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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10884#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2032 fasta sequence
[GAAACACTCCGCAGACTGACACGCTTGCATGGGGGCGGCGGTGGGGAAGGCGGCTCCGGCGAAGGCCCGGCTCGACATTGCCGAGAACACCATATTCCAGCGGAACCGCGGCATATGGGACGCGGCGGCCGCCTGCACCAACGAACGCCTCCTCGACGCGGTCGACGAGATCCTCGACCTGGCGGAGGCCCAGCCTTTCCCCGCGGCGTCCGCGGCCGCCGCCCGCCCTCGACAGCGCCCTCCGCGCCGCCATGTCGCTCATGATGGACGGGTTCATGTGCCTCAGGGTCTGGAACGCCTCCTCCCATGACCTGCGCCTCGCCGTCGACAGGCTCGCGGTCGGTGCTTCCGCCAACGCCCTGTGGCAGCACACCTTCCCCAGCACCGGCGACAGGAGCAGCTCGGCGGGCACCGTGGGGCGCGCGTCGGCCGGAAGCCCGTCGAGTGCCCCTGGCGACTTGGTCGGCTTCTTGGACGGCGAGTTCTTGGATGAGCTCCAGCTGCTCTGCCCCGCGAGCCTGCTCGTCCTCCATGAGATCGCGCACCGGGTAATCCGTGCCGGCTACACGAAGGAGCTCGTCCAGAAATTCACAAATTCGCCATGCGATGTTCTGGACAGGTACGACTATTTTCTTGCAGTTTAACCTACTATGTTTTTTTTTAATCTGAACCGTGACTTCTTTGGTTCTAAAGAAACGTTTTGTTTTTACTGTAATCGTGGAACAGGTTCTTGTCGATTTTTCAGGGGGAATGCTCGCGGCGGACGACAGTGGATCTGATCAAGCGATGGAGCCTGGCGACTCATCTCGTCGGGAAGGCCCTCGTCGTCATGCAGCGGCAGCTGTACACGCACAACTCCCCCGGCGCCTTTGATGCTCTCAAGGACGAGTACTTCTTGGCCATCACAAAGAATCGAATCTTGAACCTGCTCAAGTTCGCAGACGATTTCACCAGCATCACGTCGCACGAGAAGCTCATTTACATCCTTGGCATGTACCAGGCTCTGAGCGAGGCCGCTTCAGGCCTCCTGCTCATGTTCACCGGGCCGCACAAGGAGCTCGTTGCCGAGAGGTCCGAGGAAATCCTCGCCAAATTGGCTATGTCGATAAGGTCCATGGTCGCCAGCCTCATAGCGAAGGTACGAGACGGTGTCTCGAACACGAAGAACATCGTCGGCGTCGGCGTCCATCCGCTGACGAAATACGCCGTGCTCTGCATCGTGCGGCTGGCGCCGCACCGCGACACGCTCGACCTGATCCTCGCGAGCGGCGGGGACGACGTAGCGTCGCTGTCCGATCTCGCGTCGCGCGTGGTAGGGTCCCTGGAAGAGAAGCCCGTGCTTCCCTGCGATGACGACGCGACGGCGGCGGCGACCGGTTCGCGGCACCACCTCTTCCACGCCAACAACGCCAACTTCGTGCTGCAAAGCTGCAAGCCTCTGCTCGGGGACGAGTGGGCGGCGGCGCGCGAGAGCATCGTGGAGCGGCACGTCGCGGGCTACGCCGAGGCTTGCTGGGCACCGGTCGTGGCTTGCTTGGAACCCGCGGGCAGGAAGCCGGCGGCAAAAGTCGTGGCCAAGTTCAGCGCCGCGTTTGACAGAGCGTATGAGAGTCAGGCGCGCTGCGAGGTCCGCGATCCCGCGCTCCGCGACGCGTTGCGAAGGGCCGTGTCCGACAAGGTCGTGACTGCTTACGGCGTGTACCTGAAGACGCACCCCAAGCTCGAGAAAAAACTCAGGTACACCGCCGGGGAGCTGGGCGAGCGGCTTTCGGAATTGTTCGAAGGAGAAGCTGCAGAGCACAACAAATGAAGGCCGATTTCAACTTTTTTTTTTCAAACTTTTAAATTTTTCGTCGCATCGAACTTTCCTACACACACGAACTTCCAATTTTTCAGTTACATTGTTCCAATTTCTTCAAATTTCCAATTTTAGTGTGGAACTAAACACAGCCAAACAACAGACTATAGTTGTTTACCATGGATTCTTTTGTAATAACACATGTAATTTTAGAAAATAAAGAAGAGTAAGGAA]
[+] EMBL AK067779 [GAAACACTCCGCAGACTGACACGCTTGCATGGGGGCGGCGGTGGGGAAGGCGGCTCCGGCGAAGGCCCGGCTCGACATTGCCGAGAACACCATATTCCAGCGGAACCGCGGCATATGGGACGCGGCGGCCGCCTGCACCAACGAACGCCTCCTCGACGCGGTCGACGAGATCCTCGACCTGGCGGAGGCCCAGCCTTTCCCCGCGGCGTCCGCGGCCGCCGCCCGCCCTCGACAGCGCCCTCCGCGCCGCCATGTCGCTCATGATGGACGGGTTCATGTGCCTCAGGGTCTGGAACGCCTCCTCCCATGACCTGCGCCTCGCCGTCGACAGGCTCGCGGTCGGTGCTTCCGCCAACGCCCTGTGGCAGCACACCTTCCCCAGCACCGGCGACAGGAGCAGCTCGGCGGGCACCGTGGGGCGCGCGTCGGCCGGAAGCCCGTCGAGTGCCCCTGGCGACTTGGTCGGCTTCTTGGACGGCGAGTTCTTGGATGAGCTCCAGCTGCTCTGCCCCGCGAGCCTGCTCGTCCTCCATGAGATCGCGCACCGGGTAATCCGTGCCGGCTACACGAAGGAGCTCGTCCAGAAATTCACAAATTCGCCATGCGATGTTCTGGACAGGTACGACTATTTTCTTGCAGTTTAACCTACTATGTTTTTTTTTAATCTGAACCGTGACTTCTTTGGTTCTAAAGAAACGTTTTGTTTTTACTGTAATCGTGGAACAGGTTCTTGTCGATTTTTCAGGGGGAATGCTCGCGGCGGACGACAGTGGATCTGATCAAGCGATGGAGCCTGGCGACTCATCTCGTCGGGAAGGCCCTCGTCGTCATGCAGCGGCAGCTGTACACGCACAACTCCCCCGGCGCCTTTGATGCTCTCAAGGACGAGTACTTCTTGGCCATCACAAAGAATCGAATCTTGAACCTGCTCAAGTTCGCAGACGATTTCACCAGCATCACGTCGCACGAGAAGCTCATTTACATCCTTGGCATGTACCAGGCTCTGAGCGAGGCCGCTTCAGGCCTCCTGCTCATGTTCACCGGGCCGCACAAGGAGCTCGTTGCCGAGAGGTCCGAGGAAATCCTCGCCAAATTGGCTATGTCGATAAGGTCCATGGTCGCCAGCCTCATAGCGAAGGTACGAGACGGTGTCTCGAACACGAAGAACATCGTCGGCGTCGGCGTCCATCCGCTGACGAAATACGCCGTGCTCTGCATCGTGCGGCTGGCGCCGCACCGCGACACGCTCGACCTGATCCTCGCGAGCGGCGGGGACGACGTAGCGTCGCTGTCCGATCTCGCGTCGCGCGTGGTAGGGTCCCTGGAAGAGAAGCCCGTGCTTCCCTGCGATGACGACGCGACGGCGGCGGCGACCGGTTCGCGGCACCACCTCTTCCACGCCAACAACGCCAACTTCGTGCTGCAAAGCTGCAAGCCTCTGCTCGGGGACGAGTGGGCGGCGGCGCGCGAGAGCATCGTGGAGCGGCACGTCGCGGGCTACGCCGAGGCTTGCTGGGCACCGGTCGTGGCTTGCTTGGAACCCGCGGGCAGGAAGCCGGCGGCAAAAGTCGTGGCCAAGTTCAGCGCCGCGTTTGACAGAGCGTATGAGAGTCAGGCGCGCTGCGAGGTCCGCGATCCCGCGCTCCGCGACGCGTTGCGAAGGGCCGTGTCCGACAAGGTCGTGACTGCTTACGGCGTGTACCTGAAGACGCACCCCAAGCTCGAGAAAAAACTCAGGTACACCGCCGGGGAGCTGGGCGAGCGGCTTTCGGAATTGTTCGAAGGAGAAGCTGCAGAGCACAACAAATGAAGGCCGATTTCAACTTTTTTTTTTCAAACTTTTAAATTTTTCGTCGCATCGAACTTTCCTACACACACGAACTTCCAATTTTTCAGTTACATTGTTCCAATTTCTTCAAATTTCCAATTTTAGTGTGGAACTAAACACAGCCAAACAACAGACTATAGTTGTTTACCATGGATTCTTTTGTAATAACACATGTAATTTTAGAAAATAAAGAAGAGTAAGGAA]
[-] EMBL CB626348 [ TCGCTGTCCGATCTCGCGTCGCGCGTGGTAGGGTCCCTGGAAGAGAAGCCCGTGCTTCCCTGCGATGACGACGCGACGGCGGCGGCGACCGGTTCGCGGCACCACCTCTTCCACGCCAACAACGCCAACTTCGTGCTGCAAAGCTGCAAGCCTCTGCTCGGGGACGAGTGGGCGGCGGCGCGCGAGAGCGTCGTGGAGCGGCACGTCGCGGGCTACGCCGAGGCTTGCTGGGCACCGGTCGTGGCTTGCTTGGAACCCGCGGGCAGGAAGCCGGCGGCAAAAGTCGTGGCCAAGTTCAGCGCCGCGTTTGACAGAGCGTATGAGAGTCAGGCGCGCTGCGAGGTCCGCGATCCCGCGCTCCGCGACGCGTTGCGAAGGGCCGTGTCCGACAAGGTCGTGACTGCTTACGGCGTGTACCTGAAGACGCACCCCAAGCTCGAGAAAAAACTCAGGTACACCGCCGGGGAGCTGGGCGAGCGGCTTTCGGAATTGTTCGAAGGAGAAGCTGCAGAGCACAACAAATGAAGGCCGATTTCAAC TTTTTTTTTCAAACTTTTAAATTTTTCGTCGCATCGAACTTTCCTACACACACG AATTTTTCAGTTACATTGTTCCAATTTCTTCAAACTTCCAATTTTAGTGTGGAACTAAACACAGCCAAACAACAGACTTTAGTTGTTTACCACGGATTCTTTTGTAATAACACATGT TTTTAAGGAAATAAAGAAGAGTAAG ]
consensusID : consensus_10884#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1779 fasta sequence
[AAACACTCCGCAGACTGACACGCTTGCATGGGGGCGGCGGTGGGGAAGGCGGCTCCGGCGAAGGCCCGGCTCGACATTGCCGAGAACACCATATTCCAGCGGAACCGCGGCATATGGGACGCGGCGGCCGCCTGCACCAACGAACGCCTCCTCGACGCGGTCGACGAGATCCTCGACCTGGCGGAGGCCCAGCCTTTCCCCGCGGCGTCCGCGGCCGCCGCCCGCCTCGACAGCGCCCTCCGCGCCGCCATGTCGCTCATGATGGACGAGTTCATGTGCCTCAGGGTCTGGAACGCCTCCTCCCATGACCTGCGCCTCGCCGTCGACAGGCTCGCGGTCGGTGCTTCCGCCAACGCCCTGTGGCAGCACACCTTCCCCAGCACCGGCGACAGGAGCAGCTCGGCGAGCACCGTGGGGCGCGCGTCGGCCGGAAGCCCGTCGAGTGCCCCTGGCGACTTGGTCGGCTTCTTGGACGGCGAGTTCTTGGATGAGCTCCAGCTGCTCTGCCCCGCGAGCCTGCTCGTCCTCCATGAGATCGCGCACCGGGTAATCCGTGCCGGCTACACGAAGGAGCTCGTCCAGAAATTCACAAATTCCCCATGCGATGTTCTGGACAGGTTCTTGTCGATTTTTCAGGGGGAATGCTCGCGGCGGACGACAGTGGATCTGATCAAGCGATGGAGCCTGGCGACTCATCTCGTCGGGAAGGCCCTCGTCGTCATGCAGCGGCAGCTGTACACGCACAACTCCCCCGGCGCCTTTGATGCTCTCAAGGACGAGTACTTCTTGGCCATCACAAAGAATCGAATCTTGAACCTGCTCAAGTTCGCAGACGATTTCACCAGCATCACGTCGCACGAGAAGCTCATTTACATCCTTGGCATGTACCAGGCTCTGAGCGAGGCCGCTTCAGGCCTCCTGCTCATGTTCACCGGGCCGCACAAGGAGCTCGTTGCCGAGAGGTCCGAGGAAATCCTCGCCAAATTGGCTATGTCGATAAGGTCCATGGTCGCCAGCCTCATAGCGAAGGTACGAGACGGTGTCTCGAACACGAAGAACATCGTCGGCGTCGGCGTCCATCCGCTGACGAAATACGCCGTGCTCTGCATCGTGCGGCCGGCGCCGCACCGCGACACGCTCGACCTGATCCTCGCGAGCGGCGGGGACGACGTAGCGTCGCTGTCCGATCTCGCGTCGCGCGTGGTAGGGTCCCTGGAAGAGAAGCCCGTGCTTCCCTGCGATGACGACGCGACGGCGGCGGCGACCGGTTCGCGGCACCACCTCTTCCACGCCAACAACGCCAACTTCGTGCTGCAAAGCTGCAAGCCTCTGCTCGGGGACGAGTGGGCGGCGGCGCGCGAGAGCATCGTGGAGCGGCACGTCGCGGGCTACGCCGAGGCTTGCTGGGCACCGGTCGTGGCTTGCTTGGAACCCGCGGGCAGGAAGCCGGCGGCAAAAGTCGTGGCCAAGTTCAGCGCCGCGTTTGACAGAGCGTATGAGAGTCAGGCGCGCTGCGAGGTCCGCGATCCCGCGCTCCGCGACGCGTTGCGAAGGGCCGTGTCCGACAAGGTCGTGACTGCTTACGGCGTGTACCTGAAGACGCACCCCAAGCTCGAGAAAAAACTCAGGTACACCGCCGGGGAGCTGGGCGAGCGGCTTTCGGAATTGTTCGAAGGAGAAGCTGCAGAGCACAACAAATGAAGGCCGATTTCAACTTTTTTTTTTCAAACTTTTAAATTTTTCGTCGCATCGAACTTTCCTACACACACGAACTTCCAA]
[+] EMBL AK060538 [AAACACTCCGCAGACTGACACGCTTGCATGGGGGCGGCGGTGGGGAAGGCGGCTCCGGCGAAGGCCCGGCTCGACATTGCCGAGAACACCATATTCCAGCGGAACCGCGGCATATGGGACGCGGCGGCCGCCTGCACCAACGAACGCCTCCTCGACGCGGTCGACGAGATCCTCGACCTGGCGGAGGCCCAGCCTTTCCCCGCGGCGTCCGCGGCCGCCGCCCGCCTCGACAGCGCCCTCCGCGCCGCCATGTCGCTCATGATGGACGAGTTCATGTGCCTCAGGGTCTGGAACGCCTCCTCCCATGACCTGCGCCTCGCCGTCGACAGGCTCGCGGTCGGTGCTTCCGCCAACGCCCTGTGGCAGCACACCTTCCCCAGCACCGGCGACAGGAGCAGCTCGGCGAGCACCGTGGGGCGCGCGTCGGCCGGAAGCCCGTCGAGTGCCCCTGGCGACTTGGTCGGCTTCTTGGACGGCGAGTTCTTGGATGAGCTCCAGCTGCTCTGCCCCGCGAGCCTGCTCGTCCTCCATGAGATCGCGCACCGGGTAATCCGTGCCGGCTACACGAAGGAGCTCGTCCAGAAATTCACAAATTCCCCATGCGATGTTCTGGACAGGTTCTTGTCGATTTTTCAGGGGGAATGCTCGCGGCGGACGACAGTGGATCTGATCAAGCGATGGAGCCTGGCGACTCATCTCGTCGGGAAGGCCCTCGTCGTCATGCAGCGGCAGCTGTACACGCACAACTCCCCCGGCGCCTTTGATGCTCTCAAGGACGAGTACTTCTTGGCCATCACAAAGAATCGAATCTTGAACCTGCTCAAGTTCGCAGACGATTTCACCAGCATCACGTCGCACGAGAAGCTCATTTACATCCTTGGCATGTACCAGGCTCTGAGCGAGGCCGCTTCAGGCCTCCTGCTCATGTTCACCGGGCCGCACAAGGAGCTCGTTGCCGAGAGGTCCGAGGAAATCCTCGCCAAATTGGCTATGTCGATAAGGTCCATGGTCGCCAGCCTCATAGCGAAGGTACGAGACGGTGTCTCGAACACGAAGAACATCGTCGGCGTCGGCGTCCATCCGCTGACGAAATACGCCGTGCTCTGCATCGTGCGGCCGGCGCCGCACCGCGACACGCTCGACCTGATCCTCGCGAGCGGCGGGGACGACGTAGCGTCGCTGTCCGATCTCGCGTCGCGCGTGGTAGGGTCCCTGGAAGAGAAGCCCGTGCTTCCCTGCGATGACGACGCGACGGCGGCGGCGACCGGTTCGCGGCACCACCTCTTCCACGCCAACAACGCCAACTTCGTGCTGCAAAGCTGCAAGCCTCTGCTCGGGGACGAGTGGGCGGCGGCGCGCGAGAGCATCGTGGAGCGGCACGTCGCGGGCTACGCCGAGGCTTGCTGGGCACCGGTCGTGGCTTGCTTGGAACCCGCGGGCAGGAAGCCGGCGGCAAAAGTCGTGGCCAAGTTCAGCGCCGCGTTTGACAGAGCGTATGAGAGTCAGGCGCGCTGCGAGGTCCGCGATCCCGCGCTCCGCGACGCGTTGCGAAGGGCCGTGTCCGACAAGGTCGTGACTGCTTACGGCGTGTACCTGAAGACGCACCCCAAGCTCGAGAAAAAACTCAGGTACACCGCCGGGGAGCTGGGCGAGCGGCTTTCGGAATTGTTCGAAGGAGAAGCTGCAGAGCACAACAAATGAAGGCCGATTTCAACTTTTTTTTTTCAAACTTTTAAATTTTTCGTCGCATCGAACTTTCCTACACACACGAACTTCCAA]
[+] EMBL CB626347 [ GGGCGGCGGTGGGGAAGGCGGCTCCGGCGAAGGCCCGGCTCGACATTGCCGAGAACACCATATTCCAGCGGAACCGCGGCATATGGGACGCGGCGGCCGCCTGCACCAACGAACGCCTCCTCGACGCGGTCGACGAGATCCTCGACCTGGCGGAGGCCCAGCCTTTCCCCGCGGCGTCCGCGGCCGCCGCCCGCCTCGACAGCGCCCTCCGCGCCGCCATGTCGCTCATGATGGACGAGTTCATGTGCCTCAGGGTCTGGAACGCCTCCTCCCATGACCTGCGCCTCGCCGTCGACAGGCTCGCGGTCGGTGCTTCCGCCAACGCCCTGTGGCAGCACACCTTCCCCAGCACCGGCGACAGGAGCAGCTCGGCGAGCACCGTGGGGCGCGCGTCGGCCGGAAGCCCGTCGAGTGCCCCTGGCGACTTGGTCGGCTTCTTGGACGGCGAGTTCTTGGATGAGCTCCAGCTGCTCTGCCCCGCGAGCCTGCTCGTCGTCCATGAGATCGCGCACCGGGTAATCCGTGCCGGCTACACGAAGGAGCTCGTCCAGAAATTCACAAATTCCCCATGCGATGTTCTGGACAGGTTCTTGTCGATTTTTCAGGGGGAATGCTCGCGGCGGACGACAGTGGATCTGATCAAGCGATGGAGCCTGGCGACTCATCTCGTCGGGAAGGCCCTCGTCGTCATGCAGCGGCAGCTGTACACGCACAACTCCCCCGGCGCCTTTGATGCTCTCAAGGACGAGTACTTCTTGGCCATCACAAAGAATCGAATCTTGAACCTGCTCAAGTTCGCAGACGATTTCACCAGCA ]
consensusID : consensus_10884#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1238 fasta sequence
[GGAAAAAATCCAATTTGACTCCCTTAAATATACGTCGAATCTTATTCATATCCTTAAACCACAAAACCAAATATGATGACTTCTTAAACTATTAAAACCGTCTAAAACGACTCCCTCGGCTGTTTTAAGAGTGGTTTTCGCTGACGTGGTGTACATGTGGCCGCCTAGTCATCAAATAAATTAAAAAAAGTTAAGCTGGCCCACATGTCATCCCCTCCCTTTAATAACCTCTCTCTCTCCCTCCTTTCTTCTTCTCGGCCCCTTCCGCCTCGGCACTGGCGACGGCGGCGTCCGGCGGCAAGTGTACGGTGTCGAGGGCCCGACAGCGAGGGCGTCGCTTGCGGCTGCTGGGCCCGACGACGAGGGCGTTGACTGCACAGTGAGATCGACGAGATCCTCGACCTAGCGGAGGCCCAGCCTTTCCCCACGGCGTTTCTGGCCGCTGCCCGCCTCGACAGTGCCCTCCGTGTCGCCATGTCGCGCATGACCTGCACCTCGCCGTCGACAAGCTCACGGTCGGTGCTTCCGCCAACGCCCTGTGGACACGCCTTAGATTGTCTCCAACAGAGAAGGCAAAACGCAAAACAGCCTCCAACAGACAAAGCAAACAGAGGAGGCATTTTGCATATGAGGAGAGAGGGAACGCAAAATTGCCGTCTCTCTCCAAGACGCAATCGTCCACACGATGTGGCGGTGAGCTCGAAGATTCGCATCGGGGCGCGGCGGCCAGCGGACGATGACATCGAGGCGAGCCCGCGGCCGGCGTTTCCAGGCATGTCTACGACGGGGCGAGGAGGCCGACGACGAATCCTTGTCGGGGCGCGGCGGCGCAGCGTGGTGAGCCCGCGGGCGGTGCTTGCACGACGGATCCACGTCGGCGAGGCAGCAAGGTATCCACGTCAGCGAGGTGGCGAGGCGAGGAGGATCTGTGTTGACGCGGCAACGAGGCGAGGCGAATCCGCGTCGGTGCGAGGCGCGGCGGATGCCCGTCGAGTGCCCCTGGCGATTTGGTCGGCTTCTTGGACGGCGACTTCTTGGAAGACCTCCGCTGCTCCACAGCGTCGAAGTCCCGCGGGAAGAACTCGATGGAGCCGAGGCGGCGGCGGTAGAGCAGCCAGGCCGCCGCCGCTCCCTACCGCCGTCCCCACCACCGTCCACCGCTCCCGACCGCCGCCGCCGCCGCTCCCCACCACCGCTCCGAGCAAGGTGAAAAAAGAGACCCGGGAGGGAGAAAGAGA]
[+] EMBL CB657167 [GGAAAAAATCCAATTTGACTCCCTTAAATATACCTCGAATCTTATTCATATCCTTAAACCACAAAACCAAATATGATGACTTCTTAAACTATTAAAACCGTCTAAAACGACTCCCTCGGCTGTTTTAAGAGTGGTTTTCGCTGACGTGGTGTACATGTGGCCGCCTAGTCATCAAATAAATTAAAAAAAGTTAAGCTGGCCCACATGTCATCCCCTCCCTTTAATAACCTCTCTCTCTCCCTCCTTTCTTCTTCTCGGCCCCTTCCGCCTCGGCACTGGCGACGGCGGCGTCCGGCGGCAAGTGTACGGTGTCGAGGGCCCGACAGCGAGGGCGTCGCTTGCGGCTGCTGGGCCCGACGACGAGGGCGTTGACTGCACAGTGAGATCGACGAGATCCTCGACCTAGCGGAGGCCCAGCCTTTCCCCACGGCGTTTCTGGCCGCTGCCCGCCTCGACAGTGCCCTCCGTGTCGCCATGTCGCGCATGACCTGCACCTCGCCGTCGACAAGCTCACGGTCGGTGCTTCCGCCAACGCCCTGTGGACACGCCTTAGATTGTCTCCAACAGAGAAGGCAAAACGCAAAACAGCCTCCAACAGACAAAGCAAACAGAGGAGGCATTTTGCATATGAGGAGAGAGGGAACGCAAAATTGCCGTCTCTCTCCAAGACGCAATCGTCCACACGATGTGGCGGTGAGCTCGAAGATTCGCATCGGGGCGCGGCGGCCAGCGGACGATGACATCGAGGCGAGCCCGCGGCCGGCGTTTCCA ]
[+] EMBL CB662951 [ AAATATACGTCGAATCTTATTCATATCCTTAAACCACAAAACCAAATATGATGACTTCTTAAACTATTAAAACCGTCTAAAACGACTCCCTCGGCTGTTTTAAGAGTGGTTTTCGCTGACGTGGTGTACATGTGGCCGCCTAGTCATCAAATAAATTAAAAAAAGTTAAGCTGGCCCACATGTCATCCCCTCCCTTTAATAACCTCTCTCTCTCCCTCCTTTCTTCTTCTCGGCCCCTTCCGCCTCGGCACTGGCGACGGCGGCGTCCGGCGGCAAGTGTACGGTGTCGAGGGCCCGACAGCGAGGGCGTCGCTTGCGGCTGCTGGGCCCGACGACGAGGGCGTTGACTGCACAGTGAGATCGACGAGATCCTCGACCTAGCGGAGGCCCAGCCTTTCCCCACGGCGTTTCTGGCCGCTGCCCGCCTCGACAGTGCCCTCCGTGTCGCCATGTCGCGCATGACCTGCACCTCGCCGTCGACAAGCTCACGGTCGGTGCTTCCGCCAACGCCCTGTGGACACGCCTTAGATTGTCTCCAACAGAGAAGGCAAAACGCAAAACAGCCTCCAACAGACAAAGCAAACAGAGGAGGCATTTTGCATATGAGGAGAGAGGGAACGCAAAATTGCCGTCTCTCTCCAAGACGCAATCGTCCACACGATGTGGCGGTGAGCTCGAAGATTCGCATCGGGGCGCGGCGGCCAGCGGACGATGACATCGAGGCGAGCCCGCGGCCGGCGTTTCCA ]
[+] EMBL CB663066 [ AAATATACGTCGAATCTTATTCATATCCTTAAACCACAAAACCAAATATGATGACTTCTTAAACTATTAAAACCGTCTAAAACGACTCCCTCGGCTGTTTTAAGAGTGGTTTTCGCTGACGTGGTGTACATGTGGCCGCCTAGTCATCAAATAAATTAAAAAAAGTTAAGCTGGCCCACATGTCATCCCCTCCCTTTAATAACCTCTCTCTCTCCCTCCTTTCTTCTTCTCGGCCCCTTCCGCCTCGGCACTGGCGACGGCGGCGTCCGGCGGCAAGTGTACGGTGTCGAGGGCCCGACAGCGAGGGCGTCGCTTGCGGCTGCTGGGCCCGACGACGAGGGCGTTGACTGCACAGTGAGATCGACGAGATCCTCGACCTAGCGGAGGCCCAGCCTTTCCCCACGGCGTTTCTGGCCGCTGCCCGCCTCGACAGTGCCCTCCGTGTCGCCATGTCGCGCATGACCTGCACCTCGCCGTCGACAAGCTCACGGTCGGTGCTTCCGCCAACGCCCTGTGGACACGCCTTAGATTGTCTCCAACAGAGAAGGCAAAACGCAAAACAGCCTCCAACAGACAAAGCAAACAGAGGAGGCATTTTGCATATGAGGAGAGAGGGAACGCAAAATTGCCGTCTCTCTCCAAGACGCAATCGTCCACACGATGTGGCGGTGAGCTCGAAGATTCGCATCGGGGCGCGGCGGCCAGCGGACGATGACATCGAGGCGAGCCCGCGGCCGGCGTTTCCA ]
[-] EMBL AK068046 [ AATATACGTCGAATCTTATTCATATCCTTAAACCACAAAACCAAATATGATGACTTCTTAAACTATTAAAACCGTCTAAAACGACTCCCTCGGCTGTTTTAAGAGTGGTTTTCGCTGACGTGGTGTACATGTGGCCGCCTAGTCATCAAATAAATTAAAAAAAGTTAAGCTGGCCCACATGTCATCCCCTCCCTTTAATAACCTCTCTCTCTCCCTCCTTTCTTCTTCTCGGCCCCTTCCGCCTCGGCACTGGCGACGGCGGCGTCCGGCGGCAAGTGTACGGTGTCGAGGGCCCGACAGCGAGGGCGTCGCTTGCGGCTGCTGGGCCCGACGACGAGGGCGTTGACTGCACAGTGAGATCGACGAGATCCTCGACCTAGCGGAGGCCCAGCCTTTCCCCACGGCGTTTCTGGCCGCTGCCCGCCTCGACAGTGCCCTCCGTGTCGCCATGTCGCGCATGACCTGCACCTCGCCGTCGACAAGCTCACGGTCGGTGCTTCCGCCAACGCCCTGTGGACACGCCTTAGATTGTCTCCAACAGAGAAGGCAAAACGCAAAACAGCCTCCAACAGACAAAGCAAACAGAGGAGGCATTTTGCATATGAGGAGAGAGGGAACGCAAAATTGCCGTCTCTCTCCAAGACGCAATCGTCCACACGATGTGGCGGTGAGCTCGAAGATTCGCATCGGGGCGCGGCGGCCAGCGGACGATGACATCGAGGCGAGCCCGCGGCCGGCGTTTCCAGGCATGTCTACGACGGGGCGAGGAGGCCGACGACGAATCCTTGTCGGGGCGCGGCGGCGCAGCGTGGTGAGCCCGCGGGCGGTGCTTGCACGACGGATCCACGTCGGCGAGGCAGCAAGGTATCCACGTCAGCGAGGTGGCGAGGCGAGGAGGATCTGTGTTGACGCGGCAACGAGGCGAGGCGAATCCGCGTCGGTGCGAGGCGCGGCGGATGCCCGTCGAGTGCCCCTGGCGATTTGGTCGGCTTCTTGGACGGCGACTTCTTGGAAGACCTCCGCTGCTCCACAGCGTCGAAGTCCCGCGGGAAGAACTCGATGGAGCCGAGGCGGCGGCGGTAGAGCAGCCAGGCCGCCGCCGCTCCCTACCGCCGTCCCCACCACCGTCCACCGCTCCCGACCGCCGCCGCCGCCGCTCCCCACCACCGCTCCGAGCAAGGTGAAAAAAGAGACCCGGGAGGGAGAAAGAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10884#0 GAAACACTCCGCAGACTGACACGCTTGCATGGGGGCGGCGGTGGGGAAGGCGGCTCCGGC 60
consensus_10884#1 -AAACACTCCGCAGACTGACACGCTTGCATGGGGGCGGCGGTGGGGAAGGCGGCTCCGGC 59
consensus_10884#2 --------------------------------------------GGAAA--AAATCCAAT 14
**** ***
consensus_10884#0 GAAGGCCCGGCTCGACATTGCCGAGAACACCATAT-TCCAGCGGAACCGCGGCATATGGG 119
consensus_10884#1 GAAGGCCCGGCTCGACATTGCCGAGAACACCATAT-TCCAGCGGAACCGCGGCATATGGG 118
consensus_10884#2 TTGACTCC--CTTAAATATACGTCGAATCTTATTCATATCCTTAAACCACA--AAACCAA 70
** ** * * * *** ** * **** * * *
consensus_10884#0 ACGCGGCGGCCGCCTGCACCAACGAACGCCTCCTCGACGCGGTCGACGAGATCCTCGACC 179
consensus_10884#1 ACGCGGCGGCCGCCTGCACCAACGAACGCCTCCTCGACGCGGTCGACGAGATCCTCGACC 178
consensus_10884#2 ATATGATGACTTCTTAAACTATTAAA-ACCGTCTAAA--------ACGACTCCCTCGGC- 120
* * * * * * ** * ** ** ** * **** ***** *
consensus_10884#0 TGGCGGAGGCCCAGCCTTTCCCCGCGGCGTCCGCG-GCCGCCGCCCGCCCTCGACAGCGC 238
consensus_10884#1 TGGCGGAGGCCCAGCCTTTCCCCGCGGCGTCCGCG-GCCGCCGCCCGCC-TCGACAGCGC 236
consensus_10884#2 TGTTTTAAGAGTGGTTTTCGCTGACGTGGTGTACATGTGGCCGCCTAGTCATCA-AATAA 179
** * * * ** * ** ** * * ****** * *
consensus_10884#0 CCTCCGCGCCGCCATGTCGCTCATGATGGACGGGTTCATGTGCCTCAGGGTCTGGAACGC 298
consensus_10884#1 CCTCCGCGCCGCCATGTCGCTCATGATGGACGAGTTCATGTGCCTCAGGGTCTGGAACGC 296
consensus_10884#2 ATTAAAAAAAGTTAAGCTGGCCCACATG--TCATCCCCTCCCTTTAATAACCTCTCTCTC 237
* * * * * * *** * * * * ** * *
consensus_10884#0 CTCCTCCCATGACCTGCGCCTCGCCGTCGACAGGCTCGCGGTCGGTGCTTCCGCCAACGC 358
consensus_10884#1 CTCCTCCCATGACCTGCGCCTCGCCGTCGACAGGCTCGCGGTCGGTGCTTCCGCCAACGC 356
consensus_10884#2 TCCCTCCTTT---CTTCTTCTCGGCCCCTTCCGCCTCGGCACTGGCG---ACGGCGGCGT 291
***** * ** * **** * * * * **** ** * ** * **
consensus_10884#0 CCTGTGGCA-GCACACCTTCCCCAGCACCGGCGACAGGAGCAGCTCGGCGGGCACCGTGG 417
consensus_10884#1 CCTGTGGCA-GCACACCTTCCCCAGCACCGGCGACAGGAGCAGCTCGGCGAGCACCGTGG 415
consensus_10884#2 CCGGCGGCAAGTGTACGGTGTCGAGGGCC--CGACAGCGAGGGCGTCGCTTGCGGC-TGC 348
** * **** * ** * * ** ** ****** ** ** ** * **
consensus_10884#0 GGCGCGCGTCGGCCGGAAGCCCGTCGAGTGCCCCTGGCGACTTGGTCGGCTTCTTGGACG 477
consensus_10884#1 GGCGCGCGTCGGCCGGAAGCCCGTCGAGTGCCCCTGGCGACTTGGTCGGCTTCTTGGACG 475
consensus_10884#2 TGGGCCCGACGACGAGGG---CGTTGACTGCAC--AGTGAGATCGACGAGATCCTCGAC- 402
* ** ** ** * * *** ** *** * * ** * * ** ** * ***
consensus_10884#0 GCGAGTTCTTGGATGAGCTCCAGCTGCTCTGCCCCGCGAGCCTGCTCGT---CCTCCATG 534
consensus_10884#1 GCGAGTTCTTGGATGAGCTCCAGCTGCTCTGCCCCGCGAGCCTGCTCGT---CCTCCATG 532
consensus_10884#2 --------CTAGCGGAGGCCCAGCCTTTCCCCACGGCGTTTCTGGCCGCTGCCCGCCTCG 454
* * *** ***** ** * * *** *** ** ** ** *
consensus_10884#0 AGATCGCGCACCGGGTAATCCGTGCCGGCTACACGAAGGAGCTCGTCCAGAAATTCACAA 594
consensus_10884#1 AGATCGCGCACCGGGTAATCCGTGCCGGCTACACGAAGGAGCTCGTCCAGAAATTCACAA 592
consensus_10884#2 ACAGTGCCCTCCGTGTCG-CCATGTCGCGCATGACCTGCACCTCGCC-----GTCGACAA 508
* * ** * *** ** ** ** ** * * * **** * * ****
consensus_10884#0 ATTCGCCATGCGATGTTCTGGACAGGTACGACTATTTTCTTGCAGTTTAACCTACTATGT 654
consensus_10884#1 ATTCCCCATGCGATGTTCTGGACAGGT--------------------------------- 619
consensus_10884#2 GCTCACGGT-CGGTGCTTCCGCCAACG--------------------------------- 534
** * * ** ** * * **
consensus_10884#0 TTTTTTTTAATCTGAACCGTGACTTCTTTGGTTCTAAAGAAACGTTTTGTTTTTACTGTA 714
consensus_10884#1 ------------------------------------------------------------
consensus_10884#2 ------------------------------------------------------------
consensus_10884#0 ATCGTGGAACAGGTTCTTGTCGATTTTTCAGGGGGAATGCTCGCGGCGGACGACAGTGGA 774
consensus_10884#1 --------------TCTTGTCGATTTTTCAGGGGGAATGCTCGCGGCGGACGACAGTGGA 665
consensus_10884#2 --------------CCCTGTGGACACGCCTTAG--ATTGTCTCCAACAGA-GAAGGCAAA 577
* *** ** * * * ** * * ** ** * *
consensus_10884#0 TCTGATCAAGCGATGGAGCCTGGCGACTCATCTCGTCGGGAAGGCCCTCGTCGTCATGCA 834
consensus_10884#1 TCTGATCAAGCGATGGAGCCTGGCGACTCATCTCGTCGGGAAGGCCCTCGTCGTCATGCA 725
consensus_10884#2 AC--GCAAAACAGCCT--CCAACAGACAAAGCAAACAGAGGAGGCATTTTGCAT-ATGAG 632
* ** * ** *** * * * * **** * * * ***
consensus_10884#0 GCGGCAGCTGTACACGCACAACTCCCCCGGCGCCTTT-GATGCTCTCAAGGACGAGTACT 893
consensus_10884#1 GCGGCAGCTGTACACGCACAACTCCCCCGGCGCCTTT-GATGCTCTCAAGGACGAGTACT 784
consensus_10884#2 GAGAGAGGGA---ACGCAAAATTGCCGTCTCTCTCCAAGACGCAATCGTCCACACG-ATG 688
* * ** ***** ** * ** * * ** ** ** ** * *
consensus_10884#0 TCTTGGCCATCACAAAGAATCGAATCTTGAACCTGCTCAAGTTCGCAGACGATTTCACCA 953
consensus_10884#1 TCTTGGCCATCACAAAGAATCGAATCTTGAACCTGCTCAAGTTCGCAGACGATTTCACCA 844
consensus_10884#2 TGGCGGTGAGCTCGAAGATTCGCATCGGGGCGCGGC---GGCCAGCGGACGAT------G 739
* ** * * * **** *** *** * * ** * ** ******
consensus_10884#0 GCATCACGTCGCACGAGAAGCTCATTTACATCCTTGGCATGTACCAGGCTCTGAGCGAGG 1013
consensus_10884#1 GCATCACGTCGCACGAGAAGCTCATTTACATCCTTGGCATGTACCAGGCTCTGAGCGAGG 904
consensus_10884#2 ACATCGAGGCGAGCCCGCGGCCGGCGT---TTCCAGGCATGTCTACGACG--GGGCGAGG 794
**** * ** * * ** * * * ******* * * * ******
consensus_10884#0 CCGCTTCAGGCCTCCTGCTCATGTTCACCGGGCCGCACAAGGAGCTCGTTGCCGAGAGGT 1073
consensus_10884#1 CCGCTTCAGGCCTCCTGCTCATGTTCACCGGGCCGCACAAGGAGCTCGTTGCCGAGAGGT 964
consensus_10884#2 -------AGGCCGACGACGAATCCTTGTCGGGGCGC---GGCGGCGCAGCGTGGTGAGCC 844
***** * * ** * **** *** * ** * * * ***
consensus_10884#0 CCGAGGAAATCCTCGCCAAATTGG-CTATGTCGATAAGGTCCATGGTCGCCAGCCTCATA 1132
consensus_10884#1 CCGAGGAAATCCTCGCCAAATTGG-CTATGTCGATAAGGTCCATGGTCGCCAGCCTCATA 1023
consensus_10884#2 CGCGGGCGGTGCTTGCACGACGGATCCACGTCGGCGAGGCAGCAAGGTATCCACGTC--A 902
* ** * ** ** * * * * **** *** * * * ** *
consensus_10884#0 GCGAAGGTACGAGACGGTGTCTCGAACACGAAGAACATCGTCGGCGTCGGCGTCCATCCG 1192
consensus_10884#1 GCGAAGGTACGAGACGGTGTCTCGAACACGAAGAACATCGTCGGCGTCGGCGTCCATCCG 1083
consensus_10884#2 GCGAGGTGGCGAGGCG-----------AGGAGGATCTGTGTTGACG-CGGCAACGAGGCG 950
**** * **** ** * ** ** * ** * ** **** * * **
consensus_10884#0 CTGACGAAATACGCCGTGCTCTGCATCGTGCGGCTGGCGCC-GCACCGCGACACGCTCGA 1251
consensus_10884#1 CTGACGAAATACGCCGTGCTCTGCATCGTGCGGCCGGCGCC-GCACCGCGACACGCTCGA 1142
consensus_10884#2 AGGCGAATCCGCGTCGG----TGCGAGGCGCGGCGGATGCCCGTCGAGTGCCCCTGGCGA 1006
* * ** ** *** * ***** * *** * * * * * ***
consensus_10884#0 CCTGATCCTCGCGAGCGGCGGGGACGACGTAGCGTCGCTGTCCGATCTCGCGTCGCGCGT 1311
consensus_10884#1 CCTGATCCTCGCGAGCGGCGGGGACGACGTAGCGTCGCTGTCCGATCTCGCGTCGCGCGT 1202
consensus_10884#2 TTTGGTCGGCTTCTTGGACGGCGACTTCTTGGAA--GACCTCCGCTGCTCCACAGCGT-- 1062
** ** * * *** *** * * * * **** * * ***
consensus_10884#0 GGTAGGGTCCCTGGAAGAGAAGCCCGTGCTTCCCTG-CGATGACGACGCGACGGC--GGC 1368
consensus_10884#1 GGTAGGGTCCCTGGAAGAGAAGCCCGTGCTTCCCTG-CGATGACGACGCGACGGC--GGC 1259
consensus_10884#2 --CGAAGTCCCGCGGGAAGAACTCGATGGAGCCGAGGCGGCGGCGGTAGAGCAGCCAGGC 1120
***** * **** * ** ** * ** * ** * ** ***
consensus_10884#0 GGCGACCGGTTCGCGGCACCACCTCTTCCACG--CCAACAACGCCAACTTCGTGCTGCAA 1426
consensus_10884#1 GGCGACCGGTTCGCGGCACCACCTCTTCCACG--CCAACAACGCCAACTTCGTGCTGCAA 1317
consensus_10884#2 CGCCGCCGCTCCCTACCGCCGTCCCCACCACCGTCCACCGCTCCCGACCGCCGCCGCCGC 1180
** *** * * * ** * * **** *** * ** ** * * *
consensus_10884#0 AGCTGCAAGCCTCTGCTCGGGGACGAGTGGGCGGCGGCGCGCGAGAGCATCGTGGAGCGG 1486
consensus_10884#1 AGCTGCAAGCCTCTGCTCGGGGACGAGTGGGCGGCGGCGCGCGAGAGCATCGTGGAGCGG 1377
consensus_10884#2 CGCTCCCCACCACCGCTCCGAGCAAGGTGAAAAAAGAGACCCGGGAGGGAGAAAGAGA-- 1238
*** * ** * **** * * *** * * ** *** ***
consensus_10884#0 CACGTCGCGGGCTACGCCGAGGCTTGCTGGGCACCGGTCGTGGCTTGCTTGGAACCCGCG 1546
consensus_10884#1 CACGTCGCGGGCTACGCCGAGGCTTGCTGGGCACCGGTCGTGGCTTGCTTGGAACCCGCG 1437
consensus_10884#2 ------------------------------------------------------------
consensus_10884#0 GGCAGGAAGCCGGCGGCAAAAGTCGTGGCCAAGTTCAGCGCCGCGTTTGACAGAGCGTAT 1606
consensus_10884#1 GGCAGGAAGCCGGCGGCAAAAGTCGTGGCCAAGTTCAGCGCCGCGTTTGACAGAGCGTAT 1497
consensus_10884#2 ------------------------------------------------------------
consensus_10884#0 GAGAGTCAGGCGCGCTGCGAGGTCCGCGATCCCGCGCTCCGCGACGCGTTGCGAAGGGCC 1666
consensus_10884#1 GAGAGTCAGGCGCGCTGCGAGGTCCGCGATCCCGCGCTCCGCGACGCGTTGCGAAGGGCC 1557
consensus_10884#2 ------------------------------------------------------------
consensus_10884#0 GTGTCCGACAAGGTCGTGACTGCTTACGGCGTGTACCTGAAGACGCACCCCAAGCTCGAG 1726
consensus_10884#1 GTGTCCGACAAGGTCGTGACTGCTTACGGCGTGTACCTGAAGACGCACCCCAAGCTCGAG 1617
consensus_10884#2 ------------------------------------------------------------
consensus_10884#0 AAAAAACTCAGGTACACCGCCGGGGAGCTGGGCGAGCGGCTTTCGGAATTGTTCGAAGGA 1786
consensus_10884#1 AAAAAACTCAGGTACACCGCCGGGGAGCTGGGCGAGCGGCTTTCGGAATTGTTCGAAGGA 1677
consensus_10884#2 ------------------------------------------------------------
consensus_10884#0 GAAGCTGCAGAGCACAACAAATGAAGGCCGATTTCAACTTTTTTTTTTCAAACTTTTAAA 1846
consensus_10884#1 GAAGCTGCAGAGCACAACAAATGAAGGCCGATTTCAACTTTTTTTTTTCAAACTTTTAAA 1737
consensus_10884#2 ------------------------------------------------------------
consensus_10884#0 TTTTTCGTCGCATCGAACTTTCCTACACACACGAACTTCCAATTTTTCAGTTACATTGTT 1906
consensus_10884#1 TTTTTCGTCGCATCGAACTTTCCTACACACACGAACTTCCAA------------------ 1779
consensus_10884#2 ------------------------------------------------------------
consensus_10884#0 CCAATTTCTTCAAATTTCCAATTTTAGTGTGGAACTAAACACAGCCAAACAACAGACTAT 1966
consensus_10884#1 ------------------------------------------------------------
consensus_10884#2 ------------------------------------------------------------
consensus_10884#0 AGTTGTTTACCATGGATTCTTTTGTAATAACACATGTAATTTTAGAAAATAAAGAAGAGT 2026
consensus_10884#1 ------------------------------------------------------------
consensus_10884#2 ------------------------------------------------------------
consensus_10884#0 AAGGAA 2032
consensus_10884#1 ------
consensus_10884#2 ------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||