cluster # 10938

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10938 cluster # 10938 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10938#0 length = 1502 sequences # 4

consensus_10938#1 length = 1110 sequences # 3
consensus_10938#2 length = 827 sequences # 1

consensusID : consensus_10938#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1502
fasta sequence

                              [ATACAACCATCTGCTATAGCCAAGCTAATTAATTAACCTAAGCTAGTAATTAATCTGAAGCTTGGGTAAGCTAGGCCATGGCGGTGGCGGTGGAGATCACACGGAGCGAGGTGCTCAGGCCGTCGGAGGCGTCGGCCGCCGGCGGCGGCGGCGGCAAGAGGAGCCCGCTCACCGTGTTCGACCGTGCGGCCACGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACGGCGCCGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCTGGCCAGGTACCCGCACCTCGCCGGGCGGTTCGACGTCGACGAGCGTGGCCGGAGGTGCTTCAACCTCAACGACGCCGGTGTGAGGGTCCTCGAGGCCACCGTCGCCGCCGACCTCGCCGACGCCCTCGCGCACGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGAGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCTCCCGACGCCGTTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGCCCGCCGGCGCCGGCGTTCGACCACCGGAACATCGAGTTCAAGGGCGAGAACAGCTGGACCCACTCCTACGGCTCCCTCCCCCTGGAGAGGATCAGGAACCTCGCCGTCCACTTCCCGGACGAGTTCGTCGCCGGCCTCAAGTCCCACGTCGGCACGCGGTGCAGCACGTTCCAGTGCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTTTCGCCGGAGGAGTACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGGACTACTTTGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCTCCGCCAGCTACGCCACGGTGGTCGGCGTCATCCGCGAGGCCGTGGCGCGCGTCGACGAGCAGTACATCCAGTCGTTCGTGGACTTCGGGGAGGTGGCCGTCGGCGACGAGCTGACGCCGACAGCGGCGCCGCCGGGCACGGTGTTCTGCCCGGACCTGGAGGTGGACAGCTGGCTAGGGTTCAGGTTCCACGACCTCGACTTCGGCCGTGGCCCGCCGTGCGCGTTCCTGCCGCCGGACCTGCCCGTCGAGGGGATGCTCATCTTCGTGCCGTCGTGCGCGGCGAAGGGCGGCGTCGAGATGTACATGGCGCTCGACGACCTCCACGTCGACGCTTTCAGGCAAATCTGCTACTCCATGGACTGATCACGACTGTCACAAAAATATTACTCCTATGTGTACCATATTGTTAGTTTGTTACAAGTACAACAACAGCGTGCATATTTGCAAGATTATCCAGCTGCCAAAAAAAAAAAAAAAAGA]

[+] EMBL AK060656             [ATACAACCATCTGCTATAGCCAAGCTAATTAATTAACCTAAGCTAGTAATTAATCTGAAGCTTGGGTAAGCTAGGCCATGGCGGTGGCGGTGGAGATCACACGGAGCGAGGTGCTCAGGCCGTCGGAGGCGTCGGCCGCCGGCGGCGGCGGCGGCAAGAGGAGCCCGCTCACCGTGTTCGACCGTGCGGCCACGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACGGCGCCGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCTGGCCAGGTACCCGCACCTCGCCGGGCGGTTCGACGTCGACGAGCGTGGCCGGAGGTGCTTCAACCTCAACGACGCCGGTGTGAGGGTCCTCGAGGCCACCGTCGCCGCCGACCTCGCCGACGCCCTCGCGCACGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGAGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCTCCCGACGCCGTTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGCCCGCCGGCGCCGGCGTTCGACCACCGGAACATCGAGTTCAAGGGCGAGAACAGCTGGACCCACTCCTACGGCTCCCTCCCCCTGGAGAGGATCAGGAACCTCGCCGTCCACTTCCCGGACGAGTTCGTCGCCGGCCTCAAGTCCCACGTCGGCACGCGGTGCAGCACGTTCCAGTGCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGGCCTTTCGCCGGAGGAGTACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGGACTACTTTGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCTCCGCCAGCTACGCCACGGTGGTCGGCGTCATCCGCGAGGCCGTGGCGCGCGTCGACGAGCAGTACATCCAGTCGTTCGTGGACTTCGGGGAGGTGGCCGTCGGCGACGAGCTGACGCCGACAGCGGCGCCGCCGGGCACGGTGTTCTGCCCGGACCTGGAGGTGGACAGCTGGCTAGGGTTCAGGTTCCACGACCTCGACTTCGGCCGTGGCCCGCCGTGCGCGTTCCTGCCGCCGGACCTGCCCGTCGAGGGGATGCTCATCTTCGTGCCGTCGTGCGCGGCGAAGGGCGGCGTCGAGATGTACATGGCGCTCGACGACCTCCACGTCGACGCTTTCAGGCAAATCTGCTACTCCATGGACTGATCACGACTGTCACAAAAATATTACTCCTATGTGTACCATATTGTTAGTTTGTTACAAGTACAACAACAGCGTGCATAT                                       ]
[+] EMBL AU070410             [            GCTATAGCCAAGCTAATTAATTAACCTAAGCTAGTAATTAATCTGAAGCTTGGGTAAGCTAGGCCATGGCGGTGGCGGTGGAGATCACACGGAGCGAGGTGCTCAGGCCGTCGGAGGCGTCGGCCGCCGGCGGCGCGGGCGGCAAGAGGAGCCCGCTCACCGTGTTCGACCGTGCGGCCACGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACNGCGCCGCGGCG CTNCCAACGACGAGGTTAAGGGCGGCCTCGCCGCgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK066965             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCTCCCGACGCCGTTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGCCCGCCGGCGCCGGCGTTCGACCACCGGAACATCGAGTTCAAGGGCGAGAACAGCTGGACCCACTCCTACGGCTCCCTCCCCCTGGAGAGGATCAGGAACCTCGCCGTCCACTTCCCGGACGAGTTCGTCGCCGGCCTCAAGTCCCACGTCGGCACGCGGTGCAGCACGTTCCAGTGCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTTTCGCCGGAGGAGTACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGGACTACTTTGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCTCCGCCAGCTACGCCACGGTGGTCGGCGTCATCCGCGAGGCCGTGGCGCGCGTCGACGAGCAGTACATCCAGTCGTTCGTGGACTTCGGGGAGGTGGCCGTCGGCGACGAGCTGACGCCGACAGCGGCGCCGCCGGGCACGGTGTTCTGCCCGGACCTGGAGGTGGACAGCTGGCTAGGGTTCAGGTTCCACGACCTCGACTTCGGCCGTGGCCCGCCGTGCGCGTTCCTGCCGCCGGACCTGCCCGTCGAGGGGATGCTCATCTTCGTGCCGTCGTGCGCGGCGAAGGGCGGCGTCGAGATGTACATGGCGCTCGACGACCTCCACGTCGACGCTTTCAGGCAAATCTGCTACTCCATGGACTGATCACGACTGTCACAAAAATATTACTCCTATGTGTACCATATTGTTAGTTTGTTACAAGTACAACAACAGCGTGCATAT                                       ]
[-] EMBL CB656437             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCACGCGGTGCAGCACGTTCCAGTGCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTTTCGCCGGAGGAGTACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGGACTACTTTGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCTCCGCCAGTTACGCCACGGTGGTCGGCGTCATCCGCGAGGCCGTGGCGCGCGTCGACGAGCAGTACATCCAGTCGTTCGTGGACTTCGGGGAGGTGGCCGTCGGCGACGAGCTGACGCCGACAGCGGCGCCGCCGGGCACGGTGTTCTGCCCGGACCTGGAGGTGGACAGCTGGCTAGGGTTCAGGTTCCACGACCTCGACTTCGGCCGTGGCCCGCCGTGCGCGTTCCTGCCGCCGGACCTGCCCGTCGAGGGGATGCTCATCTTCGTGCCGTCGTGCGCGGCGAAGGGCGGCGTCGAGATGTACATGGCGCTCGACGACCTCCACGTCGACGCTTTCAGGCAAATCTGCTACTCCATGGACTGATCACGACTGTCACAAAAATATTACTCCTATGTGTACCATATTGTTAGTTTGTTACAAGTACAACAACAGCGTGCATATTTGCAAGATTATCCAGCTGCCAAAAAAAAAAAAAAAAGA]




>consensus_10938#0
ATACAACCATCTGCTATAGCCAAGCTAATTAATTAACCTAAGCTAGTAATTAATCTGAAG
CTTGGGTAAGCTAGGCCATGGCGGTGGCGGTGGAGATCACACGGAGCGAGGTGCTCAGGC
CGTCGGAGGCGTCGGCCGCCGGCGGCGGCGGCGGCAAGAGGAGCCCGCTCACCGTGTTCG
ACCGTGCGGCCACGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACGGCGCCGCGGCGC
CGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCTGGCCAGGTACCCGCACCTCG
CCGGGCGGTTCGACGTCGACGAGCGTGGCCGGAGGTGCTTCAACCTCAACGACGCCGGTG
TGAGGGTCCTCGAGGCCACCGTCGCCGCCGACCTCGCCGACGCCCTCGCGCACGACGTCG
CCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGAGAACGGCGACGAGGCGGTGT
TCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACC
ACCAGGTCTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGC
GCAGCGCCGGCGCGACCCTCCCGACGCCGTTCGTCGACCGCGCCGCCATCGCGGTGCCCC
GCGGCCCGCCGGCGCCGGCGTTCGACCACCGGAACATCGAGTTCAAGGGCGAGAACAGCT
GGACCCACTCCTACGGCTCCCTCCCCCTGGAGAGGATCAGGAACCTCGCCGTCCACTTCC
CGGACGAGTTCGTCGCCGGCCTCAAGTCCCACGTCGGCACGCGGTGCAGCACGTTCCAGT
GCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTTTCGCCGGAGGAGT
ACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGG
ACTACTTTGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCT
CCGCCAGCTACGCCACGGTGGTCGGCGTCATCCGCGAGGCCGTGGCGCGCGTCGACGAGC
AGTACATCCAGTCGTTCGTGGACTTCGGGGAGGTGGCCGTCGGCGACGAGCTGACGCCGA
CAGCGGCGCCGCCGGGCACGGTGTTCTGCCCGGACCTGGAGGTGGACAGCTGGCTAGGGT
TCAGGTTCCACGACCTCGACTTCGGCCGTGGCCCGCCGTGCGCGTTCCTGCCGCCGGACC
TGCCCGTCGAGGGGATGCTCATCTTCGTGCCGTCGTGCGCGGCGAAGGGCGGCGTCGAGA
TGTACATGGCGCTCGACGACCTCCACGTCGACGCTTTCAGGCAAATCTGCTACTCCATGG
ACTGATCACGACTGTCACAAAAATATTACTCCTATGTGTACCATATTGTTAGTTTGTTAC
AAGTACAACAACAGCGTGCATATTTGCAAGATTATCCAGCTGCCAAAAAAAAAAAAAAAA
GA

consensusID : consensus_10938#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1110
fasta sequence

                              [AGCTACTAATTAATCTGAAGCTTGGGTAAGCTAGGCCATGGCGGTGGCGGTGGAGATCACACGGAGCGAGGTGCTCAGGCCGTCGGAGGCGTCAGCCGCCGGCGGCGGCGGCGGCAAGAGGAGCCCGCTCACCGTGTTCGACCGTGCGGCCACGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACGGCGCCGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCTGGCCAGGTACCCGCACCTCGCCGGGCGGTTCGACGTCAACGAGCGTGGCCGGAGGTGCTTCAACCTCAACGACGCCGGTGTGAGGGTCCTCTAGGCCACCGTCGCCGCCGACCTCGCCGACGCCCTCGCGCACGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGTGTATACATAGCTAGATATAGCAACGTGACATGTTCAATTATGGAATTAATTGTACGTGTTTTTTGACACGTGTGTTTTGCATATGTTGCAGGAGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCTCCCGACGCCGTTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGCCCGCCGGCGCCGGCGTTCGACCACCGGAACATCGAGTTCAAGGGCGAGAACAGCTGGACCCACTCCTACGGCTCCCTCCCCCTGGAGAGGATCAGGAACCTCGCCGTCCACTTCCCGGACGAGTTCGTCGCCGGCCTCAAGTCCCACGTCGGCACGCGGTGCAGCACGTTCCAGTGCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTTTCGCCGGAGGAGTACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGGACTACTTTGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCTCCGCCAGCTACGCCACGGTGGTCGGCGTCATCCGCGA]

[+] EMBL CB680463             [AGCTACTAATTAATCTGAAGCTTGGGTAAGCTAGGCCATGGCGGTGGCGGTGGAGATCACACGGAGCGAGGTGCTCAGGCCGTCGGAGGCGTCAGCCGCCGGCGGCGGCGGCGGCAAGAGGAGCCCGCTCACCGTGTTCGACCGTGCGGCCACGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACGGCGCCGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCTGGCCAGGTACCCGCACCTCGCCGGGCGGTTCGACGTCAACGAGCGTGGCCGGAGGTGCTTCAACCTCAACGACGCCGGTGTGAGGGTCCTCTAGGCCACCGTCGCCGCCGACCTCGCCGACGCCCTCGCGCACGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGTGTATACATAGCTAGATATAGCAACGTGACATGTTCAATTATGGAATTAATTGTACGTGTTTTTTGACACGTGTGTTTTGCATATGTTGCAGGAGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCTGCACGGCGTGCAACCACCAAGTCTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCACGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCTCCCGACGCCGTTCTTCTACC                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB656436             [                                                                                                                                                                                                                                                                                                                                                                              CGCGCACGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGTGTATACATAGCTAGATATAGCAACGTGACATGTTCAATTATGGAATTAATTGTACGTGTTTTTTGACACGTGTGTTTTGCATATGTTGCAGGAGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCTCCCGACGCCGTTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGCCCGCCGGCGCCGGCGTTCGACCACCGGAACATCGAGTTCAAGGGCGAGAACAGCTGGACCCACTCCTACGGCTCCCTCCCCCTGGAGAGGATCAGGAACCTCGCCGTCCACTTCCCGGACGAGTTCGTCGCCGGCCTCAAGTCCCACGTCGGCACGCGGTGCAGCACGTTCCAGTGCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTTTCGCCGGAGGAGTACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGGACTACTTTGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCTCCGCCAGCTACGCCACGGTGGTCGGCGTCATCCGCGA]
[+] EMBL CB656438             [                                                                                                                                                                                                                                                                                                                                                                              CGCGCACGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGTGTATACATAGCTAGATATAGCAACGTGACATGTTCAATTATGGAATTAATTGTACGTGTTTTTTGACACGTGTGTTTTGCATATGTTGCAGGAGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCTCCCGACGCCGTTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGCCCGCCGGCGCCGGCGTTCGACCACCGGAACATCGAGTTCAAGGGCGAGAACAGCTGGACCCACTCCTACGGCTCCCTCCCCCTGGAGAGGATCAGGAACCTCGCCGTCCACTTCCCGGACGAGTTCGTCGCCGGCCTCAAGTCCCACGTCGGCACGCGGTGCAGCACGTTCCAGTGCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTTTCGCCGGAGGAGTACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGGACTACTTTGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCTCCGCCAGCTACGCCACGGTGGT               ]




>consensus_10938#1
AGCTACTAATTAATCTGAAGCTTGGGTAAGCTAGGCCATGGCGGTGGCGGTGGAGATCAC
ACGGAGCGAGGTGCTCAGGCCGTCGGAGGCGTCAGCCGCCGGCGGCGGCGGCGGCAAGAG
GAGCCCGCTCACCGTGTTCGACCGTGCGGCCACGGACTGGTACATCCCGGCCGTCTTCGC
GTGGTACGGCGCCGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCT
GGCCAGGTACCCGCACCTCGCCGGGCGGTTCGACGTCAACGAGCGTGGCCGGAGGTGCTT
CAACCTCAACGACGCCGGTGTGAGGGTCCTCTAGGCCACCGTCGCCGCCGACCTCGCCGA
CGCCCTCGCGCACGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGT
GTATACATAGCTAGATATAGCAACGTGACATGTTCAATTATGGAATTAATTGTACGTGTT
TTTTGACACGTGTGTTTTGCATATGTTGCAGGAGAACGGCGACGAGGCGGTGTTCCAGGT
GCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGT
CTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGC
CGGCGCGACCCTCCCGACGCCGTTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGCCC
GCCGGCGCCGGCGTTCGACCACCGGAACATCGAGTTCAAGGGCGAGAACAGCTGGACCCA
CTCCTACGGCTCCCTCCCCCTGGAGAGGATCAGGAACCTCGCCGTCCACTTCCCGGACGA
GTTCGTCGCCGGCCTCAAGTCCCACGTCGGCACGCGGTGCAGCACGTTCCAGTGCCTCCT
GGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTTTCGCCGGAGGAGTACACGCA
GGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGGACTACTT
TGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCTCCGCCAG
CTACGCCACGGTGGTCGGCGTCATCCGCGA

consensusID : consensus_10938#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 827
fasta sequence

                              [ACACAAACACCTAGTAATTAATCAGAAGCTTGGGCAGCTTGGGTAGCAAGGCCATGGCTGTGGCGGTGGAGATCACACGGAGCGAGGTGCTCAGGCCGTCGGAGACGTTGGCGGCCGGCGGCGGCGGCAAGAGGAGCCAGCTCACCGTGTTCGACCGTGCAGCCATGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACGGCGCCGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCTGGCCAGGTACCCGCACCTCGCCGGGCGGTTCGACGTCGACGAGCGTGGCCGGAGGTGCTTCAACCTCAACGACGCCGGTGTGAGGGTCCTCGAGGCCACCGTCGCCGCCGACCTCGCCGACGCCCTCGCGCACGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGAGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCTCCCGACGCCGGTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGGCCGCCGGTGCCGGCGTTCGACCACCGGAACATCGAGGTCTAGGGCGAGAACAGTTGGACCCACTCCTACGGCTTCCTTCCCCCTGGAGAGGATCAGGAACCTTCCCCGTCTCTTTCCCGGACGAATTTCGTCCCCGGGGCTCAAGTCGCACGGTCGCAAGTGGTGGAATACGTTCTATGGCCTCCTGGG]

[+] EMBL CA756087             [ACACAAACACCTAGTAATTAATCAGAAGCTTGGGCAGCTTGGGTAGCAAGGCCATGGCTGTGGCGGTGGAGATCACACGGAGCGAGGTGCTCAGGCCGTCGGAGACGTTGGCGGCCGGCGGCGGCGGCAAGAGGAGCCAGCTCACCGTGTTCGACCGTGCAGCCATGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACGGCGCCGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCTGGCCAGGTACCCGCACCTCGCCGGGCGGTTCGACGTCGACGAGCGTGGCCGGAGGTGCTTCAACCTCAACGACGCCGGTGTGAGGGTCCTCGAGGCCACCGTCGCCGCCGACCTCGCCGACGCCCTCGCGCACGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGAGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCTCCCGACGCCGGTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGGCCGCCGGTGCCGGCGTTCGACCACCGGAACATCGAGGTCTAGGGCGAGAACAGTTGGACCCACTCCTACGGCTTCCTTCCCCCTGGAGAGGATCAGGAACCTTCCCCGTCTCTTTCCCGGACGAATTTCGTCCCCGGGGCTCAAGTCGCACGGTCGCAAGTGGTGGAATACGTTCTATGGCCTCCTGGG]




>consensus_10938#2
ACACAAACACCTAGTAATTAATCAGAAGCTTGGGCAGCTTGGGTAGCAAGGCCATGGCTG
TGGCGGTGGAGATCACACGGAGCGAGGTGCTCAGGCCGTCGGAGACGTTGGCGGCCGGCG
GCGGCGGCAAGAGGAGCCAGCTCACCGTGTTCGACCGTGCAGCCATGGACTGGTACATCC
CGGCCGTCTTCGCGTGGTACGGCGCCGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCC
TCGCCGCCGTGCTGGCCAGGTACCCGCACCTCGCCGGGCGGTTCGACGTCGACGAGCGTG
GCCGGAGGTGCTTCAACCTCAACGACGCCGGTGTGAGGGTCCTCGAGGCCACCGTCGCCG
CCGACCTCGCCGACGCCCTCGCGCACGACGTCGCCGCTCACGTCAACGAGCTCTACCCCA
AGGCCGACATGGAGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCGGTACGCGT
GCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCAGTCCATGA
GCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCTCCCGACGC
CGGTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGGCCGCCGGTGCCGGCGTTCGACC
ACCGGAACATCGAGGTCTAGGGCGAGAACAGTTGGACCCACTCCTACGGCTTCCTTCCCC
CTGGAGAGGATCAGGAACCTTCCCCGTCTCTTTCCCGGACGAATTTCGTCCCCGGGGCTC
AAGTCGCACGGTCGCAAGTGGTGGAATACGTTCTATGGCCTCCTGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10938#0      ATACAACCATCTGCTATAGCCAAGCTAATTAATTAACCTAAGCTAGTAATTAATCTGAAG 60
consensus_10938#2      ------------------------------ACACAAAC--ACCTAGTAATTAATCAGAAG 28
consensus_10938#1      ----------------------------------------AGCTACTAATTAATCTGAAG 20
                                                               * *** ********* ****

consensus_10938#0      CTTGGGTA--------AGCTAGGCCATGGCGGTGGCGGTGGAGATCACACGGAGCGAGGT 112
consensus_10938#2      CTTGGGCAGCTTGGGTAGCAAGGCCATGGCTGTGGCGGTGGAGATCACACGGAGCGAGGT 88
consensus_10938#1      CTTGGGTA--------AGCTAGGCCATGGCGGTGGCGGTGGAGATCACACGGAGCGAGGT 72
                       ****** *        *** ********** *****************************

consensus_10938#0      GCTCAGGCCGTCGGAGGCGTCGGCCGCCGGCGGCGGCGGCGGCAAGAGGAGCCCGCTCAC 172
consensus_10938#2      GCTCAGGCCGTCGGAGACGTTGGCGGCCGGCGGCGGCGG---CAAGAGGAGCCAGCTCAC 145
consensus_10938#1      GCTCAGGCCGTCGGAGGCGTCAGCCGCCGGCGGCGGCGGCGGCAAGAGGAGCCCGCTCAC 132
                       **************** ***  ** **************   *********** ******

consensus_10938#0      CGTGTTCGACCGTGCGGCCACGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACGGCGC 232
consensus_10938#2      CGTGTTCGACCGTGCAGCCATGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACGGCGC 205
consensus_10938#1      CGTGTTCGACCGTGCGGCCACGGACTGGTACATCCCGGCCGTCTTCGCGTGGTACGGCGC 192
                       *************** **** ***************************************

consensus_10938#0      CGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCTGGCCAGGTACCC 292
consensus_10938#2      CGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCTGGCCAGGTACCC 265
consensus_10938#1      CGCGGCGCCGTCCAACGACGAGGTTAAGGGCGGCCTCGCCGCCGTGCTGGCCAGGTACCC 252
                       ************************************************************

consensus_10938#0      GCACCTCGCCGGGCGGTTCGACGTCGACGAGCGTGGCCGGAGGTGCTTCAACCTCAACGA 352
consensus_10938#2      GCACCTCGCCGGGCGGTTCGACGTCGACGAGCGTGGCCGGAGGTGCTTCAACCTCAACGA 325
consensus_10938#1      GCACCTCGCCGGGCGGTTCGACGTCAACGAGCGTGGCCGGAGGTGCTTCAACCTCAACGA 312
                       ************************* **********************************

consensus_10938#0      CGCCGGTGTGAGGGTCCTCGAGGCCACCGTCGCCGCCGACCTCGCCGACGCCCTCGCGCA 412
consensus_10938#2      CGCCGGTGTGAGGGTCCTCGAGGCCACCGTCGCCGCCGACCTCGCCGACGCCCTCGCGCA 385
consensus_10938#1      CGCCGGTGTGAGGGTCCTCTAGGCCACCGTCGCCGCCGACCTCGCCGACGCCCTCGCGCA 372
                       ******************* ****************************************

consensus_10938#0      CGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGG------------- 459
consensus_10938#2      CGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGG------------- 432
consensus_10938#1      CGACGTCGCCGCTCACGTCAACGAGCTCTACCCCAAGGCCGACATGGTGTATACATAGCT 432
                       ***********************************************             

consensus_10938#0      ------------------------------------------------------------
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      AGATATAGCAACGTGACATGTTCAATTATGGAATTAATTGTACGTGTTTTTTGACACGTG 492
                                                                                   

consensus_10938#0      --------------------AGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCG 499
consensus_10938#2      --------------------AGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCG 472
consensus_10938#1      TGTTTTGCATATGTTGCAGGAGAACGGCGACGAGGCGGTGTTCCAGGTGCAGCTGACGCG 552
                                           ****************************************

consensus_10938#0      GTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCA 559
consensus_10938#2      GTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCA 532
consensus_10938#1      GTACGCGTGCGGCGGGCTGGTGATCGGCACGGCGTGCAACCACCAGGTCTCCGACGGCCA 612
                       ************************************************************

consensus_10938#0      GTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCT 619
consensus_10938#2      GTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCT 592
consensus_10938#1      GTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTGCGCAGCGCCGGCGCGACCCT 672
                       ************************************************************

consensus_10938#0      CCCGACGCCGTTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGCCCGCCGGCGCCGGC 679
consensus_10938#2      CCCGACGCCGGTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGGCCGCCGGTGCCGGC 652
consensus_10938#1      CCCGACGCCGTTCGTCGACCGCGCCGCCATCGCGGTGCCCCGCGGCCCGCCGGCGCCGGC 732
                       ********** ********************************** ******* ******

consensus_10938#0      GTTCGACCACCGGAACATCGAGTTCAAGGGCGAGAACAGCTGGACCCACTCCTACGGCTC 739
consensus_10938#2      GTTCGACCACCGGAACATCGAGGTCTAGGGCGAGAACAGTTGGACCCACTCCTACGGCTT 712
consensus_10938#1      GTTCGACCACCGGAACATCGAGTTCAAGGGCGAGAACAGCTGGACCCACTCCTACGGCTC 792
                       ********************** ** ************* ******************* 

consensus_10938#0      CCT-CCCCCTGGAGAGGATCAGGAACCT-CGCCGTCCACTTCCCGGACGAGTT-CGTCGC 796
consensus_10938#2      CCTTCCCCCTGGAGAGGATCAGGAACCTTCCCCGTCTCTTTCCCGGACGAATTTCGTCCC 772
consensus_10938#1      CCT-CCCCCTGGAGAGGATCAGGAACCT-CGCCGTCCACTTCCCGGACGAGTT-CGTCGC 849
                       *** ************************ * *****   *********** ** **** *

consensus_10938#0      CGGC-CTCAAGTCCCACGTCGGCACGCGGTGCAGCACGTTCCAGTGCCTCCTGGCGCACG 855
consensus_10938#2      CGGGGCTCAAGTCGCACGGTCGCAAGTGGTGGAATACGTTCTATGGCCTCCTGGG----- 827
consensus_10938#1      CGGC-CTCAAGTCCCACGTCGGCACGCGGTGCAGCACGTTCCAGTGCCTCCTGGCGCACG 908
                       ***  ******** ****   *** * **** *  ****** *  *********      

consensus_10938#0      CGTGGAAGAAGATCACGGCGGCGCGCGACCTTTCGCCGGAGGAGTACACGCAGGTGAGGG 915
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      CGTGGAAGAAGATCACGGCGGCGCGCGACCTTTCGCCGGAGGAGTACACGCAGGTGAGGG 968
                                                                                   

consensus_10938#0      TCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGGACTACTTTGGCAACA 975
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      TCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATGGACTACTTTGGCAACA 1028
                                                                                   

consensus_10938#0      TGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCTCCGCCAGCTACGCCA 1035
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      TGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTCTCCGCCAGCTACGCCA 1088
                                                                                   

consensus_10938#0      CGGTGGTCGGCGTCATCCGCGAGGCCGTGGCGCGCGTCGACGAGCAGTACATCCAGTCGT 1095
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      CGGTGGTCGGCGTCATCCGCGA-------------------------------------- 1110
                                                                                   

consensus_10938#0      TCGTGGACTTCGGGGAGGTGGCCGTCGGCGACGAGCTGACGCCGACAGCGGCGCCGCCGG 1155
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      ------------------------------------------------------------
                                                                                   

consensus_10938#0      GCACGGTGTTCTGCCCGGACCTGGAGGTGGACAGCTGGCTAGGGTTCAGGTTCCACGACC 1215
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      ------------------------------------------------------------
                                                                                   

consensus_10938#0      TCGACTTCGGCCGTGGCCCGCCGTGCGCGTTCCTGCCGCCGGACCTGCCCGTCGAGGGGA 1275
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      ------------------------------------------------------------
                                                                                   

consensus_10938#0      TGCTCATCTTCGTGCCGTCGTGCGCGGCGAAGGGCGGCGTCGAGATGTACATGGCGCTCG 1335
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      ------------------------------------------------------------
                                                                                   

consensus_10938#0      ACGACCTCCACGTCGACGCTTTCAGGCAAATCTGCTACTCCATGGACTGATCACGACTGT 1395
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      ------------------------------------------------------------
                                                                                   

consensus_10938#0      CACAAAAATATTACTCCTATGTGTACCATATTGTTAGTTTGTTACAAGTACAACAACAGC 1455
consensus_10938#2      ------------------------------------------------------------
consensus_10938#1      ------------------------------------------------------------
                                                                                   

consensus_10938#0      GTGCATATTTGCAAGATTATCCAGCTGCCAAAAAAAAAAAAAAAAGA 1502
consensus_10938#2      -----------------------------------------------
consensus_10938#1      -----------------------------------------------