These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10928#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3128 fasta sequence [ATCCATCCCTTTTTCTCTCCATTCTCTTCTCTAATCCTCCTCTTCTCCTCGCTGCAACGCGACAAATCGAACAGATCAACCCAAATTTTGATCATCTTAAAATTCTAAATTGATCTAAGCAGTGGCATCCATTGCTACTCCTCTTCCCACTCCACCCTCTTCTCGTCTTCGTCTTCTTCCCCGACACGTCACCTCGCCGCCGATGGAGTCCCACGACGGCGGCGGCGGCGGCGGCGGCGATGGGGACTCGCTCTTCGAGGGGATGGTCCTCTTCACCCCGTCCCTCTCCGTCGATCCCGATCCCGCGCCGCCCGTCGCCGAGGCCCCCGACCCCAAGCCGCCCACCCCTCGCGACGATGCCGCCGTCGCCGGAGCTGACGGGGCGGCCTCCCAGCAGCAGCCGCCGCCGCCTCTGGATGAGGACCTGTTCTCCGATCTCACCCTCCTGTCCCCGCAGTCCCCCGTCGACCTGAGCGGCGCCCACCAAGGTCAAGATCAGGACCACTCCGCCGCCGCGCCCCCCTCGCCGGTGCCGGCTCCGGCTGCACCCGTCGCCGTTCTGGCCCGGCAGGCGTCCTCCTCGGCCTCCTCGTCGCTCCGCAAGAAGAAGAGGGCCGTGCGCATCGGGTATGGCCGCTCGCCTCAACCCGCGCCTCCTTCCCCTCCTGCCGTTGCAATTGCTGCTACGACCGCCACCGCAGCTGCTACCGCTAGTGTAATCCATGGCAGCGTCCTCCCCGATGCTTCGATGCATCATCAATCCGCTCCGACCATCCCAGTCCACCACCTCGAACACCTTGATAATGGCGTTGAGCAGGCTGCAGCGGTAGCGGTGGTGGATCCGGATGAGAATTCTCTTCATGTGAAAGAAGAGGATGGTGAATTGGAGGAGGATGGAGGTGCTGGGGCTGAAGCAATGGGGATTGAGGAGAGATTGGCTCTTCTTAGATCCCAAATCTCCGGCAAGCTCGAGTCTATCCAGCAGAGAGCCACTGCTGTGGCTGCCAAGAGGAGGCAGTTGGCTGGTAGGCGGCGAAAGGTTGCGGAGGACGTGGGCTCTGCGGCATCCAGGCACAAGGATTTGGAGAGGGAGCTTGAAGAGGCGTGCGAGGCCGAGGACTTTGAGAGGGCCGAGAAGATCAGCGACTCCCTTGCGGCATTGGAGAAGGACAAGGATCGGTTGTTGACAGCGCTGCGTGATGCGGAGCTCAATTATGATTCGGTGGATTTGGAATTGCAGGATGTGCTGGATTCCCGCATTGCCGCAGAGGAGGAAGCTGCTTCACTCCTGGAGCATTTTGCAAAGGATGCTACTGATCACACTGATTCAGCAAGCAAGGAGGCAGAAGAAATATCATTGAAAGAAATAGAAGGGTGGCGAGAATCAATGGAATTGCTAGAAACAAAGAAACTAGAGACGGAAGTAGAAAGTGAATTGGTTTTGGCAGCACGTTCAGGATTGGAAGATTCGATAGAACATCTGGTTGAAGATGACAAAAGAGAAAAGGACATGCTGAGTAAGAAAGGGGATACCCTTGCAGAGGAGTTAACTGAGCTCCTGAAATTGGTAAGGTTGAAAGAAGCAGAGATAGCTGAAAACAATGCTCAGATCCAGGAGGTTCAAGAAAGGATCACTGCCGTTGTCTCCAGATTTTATGGATCCCAGACAGATATTGATCTAAAGCTCAAAACCCTTCAGGAAGCACAAACTAAAATGGACTCAGAGGCTCAAGCACTTGCCCTAAAAAAGAATGAAATTGATAGTTTCATCTCCTTATCAGAACAGAAAGACTCAAAATTACGGGAAATTATCAATGATTGTTCCTCTGAAGCAAAAGCTTGCCAGCAGTCAGTAGATATCAGAAGGAAGCTTGCATCGTCAATTTTGAAGTCAAGGGAGGACAGAATTGGGTTGTTAAAAATGGAGGAGGAAATTTTGCAAGATATCCAAGTGCTCAGGCAACAAACATCAGATGCAAGAATCAGTCTTCAGGAGATATCTTAAGGAAGGCTGTCATTCAGCAAGATATAGCTACATTTAAGCAGAAATTGAGCTTTATTGACAAAAGGGGCCCTGAACTAGAGGCTGAAAAGAGAGTTGCTGCCGCTGCAAGGAATTTCAAGGAAGCTGGAAGGATAGCTGCTGAGGCTAAAGCGCTTTACTCTGAAAAGGAAGAACTTCATGCTAAACTTGAGAAAGCTGCTACTGATCTGGAGGTAATCGAAAAGGATATCACAGCTACCACTGACAAAATACAGGAATGCGAAGGGCTTATTATACTCAAAGAAAAAGAATCAGCCATGACAAGTTACAAAAGACTCAGGTTGGATGCTGCTGCTGCTAGAGCAGAATTGACTGCTGCAACTGAAACAGACGATAGCGAAGAGGTTGA-GGTTCTGCGGAAAGAAGCTGAAGCTGCAGAATCTAAAGCAATGGAACTAAAAACATGCTATGACCTTGAACTGGACGACAACGAAATCATGTTTCAGCCTGTAGTCCCTATAGTATTCATAACCAATTCAACAGGGCAGCACTTGCTAGAAATTGCGTCTTCT-TTCGGTCTATCCCCCTAGAAGCAAACTTCGACAGTACTT-GCAT-GCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACAGCCAAGTGTATAACATCCATTTTGCGTACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATT-C-TTTGTTGTTGTGGTAATTTTGGTTGAGCTACAGTAAATGCCATTCATCCGAATGTAATCAGTATAAGTTATCCATGAAATAAACTCTCTTCTGCATTGCACAACTAGTCACATCGAGTCATCGAGTATGTGTTGAAAGTTAGTCCTAGCTAAGAACTGTTTTATAGAGTTGTTGCTTCAGCATGAAGAAGCTGTGAACCTCACAGGCCGTTGTGAAATCTATCCTACTCTCTACCTGCCAAATATAATCACCAAAAGGGAGTGACAT] [+] EMBL AK072130 [ATCCATCCCTTTTTCTCTCCATTCTCTTCTCTAATCCTCCTCTTCTCCTCGCTGCAACGCGACAAATCGAACAGATCAACCCAAATTTTGATCATCTTAAAATTCTAAATTGATCTAAGCAGTGGCATCCATTGCTACTCCTCTTCCCACTCCACCCTCTTCTCGTCTTCGTCTTCTTCCCCGACACGTCACCTCGCCGCCGATGGAGTCCCACGACGGCGGCGGCGGCGGCGGCGGCGATGGGGACTCGCTCTTCGAGGGGATGGTCCTCTTCACCCCGTCCCTCTCCGTCGATCCCGATCCCGCGCCGCCCGTCGCCGAGGCCCCCGACCCCAAGCCGCCCACCCCTCGCGACGATGCCGCCGTCGCCGGAGCTGACGGGGCGGCCTCCCAGCAGCAGCCGCCGCCGCCTCTGGATGAGGACCTGTTCTCCGATCTCACCCTCCTGTCCCCGCAGTCCCCCGTCGACCTGAGCGGCGCCCACCAAGGTCAAGATCAGGACCACTCCGCCGCCGCGCCCCCCTCGCCGGTGCCGGCTCCGGCTGCACCCGTCGCCGTTCTGGCCCGGCAGGCGTCCTCCTCGGCCTCCTCGTCGCTCCGCAAGAAGAAGAGGGCCGTGCGCATCGGGTATGGCCGCTCGCCTCAACCCGCGCCTCCTTCCCCTCCTGCCGTTGCAATTGCTGCTACGACCGCCACCGCAGCTGCTACCGCTAGTGTAATCCATGGCAGCGTCCTCCCCGATGCTTCGATGCATCATCAATCCGCTCCGACCATCCCAGTCCACCACCTCGAACACCTTGATAATGGCGTTGAGCAGGCTGCAGCGGTAGCGGTGGTGGATCCGGATGAGAATTCTCTTCATGTGAAAGAAGAGGATGGTGAATTGGAGGAGGATGGAGGTGCTGGGGCTGAAGCAATGGGGATTGAGGAGAGATTGGCTCTTCTTAGATCCCAAATCTCCGGCAAGCTCGAGTCTATCCAGCAGAGAGCCACTGCTGTGGCTGCCAAGAGGAGGCAGTTGGCTGGTAGGCGGCGAAAGGTTGCGGAGGACGTGGGCTCTGCGGCATCCAGGCACAAGGATTTGGAGAGGGAGCTTGAAGAGGCGTGCGAGGCCGAGGACTTTGAGAGGGCCGAGAAGATCAGCGACTCCCTTGCGGCATTGGAGAAGGACAAGGATCGGTTGTTGACAGCGCTGCGTGATGCGGAGCTCAATTATGATTCGGTGGATTTGGAATTGCAGGATGTGCTGGATTCCCGCATTGCCGCAGAGGAGGAAGCTGCTTCACTCCTGGAGCATTTTGCAAAGGATGCTACTGATCACACTGATTCAGCAAGCAAGGAGGCAGAAGAAATATCATTGAAAGAAATAGAAGGGTGGCGAGAATCAATGGAATTGCTAGAAACAAAGAAACTAGAGACGGAAGTAGAAAGTGAATTGGTTTTGGCAGCACGTTCAGGATTGGAAGATTCGATAGAACATCTGGTTGAAGATGACAAAAGAGAAAAGGACATGCTGAGTAAGAAAGGGGATACCCTTGCAGAGGAGTTAACTGAGCTCCTGAAATTGGTAAGGTTGAAAGAAGCAGAGATAGCTGAAAACAATGCTCAGATCCAGGAGGTTCAAGAAAGGATCACTGCCGTTGTCTCCAGATTTTATGGATCCCAGACAGATATTGATCTAAAGCTCAAAACCCTTCAGGAAGCACAAACTAAAATGGACTCAGAGGCTCAAGCACTTGCCCTAAAAAAGAATGAAATTGATAGTTTCATCTCCTTATCAGAACAGAAAGACTCAAAATTACGGGAAATTATCAATGATTGTTCCTCTGAAGCAAAAGCTTGCCAGCAGTCAGTAGATATCAGAAGGAAGCTTGCATCGTCAATTTTGAAGTCAAGGGAGGACAGAATTGGGTTGTTAAAAATGGAGGAGGAAATTTTGCAAGATATCCAAGTGCTCAGGCAACAAACATCAGATGCAAGAATCAGTCTTCAGGAGATATCTTAAGGAAGGCTGTCATTCAGCAAGATATAGCTACATTTAAGCAGAAATTGAGCTTTATTGACAAAAGGGGCCCTGAACTAGAGGCTGAAAAGAGAGTTGCTGCCGCTGCAAGGAATTTCAAGGAAGCTGGAAGGATAGCTGCTGAGGCTAAAGCGCTTTACTCTGAAAAGGAAGAACTTCATGCTAAACTTGAGAAAGCTGCTACTGATCTGGAGGTAATCGAAAAGGATATCACAGCTACCACTGACAAAATACAGGAATGCGAAGGGCTTATTATACTCAAAGAAAAAGAATCAGCCATGACAAGTTACAAAAGACTCAGGTTGGATGCTGCTGCTGCTAGAGCAGAATTGACTGCTGCAACTGAAACAGACGATAGCGAAGAGGTTGA GGTTCTGCGGAAAGAAGCTGAAGCTGCAGAATCTAAAGCAATGGAACTAAAAACATGCTATGACCTTGAACTGGACGACAACGAAATCATGTTTCAGCCTGTAGTCCCTATAGTATTCATAACCAATTCAACAGGGCAGCACTTGCTAGAAATTGCGTCTTCT TTCGGTCTATCCCCCTAGAAGCAAACTTCGACAGTACTT GCAT GCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACAGCCAAGTGTATAACATCCATTTTGCGTACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATT C TTTGTTGTTGTGGTAATTTTGGTTGAGCTACAGTAAATGCCATTCATCCGAATGTAATCAGTATAAGTTATCCATGAAATAAAC ] [+] EMBL CB647963 [ TACTCCTCTTCCCACTCCACCCTCTTCTCGTCTTCGTCTTCTTCCCCGACACGTCACCTCGCCGCCGATGGAGTCCCACGACGGCGGCGGCGGCGGGGGCGGCGATGGGGACTCGCTCTTCGAGGGGATGGTCCTCTTCACCCCGTCCCTCTCCGTCGATCCCGATCCCGCGCCGCCCGTCGCCGAGGCCCCCGACCCCAAGCCGCCCACCCCTCGCGACGATGCCGCCGTCGCCGGAGCTGACGGGGCGGCCTCCCAGCAGCAGCCGCCGCCGCCTCTGGATGACGACCTGTTGTCCGATCTCCCCCTCCTGTCCCCGCAGTCCCCCGTCGACCTGAGCGGCGCCCACCCAGGTCAAGATCAGGACCACTCCGCCGCCGCGCCCCCCTCGCCGGTGC ] [+] EMBL CB676492 [ CTCGGCCTCCTCGTCGCTCCGCAAGAAGAAGAGGGCCGTGCGCATCGGGTATGGCCGCTCGCCTCAACCCGCGCCTCCTTCCCCTCCTGCCGTTGCAATTGCTGCTACGACCGCCACCGCAGCTGCTACCGCTAGTGTAATCCATGGCAGCGTCCTCCCCGATGCTTCGATGCATCATCAATCCGCTCCGACCATCCCAGTCCACCACCTCGAACACCTTGATAATGGCGTTGAGCAGGCTGCAGCGGTAGCGGTGGTGGATCCGGATGAGAATTCTCTTCATGTGAAAGAAGAGGATGGTGAATTGGAGGAGGATGGAGGTGCTGGGGCTGAAGCAATGGGGATTGAGGAGAGATTGGCTCTTCTTAGATCCCAAATCTCCGGCAAGCTCGAGTCTATCCAGCAGAGAGCCACTGCTGTGGCTGCCAAGAGGAGGCAGTTGGCTGGTAGGCGGCGAAAGGTTGCGGAGGACGTGGGCTCTGCGGCATCCAGGCACAAGGATTTGGAGAGGGAGCTTGAAGAGGCGTGCGAGGCCGAGGACTTTGAGAGGGCCGAGAAGATCAGCGACTCCCTTGCGGCATTGGAGAAGGACAAGGATCGGTTGTTGACAGCGCTGCGTGATGCGGAGCTCAATTATGATTCGGTGGATTTGGAATTGCAGGATGTGCTGGATTCCCGCATTGCCGCAGAGGAGGAAGCTGCTTCACTCCTGGAGCATTTTGCAAAGGATGCTACTGATCACACTGATTCAGCAAGCAAGGAGGCAGAAGAAAT ] [+] EMBL D43426 [ AGTAGAAAGTGAATTGGTTTTGGCAGCACGTTCAGGATTGGAAGATTCGATAGAACATCTGGTTGAAGATGACAAAAGAGAAAAGGACATGCTGAGTAAGAAAGGGGATACCCTTGCAGAGGAGTTAACTGAGCTCCTGAAATTGGTAAGGTTGAAAGAAGCAGNGATAGCTNAAAACAATGCTCAGATCCAGGGGGTTCAAGGAAGGTTCACTNCCGTTTTC ] [-] EMBL CB676493 [ CAGGAATGCGAAGGGCTTATTATACTCAAAGAAAAAGAATCAGCCATGACAAGTTACAAAAGACTCAGGTTGGATGCTGCTGCTGCTAGAGCAGAATTGACTGCTGCAACTGAAACAGACGATAGCGAAGAGGTTGA GGTTCTGCGGAAAGAAGCTGAAGCTGCAGAATCTAAAGCAATGGAACTAAAAACATGCTATGACCTTGAACTGGACGACAACGAAATCATGTTTCAGCCTGTAGTCCCTATAGTATTCATAACCAATTCAACAGGGCAGCACTTGCTAGAAATTGCGTCTTCT TTCGGTCTATCCCCCTAGAAGCAAACTTCGACAGTACTT GCAT GCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACAGCCAAGTGTATAACATCCATTTTGCGTACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATT CTTTTGTTGTTGTGGTAATTTTGGTTGAGCTACAGTAAATGCCATTCATCCGAATGTAATCAGTATAAGTTATCCATGAAATAAACTCTCTTCT ] [-] EMBL CB647964 [ AAGGGCTTATTATACTCAAAGAAAAAGAATCAGCCATGACAAGTTACAAAAGACTCAGGTTGGATGCTGCTGCTGCTAGAGCAGAATTGACTGCTGCAACTGAAACAGACGATAGCGAAGAGGTTGA GGTTCTGCGGAAAGAAGCTGAAGCTGCAGAATCTAAAGCAATGGAACTAAAAACATGCTATGACCTTGAACTGGACGACAACGAAATCATGTTTCAGCCTGTAGTCCCTATAGTATTCATAACCAATTCAACAGGGCAGCACTTGCTAGAAATTGCGTCTTCT TTCGGTCTATCCCCCTAGAAGCAAACTTCGACAGTACTT GCAT GCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACAGCCAAGTGTATAACATCCATTTTGCGTACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATT CTTTTGTTGTTGTGGTAATTTTGGTTGAGCTACAGTAAATGCCATTCATCCGAATGTAATCAGTATAAGTTAGCCATGAAATAAAC ] [+] EMBL BM419229 [ tTTGAGGGTTCTCCGGAAAGAAGCTGAAGCTGCAGAATCTAAAGCAATGGAACTAAAGACATGCTATGACCTTGAACTGGACGACAACAAAATCATGTTTCAGCCTGTAGTCCCTATAGTATTCATAACCAATTCAACAGGGCAGCACTTGCTAGAAATTGCGTCTTCTGTTCGGTCTATCCCCCTAGAAGCAAACTTCGACAGTACTTGGCATGGCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACA CCAAGTGTATAACATCCA TTTGCATACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATT CTTTTGTTGTTGTGGTAATTTT GTTGAGC CCNTAAATCCCATTCATCCGAATGTAAaaaaaa ] [+] EMBL CA764585 [ gggCTNGAAGCAAACTTCGACAGTACTTGGCAT GCCACCATGCTTGTTACAGTTTGTAGAGTTTTGCCAGCGACAGCTGCCTATTGAAGGGAACATCTGTGCTGCAATCAAAGCTTATCTCCAGATATACATGTCTTCCTCATTGTTCCTCCTTACCTCCTAGCATTTGGGATCTACTCTAAATCGAGGAGAGGTTCCTAGGGGACAGCCAAGTGTATAACATCCATTTTGCATACTCAAACTCTTCAGGGAGTTTGTCTCCCCCTCATTTTTGTGTACATTAAGACTGTAATTCC TTTGTTGTTGTGGTAATTTTGGTTGAGCTACAGTAAATGCCATTCATCCGAATGTAATCAGTATAAGTTATCCATGAAATAAACTCTCTTCTGCATTGCACAACTAGTCACATCGAGTCATCGAGTATGTGTTGAAAGTTAGTCCTAGCTAAGAACTGTTTTATAGAGTTGTTGCTTCAGCATGAAGAAGCTGTGAACCTCACAGGCCGTTGTGAAATCTATCCTACTCTCTACCTGCCAAATATAATCACCAAAAGGGAGTGACAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||