGGCAGAGCTGGATCAGGTCGCGGTAGAAGCTTGCGCTGCCAGACTTTCCAAGAAACCGTTCGTTAAGTCTTTTTGGGTGGTTCAGTAATTTATATAGGGAAAATGCAATATATATAGCTAAAATTAGTGATGAGAATATGGGGGAGAAGGCTCCCTTGATGTTTT CCTTGTTGGGAGTTGGTCATTTTGGTTGTAGATAAGTGATTTTACTCAGGATTGTTGATGTTCTTTTGCTTGTCCTGTGAAGTGCCAAGGGAAGATTACCTTGTAAAAAAAAAA        ]
[+] EMBL BI798992             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGAGGACGAAATGACAA GCATGCTAA GCAGTGGAGGTAACTAGATCAATGACACCTGAACAACATCCAAACAGGCCTGCCAGGAATGTTCCAAGCCATAGCTGGTTTCTCAGGAACAGTTGTTGAAGCCCTTGACGTTGTCTCCAGGC GAGCTGGATC GGT  CGGTAGAAGCTTGCGCTGCCAGACTTTCCCAGAAACCGTTCGTTAAGTCTTTTTGGGTGGTTCAGTAATTTATATAGGGAAAAT CAATATATATAGCTAAAATTAGTGATGAGAATATGGGGGAGAAGGCTCCCTTGATGTTTTCCCTTGTTGGGATTTGGTCATTTTGGTTGTAGATAAGTGATTTTACTCAGGATTGTTGATGTTCTTTTGCTTGTCCTGTGAAGTC CAAGGGAAGATTAC TTGTAAAAAAAAAA        ]
[+] EMBL AU086061             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cctTGCCAGGATTNTTCCAACCCATAGCTGGTTTCTCAGGAACANTTGTTGAACCCCTTGACGTTGTCTGCAGGC GAGCTGGATC GGT GCGGTAGAA CTTGCGCTGCCAGACTTTCCAAGAAACCGTTCGTTAAGTCTTTTTGGGTGGTTCAGTAATTTATATAGGGAAAATGCAATATATATAGTTAAAATTAGTGATGAGAATATGGGGGAGAAGGCTCCCTTGATGTTTTGCCTTGTTGGGAGTTGGTCATTTTGGTTGTAGATAAATGATTTTACTCAGGATTGTTGATGTTCTTTTGCTTGTCCTGTGAAGTG CAAGGGAAGATTACATTGTACAAAAAAAAAAAAAAAA]




>consensus_10881#0
ACGGCGTCGAAGGTGGAGCAGGAGGACACGGTGCGGCGGTGCAAGGAGCGGCGGCGGCAC
ATGAAGGAGGCGGTGGCGTCGCGGCAGCAGCTGGCGTCGGCGCACGCCGACTACCTCCGC
TCCCTCCGCCTCACCGCCGCCGCGCTCTCCCGCTTCGCGCAGGGCCACCCGTCGCTCGCC
GTGTCGCACCACACCGCGCCGGTGCTCCTCACCACGGCCGCGCCCGCGCTGGCGCCGACG
CCGACGCCGCCGCCGCCGTCATCCACGGCGTCGTCCTCGCTCCCGCCACCGACGCCGCTG
CTCCCCAAGCACCAGCAGGCGCCGCCGCCGCCACCGCCCACGCAGTCGCATCAGCCGCCT
CCTCCCGTGGCGGTGAGGGCTCCCCGCGGCGGGCCGCGTCGCCTCAAGGTGCCGCACATC
CTGTCCGACTCCAGCGTCGCCAGCCCGGCGCGGTCGTCGTTCCGGAAGCCGGTGGTGGGG
ACGCCGTCGTCGTCGTCGGCGTGGGACTGGGAGAACTTCTACCCGCCGTCGCCGCCGGAC
TCCGAGTTCTTCGACCGCCGCAAGGCCGACCTCGAGGAGGCCAACCGCCTCCGCGAGCTC
GAGGAGGAGGAGAAGGCCCGGGGCTACCTCCACCCCCACCACCTCAAGGAAGAGGACGAG
GTCGACGACGACGACGACGAGAGGGAGGAGGAGATGCATTGCGGCGGATGGGAGGACGAC
GACGACCACTACGCGTCGACGACCACCTCGGAGACCAGATCGGAGGAGGGGGAAATGGGG
AACAGATCGGAGTGCGGCTTCGCGGCCAGATCGGAGTACGGCGGCACGGCGCCGTCGGAG
TACGCCGCCGCGCCGCTGCCACTGCCGCTGAGGAGGAGGGACGAGAGGTCGGAGGCCGGG
GACTCCTCCTCCACGGTCACGGCGGCCGCCGAGATGCGGATGGTGATCCGCCACCGCACG
CTGGCGGAGATCGTGGCCGCCATCGAGGAGTACTTTGTCAAGGCGGCCGAGGCCGGCAAT
GGCGTCTCGGAGCTCCTGGAGGCTAGCCGCGCGCAGCTGGACCGCAACTTCCGGCAGCTC
AAAAAGACGGTGTACCACTCGAACAGCTTGCTATCGTCGCTGTCGTCGACATGGACTTCA
AAGCCACCATTGGCTGTTCGCTACAAGTTGGACACCAATGCGTTAGAGATGGAGTCAATG
GAAGGGAAGAGCCATGGGTCGACACTGGAGCGTCTTTTGGCCTGGGAGAAAAAGCTCTAT
CAGGAGGTCAAGGCTAGAGAGAGCGTTAAGATTGAGCACGAGAAGAAGCTTTCTACTCTG
CAGAGCCTGGAGTACAGAGGGAGGGATAGTACCAAGCTGGATAAGACCAAGGCCTCCATA
AACAAGCTGCAATCGTTGATCATCGTGACTTCACAGGCCGCAACTACCACATCCTCAGCC
ATTGTCAGGGTGCGTGACAATGAGCTTGCACCACAGCTTGTCGAGCTTTGCTTCGCGCTG
TTGAGCATGTGGAGATCAATGAACCATTTCCATGAGATCCAGAATGAAATTGTTCAGCAA
GTCCGTGGTCTGGTAGACAATTCCATGGCTGAGTCAACATCTGATCTTCACCGGCTTGCC
ACCCGTGATCTTGAGGCTGCTGTCTCAGCATGGCACTCAAACTTCAACCGTCTCATCAAG
TATCAACGTGATTATATACGTGCCCTCTATGGCTGGCTGAAGCTCACACTCTTCCAAGTG
GACAGTAATATCCCACAAGAGGCTTACACCTCGCTGATCTCTCGTGAACTCACCACCTTC
TGTGATGAGTGGAAGCAAGCACTGGACCGGCTTCCAGATGCTTCGGCTTCGGAGGCTATC
AAGAGCTTCGTGAATGTTGTCCATGTCATCTACACTAAGCAGGCAGAGGAGATGAAAATA
AAAAAGCGGACAGAGACATATTCAAAGGAGCTGGAAAAGAAGACCAACTCACTTCGAGCC
ATTGAGAAGAAGTACTACCAATCCTATTCAATGGTTGGCCTTGGCCTTCCTGGCAGTGGG
CGCGATGGCATTGAAAGCCATTCGTTCGATGCCCGCGATCCTCTTGCAGAGAAGAAAACC
GAGATTGCCCAATGTCGGCGGAAGGTGGAGGACGAAATGACAAGGCATGCTAAGGCAGTG
GAGGTAACTAGATCAATGACACTGAACAACATCCAAACAGGCCTGCCAGGAATGTTCCAA
GCCATAGCTGGTTTCTCAGGAACAGTTGTTGAAGCCCTTGACGTTGTCTGCAGGCGAGCT
GGATCGGTGCGGTAGAAGCTTGCGCTGCCAGACTTTCCAAGAAACCGTTCGTTAAGTCTT
TTTGGGTGGTTCAGTAATTTATATAGGGAAAATGCAATATATATAGCTAAAATTAGTGAT
GAGAATATGGGGGAGAAGGCTCCCTTGATGTTTTGCCTTGTTGGGAGTTGGTCATTTTGG
TTGTAGATAAATGATTTTACTCAGGATTGTTGATGTTCTTTTGCTTGTCCTGTGAAGTGC
AAGGGAAGATTACATTGTACAAAAAAAAAAAAAAAA

consensusID : consensus_10881#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 362
fasta sequence

                              [ATGGTGATCCTGCACCGCACGCTGGCGGAGATCTGTGGCCGCATCGAGGAGTACTTTGTCAGGCGTGCGATGCCGGCACATGGCTGTCTCGGAGCTCCTGGAGGCTCACCGCGCGCAGCTGGACCGCAACTTCCTGGCAGCTCAAAAAGACGGTGTACCACTCGCAACAGCTTGCTATCAGTCGCTGTCGTCGACATGGACTTCAAAGCCACCATTGGCTGTTCGCTCACAAGTTGGCCCACCCAATGCGTTCGCACATGGAGTCCCATGGCAAGGGCAAGCAGCCAATGGTGTCGCCCACTGGCAGCTGTCTATTTGGCCTGGTGAGCAAAACAGCTCTATCCAGGCAGGCCCCAGGCATC]

[+] EMBL CB965938             [ATGGTGATCCTGCACCGCACGCTGGCGGAGATCTGTGGCCGCATCGAGGAGTACTTTGTCAGGCGTGCGATGCCGGCACATGGCTGTCTCGGAGCTCCTGGAGGCTCACCGCGCGCAGCTGGACCGCAACTTCCTGGCAGCTCAAAAAGACGGTGTACCACTCGCAACAGCTTGCTATCAGTCGCTGTCGTCGACATGGACTTCAAAGCCACCATTGGCTGTTCGCTCACAAGTTGGCCCACCCAATGCGTTCGCACATGGAGTCCCATGGCAAGGGCAAGCAGCCAATGGTGTCGCCCACTGGCAGCTGTCTATTTGGCCTGGTGAGCAAAACAGCTCTATCCAGGCAGGCCCCAGGCATC]




>consensus_10881#1
ATGGTGATCCTGCACCGCACGCTGGCGGAGATCTGTGGCCGCATCGAGGAGTACTTTGTC
AGGCGTGCGATGCCGGCACATGGCTGTCTCGGAGCTCCTGGAGGCTCACCGCGCGCAGCT
GGACCGCAACTTCCTGGCAGCTCAAAAAGACGGTGTACCACTCGCAACAGCTTGCTATCA
GTCGCTGTCGTCGACATGGACTTCAAAGCCACCATTGGCTGTTCGCTCACAAGTTGGCCC
ACCCAATGCGTTCGCACATGGAGTCCCATGGCAAGGGCAAGCAGCCAATGGTGTCGCCCA
CTGGCAGCTGTCTATTTGGCCTGGTGAGCAAAACAGCTCTATCCAGGCAGGCCCCAGGCA
TC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10881#0      ACGGCGTCGAAGGTGGAGCAGGAGGACACGGTGCGGCGGTGCAAGGAGCGGCGGCGGCAC 60
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      ATGAAGGAGGCGGTGGCGTCGCGGCAGCAGCTGGCGTCGGCGCACGCCGACTACCTCCGC 120
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TCCCTCCGCCTCACCGCCGCCGCGCTCTCCCGCTTCGCGCAGGGCCACCCGTCGCTCGCC 180
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      GTGTCGCACCACACCGCGCCGGTGCTCCTCACCACGGCCGCGCCCGCGCTGGCGCCGACG 240
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      CCGACGCCGCCGCCGCCGTCATCCACGGCGTCGTCCTCGCTCCCGCCACCGACGCCGCTG 300
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      CTCCCCAAGCACCAGCAGGCGCCGCCGCCGCCACCGCCCACGCAGTCGCATCAGCCGCCT 360
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      CCTCCCGTGGCGGTGAGGGCTCCCCGCGGCGGGCCGCGTCGCCTCAAGGTGCCGCACATC 420
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      CTGTCCGACTCCAGCGTCGCCAGCCCGGCGCGGTCGTCGTTCCGGAAGCCGGTGGTGGGG 480
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      ACGCCGTCGTCGTCGTCGGCGTGGGACTGGGAGAACTTCTACCCGCCGTCGCCGCCGGAC 540
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TCCGAGTTCTTCGACCGCCGCAAGGCCGACCTCGAGGAGGCCAACCGCCTCCGCGAGCTC 600
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      GAGGAGGAGGAGAAGGCCCGGGGCTACCTCCACCCCCACCACCTCAAGGAAGAGGACGAG 660
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      GTCGACGACGACGACGACGAGAGGGAGGAGGAGATGCATTGCGGCGGATGGGAGGACGAC 720
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      GACGACCACTACGCGTCGACGACCACCTCGGAGACCAGATCGGAGGAGGGGGAAATGGGG 780
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      AACAGATCGGAGTGCGGCTTCGCGGCCAGATCGGAGTACGGCGGCACGGCGCCGTCGGAG 840
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TACGCCGCCGCGCCGCTGCCACTGCCGCTGAGGAGGAGGGACGAGAGGTCGGAGGCCGGG 900
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      GACTCCTCCTCCACGGTCACGGCGGCCGCCGAGATGCGGATGGTGATCCGCCACCGCACG 960
consensus_10881#1      ---------------------------------------ATGGTGATCCTGCACCGCACG 21
                                                              **********  *********

consensus_10881#0      CTGGCGGAGATC-GTGGCCGCCATCGAGGAGTACTTTGTCAAGGCGGCCGAGGCCGGCA- 1018
consensus_10881#1      CTGGCGGAGATCTGTGGCCGC-ATCGAGGAGTACTTTGTCA-GGCGTGCGATGCCGGCAC 79
                       ************ ******** ******************* ****  *** ******* 

consensus_10881#0      ATGGC-GTCTCGGAGCTCCTGGAGGCTAGCCGCGCGCAGCTGGACCGCAACTTCC-GGCA 1076
consensus_10881#1      ATGGCTGTCTCGGAGCTCCTGGAGGCTCACCGCGCGCAGCTGGACCGCAACTTCCTGGCA 139
                       ***** *********************  ************************** ****

consensus_10881#0      GCTCAAAAAGACGGTGTACCACTCG-AACAGCTTGCTATC-GTCGCTGTCGTCGACATGG 1134
consensus_10881#1      GCTCAAAAAGACGGTGTACCACTCGCAACAGCTTGCTATCAGTCGCTGTCGTCGACATGG 199
                       ************************* ************** *******************

consensus_10881#0      ACTTCAAAGCCACCATTGGCTGTTCGCT-ACAAGTTGGACA--CCAATGCGTTAG-AGAT 1190
consensus_10881#1      ACTTCAAAGCCACCATTGGCTGTTCGCTCACAAGTTGGCCCACCCAATGCGTTCGCACAT 259
                       **************************** ********* *   ********** * * **

consensus_10881#0      GGAGTCA-ATGGAAGGGAAGAGCC----ATGG-GTCGAC-ACTGG-AGC-GTCT-TTTGG 1240
consensus_10881#1      GGAGTCCCATGGCAAGGGCAAGCAGCCAATGGTGTCGCCCACTGGCAGCTGTCTATTTGG 319
                       ******  **** * **   ***     **** **** * ***** *** **** *****

consensus_10881#0      CCTGG---GAGAAAAAGCTCTATCAGGAGGTCAAGGCTAGAGAGAGCGTTAAGATTGAGC 1297
consensus_10881#1      CCTGGTGAGCAAAACAGCTCTATCCAGGC----AGGCCCCAGGCATC------------- 362
                       *****   *  *** *********  *      ****   **  * *             

consensus_10881#0      ACGAGAAGAAGCTTTCTACTCTGCAGAGCCTGGAGTACAGAGGGAGGGATAGTACCAAGC 1357
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TGGATAAGACCAAGGCCTCCATAAACAAGCTGCAATCGTTGATCATCGTGACTTCACAGG 1417
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      CCGCAACTACCACATCCTCAGCCATTGTCAGGGTGCGTGACAATGAGCTTGCACCACAGC 1477
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TTGTCGAGCTTTGCTTCGCGCTGTTGAGCATGTGGAGATCAATGAACCATTTCCATGAGA 1537
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TCCAGAATGAAATTGTTCAGCAAGTCCGTGGTCTGGTAGACAATTCCATGGCTGAGTCAA 1597
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      CATCTGATCTTCACCGGCTTGCCACCCGTGATCTTGAGGCTGCTGTCTCAGCATGGCACT 1657
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      CAAACTTCAACCGTCTCATCAAGTATCAACGTGATTATATACGTGCCCTCTATGGCTGGC 1717
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TGAAGCTCACACTCTTCCAAGTGGACAGTAATATCCCACAAGAGGCTTACACCTCGCTGA 1777
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TCTCTCGTGAACTCACCACCTTCTGTGATGAGTGGAAGCAAGCACTGGACCGGCTTCCAG 1837
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      ATGCTTCGGCTTCGGAGGCTATCAAGAGCTTCGTGAATGTTGTCCATGTCATCTACACTA 1897
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      AGCAGGCAGAGGAGATGAAAATAAAAAAGCGGACAGAGACATATTCAAAGGAGCTGGAAA 1957
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      AGAAGACCAACTCACTTCGAGCCATTGAGAAGAAGTACTACCAATCCTATTCAATGGTTG 2017
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      GCCTTGGCCTTCCTGGCAGTGGGCGCGATGGCATTGAAAGCCATTCGTTCGATGCCCGCG 2077
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      ATCCTCTTGCAGAGAAGAAAACCGAGATTGCCCAATGTCGGCGGAAGGTGGAGGACGAAA 2137
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TGACAAGGCATGCTAAGGCAGTGGAGGTAACTAGATCAATGACACTGAACAACATCCAAA 2197
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      CAGGCCTGCCAGGAATGTTCCAAGCCATAGCTGGTTTCTCAGGAACAGTTGTTGAAGCCC 2257
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TTGACGTTGTCTGCAGGCGAGCTGGATCGGTGCGGTAGAAGCTTGCGCTGCCAGACTTTC 2317
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      CAAGAAACCGTTCGTTAAGTCTTTTTGGGTGGTTCAGTAATTTATATAGGGAAAATGCAA 2377
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TATATATAGCTAAAATTAGTGATGAGAATATGGGGGAGAAGGCTCCCTTGATGTTTTGCC 2437
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TTGTTGGGAGTTGGTCATTTTGGTTGTAGATAAATGATTTTACTCAGGATTGTTGATGTT 2497
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      CTTTTGCTTGTCCTGTGAAGTGCAAGGGAAGATTACATTGTACAAAAAAAAAAAAAAAA 2556
consensus_10881#1      -----------------------------------------------------------