Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1092 cluster # 1092       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1092#0 length = 2678 sequences # 1  
 consensus_1092#1 length = 1442 sequences # 1  
consensusID : consensus_1092#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2678
fasta sequence 
                              [TTCCCCACCTGTTCGGCCATTCCCCACCCCACCGACGACGACGACGCTTGCAGACAACGACGCCGGCAGCTCGCGTGAGCGGATCCGTGACGACGGTTGTGCTCGCTGCTGGCGGCCCGCAGATCGAACCGCCGTGGAGGCGCTCATCGGAGGAGGAGGCGTCGGAGCAGAGCTTGCAGATGATGACGACGCCAGGTCGTGAGCGGATCCTCGATGGTGGCGGCGGCGGCGGCACTCACGTGAGCGGATCCACGGAGGCGCTCGCGGACGGCGTCGGCAGAGCTCGCGCTCGCGGATCCGCGGCGGCCCTCGCGAACGGCGTCGGCGGCACTCACGGGCGGTTTCGGCGACAGATCTCCGGCGGTGGAGGTGGGGCCTGCGCGCGAACTCCAGTGGCAGATCTCCGGTGGCGGTAGGGCTTGCAGCACAACTCCACACGGGTTCTCGGTACTCCCCCTTCCCGGGCCTTAATCTTCTTTGTTCCATTCCCTTGGCGGCAATCAACAGAGCTGGAGAAAGAACTAATTTTTTAATCCTTGAGACCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAACCTCCTATAAGGATCATCTCCACGATGTATAACGACCGCTCAAGAGGCTTAAGGCCCCCCTTATTTTTACATTGTGCATGCCCTCATGGGTGATGGAACACGTCGGCGTCCTAGGATAATACATAGTACTGCCGATATGATTTTCTTTAAAGAAGACTATACGGAAGGTAATGTAATCACGATGTCAGCATCATATCGTAGATACCGGATATGATACATTTAAAATCAAAGAAGTATTTCGTAGATATTATGCACATCATGATACCTTCATGATGATGTCGACATAGTCCTATAGATACATAGGTATCCAGATCTAGTATCTAAAGTATCATGCTGACATCAGCATGATACTGTATATGTCAGATCCGTATCGGATATGATATCTTGTAGGTATCGGATCTGATATTTACGCACCATGCTAACATATTACGACGTCAGCTATTCCGTAGAATGGAGTTACCGATTTGTAGTATTTTTGTTTTTTTCCCTACTTGTACTTCCTCTATCCCAAAATAAACCAACCTCATACCGGATGTGACATATCCTAGTGCGATGAATCGAGCCACCATTGTGTCCAGATTCATTATAAGAGGATGTGTTAAATCCCGTACGAGTTTGGTTTATTTTAGGACAGAGGGAGTAGGTGGTAGCCTTTTCCCTTTTTTGTTTTTGCTAAATTTTGCTATAGAACAACATGGCTTTGTGATTTACTTATAGCACATCGCACAAATTGACTTTTGTGGGAAGACACTCTATAAGCATGGAAATTAGCCCATGAACACCGCGCCCATTAGAATTCTTTTCTGGTTAAATAAAAGAGGGAAATCACGTGAAAGTTATGAGCTACCCATGGACCCACATGACAGGTCTCCATTTTTCTATCTCTATCTCTCTTACCCCTTCTATTTCATCTTCCTCACGCTCTCATAGGAGGATCTCTTTCCCCTTCTACTTCTTCTTCCTCTCGCTCCACAAGAGGTCAGGGTGAGGTGTTCCTGGCCTGGCATGCCTGGAAAAGGTGGGAGGCCAGTGTGGAGAGTGACAGGGAGAGCCACAACGACGGGTAGAGGAGCTCAGCTCCGACCGACAAGGAGATGATGGTGGTGGCGGGATAGGGTGATTAAAGGAGAGTGGAAATATGGGAAATTGATTCATCTTGGCGAGGCAGAGTTGATGGCATAAGGATTTGGCTGGTGAGGCTCGGGTAAGGGAGATCAACCGGTGGCAAGGTGGTGGTTGGCATGGTAGAGAGAGAGAGAGAGAGAAGAATAGAGCTCGGTGGTGGGGAGGGAAGGGCAACCTCGTTGTCTTGTATAGAAGGTGAGAGGCGGTGGCGCATCGCGGTTGTAGCGGAGGTCGGTGATGAAGACACGGCGACGGCGACTTGAGGCATAAGGAAGTGACGTCGACCTCGTCTGCTGATTGGCTTATCATGATGATGGCAGTTGGGTTGGCGGGCAACGTGCGCAGTGTGGCGACAACAGCAGTGATTATGATGCTTATGGATGGCAGCGGCGGCGCGCATGAATTTTCACTCTCTGAGCTCTCTTCTTCTCTATCTACCATGTGCTTGAGAAGAGATAGAGATAGAGATAGGAGACCTGGTATGTGGGTCTAGGTTATTTGAGAACTTTCATGTGGTTTGTCTCTCTTATTCAACCAGAAAAGATTATCCTAATAGGCGTGGTGTCCATGGACTAATTTCCACGTTTATAGGTGTATTTTCCCAAAAGTCACTTTGTGTTGTATTCTTCTATGCCTAGAACTACAAATTCACGATGTCTTAAAGTACAGGAAAAGTCTCTTATTTTTTTTGGACTAGTCCTCCAGTATACTAACGTCTTCTATTTCTTGAAGTCTCCTGGTACACTGCTGTATTGTGTAGTGCGTACGCTGTGGCGCGAAACATCGTGTTGGTAGATGACCTAAAGTGCTGTTTGGTTGGGCTCCTTTTGGACCGATACCCTTGCTACCTGAGAAATAAGTCCACTTCTCATCCCTCAGCTTTACCTCAAGTTATCTTATCCCCAATACTAAAAATTTTCATCTCTAAACTATACAAAATCGTGTAATTTGGATCCCACGATAGTATATATATCCT]

[+] EMBL AK119335             [TTCCCCACCTGTTCGGCCATTCCCCACCCCACCGACGACGACGACGCTTGCAGACAACGACGCCGGCAGCTCGCGTGAGCGGATCCGTGACGACGGTTGTGCTCGCTGCTGGCGGCCCGCAGATCGAACCGCCGTGGAGGCGCTCATCGGAGGAGGAGGCGTCGGAGCAGAGCTTGCAGATGATGACGACGCCAGGTCGTGAGCGGATCCTCGATGGTGGCGGCGGCGGCGGCACTCACGTGAGCGGATCCACGGAGGCGCTCGCGGACGGCGTCGGCAGAGCTCGCGCTCGCGGATCCGCGGCGGCCCTCGCGAACGGCGTCGGCGGCACTCACGGGCGGTTTCGGCGACAGATCTCCGGCGGTGGAGGTGGGGCCTGCGCGCGAACTCCAGTGGCAGATCTCCGGTGGCGGTAGGGCTTGCAGCACAACTCCACACGGGTTCTCGGTACTCCCCCTTCCCGGGCCTTAATCTTCTTTGTTCCATTCCCTTGGCGGCAATCAACAGAGCTGGAGAAAGAACTAATTTTTTAATCCTTGAGACCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAACCTCCTATAAGGATCATCTCCACGATGTATAACGACCGCTCAAGAGGCTTAAGGCCCCCCTTATTTTTACATTGTGCATGCCCTCATGGGTGATGGAACACGTCGGCGTCCTAGGATAATACATAGTACTGCCGATATGATTTTCTTTAAAGAAGACTATACGGAAGGTAATGTAATCACGATGTCAGCATCATATCGTAGATACCGGATATGATACATTTAAAATCAAAGAAGTATTTCGTAGATATTATGCACATCATGATACCTTCATGATGATGTCGACATAGTCCTATAGATACATAGGTATCCAGATCTAGTATCTAAAGTATCATGCTGACATCAGCATGATACTGTATATGTCAGATCCGTATCGGATATGATATCTTGTAGGTATCGGATCTGATATTTACGCACCATGCTAACATATTACGACGTCAGCTATTCCGTAGAATGGAGTTACCGATTTGTAGTATTTTTGTTTTTTTCCCTACTTGTACTTCCTCTATCCCAAAATAAACCAACCTCATACCGGATGTGACATATCCTAGTGCGATGAATCGAGCCACCATTGTGTCCAGATTCATTATAAGAGGATGTGTTAAATCCCGTACGAGTTTGGTTTATTTTAGGACAGAGGGAGTAGGTGGTAGCCTTTTCCCTTTTTTGTTTTTGCTAAATTTTGCTATAGAACAACATGGCTTTGTGATTTACTTATAGCACATCGCACAAATTGACTTTTGTGGGAAGACACTCTATAAGCATGGAAATTAGCCCATGAACACCGCGCCCATTAGAATTCTTTTCTGGTTAAATAAAAGAGGGAAATCACGTGAAAGTTATGAGCTACCCATGGACCCACATGACAGGTCTCCATTTTTCTATCTCTATCTCTCTTACCCCTTCTATTTCATCTTCCTCACGCTCTCATAGGAGGATCTCTTTCCCCTTCTACTTCTTCTTCCTCTCGCTCCACAAGAGGTCAGGGTGAGGTGTTCCTGGCCTGGCATGCCTGGAAAAGGTGGGAGGCCAGTGTGGAGAGTGACAGGGAGAGCCACAACGACGGGTAGAGGAGCTCAGCTCCGACCGACAAGGAGATGATGGTGGTGGCGGGATAGGGTGATTAAAGGAGAGTGGAAATATGGGAAATTGATTCATCTTGGCGAGGCAGAGTTGATGGCATAAGGATTTGGCTGGTGAGGCTCGGGTAAGGGAGATCAACCGGTGGCAAGGTGGTGGTTGGCATGGTAGAGAGAGAGAGAGAGAGAAGAATAGAGCTCGGTGGTGGGGAGGGAAGGGCAACCTCGTTGTCTTGTATAGAAGGTGAGAGGCGGTGGCGCATCGCGGTTGTAGCGGAGGTCGGTGATGAAGACACGGCGACGGCGACTTGAGGCATAAGGAAGTGACGTCGACCTCGTCTGCTGATTGGCTTATCATGATGATGGCAGTTGGGTTGGCGGGCAACGTGCGCAGTGTGGCGACAACAGCAGTGATTATGATGCTTATGGATGGCAGCGGCGGCGCGCATGAATTTTCACTCTCTGAGCTCTCTTCTTCTCTATCTACCATGTGCTTGAGAAGAGATAGAGATAGAGATAGGAGACCTGGTATGTGGGTCTAGGTTATTTGAGAACTTTCATGTGGTTTGTCTCTCTTATTCAACCAGAAAAGATTATCCTAATAGGCGTGGTGTCCATGGACTAATTTCCACGTTTATAGGTGTATTTTCCCAAAAGTCACTTTGTGTTGTATTCTTCTATGCCTAGAACTACAAATTCACGATGTCTTAAAGTACAGGAAAAGTCTCTTATTTTTTTTGGACTAGTCCTCCAGTATACTAACGTCTTCTATTTCTTGAAGTCTCCTGGTACACTGCTGTATTGTGTAGTGCGTACGCTGTGGCGCGAAACATCGTGTTGGTAGATGACCTAAAGTGCTGTTTGGTTGGGCTCCTTTTGGACCGATACCCTTGCTACCTGAGAAATAAGTCCACTTCTCATCCCTCAGCTTTACCTCAAGTTATCTTATCCCCAATACTAAAAATTTTCATCTCTAAACTATACAAAATCGTGTAATTTGGATCCCACGATAGTATATATATCCT]




>consensus_1092#0
TTCCCCACCTGTTCGGCCATTCCCCACCCCACCGACGACGACGACGCTTGCAGACAACGA
CGCCGGCAGCTCGCGTGAGCGGATCCGTGACGACGGTTGTGCTCGCTGCTGGCGGCCCGC
AGATCGAACCGCCGTGGAGGCGCTCATCGGAGGAGGAGGCGTCGGAGCAGAGCTTGCAGA
TGATGACGACGCCAGGTCGTGAGCGGATCCTCGATGGTGGCGGCGGCGGCGGCACTCACG
TGAGCGGATCCACGGAGGCGCTCGCGGACGGCGTCGGCAGAGCTCGCGCTCGCGGATCCG
CGGCGGCCCTCGCGAACGGCGTCGGCGGCACTCACGGGCGGTTTCGGCGACAGATCTCCG
GCGGTGGAGGTGGGGCCTGCGCGCGAACTCCAGTGGCAGATCTCCGGTGGCGGTAGGGCT
TGCAGCACAACTCCACACGGGTTCTCGGTACTCCCCCTTCCCGGGCCTTAATCTTCTTTG
TTCCATTCCCTTGGCGGCAATCAACAGAGCTGGAGAAAGAACTAATTTTTTAATCCTTGA
GACCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAACCTCCTATAAGGATCATCTCCAC
GATGTATAACGACCGCTCAAGAGGCTTAAGGCCCCCCTTATTTTTACATTGTGCATGCCC
TCATGGGTGATGGAACACGTCGGCGTCCTAGGATAATACATAGTACTGCCGATATGATTT
TCTTTAAAGAAGACTATACGGAAGGTAATGTAATCACGATGTCAGCATCATATCGTAGAT
ACCGGATATGATACATTTAAAATCAAAGAAGTATTTCGTAGATATTATGCACATCATGAT
ACCTTCATGATGATGTCGACATAGTCCTATAGATACATAGGTATCCAGATCTAGTATCTA
AAGTATCATGCTGACATCAGCATGATACTGTATATGTCAGATCCGTATCGGATATGATAT
CTTGTAGGTATCGGATCTGATATTTACGCACCATGCTAACATATTACGACGTCAGCTATT
CCGTAGAATGGAGTTACCGATTTGTAGTATTTTTGTTTTTTTCCCTACTTGTACTTCCTC
TATCCCAAAATAAACCAACCTCATACCGGATGTGACATATCCTAGTGCGATGAATCGAGC
CACCATTGTGTCCAGATTCATTATAAGAGGATGTGTTAAATCCCGTACGAGTTTGGTTTA
TTTTAGGACAGAGGGAGTAGGTGGTAGCCTTTTCCCTTTTTTGTTTTTGCTAAATTTTGC
TATAGAACAACATGGCTTTGTGATTTACTTATAGCACATCGCACAAATTGACTTTTGTGG
GAAGACACTCTATAAGCATGGAAATTAGCCCATGAACACCGCGCCCATTAGAATTCTTTT
CTGGTTAAATAAAAGAGGGAAATCACGTGAAAGTTATGAGCTACCCATGGACCCACATGA
CAGGTCTCCATTTTTCTATCTCTATCTCTCTTACCCCTTCTATTTCATCTTCCTCACGCT
CTCATAGGAGGATCTCTTTCCCCTTCTACTTCTTCTTCCTCTCGCTCCACAAGAGGTCAG
GGTGAGGTGTTCCTGGCCTGGCATGCCTGGAAAAGGTGGGAGGCCAGTGTGGAGAGTGAC
AGGGAGAGCCACAACGACGGGTAGAGGAGCTCAGCTCCGACCGACAAGGAGATGATGGTG
GTGGCGGGATAGGGTGATTAAAGGAGAGTGGAAATATGGGAAATTGATTCATCTTGGCGA
GGCAGAGTTGATGGCATAAGGATTTGGCTGGTGAGGCTCGGGTAAGGGAGATCAACCGGT
GGCAAGGTGGTGGTTGGCATGGTAGAGAGAGAGAGAGAGAGAAGAATAGAGCTCGGTGGT
GGGGAGGGAAGGGCAACCTCGTTGTCTTGTATAGAAGGTGAGAGGCGGTGGCGCATCGCG
GTTGTAGCGGAGGTCGGTGATGAAGACACGGCGACGGCGACTTGAGGCATAAGGAAGTGA
CGTCGACCTCGTCTGCTGATTGGCTTATCATGATGATGGCAGTTGGGTTGGCGGGCAACG
TGCGCAGTGTGGCGACAACAGCAGTGATTATGATGCTTATGGATGGCAGCGGCGGCGCGC
ATGAATTTTCACTCTCTGAGCTCTCTTCTTCTCTATCTACCATGTGCTTGAGAAGAGATA
GAGATAGAGATAGGAGACCTGGTATGTGGGTCTAGGTTATTTGAGAACTTTCATGTGGTT
TGTCTCTCTTATTCAACCAGAAAAGATTATCCTAATAGGCGTGGTGTCCATGGACTAATT
TCCACGTTTATAGGTGTATTTTCCCAAAAGTCACTTTGTGTTGTATTCTTCTATGCCTAG
AACTACAAATTCACGATGTCTTAAAGTACAGGAAAAGTCTCTTATTTTTTTTGGACTAGT
CCTCCAGTATACTAACGTCTTCTATTTCTTGAAGTCTCCTGGTACACTGCTGTATTGTGT
AGTGCGTACGCTGTGGCGCGAAACATCGTGTTGGTAGATGACCTAAAGTGCTGTTTGGTT
GGGCTCCTTTTGGACCGATACCCTTGCTACCTGAGAAATAAGTCCACTTCTCATCCCTCA
GCTTTACCTCAAGTTATCTTATCCCCAATACTAAAAATTTTCATCTCTAAACTATACAAA
ATCGTGTAATTTGGATCCCACGATAGTATATATATCCT

consensusID : consensus_1092#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1442
fasta sequence 
                              [GCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTGCAGACAACGACGCCGGCAGCTCGCGTGAGCGGATCCGTGACGACGGTGGTGCTCGCTGCTGGCGGCCCGCAGATCGAACCGCCGTGGAGGCGCTCATCGGAGGAGGAGGCGTCGGAGCAGAGCTTGCAGATGATGACGACGCCAGGTCGTGAGCGGATCCTCGATGGTGGCGGCGGCGGCGGCACTCACGTGAGCGGATCCACGGAGGCGCTCGCGGACGGCGTCGGCAGAGCTCGCGCTCGCGGATCCACGGCGGCCCTCGCGAACGGCGTCGGCGGCACTCACGGGCGGTTTCGGCGACAGATCTCCGGCGGTGGAGGTGGGGCCTGCGCGCGAACTCCAGTGGCAGATCTCCGGTGGCGGTAGGGCTTGCAGCACAACTCCACACGGGTTCTCGGTACTCCCCCTTCCCGGGCCTTAATCTTCTTTGTTCCATTCCCTTGGCGGCAATCAACAGAGCTGGAGAAAGAACTAATTTTTTAATCCTTGAGACCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAACCTCCTATAAGGATCATCTCCACGATGTATAACGACCGCTCAAGAGGCTTAAGGCCCCCCTTATTTTTACATTGTGCATGCCCTCATGGGTGATGGAACACGTCGGCGTCCTAGGATAATACATAGTACTGCCGATATGATTTTCTTTAAAGAAGACTATACGGAAGGTAATGTAATCACGATGTCAGCATCATATCGTAGATACCGGATATGATACATTTAAAATCAAAGAAGTATTTCGTAGATATTATGCACATCATGATACCTTCATGATGATGTCGACATAGTCCTATAGATACATAGGTATCCAGATCTAGTATCTAAAGTATCATGCTGACATCAGCATGATACTGTATATGTCAGATCCGTATCGGATATGATATCTTGTAGGTATCGGATCTGATATTTACGCACCATGCTAACATATTACGACGTCAGCTATTCCGTAGAATGGTGTTACCGATTTGTAGTATTTTTGTTTTTTTCCCTACTTGTACTTCCTCTATCCCAAAATAAACCAACCTCATACCGGATGTGACATATCCTAGTGCGATGAATCGAGCCACCATTGTGTCCAGATTCATTATAAGAGGATGTGTTAAATCCCGTACGAGTTTGGTTTATTTTAGGACAGAGGGAGTAGGTGGTAGCCTTTTCCCTTTTTTGTTTTTGCTAAATTTTGCTATAGAACAACA]

[+] EMBL AK111475             [GCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTGCAGACAACGACGCCGGCAGCTCGCGTGAGCGGATCCGTGACGACGGTGGTGCTCGCTGCTGGCGGCCCGCAGATCGAACCGCCGTGGAGGCGCTCATCGGAGGAGGAGGCGTCGGAGCAGAGCTTGCAGATGATGACGACGCCAGGTCGTGAGCGGATCCTCGATGGTGGCGGCGGCGGCGGCACTCACGTGAGCGGATCCACGGAGGCGCTCGCGGACGGCGTCGGCAGAGCTCGCGCTCGCGGATCCACGGCGGCCCTCGCGAACGGCGTCGGCGGCACTCACGGGCGGTTTCGGCGACAGATCTCCGGCGGTGGAGGTGGGGCCTGCGCGCGAACTCCAGTGGCAGATCTCCGGTGGCGGTAGGGCTTGCAGCACAACTCCACACGGGTTCTCGGTACTCCCCCTTCCCGGGCCTTAATCTTCTTTGTTCCATTCCCTTGGCGGCAATCAACAGAGCTGGAGAAAGAACTAATTTTTTAATCCTTGAGACCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAACCTCCTATAAGGATCATCTCCACGATGTATAACGACCGCTCAAGAGGCTTAAGGCCCCCCTTATTTTTACATTGTGCATGCCCTCATGGGTGATGGAACACGTCGGCGTCCTAGGATAATACATAGTACTGCCGATATGATTTTCTTTAAAGAAGACTATACGGAAGGTAATGTAATCACGATGTCAGCATCATATCGTAGATACCGGATATGATACATTTAAAATCAAAGAAGTATTTCGTAGATATTATGCACATCATGATACCTTCATGATGATGTCGACATAGTCCTATAGATACATAGGTATCCAGATCTAGTATCTAAAGTATCATGCTGACATCAGCATGATACTGTATATGTCAGATCCGTATCGGATATGATATCTTGTAGGTATCGGATCTGATATTTACGCACCATGCTAACATATTACGACGTCAGCTATTCCGTAGAATGGTGTTACCGATTTGTAGTATTTTTGTTTTTTTCCCTACTTGTACTTCCTCTATCCCAAAATAAACCAACCTCATACCGGATGTGACATATCCTAGTGCGATGAATCGAGCCACCATTGTGTCCAGATTCATTATAAGAGGATGTGTTAAATCCCGTACGAGTTTGGTTTATTTTAGGACAGAGGGAGTAGGTGGTAGCCTTTTCCCTTTTTTGTTTTTGCTAAATTTTGCTATAGAACAACA]




>consensus_1092#1
GCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGA
GCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTG
GGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCG
ATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTGCAGACAACGACGCCGGCAGC
TCGCGTGAGCGGATCCGTGACGACGGTGGTGCTCGCTGCTGGCGGCCCGCAGATCGAACC
GCCGTGGAGGCGCTCATCGGAGGAGGAGGCGTCGGAGCAGAGCTTGCAGATGATGACGAC
GCCAGGTCGTGAGCGGATCCTCGATGGTGGCGGCGGCGGCGGCACTCACGTGAGCGGATC
CACGGAGGCGCTCGCGGACGGCGTCGGCAGAGCTCGCGCTCGCGGATCCACGGCGGCCCT
CGCGAACGGCGTCGGCGGCACTCACGGGCGGTTTCGGCGACAGATCTCCGGCGGTGGAGG
TGGGGCCTGCGCGCGAACTCCAGTGGCAGATCTCCGGTGGCGGTAGGGCTTGCAGCACAA
CTCCACACGGGTTCTCGGTACTCCCCCTTCCCGGGCCTTAATCTTCTTTGTTCCATTCCC
TTGGCGGCAATCAACAGAGCTGGAGAAAGAACTAATTTTTTAATCCTTGAGACCGGTCCT
TAGCCATAAGGACGGCTCATCCAAAAACCTCCTATAAGGATCATCTCCACGATGTATAAC
GACCGCTCAAGAGGCTTAAGGCCCCCCTTATTTTTACATTGTGCATGCCCTCATGGGTGA
TGGAACACGTCGGCGTCCTAGGATAATACATAGTACTGCCGATATGATTTTCTTTAAAGA
AGACTATACGGAAGGTAATGTAATCACGATGTCAGCATCATATCGTAGATACCGGATATG
ATACATTTAAAATCAAAGAAGTATTTCGTAGATATTATGCACATCATGATACCTTCATGA
TGATGTCGACATAGTCCTATAGATACATAGGTATCCAGATCTAGTATCTAAAGTATCATG
CTGACATCAGCATGATACTGTATATGTCAGATCCGTATCGGATATGATATCTTGTAGGTA
TCGGATCTGATATTTACGCACCATGCTAACATATTACGACGTCAGCTATTCCGTAGAATG
GTGTTACCGATTTGTAGTATTTTTGTTTTTTTCCCTACTTGTACTTCCTCTATCCCAAAA
TAAACCAACCTCATACCGGATGTGACATATCCTAGTGCGATGAATCGAGCCACCATTGTG
TCCAGATTCATTATAAGAGGATGTGTTAAATCCCGTACGAGTTTGGTTTATTTTAGGACA
GAGGGAGTAGGTGGTAGCCTTTTCCCTTTTTTGTTTTTGCTAAATTTTGCTATAGAACAA
CA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1092#0      ------------------------------------------------------------
consensus_1092#1      GCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGA 60
                                                                                  

consensus_1092#0      ------------------------------------------------------------
consensus_1092#1      GCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTG 120
                                                                                  

consensus_1092#0      ------------------------------------------------TTCCCCACCTGT 12
consensus_1092#1      GGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCG 180
                                                                        *   *     

consensus_1092#0      TCGGCCATTCCCCACCCCACCG--ACGACGACGACGCTTGCAGACAACGACGCCGGCAGC 70
consensus_1092#1      ATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTGCAGACAACGACGCCGGCAGC 240
                         ** *      *** *   *  * ** **  * *  **********************

consensus_1092#0      TCGCGTGAGCGGATCCGTGACGACGGTTGTGCTCGCTGCTGGCGGCCCGCAGATCGAACC 130
consensus_1092#1      TCGCGTGAGCGGATCCGTGACGACGGTGGTGCTCGCTGCTGGCGGCCCGCAGATCGAACC 300
                      *************************** ********************************

consensus_1092#0      GCCGTGGAGGCGCTCATCGGAGGAGGAGGCGTCGGAGCAGAGCTTGCAGATGATGACGAC 190
consensus_1092#1      GCCGTGGAGGCGCTCATCGGAGGAGGAGGCGTCGGAGCAGAGCTTGCAGATGATGACGAC 360
                      ************************************************************

consensus_1092#0      GCCAGGTCGTGAGCGGATCCTCGATGGTGGCGGCGGCGGCGGCACTCACGTGAGCGGATC 250
consensus_1092#1      GCCAGGTCGTGAGCGGATCCTCGATGGTGGCGGCGGCGGCGGCACTCACGTGAGCGGATC 420
                      ************************************************************

consensus_1092#0      CACGGAGGCGCTCGCGGACGGCGTCGGCAGAGCTCGCGCTCGCGGATCCGCGGCGGCCCT 310
consensus_1092#1      CACGGAGGCGCTCGCGGACGGCGTCGGCAGAGCTCGCGCTCGCGGATCCACGGCGGCCCT 480
                      ************************************************* **********

consensus_1092#0      CGCGAACGGCGTCGGCGGCACTCACGGGCGGTTTCGGCGACAGATCTCCGGCGGTGGAGG 370
consensus_1092#1      CGCGAACGGCGTCGGCGGCACTCACGGGCGGTTTCGGCGACAGATCTCCGGCGGTGGAGG 540
                      ************************************************************

consensus_1092#0      TGGGGCCTGCGCGCGAACTCCAGTGGCAGATCTCCGGTGGCGGTAGGGCTTGCAGCACAA 430
consensus_1092#1      TGGGGCCTGCGCGCGAACTCCAGTGGCAGATCTCCGGTGGCGGTAGGGCTTGCAGCACAA 600
                      ************************************************************

consensus_1092#0      CTCCACACGGGTTCTCGGTACTCCCCCTTCCCGGGCCTTAATCTTCTTTGTTCCATTCCC 490
consensus_1092#1      CTCCACACGGGTTCTCGGTACTCCCCCTTCCCGGGCCTTAATCTTCTTTGTTCCATTCCC 660
                      ************************************************************

consensus_1092#0      TTGGCGGCAATCAACAGAGCTGGAGAAAGAACTAATTTTTTAATCCTTGAGACCGGTCCT 550
consensus_1092#1      TTGGCGGCAATCAACAGAGCTGGAGAAAGAACTAATTTTTTAATCCTTGAGACCGGTCCT 720
                      ************************************************************

consensus_1092#0      TAGCCATAAGGACGGCTCATCCAAAAACCTCCTATAAGGATCATCTCCACGATGTATAAC 610
consensus_1092#1      TAGCCATAAGGACGGCTCATCCAAAAACCTCCTATAAGGATCATCTCCACGATGTATAAC 780
                      ************************************************************

consensus_1092#0      GACCGCTCAAGAGGCTTAAGGCCCCCCTTATTTTTACATTGTGCATGCCCTCATGGGTGA 670
consensus_1092#1      GACCGCTCAAGAGGCTTAAGGCCCCCCTTATTTTTACATTGTGCATGCCCTCATGGGTGA 840
                      ************************************************************

consensus_1092#0      TGGAACACGTCGGCGTCCTAGGATAATACATAGTACTGCCGATATGATTTTCTTTAAAGA 730
consensus_1092#1      TGGAACACGTCGGCGTCCTAGGATAATACATAGTACTGCCGATATGATTTTCTTTAAAGA 900
                      ************************************************************

consensus_1092#0      AGACTATACGGAAGGTAATGTAATCACGATGTCAGCATCATATCGTAGATACCGGATATG 790
consensus_1092#1      AGACTATACGGAAGGTAATGTAATCACGATGTCAGCATCATATCGTAGATACCGGATATG 960
                      ************************************************************

consensus_1092#0      ATACATTTAAAATCAAAGAAGTATTTCGTAGATATTATGCACATCATGATACCTTCATGA 850
consensus_1092#1      ATACATTTAAAATCAAAGAAGTATTTCGTAGATATTATGCACATCATGATACCTTCATGA 1020
                      ************************************************************

consensus_1092#0      TGATGTCGACATAGTCCTATAGATACATAGGTATCCAGATCTAGTATCTAAAGTATCATG 910
consensus_1092#1      TGATGTCGACATAGTCCTATAGATACATAGGTATCCAGATCTAGTATCTAAAGTATCATG 1080
                      ************************************************************

consensus_1092#0      CTGACATCAGCATGATACTGTATATGTCAGATCCGTATCGGATATGATATCTTGTAGGTA 970
consensus_1092#1      CTGACATCAGCATGATACTGTATATGTCAGATCCGTATCGGATATGATATCTTGTAGGTA 1140
                      ************************************************************

consensus_1092#0      TCGGATCTGATATTTACGCACCATGCTAACATATTACGACGTCAGCTATTCCGTAGAATG 1030
consensus_1092#1      TCGGATCTGATATTTACGCACCATGCTAACATATTACGACGTCAGCTATTCCGTAGAATG 1200
                      ************************************************************

consensus_1092#0      GAGTTACCGATTTGTAGTATTTTTGTTTTTTTCCCTACTTGTACTTCCTCTATCCCAAAA 1090
consensus_1092#1      GTGTTACCGATTTGTAGTATTTTTGTTTTTTTCCCTACTTGTACTTCCTCTATCCCAAAA 1260
                      * **********************************************************

consensus_1092#0      TAAACCAACCTCATACCGGATGTGACATATCCTAGTGCGATGAATCGAGCCACCATTGTG 1150
consensus_1092#1      TAAACCAACCTCATACCGGATGTGACATATCCTAGTGCGATGAATCGAGCCACCATTGTG 1320
                      ************************************************************

consensus_1092#0      TCCAGATTCATTATAAGAGGATGTGTTAAATCCCGTACGAGTTTGGTTTATTTTAGGACA 1210
consensus_1092#1      TCCAGATTCATTATAAGAGGATGTGTTAAATCCCGTACGAGTTTGGTTTATTTTAGGACA 1380
                      ************************************************************

consensus_1092#0      GAGGGAGTAGGTGGTAGCCTTTTCCCTTTTTTGTTTTTGCTAAATTTTGCTATAGAACAA 1270
consensus_1092#1      GAGGGAGTAGGTGGTAGCCTTTTCCCTTTTTTGTTTTTGCTAAATTTTGCTATAGAACAA 1440
                      ************************************************************

consensus_1092#0      CATGGCTTTGTGATTTACTTATAGCACATCGCACAAATTGACTTTTGTGGGAAGACACTC 1330
consensus_1092#1      CA---------------------------------------------------------- 1442
                      **                                                          

consensus_1092#0      TATAAGCATGGAAATTAGCCCATGAACACCGCGCCCATTAGAATTCTTTTCTGGTTAAAT 1390
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      AAAAGAGGGAAATCACGTGAAAGTTATGAGCTACCCATGGACCCACATGACAGGTCTCCA 1450
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      TTTTTCTATCTCTATCTCTCTTACCCCTTCTATTTCATCTTCCTCACGCTCTCATAGGAG 1510
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      GATCTCTTTCCCCTTCTACTTCTTCTTCCTCTCGCTCCACAAGAGGTCAGGGTGAGGTGT 1570
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      TCCTGGCCTGGCATGCCTGGAAAAGGTGGGAGGCCAGTGTGGAGAGTGACAGGGAGAGCC 1630
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      ACAACGACGGGTAGAGGAGCTCAGCTCCGACCGACAAGGAGATGATGGTGGTGGCGGGAT 1690
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      AGGGTGATTAAAGGAGAGTGGAAATATGGGAAATTGATTCATCTTGGCGAGGCAGAGTTG 1750
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      ATGGCATAAGGATTTGGCTGGTGAGGCTCGGGTAAGGGAGATCAACCGGTGGCAAGGTGG 1810
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      TGGTTGGCATGGTAGAGAGAGAGAGAGAGAGAAGAATAGAGCTCGGTGGTGGGGAGGGAA 1870
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      GGGCAACCTCGTTGTCTTGTATAGAAGGTGAGAGGCGGTGGCGCATCGCGGTTGTAGCGG 1930
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      AGGTCGGTGATGAAGACACGGCGACGGCGACTTGAGGCATAAGGAAGTGACGTCGACCTC 1990
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      GTCTGCTGATTGGCTTATCATGATGATGGCAGTTGGGTTGGCGGGCAACGTGCGCAGTGT 2050
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      GGCGACAACAGCAGTGATTATGATGCTTATGGATGGCAGCGGCGGCGCGCATGAATTTTC 2110
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      ACTCTCTGAGCTCTCTTCTTCTCTATCTACCATGTGCTTGAGAAGAGATAGAGATAGAGA 2170
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      TAGGAGACCTGGTATGTGGGTCTAGGTTATTTGAGAACTTTCATGTGGTTTGTCTCTCTT 2230
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      ATTCAACCAGAAAAGATTATCCTAATAGGCGTGGTGTCCATGGACTAATTTCCACGTTTA 2290
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      TAGGTGTATTTTCCCAAAAGTCACTTTGTGTTGTATTCTTCTATGCCTAGAACTACAAAT 2350
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      TCACGATGTCTTAAAGTACAGGAAAAGTCTCTTATTTTTTTTGGACTAGTCCTCCAGTAT 2410
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      ACTAACGTCTTCTATTTCTTGAAGTCTCCTGGTACACTGCTGTATTGTGTAGTGCGTACG 2470
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      CTGTGGCGCGAAACATCGTGTTGGTAGATGACCTAAAGTGCTGTTTGGTTGGGCTCCTTT 2530
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      TGGACCGATACCCTTGCTACCTGAGAAATAAGTCCACTTCTCATCCCTCAGCTTTACCTC 2590
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      AAGTTATCTTATCCCCAATACTAAAAATTTTCATCTCTAAACTATACAAAATCGTGTAAT 2650
consensus_1092#1      ------------------------------------------------------------
                                                                                  

consensus_1092#0      TTGGATCCCACGATAGTATATATATCCT 2678
consensus_1092#1      ----------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)