|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10898#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2295 fasta sequence
[GAGAACGTCTTTTCTCAATTGTGTTATTGCAGTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTGATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTACAGAAATGGCAGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTCCTGATTCAAGCCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGATGTGGTTCTGTACTGTGATCTGCAATTGTCCAGTGATGGTTTGGGCTTCTGCAAAACTGGATTGACATTAGA-GAACTCGACG-CTTAT-CGCCGAAGCCTT-CCCTAAGA--GGGCCAAGACATA-CAA--GGT-GAATGGA-GAGG--AAATCCATGGGGTTGG-TTTGCTTT---GGATTTCA--CCGCAGACGAGCTGTATCAGAATGTCACATTGATCCAGGACATCTTTTCTCGCCCAAGCACATTTGATGGAGCCATGGGAATGTTTACCCTTGAAGATCTTGTCGGACTCAAGCCCCCACATTTATGGGTTAATGTAGAGTATGCTTTATTTCTCCAGGAGCACAAATTAAGTGCCGAAGATTACATATTAGGATTACCAAAAGATTTTAGTGTCGCTTACATCTCCTCACCAGAAATTGGATTCTTGAAAAACGTGGGTGCTAAGCTCAAGAAAAGCAACACCAAGCTAATTTTCCGGTTTCTTAGAGAAGACGTCGCTGAGCATACCACCAAGAAAACGTATGGAGAGATCCTGAAAGACCTGAAATCCGTCAAGGCCTTTGCATCAGGGATTCTTGTCCCCAAGGAATACATTTGGCCATTGGGCAAGGACCAGTATCTGCGGCTGCCTACTAGTTTGGTCAAGGATGCACATGCCCTTGGGCTTGAAGTTTTTGCCTCTGGATTTGCCAATGATGTCTCCATGAGTTACAACTACAGCTTTGATCCCAGTGCAGAGTACTTGCAGTACATTGGCAATGCAAACTTCTCTGTCGACGGCGTGATAACGGGTTTCCCTCCCACTGCATCAGGAGCTGTTGCGTGTTTGGCAAATACCAAGGGCAATCCTCTTCCTCCTCCTGGTGGTGATGGAGGCAGGCCACTGATCATAACCCACAATGGCGCGAGCGGCGTCTACCCGGGCAGCACTGACCTCGCATATCAGCAGGCGGTGAAAGACGGCGCCGACATCATCGATTGCGCGGTCCGGATGTCGAAAGACGGCGTGGCCTTCTGCCAGCCATCTGCAGACCTCAGCACCAGCACGACGGCGTCCACCAGTTTCATGACCAAAATCTCCACTGTCAGTGAAATTCAGAACAAGTCGGGCATCTTCTCCTTTGATCTCACATGGAGCGAAATCCAAACATTAAAACCCGATCTTCTTGGTCCGTACACCCAGGCAGGCCTGAAGAGGAACCCCGCCGCGAAGAACGCCGGCAAGTTCGTGACATTGCCTGAATTCCTAGACTTGGCCAAGGCCACCAATGTCTCTGGCATCATGGTCGAGATGGAGCACGCATCGTTACTCGCGAAGCGAGGCCTCGGGCTGGTGGATGCCGTGTCGGGGGCGCTGGCGAACGCGAGCTACGACAAGGAGGGCGGGCACCTGCCGGAGCTGATGGTGGTGTCGGACGACACGTCGGTGCTGGCGGCGTTCAAGAAGTTCCCGGCGTTCAGGCGGGTGCTGATGGTGGACGAGACGGTCAGCGACGCGTCGGCGCCGTCGGTGGAGGAGATCAAGCAGTTCGCGACGGCGGTGACCGTCGGCCGCGGGTCGATCGCGCAGGTGAACGGCTTCTTCCTCACGCGGTTCACCGACGTCGCCGACCGGATGCACGCCGCCAACCTCACCGTCTACGTCGGCGTGCTCCGGAACGAGTTCATGAACCTCGGATTCGACTACTGGGCCGACCCCATCATCGAGATCGCCACCTACGCCTTCCACGTCATGGCCGACGGCCTCATCACCGAGTACCCCGCCACCGCCGCCACCTACTTCCGGAGTCCGTGCAGCGATCTGAGCCTGAACCTGAGCTACGCGATCCTGCCGGCGGACGCCGGCGCCGGTGGCTGCCGTGTGCTGGCCGCCGCCGTCGCTTCCCTGTTTCTGATACTGCTGCCATCTCATGGCTTCCATTGACGACGATCTTGATGGATGGCATTGTACTAACAGATGTTTTCTCTGCGTTTTTCTCTCCTCGTATCCTACTTTGTACTGTGTAACATAATGTTCTCTAAATAGATTATATGTGTATAAAAA]
[+] EMBL AK068914 [GAGAACGTCTTTTCTCAATTGTGTTATTGCAGTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTGATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTACAGAAATGGCAGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTCCTGATTCAAGCCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGATGTGGTTCTGTACTGTGATCTGCAATTGTCCAGTGATGGTTTGGGCTTCTGCAAAACTGGATTGACATTAGA GAACTCGACG CTTAT CGCCGAAGCCTT CCCTAAGA GGGCCAAGACATA CAA GGT GAATGGA GAGG AAATCCATGGG TGG TTTGCTTT GGATTTCA CCGCAGACGAGCTGTATCAGAATGTCACATTGATCCAGGACATCTTTTCTCGCCCAAGCACATTTGATGGAGCCATGGGAATGTTTACCCTTGAAGATCTTGTCGGACTCAAGCCCCCACATTTATGGGTTAATGTAGAGTATGCTTTATTTCTCCAGGAGCACAAATTAAGTGCCGAAGATTACATATTAGGATTACCAAAAGATTTTAGTGTCGCTTACATCTCCTCACCAGAAATTGGATTCTTGAAAAACGTGGGTGCTAAGCTCAAGAAAAGCAACACCAAGCTAATTTTCCGGTTTCTTAGAGAAGACGTCGCTGAGCATACCACCAAGAAAACGTATGGAGAGATCCTGAAAGACCTGAAATCCGTCAAGGCCTTTGCATCAGGGATTCTTGTCCCCAAGGAATACATTTGGCCATTGGGCAAGGACCAGTATCTGCGGCTGCCTACTAGTTTGGTCAAGGATGCACATGCCCTTGGGCTTGAAGTTTTTGCCTCTGGATTTGCCAATGATGTCTCCATGAGTTACAACTACAGCTTTGATCCCAGTGCAGAGTACTTGCAGTACATTGGCAATGCAAACTTCTCTGTCGACGGCGTGATAACGGGTTTCCCTCCCACTGCATCAGGAGCTGTTGCGTGTTTGGCAAATACCAAGGGCAATCCTCTTCCTCCTCCTGGTGGTGATGGAGGCAGGCCACTGATCATAACCCACAATGGCGCGAGCGGCGTCTACCCGGGCAGCACTGACCTCGCATATCAGCAGGCGGTGAAAGACGGCGCCGACATCATCGATTGCGCGGTCCGGATGTCGAAAGACGGCGTGGCCTTCTGCCAGCCATCTGCAGACCTCAGCACCAGCACGACGGCGTCCACCAGTTTCATGACCAAAATCTCCACTGTCAGTGAAATTCAGAACAAGTCGGGCATCTTCTCCTTTGATCTCACATGGAGCGAAATCCAAACATTAAAACCCGATCTTCTTGGTCCGTACACCCAGGCAGGCCTGAAGAGGAACCCCGCCGCGAAGAACGCCGGCAAGTTCGTGACATTGCCTGAATTCCTAGACTTGGCCAAGGCCACCAATGTCTCTGGCATCATGGTCGAGATGGAGCACGCATCGTTACTCGCGAAGCGAGGCCTCGGGCTGGTGGATGCCGTGTCGGGGGCGCTGGCGAACGCGAGCTACGACAAGGAGGGCGGGCACCTGCCGGAGCTGATGGTGGTGTCGGACGACACGTCGGTGCTGGCGGCGTTCAAGAAGTTCCCGGCGTTCAGGCGGGTGCTGATGGTGGACGAGACGGTCAGCGACGCGTCGGCGCCGTCGGTGGAGGAGATCAAGCAGTTCGCGACGGCGGTGACCGTCGGCCGCGGGTCGATCGCGCAGGTGAACGGCTTCTTCCTCACGCGGTTCACCGACGTCGCCGACCGGATGCACGCCGCCAACCTCACCGTCTACGTCGGCGTGCTCCGGAACGAGTTCATGAACCTCGGATTCGACTACTGGGCCGACCCCATCATCGAGATCGCCACCTACGCCTTCCACGTCATGGCCGACGGCCTCATCACCGAGTACCCCGCCACCGCCGCCACCTACTTCCGGAGTCCGTGCAGCGATCTGAGCCTGAACCTGAGCTACGCGATCCTGCCGGCGGACGCCGGCGCCGGTGGCTGCCGTGTGCTGGCCGCCGCCGTCGCTTCCCTGTTTCTGATACTGCTGCCATCTCATGGCTTCCATTGACGACGATCTTGATGGATGGCATTGTACTAACAGATGTTTTCTCTGCGTTTTTCTCTCCTCGTATCCTACTTTGTACTGTGTAACATAATGTTCTCTAAATAGA ]
[+] EMBL C72098 [ TTCTCAATTGTGTTATTGCAGTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTGATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTACAGAAATGGCAGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTCCTGATTCAAGCCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGATGTGGTTCTGTACTGTNATCTGCAATTGTCCAGTGATGGTTTGGGCTTCTGCAAAACTGGATTGACATTAGA GAACTCGACG CTTAT CGCCGAAGCCTT CCCTAAGA GGGCCAAGACATA CAN GGT GAATGGA GAGG AAATCCATGGGGT ]
[+] EMBL C71953 [ GTTATTGCAGTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTGATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTACAGAAATGGCAGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTCCTGATTCAAGCCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGATGTGGTTCTGTACTGTGATCTGCAATTGTCCAGTGATGGTTTGGGCTTCTGCAAAACTGGATTGACATTAGAGGAACTCGACGNTTTATCCGCCGAAGCCTTCCCCTAAGAGGGGGCCAAGACATANCAAAGGGTGGAATGGAGGAGGGAAAATCCATGGGGTTGGTTTTGCTTTTTGGGATTTTAANCCGAAGACGg ]
[+] EMBL C98525 [ TTCTGATACTGCTGCCATCTCATGGCTTCCATTGACGACGATCTTGATGGATGGCATTGTANTAACAGATGTTTTCTCTGCGTTTTTCTCTCCTCGTATCCTACTTTGTACTGTGTAACATAATGTTCTCTAAATAGATTATATGTGTATAAAAA]
consensusID : consensus_10898#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 687 fasta sequence
[AACGTCTTTTCTCAATTGTGTTATTGCAGTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTGATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTACAGAAATGGCAGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTCCTGATTCAAGCCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGATGTGGTTCTGTACTGTGATCTGCAATTGTCCAGTGATGGTTTGGGCTTCTGCAAAACTGGATTGACATTAGAGAACTCGACGCTTATCGCCGAAGCCTTCCCTAAGAGGGCCAAGACATACAAGGTGAATGGAGAGGAAATCCATGGGTGGTTTGCTTTGGATTTCACCGCAGACGAGCTGTATCAGAATGTCACATTGATCCAGGACATCTTTTCTCGCCGTCGCTTCCCTGTTTCTGCTACTGCTGCCATCTCATGGCTTCCATTGACGACGATCTTGATGGATGGCATTGTACTAACACATGTTTTCTCTGCGTTTTTCTCTCCTCGTATCCTACTTTGTACTGTGTAACATAATGTTCTCTAAATAGATTATATGTGTATATGAACCTGCACATAGATAAATAGAGATATATATCAAAAAAAAAA]
[-] EMBL CA762457 [AACGTCTTTTCTCAATTGTGTTATTGCAGTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTGATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTACAGAAATGGCAGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTCCTGATTCAAGCCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGATGTGGTTCTGTACTGTGATCTGCAATTGTCCAGTGATGGTTTGGGCTTCTGCAAAACTGGATTGACATTAGAGAACTCGACGCTTATCGCCGAAGCCTTCCCTAAGAGGGCCAAGACATACAAGGTGAATGGAGAGGAAATCCATGGGTGGTTTGCTTTGGATTTCACCGCAGACGAGCTGTATCAGAATGTCACATTGATCCAGGACATCTTTTCTCGCCGTCGCTTCCCTGTTTCTGCTACTGCTGCCATCTCATGGCTTCCATTGACGACGATCTTGATGGATGGCATTGTACTAACACATGTTTTCTCTGCGTTTTTCTCTCCTCGTATCCTACTTTGTACTGTGTAACATAATGTTCTCTAAATAGATTATATGTGTATATGAACCTGCACATAGATAAATAGAGATATATATCAAAAAAAAAA]
consensusID : consensus_10898#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 584 fasta sequence
[AGAGGACGAGACAAGGGGGGGGGCTGGAGAACGTCTTTTCTCAATTGTGTTATTGCAGTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTGATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTACAGAAATGGCAGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTTTCCGGCTTGTTTCCTGATTCAAGCCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGATGTGGTTCTGTACTGTGATCTGCAATTGTCCAGTGATGGTTTGGGCTTCTGCAAAACTGGATTGACATTAGAGAACTCGACGCTTATCGCCGAAGCCTTCCCTAAGAGGGCCAAGACATACAAGGTGAATGGAGAGGAAATCCATGGGTGGTTTGCTTTGGATTTCACCGCAGACGAGCTGTATCAGAATGTCACATGTAAGCAGAAAAAAAAACTGAGTAATTTCAGTCTTCAAAATGAAACATTGCATACAGTCTTTAAATAAAAATTCATTCTTTTTAAAAAAAAAAAAAAAAA]
[-] EMBL CA762458 [AGAGGACGAGACAAGGGGGGGGGCTGGAGAACGTCTTTTCTCAATTGTGTTATTGCAGTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTGATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTACAGAAATGGCAGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTTTCCGGCTTGTTTCCTGATTCAAGCCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGATGTGGTTCTGTACTGTGATCTGCAATTGTCCAGTGATGGTTTGGGCTTCTGCAAAACTGGATTGACATTAGAGAACTCGACGCTTATCGCCGAAGCCTTCCCTAAGAGGGCCAAGACATACAAGGTGAATGGAGAGGAAATCCATGGGTGGTTTGCTTTGGATTTCACCGCAGACGAGCTGTATCAGAATGTCACATGTAAGCAGAAAAAAAAACTGAGTAATTTCAGTCTTCAAAATGAAACATTGCATACAGTCTTTAAATAAAAATTCATTCTTTTTAAAAAAAAAAAAAAAAA]
consensusID : consensus_10898#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence
[GCAAAATTAAATTTAAAGTTATCTGTTCTNAAAAAAAAGATAAGTTTNATGAGAAGTTATCTTTCGCCTTTAATTTGCATGANTTTAAATTTNANGTTCTCTGCTCTGAAAAAGAAATAAGTTTGATGAGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTCCTTNATCCTCCTACTTTTNCATGGAGCCCATGCGGCTTTGAAAGATCCAGTACAGAAATGGCAGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTCCTGATTCANGCCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGATGTGGTTCTGTACTGTGATCTGCAATTGTCCAGTGATGGGTTTGGGCTTCTGCAAAANTGGATTGACATTAGGGGACTCGACGNTTATCGCC]
[+] EMBL C71801 [GCAAAATTAAATTTAAAGTTATCTGTTCTNAAAAAAAAGATAAGTTTNATGAGAAGTTATCTTTCGCCTTTAATTTGCATGANTTTAAATTTNANGTTCTCTGCTCTGAAAAAGAAATAAGTTTGATGAGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTCCTTNATCCTCCTACTTTTNCATGGAGCCCATGCGGCTTTGAAAGATCCAGTACAGAAATGGCAGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTCCTGATTCANGCCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGATGTGGTTCTGTACTGTGATCTGCAATTGTCCAGTGATGGGTTTGGGCTTCTGCAAAANTGGATTGACATTAGGGGACTCGACGNTTATCGCC]
consensusID : consensus_10898#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 440 fasta sequence
[GATCTGAGCCTGAACCTGAGCTACGCGATCCTGCCGGCGGACGCCGGCGCGCTGGTGCACCTGGCAGCGCCGGGGGCGCTGCCGCCGGCGCTGCCGCCGGCGCCGGTGCTGGAGCCGGGCGACGTGCTGGACCCGCCGTTGCCGCCTGTCGCCATTGCCAGCCCACCGGAAGAGGCGGCGACGGCGGCGAAGCCCACCGACAGCAGCAGCTCGGCGGCGGCGGCGAGATCCAGCGCCGGCGCCGGTGGCTGCCGTGTGCTGGCCGCCGCCGTCGCTTCCCTGTTTCTNANACTGCTGCCATCTCATGGCTTCCATTGACGACGATCTTGATGGATGGCATTGTACTAACAGATGTTTTCTCTGCGTTTTTCTCTCCTCGTATCCTACTTTGTACTGTGTAACATAATGTTCTCTAAATAGATTATATGTGTATAAAAAAA]
[+] EMBL AU172434 [GATCTGAGCCTGAACCTGAGCTACGCGATCCTGCCGGCGGACGCCGGCGCGCTGGTGCACCTGGCAGCGCCGGGGGCGCTGCCGCCGGCGCTGCCGCCGGCGCCGGTGCTGGAGCCGGGCGACGTGCTGGACCCGCCGTTGCCGCCTGTCGCCATTGCCAGCCCACCGGAAGAGGCGGCGACGGCGGCGAAGCCCACCGACAGCAGCAGCTCGGCGGCGGCGGCGAGATCCAGCGCCGGCGCCGGTGGCTGCCGTGTGCTGGCCGCCGCCGTCGCTTCCCTGTTTCTNANACTGCTGCCATCTCATGGCTTCCATTGACGACGATCTTGATGGATGGCATTGTACTAACAGATGTTTTCTCTGCGTTTTTCTCTCCTCGTATCCTACTTTGTACTGTGTAACATAATGTTCTCTAAATAGATTATATGTGTATAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10898#2 ---------------------------------------------------AGAGGACGA 9
consensus_10898#3 GCAAAATTAAATTTAAAGTTATCTGTTCTNAAAAAAAAGATAAGTTTNATGAGAAGTTAT 60
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 ------------------------------------------------------------
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 --------GACAAGGGGGGGGGCTGGAGAACGTCTTTTCTCAATTGTGTTATTGCA---- 57
consensus_10898#3 CTTTCGCCTTTAATTTGCATGANTTTAAATTTNANGTTCTCTGCTCTGAAAAAGAAATAA 120
consensus_10898#1 ----------------------------AACGTCTTTTCTCAATTGTGTTATTGCA---- 28
consensus_10898#0 -------------------------GAGAACGTCTTTTCTCAATTGTGTTATTGCA---- 31
consensus_10898#4 ---------------GATCTGAGCCTGAACCTGAGCTACGCGATCCTGCCGGCGGA---- 41
* * * * ** * *
consensus_10898#2 GTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTG 117
consensus_10898#3 GTTTGATGAGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTCCTTN 180
consensus_10898#1 GTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTG 88
consensus_10898#0 GTTTCATGTGAGGGTGCTCCTCCTGTCCAAATGGGAGAAAGATATCCTCACATGTTCTTG 91
consensus_10898#4 CGCCGGCGCGCTGGTGCACCTGGCAGC--GCCGGGGGCGCTGCCGCCGGCGCTGCCGCCG 99
* * ***** *** * *** * ** **
consensus_10898#2 ATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTA--CAGAAATGGC 175
consensus_10898#3 ATCCTCCTACTTTTNCATGGAGCCCATGCGGCTTTGAAAGATCCAGTA--CAGAAATGGC 238
consensus_10898#1 ATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTA--CAGAAATGGC 146
consensus_10898#0 ATCCTCCTACTTTTTCATGGAGCCCATGCGGCTTTGAAAGATCCAGTA--CAGAAATGGC 149
consensus_10898#4 GCGCCGGTGCTGGAGCCGGGCGACGTGCTGGACCCGCCGTTGCCGCCTGTCGCCATTGCC 159
* * ** * ** * * ** * ** * * ** *
consensus_10898#2 AGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTTTCCGGCTTGTTTC 235
consensus_10898#3 AGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTC 298
consensus_10898#1 AGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTC 206
consensus_10898#0 AGACTCTTGGAGGTCAGCGTCCTCTTGTCATTGCTCGTGGAGGGTTCTCCGGCTTGTTTC 209
consensus_10898#4 AGCCCACCGGAAGAGGCGGCGACGGCGGCGAAGCCCACCGACAG--CAGCAGCTCGGCGG 217
** * *** * * * * ** * ** * * *** *
consensus_10898#2 CTGATTCAAG--CCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGAT-GTGG 292
consensus_10898#3 CTGATTCANG--CCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGAT-GTGG 355
consensus_10898#1 CTGATTCAAG--CCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGAT-GTGG 263
consensus_10898#0 CTGATTCAAG--CCAGTTCTCGTACCAGTTTGCAATGTCGAGTAGCTTGCATGAT-GTGG 266
consensus_10898#4 CGGCGGCGAGATCCAGCGCCGGCGCCGGTGGCTGCCGTGTGCTGGCCGCCGCCGTCGCTT 277
* * * * **** * * ** ** ** * ** * * *
consensus_10898#2 TTCTGTACTGTGATCTGCAATTGTCCAGTGATGG-TTTGGGCTTCTGCAAAACTGGATTG 351
consensus_10898#3 TTCTGTACTGTGATCTGCAATTGTCCAGTGATGGGTTTGGGCTTCTGCAAAANTGGATTG 415
consensus_10898#1 TTCTGTACTGTGATCTGCAATTGTCCAGTGATGG-TTTGGGCTTCTGCAAAACTGGATTG 322
consensus_10898#0 TTCTGTACTGTGATCTGCAATTGTCCAGTGATGG-TTTGGGCTTCTGCAAAACTGGATTG 325
consensus_10898#4 CCCTGTTTCTNANACTGCTGCCATCTCATGGCTTCCATTGACGACGATCTTGATGGAT-G 336
**** **** ** ** * * * * ***** *
consensus_10898#2 ACATTAGAGAACTCGACGCTTATCGCCGAAGCCTTCCCTAAGAGGGCCAAGACATACAAG 411
consensus_10898#3 ACATTAGGGGACTCGACGNTTATCGCC--------------------------------- 442
consensus_10898#1 ACATTAGAGAACTCGACGCTTATCGCCGAAGCCTTCCCTAAGAGGGCCAAGACATACAAG 382
consensus_10898#0 ACATTAGAGAACTCGACGCTTATCGCCGAAGCCTTCCCTAAGAGGGCCAAGACATACAAG 385
consensus_10898#4 GCATTGTACTAACAGATGTTT-TCTCTGCGTTTTTCTCTCCTCGTATCCTACTTTGTACT 395
**** * ** * ** ** *
consensus_10898#2 GTGAATGGAGAGGAAATCCATGGG--TGGTTTGCTTTGGATTTCACCGCAGACGAGCTGT 469
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 GTGAATGGAGAGGAAATCCATGGG--TGGTTTGCTTTGGATTTCACCGCAGACGAGCTGT 440
consensus_10898#0 GTGAATGGAGAGGAAATCCATGGGGTTGGTTTGCTTTGGATTTCACCGCAGACGAGCTGT 445
consensus_10898#4 GTGTAACATAATGTTCTCTAAATAGATTATATGTGTATAAAAAAA--------------- 440
consensus_10898#2 ATCAGAATGTCACATGTAAGCAGAAAAAAAAACTGAGTAATTTCAGTCTTCAAAATGAAA 529
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ATCAGAATGTCACATTGATCCAGGACATCTTTTCTCGCCGTCGCTTCCCTGTTTCTGCTA 500
consensus_10898#0 ATCAGAATGTCACATTGATCCAGGACATCTTTTCTCGCCCAAGCACATTTGA---TGGAG 502
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 CATTGCATACAGTCTTTAAATAAAAATTCATTCTTTTTAAAAAAAAAAAAAAAAA----- 584
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 CTGCTGCCATCTCATGGCTTCCATTGACGACGATCTTGATGGATGGCATTGTACTAACAC 560
consensus_10898#0 CCATGGGAATGTTTACCCTTGAAGATCTTGTCGGACTCAAGCCCCCACATTTATGGGTTA 562
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ATGTTTTCTCTGCGTTTTTCTCTCCTCGTATCCTACTTTGTACTGTGTAACATAATGTTC 620
consensus_10898#0 ATGTAGAGTATGCTTTATTTCTCCAGGAGCACAAATTAAGTGCCGAAGATTACATATTAG 622
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 TCTAAATAGATTATATGTGTATATGAACCTGCACATAGATAAATAGAGATATATATCAAA 680
consensus_10898#0 GATTACCAAAAGATTTTAGTGTCGCTTACATCTCCTCACCAGAAATTGGATTCTTGAAAA 682
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 AAAAAAA----------------------------------------------------- 687
consensus_10898#0 ACGTGGGTGCTAAGCTCAAGAAAAGCAACACCAAGCTAATTTTCCGGTTTCTTAGAGAAG 742
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 ACGTCGCTGAGCATACCACCAAGAAAACGTATGGAGAGATCCTGAAAGACCTGAAATCCG 802
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TCAAGGCCTTTGCATCAGGGATTCTTGTCCCCAAGGAATACATTTGGCCATTGGGCAAGG 862
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 ACCAGTATCTGCGGCTGCCTACTAGTTTGGTCAAGGATGCACATGCCCTTGGGCTTGAAG 922
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TTTTTGCCTCTGGATTTGCCAATGATGTCTCCATGAGTTACAACTACAGCTTTGATCCCA 982
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 GTGCAGAGTACTTGCAGTACATTGGCAATGCAAACTTCTCTGTCGACGGCGTGATAACGG 1042
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 GTTTCCCTCCCACTGCATCAGGAGCTGTTGCGTGTTTGGCAAATACCAAGGGCAATCCTC 1102
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TTCCTCCTCCTGGTGGTGATGGAGGCAGGCCACTGATCATAACCCACAATGGCGCGAGCG 1162
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 GCGTCTACCCGGGCAGCACTGACCTCGCATATCAGCAGGCGGTGAAAGACGGCGCCGACA 1222
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TCATCGATTGCGCGGTCCGGATGTCGAAAGACGGCGTGGCCTTCTGCCAGCCATCTGCAG 1282
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 ACCTCAGCACCAGCACGACGGCGTCCACCAGTTTCATGACCAAAATCTCCACTGTCAGTG 1342
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 AAATTCAGAACAAGTCGGGCATCTTCTCCTTTGATCTCACATGGAGCGAAATCCAAACAT 1402
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TAAAACCCGATCTTCTTGGTCCGTACACCCAGGCAGGCCTGAAGAGGAACCCCGCCGCGA 1462
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 AGAACGCCGGCAAGTTCGTGACATTGCCTGAATTCCTAGACTTGGCCAAGGCCACCAATG 1522
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TCTCTGGCATCATGGTCGAGATGGAGCACGCATCGTTACTCGCGAAGCGAGGCCTCGGGC 1582
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TGGTGGATGCCGTGTCGGGGGCGCTGGCGAACGCGAGCTACGACAAGGAGGGCGGGCACC 1642
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TGCCGGAGCTGATGGTGGTGTCGGACGACACGTCGGTGCTGGCGGCGTTCAAGAAGTTCC 1702
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 CGGCGTTCAGGCGGGTGCTGATGGTGGACGAGACGGTCAGCGACGCGTCGGCGCCGTCGG 1762
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TGGAGGAGATCAAGCAGTTCGCGACGGCGGTGACCGTCGGCCGCGGGTCGATCGCGCAGG 1822
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TGAACGGCTTCTTCCTCACGCGGTTCACCGACGTCGCCGACCGGATGCACGCCGCCAACC 1882
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 TCACCGTCTACGTCGGCGTGCTCCGGAACGAGTTCATGAACCTCGGATTCGACTACTGGG 1942
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 CCGACCCCATCATCGAGATCGCCACCTACGCCTTCCACGTCATGGCCGACGGCCTCATCA 2002
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 CCGAGTACCCCGCCACCGCCGCCACCTACTTCCGGAGTCCGTGCAGCGATCTGAGCCTGA 2062
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 ACCTGAGCTACGCGATCCTGCCGGCGGACGCCGGCGCCGGTGGCTGCCGTGTGCTGGCCG 2122
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 CCGCCGTCGCTTCCCTGTTTCTGATACTGCTGCCATCTCATGGCTTCCATTGACGACGAT 2182
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 ------------------------------------------------------------
consensus_10898#3 ------------------------------------------------------------
consensus_10898#1 ------------------------------------------------------------
consensus_10898#0 CTTGATGGATGGCATTGTACTAACAGATGTTTTCTCTGCGTTTTTCTCTCCTCGTATCCT 2242
consensus_10898#4 ------------------------------------------------------------
consensus_10898#2 -----------------------------------------------------
consensus_10898#3 -----------------------------------------------------
consensus_10898#1 -----------------------------------------------------
consensus_10898#0 ACTTTGTACTGTGTAACATAATGTTCTCTAAATAGATTATATGTGTATAAAAA 2295
consensus_10898#4 -----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||