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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10928#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3128 fasta sequence
[ATCCATCCCTTTTTCTCTCCATTCTCTTCTCTAATCCTCCTCTTCTCCTCGCTGCAACGCGACAAATCGAACAGATCAACCCAAATTTTGATCATCTTAAAATTCTAAATTGATCTAAGCAGTGGCATCCATTGCTACTCCTCTTCCCACTCCACCCTCTTCTCGTCTTCGTCTTCTTCCCCGACACGTCACCTCGCCGCCGATGGAGTCCCACGACGGCGGCGGCGGCGGCGGCGGCGATGGGGACTCGCTCTTCGAGGGGATGGTCCTCTTCACCCCGTCCCTCTCCGTCGATCCCGATCCCGCGCCGCCCGTCGCCGAGGCCCCCGACCCCAAGCCGCCCACCCCTCGCGACGATGCCGCCGTCGCCGGAGCTGACGGGGCGGCCTCCCAGCAGCAGCCGCCGCCGCCTCTGGATGAGGACCTGTTCTCCGATCTCACCCTCCTGTCCCCGCAGTCCCCCGTCGACCTGAGCGGCGCCCACCAAGGTCAAGATCAGGACCACTCCGCCGCCGCGCCCCCCTCGCCGGTGCCGGCTCCGGCTGCACCCGTCGCCGTTCTGGCCCGGCAGGCGTCCTCCTCGGCCTCCTCGTCGCTCCGCAAGAAGAAGAGGGCCGTGCGCATCGGGTATGGCCGCTCGCCTCAACCCGCGCCTCCTTCCCCTCCTGCCGTTGCAATTGCTGCTACGACCGCCACCGCAGCTGCTACCGCTAGTGTAATCCATGGCAGCGTCCTCCCCGATGCTTCGATGCATCATCAATCCGCTCCGACCATCCCAGTCCACCACCTCGAACACCTTGATAATGGCGTTGAGCAGGCTGCAGCGGTAGCGGTGGTGGATCCGGATGAGAATTCTCTTCATGTGAAAGAAGAGGATGGTGAATTGGAGGAGGATGGAGGTGCTGGGGCTGAAGCAATGGGGATTGAGGAGAGATTGGCTCTTCTTAGATCCCAAATCTCCGGCAAGCTCGAGTCTATCCAGCAGAGAGCCACTGCTGTGGCTGCCAAGAGGAGGCAGTTGGCTGGTAGGCGGCGAAAGGTTGCGGAGGACGTGGGCTCTGCGGCATCCAGGCACAAGGATTTGGAGAGGGAGCTTGAAGAGGCGTGCGAGGCCGAGGACTTTGAGAGGGCCGAGAAGATCAGCGACTCCCTTGCGGCATTGGAGAAGGACAAGGATCGGTTGTTGACAGCGCTGCGTGATGCGGAGCTCAATTATGATTCGGTGGATTTGGAATTGCAGGATGTGCTGGATTCCCGCATTGCCGCAGAGGAGGAAGCTGCTTCACTCCTGGAGCATTTTGCAAAGGATGCTACTGATCACACTGATTCAGCAAGCAAGGAGGCAGAAGAAATATCATTGAAAGAAATAGAAGGGTGGCGAGAATCAATGGAATTGCTAGAAACAAAGAAACTAGAGACGGAAGTAGAAAGTGAATTGGTTTTGGCAGCACGTTCAGGATTGGAAGATTCGATAGAACATCTGGTTGAAGATGACAAAAGAGAAAAGGACATGCTGAGTAAGAAAGGGGATACCCTTGCAGAGGAGTTAACTGAGCTCCTGAAATTGGTAAGGTTGAAAGAAGCAGAGATAGCTGAAAACAATGCTCAGATCCAGGAGGTTCAAGAAAGGATCACTGCCGTTGTCTCCAGATTTTATGGATCCCAGACAGATATTGATCTAAAGCTCAAAACCCTTCAGGAAGCACAAACTAAAATGGACTCAGAGGCTCAAGCACTTGCCCTAAAAAAGAATGAAATTGATAGTTTCATCTCCTTATCAGAACAGAAAGACTCAAAATTACGGGAAATTATCAATGATTGTTCCTCTGAAGCAAAAGCTTGCCAGCAGTCAGTAGATATCAGAAGGAAGCTTGCATCGTCAATTTTGAAGTCAAGGGAGGACAGAATTGGGTTGTTAAAAATGGAGGAGGAAATTTTGCAAGATATCCAAGTGCTCAGGCAACAAACATCAGATGCAAGAATCAGTCTTCAGGAGATATCTTAAGGAAGGCTGTCATTCAGCAAGATATAGCTACATTTAAGCAGAAATTGAGCTTTATTGACAAAAGGGGCCCTGAACTAGAGGCTGAAAAGAGAGTTGCTGCCGCTGCAAGGAATTTCAAGGAAGCTGGAAGGATAGCTGCTGAGGCTAAAGCGCTTTACTCTGAAAAGGAAGAACTTCATGCTAAACTTGAGAAAGCTGCTACTGATCTGGAGGTAATCGAAAAGGATATCACAGCTACCACTGACAAAATACAGGAATGCGAAGGGCTTATTATACTCAAAGAAAAAGAATCAGCCATGACAAGTTACAAAAGACTCAGGTTGGATGCTGCTGCTGCTAGAGCAGAATTGACTGCTGCAACTGAAACAGACGATAGCGAAGAGGTTGA-GGTTCTGCGGAAAGAAGCTGAAGCTGCAGAATCTAAAGCAATGGAACTAAAAACATGCTATGACCTTGAACTGGACGACAACGAAATCATGTTTCAGCCTGTAGTCCCTATAGTATTCATAACCAATTCAACAGGGCAGCACTTGCTAGAAATTGCGTCTTCT-TTCGGTCTATCCCCCTAGAAGCAAACTTCGACAGTACTT-GCAT-GCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACAGCCAAGTGTATAACATCCATTTTGCGTACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATT-C-TTTGTTGTTGTGGTAATTTTGGTTGAGCTACAGTAAATGCCATTCATCCGAATGTAATCAGTATAAGTTATCCATGAAATAAACTCTCTTCTGCATTGCACAACTAGTCACATCGAGTCATCGAGTATGTGTTGAAAGTTAGTCCTAGCTAAGAACTGTTTTATAGAGTTGTTGCTTCAGCATGAAGAAGCTGTGAACCTCACAGGCCGTTGTGAAATCTATCCTACTCTCTACCTGCCAAATATAATCACCAAAAGGGAGTGACAT]
[+] EMBL AK072130 [ATCCATCCCTTTTTCTCTCCATTCTCTTCTCTAATCCTCCTCTTCTCCTCGCTGCAACGCGACAAATCGAACAGATCAACCCAAATTTTGATCATCTTAAAATTCTAAATTGATCTAAGCAGTGGCATCCATTGCTACTCCTCTTCCCACTCCACCCTCTTCTCGTCTTCGTCTTCTTCCCCGACACGTCACCTCGCCGCCGATGGAGTCCCACGACGGCGGCGGCGGCGGCGGCGGCGATGGGGACTCGCTCTTCGAGGGGATGGTCCTCTTCACCCCGTCCCTCTCCGTCGATCCCGATCCCGCGCCGCCCGTCGCCGAGGCCCCCGACCCCAAGCCGCCCACCCCTCGCGACGATGCCGCCGTCGCCGGAGCTGACGGGGCGGCCTCCCAGCAGCAGCCGCCGCCGCCTCTGGATGAGGACCTGTTCTCCGATCTCACCCTCCTGTCCCCGCAGTCCCCCGTCGACCTGAGCGGCGCCCACCAAGGTCAAGATCAGGACCACTCCGCCGCCGCGCCCCCCTCGCCGGTGCCGGCTCCGGCTGCACCCGTCGCCGTTCTGGCCCGGCAGGCGTCCTCCTCGGCCTCCTCGTCGCTCCGCAAGAAGAAGAGGGCCGTGCGCATCGGGTATGGCCGCTCGCCTCAACCCGCGCCTCCTTCCCCTCCTGCCGTTGCAATTGCTGCTACGACCGCCACCGCAGCTGCTACCGCTAGTGTAATCCATGGCAGCGTCCTCCCCGATGCTTCGATGCATCATCAATCCGCTCCGACCATCCCAGTCCACCACCTCGAACACCTTGATAATGGCGTTGAGCAGGCTGCAGCGGTAGCGGTGGTGGATCCGGATGAGAATTCTCTTCATGTGAAAGAAGAGGATGGTGAATTGGAGGAGGATGGAGGTGCTGGGGCTGAAGCAATGGGGATTGAGGAGAGATTGGCTCTTCTTAGATCCCAAATCTCCGGCAAGCTCGAGTCTATCCAGCAGAGAGCCACTGCTGTGGCTGCCAAGAGGAGGCAGTTGGCTGGTAGGCGGCGAAAGGTTGCGGAGGACGTGGGCTCTGCGGCATCCAGGCACAAGGATTTGGAGAGGGAGCTTGAAGAGGCGTGCGAGGCCGAGGACTTTGAGAGGGCCGAGAAGATCAGCGACTCCCTTGCGGCATTGGAGAAGGACAAGGATCGGTTGTTGACAGCGCTGCGTGATGCGGAGCTCAATTATGATTCGGTGGATTTGGAATTGCAGGATGTGCTGGATTCCCGCATTGCCGCAGAGGAGGAAGCTGCTTCACTCCTGGAGCATTTTGCAAAGGATGCTACTGATCACACTGATTCAGCAAGCAAGGAGGCAGAAGAAATATCATTGAAAGAAATAGAAGGGTGGCGAGAATCAATGGAATTGCTAGAAACAAAGAAACTAGAGACGGAAGTAGAAAGTGAATTGGTTTTGGCAGCACGTTCAGGATTGGAAGATTCGATAGAACATCTGGTTGAAGATGACAAAAGAGAAAAGGACATGCTGAGTAAGAAAGGGGATACCCTTGCAGAGGAGTTAACTGAGCTCCTGAAATTGGTAAGGTTGAAAGAAGCAGAGATAGCTGAAAACAATGCTCAGATCCAGGAGGTTCAAGAAAGGATCACTGCCGTTGTCTCCAGATTTTATGGATCCCAGACAGATATTGATCTAAAGCTCAAAACCCTTCAGGAAGCACAAACTAAAATGGACTCAGAGGCTCAAGCACTTGCCCTAAAAAAGAATGAAATTGATAGTTTCATCTCCTTATCAGAACAGAAAGACTCAAAATTACGGGAAATTATCAATGATTGTTCCTCTGAAGCAAAAGCTTGCCAGCAGTCAGTAGATATCAGAAGGAAGCTTGCATCGTCAATTTTGAAGTCAAGGGAGGACAGAATTGGGTTGTTAAAAATGGAGGAGGAAATTTTGCAAGATATCCAAGTGCTCAGGCAACAAACATCAGATGCAAGAATCAGTCTTCAGGAGATATCTTAAGGAAGGCTGTCATTCAGCAAGATATAGCTACATTTAAGCAGAAATTGAGCTTTATTGACAAAAGGGGCCCTGAACTAGAGGCTGAAAAGAGAGTTGCTGCCGCTGCAAGGAATTTCAAGGAAGCTGGAAGGATAGCTGCTGAGGCTAAAGCGCTTTACTCTGAAAAGGAAGAACTTCATGCTAAACTTGAGAAAGCTGCTACTGATCTGGAGGTAATCGAAAAGGATATCACAGCTACCACTGACAAAATACAGGAATGCGAAGGGCTTATTATACTCAAAGAAAAAGAATCAGCCATGACAAGTTACAAAAGACTCAGGTTGGATGCTGCTGCTGCTAGAGCAGAATTGACTGCTGCAACTGAAACAGACGATAGCGAAGAGGTTGA GGTTCTGCGGAAAGAAGCTGAAGCTGCAGAATCTAAAGCAATGGAACTAAAAACATGCTATGACCTTGAACTGGACGACAACGAAATCATGTTTCAGCCTGTAGTCCCTATAGTATTCATAACCAATTCAACAGGGCAGCACTTGCTAGAAATTGCGTCTTCT TTCGGTCTATCCCCCTAGAAGCAAACTTCGACAGTACTT GCAT GCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACAGCCAAGTGTATAACATCCATTTTGCGTACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATT C TTTGTTGTTGTGGTAATTTTGGTTGAGCTACAGTAAATGCCATTCATCCGAATGTAATCAGTATAAGTTATCCATGAAATAAAC ]
[+] EMBL CB647963 [ TACTCCTCTTCCCACTCCACCCTCTTCTCGTCTTCGTCTTCTTCCCCGACACGTCACCTCGCCGCCGATGGAGTCCCACGACGGCGGCGGCGGCGGGGGCGGCGATGGGGACTCGCTCTTCGAGGGGATGGTCCTCTTCACCCCGTCCCTCTCCGTCGATCCCGATCCCGCGCCGCCCGTCGCCGAGGCCCCCGACCCCAAGCCGCCCACCCCTCGCGACGATGCCGCCGTCGCCGGAGCTGACGGGGCGGCCTCCCAGCAGCAGCCGCCGCCGCCTCTGGATGACGACCTGTTGTCCGATCTCCCCCTCCTGTCCCCGCAGTCCCCCGTCGACCTGAGCGGCGCCCACCCAGGTCAAGATCAGGACCACTCCGCCGCCGCGCCCCCCTCGCCGGTGC ]
[+] EMBL CB676492 [ CTCGGCCTCCTCGTCGCTCCGCAAGAAGAAGAGGGCCGTGCGCATCGGGTATGGCCGCTCGCCTCAACCCGCGCCTCCTTCCCCTCCTGCCGTTGCAATTGCTGCTACGACCGCCACCGCAGCTGCTACCGCTAGTGTAATCCATGGCAGCGTCCTCCCCGATGCTTCGATGCATCATCAATCCGCTCCGACCATCCCAGTCCACCACCTCGAACACCTTGATAATGGCGTTGAGCAGGCTGCAGCGGTAGCGGTGGTGGATCCGGATGAGAATTCTCTTCATGTGAAAGAAGAGGATGGTGAATTGGAGGAGGATGGAGGTGCTGGGGCTGAAGCAATGGGGATTGAGGAGAGATTGGCTCTTCTTAGATCCCAAATCTCCGGCAAGCTCGAGTCTATCCAGCAGAGAGCCACTGCTGTGGCTGCCAAGAGGAGGCAGTTGGCTGGTAGGCGGCGAAAGGTTGCGGAGGACGTGGGCTCTGCGGCATCCAGGCACAAGGATTTGGAGAGGGAGCTTGAAGAGGCGTGCGAGGCCGAGGACTTTGAGAGGGCCGAGAAGATCAGCGACTCCCTTGCGGCATTGGAGAAGGACAAGGATCGGTTGTTGACAGCGCTGCGTGATGCGGAGCTCAATTATGATTCGGTGGATTTGGAATTGCAGGATGTGCTGGATTCCCGCATTGCCGCAGAGGAGGAAGCTGCTTCACTCCTGGAGCATTTTGCAAAGGATGCTACTGATCACACTGATTCAGCAAGCAAGGAGGCAGAAGAAAT ]
[+] EMBL D43426 [ AGTAGAAAGTGAATTGGTTTTGGCAGCACGTTCAGGATTGGAAGATTCGATAGAACATCTGGTTGAAGATGACAAAAGAGAAAAGGACATGCTGAGTAAGAAAGGGGATACCCTTGCAGAGGAGTTAACTGAGCTCCTGAAATTGGTAAGGTTGAAAGAAGCAGNGATAGCTNAAAACAATGCTCAGATCCAGGGGGTTCAAGGAAGGTTCACTNCCGTTTTC ]
[-] EMBL CB676493 [ CAGGAATGCGAAGGGCTTATTATACTCAAAGAAAAAGAATCAGCCATGACAAGTTACAAAAGACTCAGGTTGGATGCTGCTGCTGCTAGAGCAGAATTGACTGCTGCAACTGAAACAGACGATAGCGAAGAGGTTGA GGTTCTGCGGAAAGAAGCTGAAGCTGCAGAATCTAAAGCAATGGAACTAAAAACATGCTATGACCTTGAACTGGACGACAACGAAATCATGTTTCAGCCTGTAGTCCCTATAGTATTCATAACCAATTCAACAGGGCAGCACTTGCTAGAAATTGCGTCTTCT TTCGGTCTATCCCCCTAGAAGCAAACTTCGACAGTACTT GCAT GCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACAGCCAAGTGTATAACATCCATTTTGCGTACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATT CTTTTGTTGTTGTGGTAATTTTGGTTGAGCTACAGTAAATGCCATTCATCCGAATGTAATCAGTATAAGTTATCCATGAAATAAACTCTCTTCT ]
[-] EMBL CB647964 [ AAGGGCTTATTATACTCAAAGAAAAAGAATCAGCCATGACAAGTTACAAAAGACTCAGGTTGGATGCTGCTGCTGCTAGAGCAGAATTGACTGCTGCAACTGAAACAGACGATAGCGAAGAGGTTGA GGTTCTGCGGAAAGAAGCTGAAGCTGCAGAATCTAAAGCAATGGAACTAAAAACATGCTATGACCTTGAACTGGACGACAACGAAATCATGTTTCAGCCTGTAGTCCCTATAGTATTCATAACCAATTCAACAGGGCAGCACTTGCTAGAAATTGCGTCTTCT TTCGGTCTATCCCCCTAGAAGCAAACTTCGACAGTACTT GCAT GCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACAGCCAAGTGTATAACATCCATTTTGCGTACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATT CTTTTGTTGTTGTGGTAATTTTGGTTGAGCTACAGTAAATGCCATTCATCCGAATGTAATCAGTATAAGTTAGCCATGAAATAAAC ]
[+] EMBL BM419229 [ tTTGAGGGTTCTCCGGAAAGAAGCTGAAGCTGCAGAATCTAAAGCAATGGAACTAAAGACATGCTATGACCTTGAACTGGACGACAACAAAATCATGTTTCAGCCTGTAGTCCCTATAGTATTCATAACCAATTCAACAGGGCAGCACTTGCTAGAAATTGCGTCTTCTGTTCGGTCTATCCCCCTAGAAGCAAACTTCGACAGTACTTGGCATGGCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACA CCAAGTGTATAACATCCA TTTGCATACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATT CTTTTGTTGTTGTGGTAATTTT GTTGAGC CCNTAAATCCCATTCATCCGAATGTAAaaaaaa ]
[+] EMBL CA764585 [ gggCTNGAAGCAAACTTCGACAGTACTTGGCAT GCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACAGCCAAGTGTATAACATCCATTTTGCATACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATTCC TTTGTTGTTGTGGTAATTTTGGTTGAGCTACAGTAAATGCCATTCATCCGAATGTAATCAGTATAAGTTATCCATGAAATAAACTCTCTTCTGCATTGCACAACTAGTCACATCGAGTCATCGAGTATGTGTTGAAAGTTAGTCCTAGCTAAGAACTGTTTTATAGAGTTGTTGCTTCAGCATGAAGAAGCTGTGAACCTCACAGGCCGTTGTGAAATCTATCCTACTCTCTACCTGCCAAATATAATCACCAAAAGGGAGTGACAT]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||