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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10936#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1396 fasta sequence
[TCCCACCACCATGGCTGCTGCACCTGCACGGCTCGTCGTCCTTGTCCTCGTGGCGGTCGTCGTCGTCGTCGGCGGCGACGGCGACGCCGGCGTCATCCGGCAGGTGACGGACGGCGGGTACTGGCCGCCGGGGCTGCTCCCGGAGGCCCAGTTCGCGGCGTTCGTGCGGCGGCACGGGCGGGAGTACTCCGGGCCGGAGGAGTACGCGCGGCGGCTGCGCGTGTTCGCCGCCAACCTCGCCCGCGCCGCGGCGCACCAGGCGCTCGACCCGACCGCGCGCCACGGCGTCACCCCGTTCTCCGACCTCACCCGGGAGGAGTTCGAGGCGCGCTTGACGGGCCTCGCCGCCGACGTTGGCGACGACGTCCGGAGGCGGCCGATGCCGTCCGCCGCGCCGGCCACGGAGGAGGAGGTGTCCGGCCTCCCCGCCAGCTTCGACTGGCGTGACAGGGGCGCCGTGACCGACGTCAAGATGCAGGGCGCGTGCGGCTCCTGCTGGGCCTTCAGCACCACCGGCGCCGTCGAGGGCGCCAACTTCCTCGCCACCGGCAACCTCCTCGACCTCAGCGAGCAGCAGCTCGTCGACTGCGACCACACGTGCGACGCGGAGAAGAAGACGGAGTGCGACAGCGGGTGCGGCGGCGGGCTGATGACGAACGCCTACGCCTACCTGATGAGCTCGGGGGGGCTGATGGAGCAGAGCGCGTACCCATACACGGGCGCGCAGGGGACGTGCCGGTTCGACGCCAACCGGGTCGCCGTCCGCGTCGCCAACTTCACCGTCGTCGCGCCGCCGGGCGGCAACGACGGCGACGGCGACGCGCAGATGCGGGCGGCGCTGGTGCGGCACGGCCCGCTAGCCGTGGGTCTGAACGCGGCGTACATGCAGACGTACGTGGGCGGGGTGTCGTGCCCGCTGGTGTGCCCGCGCGCGTGGGTGAACCACGGCGTGCTCCTCGTCGGCTACGGCGAGCGTGGGTTCGCGGCGCTGCGGCTGGGCCACCGCCCCTACTGGATCATCAAGAACTCGTGGGGGAAGGCGTGGGGGGAGCAGGGCTACTACCGGCTCTGCCGCGGCCGCAACGTCTGCGG-CGTCGACACCATGGTCTCCGCCGTCGCTGTCGCCCCGCCGCCG-CCGTGATCGATTGATCGATATCGATCGG-CCGCCGGCGATCTCACGTTACCGATGTGTTATGTGAAGTACGGAGTACTACTGTATACTGGATGTGCTTGATTAAAGCTTTGCTTGGTTAGCGGTGGGAGACGTGGCGGTAGTAGGTGCTTAGTACTACGTTTTACAAATGGTTTTACATAGTTGGGTTGTATGTCGATCTACTACTAGTGAATACAGAATAACAAAAAGTTATGGACGTGTACATTAAGCTAGGGTATATTG]
[+] EMBL AK063422 [TCCCACCACCATGGCTGCTGCACCTGCACGGCTCGTCGTCCTTGTCCTCGTGGCGGTCGTCGTCGTCGTCGGCGGCGACGGCGACGCCGGCGTCATCCGGCAGGTGACGGACGGCGGGTACTGGCCGCCGGGGCTGCTCCCGGAGGCCCAGTTCGCGGCGTTCGTGCGGCGGCACGGGCGGGAGTACTCCGGGCCGGAGGAGTACGCGCGGCGGCTGCGCGTGTTCGCCGCCAACCTCGCCCGCGCCGCGGCGCACCAGGCGCTCGACCCGACCGCGCGCCACGGCGTCACCCCGTTCTCCGACCTCACCCGGGAGGAGTTCGAGGCGCGCTTGACGGGCCTCGCCGCCGACGTTGGCGACGACGTCCGGAGGCGGCCGATGCCGTCCGCCGCGCCGGCCACGGAGGAGGAGGTGTCCGGCCTCCCCGCCAGCTTCGACTGGCGTGACAGGGGCGCCGTGACCGACGTCAAGATGCAGGGCGCGTGCGGCTCCTGCTGGGCCTTCAGCACCACCGGCGCCGTCGAGGGCGCCAACTTCCTCGCCACCGGCAACCTCCTCGACCTCAGCGAGCAGCAGCTCGTCGACTGCGACCACACGTGCGACGCGGAGAAGAAGACGGAGTGCGACAGCGGGTGCGGCGGCGGGCTGATGACGAACGCCTACGCCTACCTGATGAGCTCGGGGGGGCTGATGGAGCAGAGCGCGTACCCATACACGGGCGCGCAGGGGACGTGCCGGTTCGACGCCAACCGGGTCGCCGTCCGCGTCGCCAACTTCACCGTCGTCGCGCCGCCGGGCGGCAACGACGGCGACGGCGACGCGCAGATGCGGGCGGCGCTGGTGCGGCACGGCCCGCTAGCCGTGGGTCTGAACGCGGCGTACATGCAGACGTACGTGGGCGGGGTGTCGTGCCCGCTGGTGTGCCCGCGCGCGTGGGTGAACCACGGCGTGCTCCTCGTCGGCTACGGCGAGCGTGGGTTCGCGGCGCTGCGGCTGGGCCACCGCCCCTACTGGATCATCAAGAACTCGTGGGGGAAGGCGTGGGGGGAGCAGGGCTACTACCGGCTCTGCCGCGGCCGCAACGTCTGCGG CGTCGACACCATGGTCTCCGCCGTCGCTGTCGCCCCGCCGCCG CCGTGATCGATTGATCGATATCGATCGG CCGCCGGCGATCTCACGTTACCGATGTGTTATGTGAAGTACGGAGTACTACTGTATACTGGATGTGCTTGATTAAAGCTTTGCTTGGTTAGCGGTGGGAGACGTGGCGGTAGTAGGTGCTTAGTACTACGTTTTACAAATGGTTTTACATAGTTGGGTTGTATGTCGATCTACTACTAGTGAATACAGAATAACAAAAAGTTATGGACGTGTACATTAAGCTAGGGTATATTG]
[-] EMBL AU176463 [ CGTCGCCAACTTCACCGTCGTCGCGCCGCCGGGCGGCAACGACGGCGACGGCGACGCGCAGATGCGGGCGGCGCTGGTGCGGCACGGCCCGCTAGCCGTGGGTCTGAACGCGGCGTACATGCAGACGTACGTGGGCGGGGTGTCGTGCCCGCTGGTGTGCCCGCGCGCGTGGGTGAACCACGGCGTGCTCCTCGTCGGCTACGGCGAGCGTGGGTTCGCGGCGCTGCGGCTGGGCCACCGCCCCTACTGGATCATCAAGAACTCGTGGGGGAAGGCGTGGG ]
[+] EMBL C99426 [ CGAAACGTNT CGGCCGTCGACACCATGGTCTCCGCCCAGNGTGTCGCCCCGCCGCCGCCCGTGATCGATTGATCGATATCGATCGGCCCGCCGGCGANCTCACGTTACCGATGTGTTATGTGAAGTACGGAGTACTACTGTATACTGGATGTGCNTGANTAAAGCTTTGCTTGGTTANCGGTGGGANACGTGGCGGTAGTAGGTGCTTAGTACTACGTTTTANAAATGGTTTTACATAGTTGGGTTGTATGTCGATCTACTACTAGTGAATACAGAATTANAAAAAGTTATGGACGTttnaaaa ]
consensusID : consensus_10936#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 631 fasta sequence
[TTCGAGGGGCCAATTTCTTTCTGCCACCGGGCAACCGTCTCTGCGACCTCAGCGAGCAGCAGCATCGTCGGCTGCGACCACACGTGCGACCGCGGAGAAGAAGACGGAGGTGCCGGACAGCGGGGGTGGCGGCGGCGGGGCGTGATGACAGAACGCCTACGCCGTACCCTGATGGAGCTCGGGGAGGACCAAGGATGGAGACAGAGGCGCGGTGACCCGGTACACGGCAGCAGACAGGGGTTCCCGGGTTCAGACAGCACAAACCCAGGGGTCGCCTCGTCCAGCGTCAGCCAAGTTCAACCGTCGTCGCAGCCGGACAGGACCGGACCGGGCAGCCAACTGTACGGGCAGACGCCGCAGATGCAGGCAGGCAGCTGGTCGCGGGCACAGGCCCAGCATCAGCCAGTGGGGCTGAACAGCGGCAGTACTGCAGACAGTACAGTGGGCAGGGATTTTCAGTGCACACGCATGGTGTGCACACAGCAGCGCGTGGGTGAACCACGGCGTGCTCCTCGTCGGCTACAGGCGAGCGCAGGGTTCGCAGGCAGCTGCGGCTGGGCACACCAGCCCCTACTGGATCATCAAGAACTCGTGGGGGAAGGCGTGGGGGGAGCAGGGCTACTACCAGGCT]
[+] EMBL BI808154 [TTCGAGGGGCCAATTTCTTTCTGCCACCGGGCAACCGTCTCTGCGACCTCAGCGAGCAGCAGCATCGTCGGCTGCGACCACACGTGCGACCGCGGAGAAGAAGACGGAGGTGCCGGACAGCGGGGGTGGCGGCGGCGGGGCGTGATGACAGAACGCCTACGCCGTACCCTGATGGAGCTCGGGGAGGACCAAGGATGGAGACAGAGGCGCGGTGACCCGGTACACGGCAGCAGACAGGGGTTCCCGGGTTCAGACAGCACAAACCCAGGGGTCGCCTCGTCCAGCGTCAGCCAAGTTCAACCGTCGTCGCAGCCGGACAGGACCGGACCGGGCAGCCAACTGTACGGGCAGACGCCGCAGATGCAGGCAGGCAGCTGGTCGCGGGCACAGGCCCAGCATCAGCCAGTGGGGCTGAACAGCGGCAGTACTGCAGACAGTACAGTGGGCAGGGATTTTCAGTGCACACGCATGGTGTGCACACAGCAGCGCGTGGGTGAACCACGGCGTGCTCCTCGTCGGCTACAGGCGAGCGCAGGGTTCGCAGGCAGCTGCGGCTGGGCACACCAGCCCCTACTGGATCATCAAGAACTCGTGGGGGAAGGCGTGGGGGGAGCAGGGCTACTACCAGGCT]
consensusID : consensus_10936#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 589 fasta sequence
[GNGCCGCCGTTNCGGGGGTGAANCGGAAAAGGNNANGAAGTGGGGGGTTNTNCCCGAGGGGCCGGGGGCGTGGGGACCAGGGGGTTCTTGTNGGTTACGGNGAGGCGGTTTCGGGGGCTGGGGNTGGGCCNCGNCCCCTANGGATCNTCCAAGAATTCGTGGGGAAGGCGTGGGGGGAGCAGGGNTANTACNGGNTNTGCNGCGGCCGCAACGTCTGCGGGTTGACACCATGNTTTTCGCCCGTCGCCGTCGCTCCGCCATGATCGATCGGCCGCGCCGGCGATCTCACGTTACCGATGTGTCATGTGAAGTACTCGTACTGGATGTGCTTGCTTGGTTAGCGGTGGGAGACGTGGCGGTAGTAGGTGCTTAGTACGTGTTACAAATGGTTTAACATAGTTGGGTTGTATGTCGATCTCCTACAGAATAACAAAAAGTTATGGACGTGTACAGATTAAGCTAGGGTATATTGAAGTCATCTTCAAGGGCTTTATTATTAAACCAACGCCCAATTGTGTTGTTCTATCAACTGTCAAGCACTCATCGAGTTCGCAATAGATTTTAAACATTGCTACCAAAAAAAAAAAAA]
[-] EMBL AA753444 [GNGCCGCCGTTNCGGGGGTGAANCGGAAAAGGNNANGAAGTGGGGGGTTNTNCCCGAGGGGCCGGGGGCGTGGGGACCAGGGGGTTCTTGTNGGTTACGGNGAGGCGGTTTCGGGGGCTGGGGNTGGGCCNCGNCCCCTANGGATCNTCCAAGAATTCGTGGGGAAGGCGTGGGGGGAGCAGGGNTANTACNGGNTNTGCNGCGGCCGCAACGTCTGCGGGTTGACACCATGNTTTTCGCCCGTCGCCGTCGCTCCGCCATGATCGATCGGCCGCGCCGGCGATCTCACGTTACCGATGTGTCATGTGAAGTACTCGTACTGGATGTGCTTGCTTGGTTAGCGGTGGGAGACGTGGCGGTAGTAGGTGCTTAGTACGTGTTACAAATGGTTTAACATAGTTGGGTTGTATGTCGATCTCCTACAGAATAACAAAAAGTTATGGACGTGTACAGATTAAGCTAGGGTATATTGAAGTCATCTTCAAGGGCTTTATTATTAAACCAACGCCCAATTGTGTTGTTCTATCAACTGTCAAGCACTCATCGAGTTCGCAATAGATTTTAAACATTGCTACCAAAAAAAAAAAAA]
consensusID : consensus_10936#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 560 fasta sequence
[CGCCGCCAACCTCGCCCGCGCCGCGGCGCACCAGGCGCTCGACCCGACCGCGCGCCACGGCGTCACCCCGTTCTCCGACCTCACCCGGGAGGAGTCCGAGGCGCGCTTGACGGGCCTCGCCGCCGACGTCGGCGACGACGTCCGGAGGCGGCCGATGCCGTCCGCCGCGCCGGCCACGGAGGAGGAGGTGTCCGGCCTCCCCGCCAGCTTACGACTGGCGTGACAGGGGGCGCCGTGACCGACGTCAAGATGCAGCGGCGCGTGCGGCTCCTGCTGGTGCCTACAGCACCACCGGCGCCGTACACGGCGCCAACTTCCTCGCCACCGGCAACCTCCTCGACCTCAGCGAGCAACAGCTCGTCGACTGCGACCACACTTGCCACCCGGAAAAGACACGAATGCCACACCGGTGCCGCGCCGGCGATGACCACGCCTACCCTACTATGACTCGGGGGGCCTATGAACAACCCTTACCATACCGGCCCCCAGGACTTCCGTCGACCCCACGGTTCCTTCCCTTCCAATCACCTGTCCCCCGGCGAAAAAGNATCAACCAATCG]
[+] EMBL BQ164725 [CGCCGCCAACCTCGCCCGCGCCGCGGCGCACCAGGCGCTCGACCCGACCGCGCGCCACGGCGTCACCCCGTTCTCCGACCTCACCCGGGAGGAGTCCGAGGCGCGCTTGACGGGCCTCGCCGCCGACGTCGGCGACGACGTCCGGAGGCGGCCGATGCCGTCCGCCGCGCCGGCCACGGAGGAGGAGGTGTCCGGCCTCCCCGCCAGCTTACGACTGGCGTGACAGGGGGCGCCGTGACCGACGTCAAGATGCAGCGGCGCGTGCGGCTCCTGCTGGTGCCTACAGCACCACCGGCGCCGTACACGGCGCCAACTTCCTCGCCACCGGCAACCTCCTCGACCTCAGCGAGCAACAGCTCGTCGACTGCGACCACACTTGCCACCCGGAAAAGACACGAATGCCACACCGGTGCCGCGCCGGCGATGACCACGCCTACCCTACTATGACTCGGGGGGCCTATGAACAACCCTTACCATACCGGCCCCCAGGACTTCCGTCGACCCCACGGTTCCTTCCCTTCCAATCACCTGTCCCCCGGCGAAAAAGNATCAACCAATCG]
consensusID : consensus_10936#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 491 fasta sequence
[GGNAATGCCNCCGGGTGTTCCGGAGGNCAANTGCGGGTTNANGGGGGGCACGGGGGGGAGTAATTCGGGCCGGNGGATACGCGCGGCGGATGCGAGGTTNACNGCNAACTTNGCCNGGGCGGCGGGGCACCAGGGCGNTTGACCCCACCGGGGGCCAGGGGTCACCCCCTTGTCCGACNTCACCCGGGAGGAGTTCGAGGCGCGCTNGACGGGCCTCGCCACCGTCGNTCCGCCATGATCGATCGGCCGCGCCGGCGATCTCACGTTACCGATGTGTCATGTGAAGTACTCGTACTGGATGTGCTTGCTTGGTTAGCGGTGGGAGACGTGGCGGTAGTAGGTGCTTAGTACGTGTTACAAATGGTTTTACATAGTTGGGTTGTATGTCGATCTCCTACAGAATAACAAAAAGTTATGGACGTGTACAGATTAAGCTAGGGTATATTGAAGTCATCTTCAAGGGCTTTATTATTAAACCAAAAAAAAAAAAA]
[-] EMBL AA752148 [GGNAATGCCNCCGGGTGTTCCGGAGGNCAANTGCGGGTTNANGGGGGGCACGGGGGGGAGTAATTCGGGCCGGNGGATACGCGCGGCGGATGCGAGGTTNACNGCNAACTTNGCCNGGGCGGCGGGGCACCAGGGCGNTTGACCCCACCGGGGGCCAGGGGTCACCCCCTTGTCCGACNTCACCCGGGAGGAGTTCGAGGCGCGCTNGACGGGCCTCGCCACCGTCGNTCCGCCATGATCGATCGGCCGCGCCGGCGATCTCACGTTACCGATGTGTCATGTGAAGTACTCGTACTGGATGTGCTTGCTTGGTTAGCGGTGGGAGACGTGGCGGTAGTAGGTGCTTAGTACGTGTTACAAATGGTTTTACATAGTTGGGTTGTATGTCGATCTCCTACAGAATAACAAAAAGTTATGGACGTGTACAGATTAAGCTAGGGTATATTGAAGTCATCTTCAAGGGCTTTATTATTAAACCAAAAAAAAAAAAA]
consensusID : consensus_10936#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 366 fasta sequence
[TGGAGCTCCACGCGNTGNCGGCCGCAACNTCTGCGCCGTCGACACATGGTCCCGCCANCCTGCGCCCCCCGCCGCCGTGATCGATTGATCGATATCGATCGGCCGCCGGCGATCTCACGTTACCGATGTGTTATGTGAAGTACGGAGTACTACTGTATACTGGATGTGCTTGATTAAACTTTGCTTGGTTANCGGTGGGAGACGTGGCGGTAGTAGGTGCTTAGTACTACGTTTTACAAATGGTTTTACATAGTTGGGTTGTATGTCGATCTACTACTAGTGAATACAGAATAACAAAAAGTTATGGACGTGTACATTAAGCTAGGGTATATTGAAGTCATCTTCAAGGGCTTTATTATTAAAAAA]
[+] EMBL C99418 [TGGAGCTCCACGCGNTGNCGGCCGCAACNTCTGCGCCGTCGACACATGGTCCCGCCANCCTGCGCCCCCCGCCGCCGTGATCGATTGATCGATATCGATCGGCCGCCGGCGATCTCACGTTACCGATGTGTTATGTGAAGTACGGAGTACTACTGTATACTGGATGTGCTTGATTAAACTTTGCTTGGTTANCGGTGGGAGACGTGGCGGTAGTAGGTGCTTAGTACTACGTTTTACAAATGGTTTTACATAGTTGGGTTGTATGTCGATCTACTACTAGTGAATACAGAATAACAAAAAGTTATGGACGTGTACATTAAGCTAGGGTATATTGAAGTCATCTTCAAGGGCTTTATTATTAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10936#0 TCCCACCACCATGGCTGCTGCACCTGCACGGCTCGTCGTCCTTGTCCTCGTGGCGGTCGT 60
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 CGTCGTCGTCGGCGGCGACGGCGACGCCGGCGTCATCCGGCAGGTGACGGACGGCGGGTA 120
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 CTGGCCGCCGGGGCTGCTCCCGGAGGCCCAGTTCGCGGCGTTCGTGCGGCGGCACGGGCG 180
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 GGAGTACTCCGGGCCGGAGGAGTACGCGCGGCGGCTGCGCGTGTTCGCCGCCAACCTCGC 240
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 CCGCGCCGCGGCGCACCAGGCGCTCGACCCGACCGCGCGCCACGGCGTCACCCCGTTCTC 300
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 CGACCTCACCCGGGAGGAGTTCGAGGCGCGCTTGACGGGCCTCGCCGCCGACGTTGGCGA 360
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 CGACGTCCGGAGGCGGCCGATGCCGTCCGCCGCGCCGGCCACGGAGGAGGAGGTGTCCGG 420
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 CCTCCCCGCCAGCTTCGACTGGCGTGACAGGGGCGCCGTGACCGACGTCAAGATGCAGGG 480
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 CGCGTGCGGCTCCTGCTGGGCCTTCAGCACCACCGGCGCCGTCGAGGGCGCCAACTTCCT 540
consensus_10936#1 ----------------------------------------TTCGAGGG-GCCAATTTCTT 19
consensus_10936#3 ---------------------------------------------CGCCGCCAACCTCGC 15
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 C---GCCACCGG-CAACCTCCTC---GACCTCA--GCGAGCAGCAGC-TCGTCGA---CT 587
consensus_10936#1 TC-TGCCACCGGGCAACCGTCTCTGCGACCTCA--GCGAGCAGCAGCATCGTCGG---CT 73
consensus_10936#3 CCGCGCCGCGGCGCACCAGGCGCT-CGACCCGACCGCGCGCCACGGCGTCACCCCGTTCT 74
consensus_10936#2 -------------------------------------GNGCCGCCGTTNCGGGGGTGAAN 23
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 GCGACCACACGTGCGAC-GCGGAGAAGAAGACGGAG-TGC--GACAGCGGGTGCGGCGGC 643
consensus_10936#1 GCGACCACACGTGCGACCGCGGAGAAGAAGACGGAGGTGCCGGACAGCGGGGGTGGCGGC 133
consensus_10936#3 CCGACCTCACCCGGGA----GGAGTCCGAGGCGCGCTTGACGGGCCTCGCCGCCGACGTC 130
consensus_10936#2 CGGAAAAGGNNANGAAGTGGGGGGTTNTNCCCGAGGGGCCGGGGGCGTGGGGACCAGGGG 83
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 --GGNAATGCCNCCGGGTGTTCCGGAGGNCAANTGCGGGTTNANGGG-GGGCACGGGGGG 57
consensus_10936#0 GG----GC-TGATGAC-GAACGCCTACGCC-TACC-TGATG-AGCTCGGGGGGGCT---- 690
consensus_10936#1 GGCGGGGCGTGATGACAGAACGCCTACGCCGTACCCTGATGGAGCTCGGGGAGGACCAAG 193
consensus_10936#3 GGCGACGA-CGTCCGGAGGCGGCCGATGCCGT-CCGCCGCGCCGGCCACGGAGGAG---- 184
consensus_10936#2 GTTCTTGTNGGTTACGGNGAGGCGGTTTCGGGGGCTGGGGNTGGGCCNCGNCCCCTANGG 143
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 GAGTAATTCGGGCCGGNGGATACGCGCGGCGGATGCGAGGTTNACNGCNAACTTNGCCNG 117
consensus_10936#0 GATGGAG-CAGAG-CGCGT--ACCCA-TACACGGGCGCGCAGGGGACGTGCCGGTT---- 741
consensus_10936#1 GATGGAGACAGAGGCGCGGTGACCCGGTACACGGCAGCAGACAGGGGTTCCCGGGTTCAG 253
consensus_10936#3 GAGGTGTCCGGCCTCCCCGCCAGCTTACGACTGGCGT--GACAGGGGGCGCCGTGAC--- 239
consensus_10936#2 ATCNTCCAAGAATTCGTGGGGAAGGCGTGGGGGGA-GCAGGGNTANTACNGGNTNTGC-N 201
consensus_10936#5 ---------------------------TGGAGCTCCACGCGNTGNCGGCCGCAACNTC-T 32
consensus_10936#4 GGCGGCGGGGCACCAGGGCGNTTGACCCCACCGGGGGCCAGGGGTCACCCCCTTGTCC-G 176
consensus_10936#0 -CGACGCCAACC---GGGTCGCC--GTCC-GCGTC-GCCAACTTCA-C--CG--TCGTCG 788
consensus_10936#1 ACAGCACAAACCCAGGGGTCGCCTCGTCCAGCGTCAGCCAAGTTCAAC--CG--TCGTCG 309
consensus_10936#3 -CGACGTCAAGAT--GCAGCGGCGCGTGCGGCTCCTGCTGGTGCCTACAGCA--CCACCG 294
consensus_10936#2 GCGGCCGCAACGTCTGCGGGTTGACACCATGNTTTTCGC-CCGTCGCCGTCGCTCCGCCA 260
consensus_10936#5 GCGCCGTCGACACATG-GTCCCGCCANCCTGCGCCCCCCGCCGCCGTGATCGATTGATCG 91
consensus_10936#4 ACNTCACCCGGGAGGAGTTCGAGGCGCGCTNGACGGGCC-TCGCCACCGTCGNTCCGCCA 235
* * * * *
consensus_10936#0 C-GCCG-------CCGGGC--GGCAAC-GACGGCGACGGC-GACGC-GCAGATGCGGGCG 835
consensus_10936#1 CAGCCGGACAGGACCGGACCGGGCAGCCAACTGTACGGGCAGACGCCGCAGATGCAGGCA 369
consensus_10936#3 GCGCCGTACA----CGGCGCCAACTTC-CTCGCCACCGGC-AACCTCCTCGACCTCAGCG 348
consensus_10936#2 TGATCGATCGG--CCGCGCCGGCGATCTCACGTTACCGATGTGTCATGTGAAGTACT--- 315
consensus_10936#5 ATATCGATCGG--CCGC--CGGCGATCTCACGTTACCGATGTGTTATGTGAAGTACGGAG 147
consensus_10936#4 TGATCGATCGG--CCGCGCCGGCGATCTCACGTTACCGATGTGTCATGTGAAGTACT--- 290
** ** * * * *
consensus_10936#0 GC--GCTGGT-GCGG-CACGGCCC------------GCTAGCC-GTGGGTCTGAAC-GCG 877
consensus_10936#1 GGCAGCTGGTCGCGGGCACAGGCCCA--------GCATCAGCCAGTGGGGCTGAACAGCG 421
consensus_10936#3 AGCAACAGCTCGTCGACTGCGACC----------ACACTTGCCACCCGGAAAAGAC-ACG 397
consensus_10936#2 --------CGTACTGGATGTGCTTG-----------CTTGGTTAGCGGTGGGAGAC-GTG 355
consensus_10936#5 TACTACTGTATACTGGATGTGCTTGATTAAACTTTGCTTGGTTANCGGTGGGAGAC-GTG 206
consensus_10936#4 --------CGTACTGGATGTGCTTG-----------CTTGGTTAGCGGTGGGAGAC-GTG 330
* * * * ** *
consensus_10936#0 GCGTACAT--GCAGAC-GTAC-GTGGGCGGGGTGTC---GTGCCCGC---TGGTGTGCCC 927
consensus_10936#1 GCAGTACT--GCAGACAGTACAGTGGGCAGGGATTTTCAGTGCACACGCATGGTGTGCAC 479
consensus_10936#3 --AATGCC--ACAC-CGGTGC--CGCGCCGGCGATGACCACGCCTAC-CCTACTATGACT 449
consensus_10936#2 GCGGTAGTAGGTGCTTAGTAC---GTGTTACAAATGGTTTAACATAGTTGGGTTGTATGT 412
consensus_10936#5 GCGGTAGTAGGTGCTTAGTACTACGTTTTACAAATGGTTTTACATAGTTGGGTTGTATGT 266
consensus_10936#4 GCGGTAGTAGGTGCTTAGTAC---GTGTTACAAATGGTTTTACATAGTTGGGTTGTATGT 387
** * * * * * *
consensus_10936#0 GC----GCGCGT---GGGTGAACCACGGCGTGCT--CCTCGTCGGCTAC-GGCGAGCGT- 976
consensus_10936#1 ACAGCAGCGCGT---GGGTGAACCACGGCGTGCT--CCTCGTCGGCTACAGGCGAGCGCA 534
consensus_10936#3 CGGGGGGCCTAT---GAACAACCCTTACCATACCGGCCCCCAGGACTTCCGTCGACCCCA 506
consensus_10936#2 CGATCTCCTAC----------AGAATAACAAAAAGTTATGGACGTGTACAGATTAAGCTA 462
consensus_10936#5 CGATCTACTACTAGTGAATACAGAATAACAAAAAGTTATGGACGTGTACA--TTAAGCTA 324
consensus_10936#4 CGATCTCCTAC----------AGAATAACAAAAAGTTATGGACGTGTACAGATTAAGCTA 437
* * * * * *
consensus_10936#0 GGGTTCGCGGC--GCTGCGGCTGGGC-CACC-G-CCCCTACTGGATCATCAAGAACTCGT 1031
consensus_10936#1 GGGTTCGCAGGCAGCTGCGGCTGGGCACACCAG-CCCCTACTGGATCATCAAGAACTCGT 593
consensus_10936#3 CGGTTC--------CTTCCCTTCCAATCACCTGTCCCCCGGCGAAAAAGNATCAACCAAT 558
consensus_10936#2 GGGTATA-------TTGAAGTCATCTTCAAGGG--CTTTATTATTAAACCAACGCCCAAT 513
consensus_10936#5 GGGTATA-------TTGAAGTCATCTTCAAGGG--CTTTATTATTAAAAAA--------- 366
consensus_10936#4 GGGTATA-------TTGAAGTCATCTTCAAGGG--CTTTATTATTAAACCAAAAAAAAAA 488
*** * ** * * * *
consensus_10936#0 GGGGGAAGGCGTGGGGGGAGCAGGGCTACTACCGGCTCTGCCGCGGCCGCAACGTCTGCG 1091
consensus_10936#1 GGGGGAAGGCGTGGGGGGAGCAGGGCTACTACCAGGCT---------------------- 631
consensus_10936#3 CG---------------------------------------------------------- 560
consensus_10936#2 TGTGTTGTTCTATCAACTGTCAAGCACTCATCGAGTTCGCAATAGATTTTAAACATTGCT 573
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 AAA--------------------------------------------------------- 491
consensus_10936#0 GCGTCGACACCATGGTCTCCGCCGTCGCTGTCGCCCCGCCGCCGCCGTGATCGATTGATC 1151
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ACCAAAAAAAAAAAAA-------------------------------------------- 589
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 GATATCGATCGGCCGCCGGCGATCTCACGTTACCGATGTGTTATGTGAAGTACGGAGTAC 1211
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 TACTGTATACTGGATGTGCTTGATTAAAGCTTTGCTTGGTTAGCGGTGGGAGACGTGGCG 1271
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 GTAGTAGGTGCTTAGTACTACGTTTTACAAATGGTTTTACATAGTTGGGTTGTATGTCGA 1331
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 TCTACTACTAGTGAATACAGAATAACAAAAAGTTATGGACGTGTACATTAAGCTAGGGTA 1391
consensus_10936#1 ------------------------------------------------------------
consensus_10936#3 ------------------------------------------------------------
consensus_10936#2 ------------------------------------------------------------
consensus_10936#5 ------------------------------------------------------------
consensus_10936#4 ------------------------------------------------------------
consensus_10936#0 TATTG 1396
consensus_10936#1 -----
consensus_10936#3 -----
consensus_10936#2 -----
consensus_10936#5 -----
consensus_10936#4 -----
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||